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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0029
         (676 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49131-3|CAA88976.1| 1211|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z22181-5|CAA80183.1|  619|Caenorhabditis elegans Hypothetical pr...    28   5.3  
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr...    28   7.0  
AF067608-11|AAC17656.2|  368|Caenorhabditis elegans Hypothetical...    28   7.0  
Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical pr...    27   9.2  
Z66515-13|CAA91355.1|  184|Caenorhabditis elegans Hypothetical p...    27   9.2  
Z48638-11|CAA88572.1|  184|Caenorhabditis elegans Hypothetical p...    27   9.2  
AL021448-1|CAA16276.2|  898|Caenorhabditis elegans Hypothetical ...    27   9.2  
AF233290-1|AAF62516.1|  898|Caenorhabditis elegans maternal-effe...    27   9.2  

>Z49131-3|CAA88976.1| 1211|Caenorhabditis elegans Hypothetical protein
            ZC373.4 protein.
          Length = 1211

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = +2

Query: 44   QEFDSKNSEVV-KKEIDAVLPTDVKVTTEHITKEQIVSPVIEKESR-IENKAEEPV 205
            Q+ D K S+V  KKE D+  P       +++ K+       EKE +  ENK +E +
Sbjct: 898  QKDDVKVSQVTTKKEEDSTQPAPTLTVKKNVVKQTAEKSTSEKEHKTTENKEQERI 953


>Z22181-5|CAA80183.1|  619|Caenorhabditis elegans Hypothetical
           protein ZK632.6 protein.
          Length = 619

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = +2

Query: 257 GSDSIEISQEQRTDTEKSIADTDSSSLSHYVDLPKSPLADSP-KPTEELLEKPVEDTG 427
           GS S    Q++  + E+  A++  SS +   D       + P KPTEE  +K  ++TG
Sbjct: 551 GSQSNPEPQDEEENAEQQSANSSQSSAAEEEDDEHVVPENEPVKPTEEFAKKSPKNTG 608


>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
            F45E4.4 protein.
          Length = 2361

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 31/132 (23%), Positives = 54/132 (40%), Gaps = 10/132 (7%)
 Frame = +2

Query: 53   DSKNSEVVKKEIDAVLPTDVKVTTEHITKEQIVSPVIEKESRIENKAEEPVXXXXXXXXX 232
            DS++  + ++E D  + T  + +T  +T    VSPV E    +  K  +           
Sbjct: 1719 DSRDEVLHRREEDPEVHTPEESSTAVVTDVPSVSPVTEN---VPEKQTDDFDFTYSDSRF 1775

Query: 233  XXXXXXXXGSDSIEISQEQRTDTE----KSIADTDSSSLSHYVDLPKSPLA------DSP 382
                      ++  + Q+Q+ D +    +++ D D S L H   +   P        D P
Sbjct: 1776 AEIVQMQEEEEAGSL-QKQKVDEKPRMWETVFDGDESELPHQDFVFNEPTTKKTSDFDFP 1834

Query: 383  KPTEELLEKPVE 418
            K T+E+ EKP E
Sbjct: 1835 KETDEVFEKPSE 1846


>AF067608-11|AAC17656.2|  368|Caenorhabditis elegans Hypothetical
           protein B0511.11 protein.
          Length = 368

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +2

Query: 47  EFDSKNSEVVKKEIDAVLPTDVKVTTEHITKEQIVSP 157
           EF+   S+V +KEI  + P  +KV  +H   E+ ++P
Sbjct: 146 EFEKMTSDVDEKEILKLAPRLLKVAKKHAAIEKCLTP 182


>Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical
           protein E02A10.2 protein.
          Length = 385

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 18/50 (36%), Positives = 23/50 (46%)
 Frame = +2

Query: 53  DSKNSEVVKKEIDAVLPTDVKVTTEHITKEQIVSPVIEKESRIENKAEEP 202
           + K  EV KKE D     D +   E   KE+     +EK+   E K EEP
Sbjct: 297 EEKKEEVEKKEEDE--KKDEEPKKEEEKKEEEQKEEVEKKEEEEKKDEEP 344


>Z66515-13|CAA91355.1|  184|Caenorhabditis elegans Hypothetical
           protein R53.8 protein.
          Length = 184

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 22/92 (23%), Positives = 34/92 (36%), Gaps = 5/92 (5%)
 Frame = +2

Query: 158 VIEKESRI-----ENKAEEPVXXXXXXXXXXXXXXXXXGSDSIEISQEQRTDTEKSIADT 322
           V EKES+I     + + ++PV                   +  E + +Q+ D EK   D 
Sbjct: 89  VFEKESKIVKLKAKGELKKPVIVSIKDKKNGNSVKVMVKVEDQESADQQKKDQEKKEQDG 148

Query: 323 DSSSLSHYVDLPKSPLADSPKPTEELLEKPVE 418
           D        + PK    D PK   ++  K  E
Sbjct: 149 DKKDKEKVSEKPKEQPEDQPKDVPKVENKDKE 180


>Z48638-11|CAA88572.1|  184|Caenorhabditis elegans Hypothetical
           protein R53.8 protein.
          Length = 184

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 22/92 (23%), Positives = 34/92 (36%), Gaps = 5/92 (5%)
 Frame = +2

Query: 158 VIEKESRI-----ENKAEEPVXXXXXXXXXXXXXXXXXGSDSIEISQEQRTDTEKSIADT 322
           V EKES+I     + + ++PV                   +  E + +Q+ D EK   D 
Sbjct: 89  VFEKESKIVKLKAKGELKKPVIVSIKDKKNGNSVKVMVKVEDQESADQQKKDQEKKEQDG 148

Query: 323 DSSSLSHYVDLPKSPLADSPKPTEELLEKPVE 418
           D        + PK    D PK   ++  K  E
Sbjct: 149 DKKDKEKVSEKPKEQPEDQPKDVPKVENKDKE 180


>AL021448-1|CAA16276.2|  898|Caenorhabditis elegans Hypothetical
           protein Y2H9A.1 protein.
          Length = 898

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 13/48 (27%), Positives = 26/48 (54%)
 Frame = +2

Query: 287 QRTDTEKSIADTDSSSLSHYVDLPKSPLADSPKPTEELLEKPVEDTGS 430
           ++++   S   T S+S + +V     P++ + K  ++   +PV DTGS
Sbjct: 733 KKSEISPSKPSTSSASSTSFVQQASWPISQNKKNLKKNSNQPVADTGS 780


>AF233290-1|AAF62516.1|  898|Caenorhabditis elegans maternal-effect
           sterile 4 protein.
          Length = 898

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 13/48 (27%), Positives = 26/48 (54%)
 Frame = +2

Query: 287 QRTDTEKSIADTDSSSLSHYVDLPKSPLADSPKPTEELLEKPVEDTGS 430
           ++++   S   T S+S + +V     P++ + K  ++   +PV DTGS
Sbjct: 733 KKSEISPSKPSTSSASSTSFVQQASWPISQNKKNLKKNSNQPVADTGS 780


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,839,462
Number of Sequences: 27780
Number of extensions: 178956
Number of successful extensions: 826
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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