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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0016
         (715 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64599-6|AAL11464.1|  284|Caenorhabditis elegans Unidentified vi...   136   1e-32
U64599-5|AAM69110.1|  303|Caenorhabditis elegans Unidentified vi...   136   1e-32
U64599-4|AAB04562.1|  429|Caenorhabditis elegans Unidentified vi...   136   1e-32
Z82052-1|CAB04823.1|  300|Caenorhabditis elegans Hypothetical pr...   128   4e-30
AL132862-24|CAB60560.1|  173|Caenorhabditis elegans Hypothetical...    80   2e-15
AF038621-1|AAB94141.4|   89|Caenorhabditis elegans Hypothetical ...    50   1e-06
Z72514-9|CAA96680.3|  449|Caenorhabditis elegans Hypothetical pr...    47   2e-05
Z68001-3|CAO78709.1|  449|Caenorhabditis elegans Hypothetical pr...    47   2e-05

>U64599-6|AAL11464.1|  284|Caenorhabditis elegans Unidentified
           vitellogenin-linkedtranscript protein 5, isoform b
           protein.
          Length = 284

 Score =  136 bits (329), Expect = 1e-32
 Identities = 57/86 (66%), Positives = 71/86 (82%)
 Frame = +1

Query: 256 DVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELS 435
           DV +S D+ +L L++RP+LG+TFTK+HCW LTQY KCVFLDAD LV++N DELF R + S
Sbjct: 61  DVFNSNDSDNLRLIERPDLGVTFTKLHCWRLTQYTKCVFLDADTLVLRNADELFTRPDFS 120

Query: 436 AAPDVGWPDCFNSGVFVFKPSNETSR 513
           AA D+GWPD FNSGVFV+ P+NET R
Sbjct: 121 AASDIGWPDSFNSGVFVYVPNNETYR 146



 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 28/56 (50%), Positives = 36/56 (64%)
 Frame = +2

Query: 80  NRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEV 247
           + AW+TLATND+Y  GALVL HSLR AG+      LI+  VS  +R +L   F +V
Sbjct: 2   SEAWITLATNDNYAQGALVLVHSLRTAGTTRKIHCLISNEVSAPVRKQLEEHFDDV 57



 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 23/38 (60%), Positives = 27/38 (71%)
 Frame = +2

Query: 539 GSFDGGDQGLLNSFFSDWAHGDINKHLPFLYNVTTAAF 652
           GS+DGGDQGLLN FFS+W        LPF+YN+T  AF
Sbjct: 156 GSYDGGDQGLLNDFFSNWRDLPSEHRLPFIYNMTAGAF 193


>U64599-5|AAM69110.1|  303|Caenorhabditis elegans Unidentified
           vitellogenin-linkedtranscript protein 5, isoform c
           protein.
          Length = 303

 Score =  136 bits (329), Expect = 1e-32
 Identities = 57/86 (66%), Positives = 71/86 (82%)
 Frame = +1

Query: 256 DVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELS 435
           DV +S D+ +L L++RP+LG+TFTK+HCW LTQY KCVFLDAD LV++N DELF R + S
Sbjct: 61  DVFNSNDSDNLRLIERPDLGVTFTKLHCWRLTQYTKCVFLDADTLVLRNADELFTRPDFS 120

Query: 436 AAPDVGWPDCFNSGVFVFKPSNETSR 513
           AA D+GWPD FNSGVFV+ P+NET R
Sbjct: 121 AASDIGWPDSFNSGVFVYVPNNETYR 146



 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 28/56 (50%), Positives = 36/56 (64%)
 Frame = +2

Query: 80  NRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEV 247
           + AW+TLATND+Y  GALVL HSLR AG+      LI+  VS  +R +L   F +V
Sbjct: 2   SEAWITLATNDNYAQGALVLVHSLRTAGTTRKIHCLISNEVSAPVRKQLEEHFDDV 57



 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 23/38 (60%), Positives = 27/38 (71%)
 Frame = +2

Query: 539 GSFDGGDQGLLNSFFSDWAHGDINKHLPFLYNVTTAAF 652
           GS+DGGDQGLLN FFS+W        LPF+YN+T  AF
Sbjct: 156 GSYDGGDQGLLNDFFSNWRDLPSEHRLPFIYNMTAGAF 193


>U64599-4|AAB04562.1|  429|Caenorhabditis elegans Unidentified
           vitellogenin-linkedtranscript protein 5, isoform a
           protein.
          Length = 429

 Score =  136 bits (329), Expect = 1e-32
 Identities = 57/86 (66%), Positives = 71/86 (82%)
 Frame = +1

Query: 256 DVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELS 435
           DV +S D+ +L L++RP+LG+TFTK+HCW LTQY KCVFLDAD LV++N DELF R + S
Sbjct: 61  DVFNSNDSDNLRLIERPDLGVTFTKLHCWRLTQYTKCVFLDADTLVLRNADELFTRPDFS 120

Query: 436 AAPDVGWPDCFNSGVFVFKPSNETSR 513
           AA D+GWPD FNSGVFV+ P+NET R
Sbjct: 121 AASDIGWPDSFNSGVFVYVPNNETYR 146



 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 28/56 (50%), Positives = 36/56 (64%)
 Frame = +2

Query: 80  NRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEV 247
           + AW+TLATND+Y  GALVL HSLR AG+      LI+  VS  +R +L   F +V
Sbjct: 2   SEAWITLATNDNYAQGALVLVHSLRTAGTTRKIHCLISNEVSAPVRKQLEEHFDDV 57



 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 23/38 (60%), Positives = 27/38 (71%)
 Frame = +2

Query: 539 GSFDGGDQGLLNSFFSDWAHGDINKHLPFLYNVTTAAF 652
           GS+DGGDQGLLN FFS+W        LPF+YN+T  AF
Sbjct: 156 GSYDGGDQGLLNDFFSNWRDLPSEHRLPFIYNMTAGAF 193


>Z82052-1|CAB04823.1|  300|Caenorhabditis elegans Hypothetical
           protein T25E12.5 protein.
          Length = 300

 Score =  128 bits (309), Expect = 4e-30
 Identities = 53/81 (65%), Positives = 66/81 (81%)
 Frame = +1

Query: 256 DVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELS 435
           D+ +S D+ +L+L+ RP+LG+TFTK HCW LTQY K VFLDAD ++I+N DELFER + S
Sbjct: 61  DIFNSNDSENLSLIGRPDLGVTFTKFHCWRLTQYSKAVFLDADTMIIRNSDELFERPDFS 120

Query: 436 AAPDVGWPDCFNSGVFVFKPS 498
           AA D+GWPD FNSGVFVF PS
Sbjct: 121 AAADIGWPDMFNSGVFVFTPS 141



 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 22/38 (57%), Positives = 26/38 (68%)
 Frame = +2

Query: 539 GSFDGGDQGLLNSFFSDWAHGDINKHLPFLYNVTTAAF 652
           GSFDGGDQGLLN +FS+W        LPF+YN+T   F
Sbjct: 156 GSFDGGDQGLLNEYFSNWRDLPSAHRLPFIYNMTAGEF 193



 Score = 51.2 bits (117), Expect = 7e-07
 Identities = 25/54 (46%), Positives = 34/54 (62%)
 Frame = +2

Query: 86  AWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEV 247
           AW+TLATND Y  GAL L +SL  +G+      LIT  +S ++R++L   F EV
Sbjct: 4   AWITLATNDRYAQGALTLLNSLHASGTTRRIHCLITNEISNSVREKLVNKFDEV 57


>AL132862-24|CAB60560.1|  173|Caenorhabditis elegans Hypothetical
           protein Y73F8A.31 protein.
          Length = 173

 Score = 79.8 bits (188), Expect = 2e-15
 Identities = 41/81 (50%), Positives = 52/81 (64%)
 Frame = +1

Query: 256 DVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELS 435
           D  +S D+ +L+L+ RP+L                  VFLDAD ++I+NCDELFER + S
Sbjct: 59  DFFNSNDSENLSLIGRPDLA-----------------VFLDADTMIIRNCDELFERPDFS 101

Query: 436 AAPDVGWPDCFNSGVFVFKPS 498
           AA D+GWPD FNSGVFVF PS
Sbjct: 102 AAADIGWPDMFNSGVFVFTPS 122



 Score = 44.4 bits (100), Expect = 8e-05
 Identities = 19/34 (55%), Positives = 23/34 (67%)
 Frame = +2

Query: 539 GSFDGGDQGLLNSFFSDWAHGDINKHLPFLYNVT 640
           GSFD GDQGLL  +FS+W        LPF+YN+T
Sbjct: 137 GSFDDGDQGLLIEYFSNWNDLSSAHRLPFIYNMT 170


>AF038621-1|AAB94141.4|   89|Caenorhabditis elegans Hypothetical
           protein M116.2 protein.
          Length = 89

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 21/38 (55%), Positives = 26/38 (68%)
 Frame = +2

Query: 539 GSFDGGDQGLLNSFFSDWAHGDINKHLPFLYNVTTAAF 652
           GSFDG DQGLLN++FS+W        LPF+YN+T   F
Sbjct: 27  GSFDGRDQGLLNAYFSNWRDLSSAHRLPFIYNMTAGEF 64


>Z72514-9|CAA96680.3|  449|Caenorhabditis elegans Hypothetical
           protein T10B10.8 protein.
          Length = 449

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 27/62 (43%), Positives = 36/62 (58%)
 Frame = +1

Query: 322 FTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWPDCFNSGVFVFKPSN 501
           +TKI  W +T+++  V LD DIL  ++   LFE     A+      D FNSGVFV K +N
Sbjct: 99  YTKIRLWAMTEFDVIVHLDLDILPTRDISTLFECGSFCAS--FRHSDMFNSGVFVLK-TN 155

Query: 502 ET 507
           ET
Sbjct: 156 ET 157



 Score = 33.1 bits (72), Expect = 0.20
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = +2

Query: 542 SFDGGDQGLLNSFFSD 589
           S+DGGDQG LN++FSD
Sbjct: 171 SYDGGDQGFLNTYFSD 186


>Z68001-3|CAO78709.1|  449|Caenorhabditis elegans Hypothetical
           protein T10B10.8 protein.
          Length = 449

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 27/62 (43%), Positives = 36/62 (58%)
 Frame = +1

Query: 322 FTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWPDCFNSGVFVFKPSN 501
           +TKI  W +T+++  V LD DIL  ++   LFE     A+      D FNSGVFV K +N
Sbjct: 99  YTKIRLWAMTEFDVIVHLDLDILPTRDISTLFECGSFCAS--FRHSDMFNSGVFVLK-TN 155

Query: 502 ET 507
           ET
Sbjct: 156 ET 157



 Score = 33.1 bits (72), Expect = 0.20
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = +2

Query: 542 SFDGGDQGLLNSFFSD 589
           S+DGGDQG LN++FSD
Sbjct: 171 SYDGGDQGFLNTYFSD 186


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,348,886
Number of Sequences: 27780
Number of extensions: 302171
Number of successful extensions: 897
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 895
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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