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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10a11
         (686 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66521-8|CAA91394.1|  281|Caenorhabditis elegans Hypothetical pr...   175   2e-44
Z66521-2|CAA91395.1|  312|Caenorhabditis elegans Hypothetical pr...   163   8e-41
AF242767-1|AAG36874.1|  258|Caenorhabditis elegans SF2 protein.       126   1e-29
AL132904-14|CAC35847.2|  258|Caenorhabditis elegans Hypothetical...   126   1e-29
Z66521-4|CAD59160.1|  150|Caenorhabditis elegans Hypothetical pr...   107   6e-24
Z66521-3|CAD59159.1|  148|Caenorhabditis elegans Hypothetical pr...   107   6e-24
U28738-11|AAK68399.3|  166|Caenorhabditis elegans Sr protein (sp...    91   7e-19
U28738-10|AAK72066.3|  208|Caenorhabditis elegans Sr protein (sp...    91   7e-19
U28738-9|AAA68314.3|  208|Caenorhabditis elegans Sr protein (spl...    91   7e-19
U41007-10|AAL32214.1|  118|Caenorhabditis elegans Sr protein (sp...    68   7e-12
U41007-9|AAL32213.1|  153|Caenorhabditis elegans Sr protein (spl...    68   7e-12
U41007-8|AAA82270.1|  179|Caenorhabditis elegans Sr protein (spl...    68   7e-12
AC024793-5|AAF60689.1|   79|Caenorhabditis elegans Hypothetical ...    51   7e-07
AC024826-10|AAM97977.1|  435|Caenorhabditis elegans Hypothetical...    49   3e-06
AC024826-8|AAF60795.2|  580|Caenorhabditis elegans Hypothetical ...    49   3e-06
U41531-7|AAA83161.2|  415|Caenorhabditis elegans Feminizing gene...    47   1e-05
U14946-1|AAA67723.1|  415|Caenorhabditis elegans ribonucleoprote...    47   1e-05
Z36238-3|CAA85276.1|  404|Caenorhabditis elegans Hypothetical pr...    46   3e-05
DQ485531-1|ABF22491.1|  404|Caenorhabditis elegans RNA-binding p...    46   3e-05
Z83230-6|CAB05746.1|  336|Caenorhabditis elegans Hypothetical pr...    44   8e-05
Z81108-1|CAB03236.1|   83|Caenorhabditis elegans Hypothetical pr...    44   8e-05
Z78536-3|CAB01717.2|  360|Caenorhabditis elegans Hypothetical pr...    44   8e-05
U97193-2|AAB52444.1|  137|Caenorhabditis elegans Hypothetical pr...    42   4e-04
AF106588-2|AAC78488.1|  137|Caenorhabditis elegans Hypothetical ...    42   4e-04
Z81108-4|CAB03237.1|   85|Caenorhabditis elegans Hypothetical pr...    42   5e-04
U39997-3|AAK68389.1|  498|Caenorhabditis elegans Human daz (dele...    42   5e-04
AB025253-1|BAA88577.1|  499|Caenorhabditis elegans DAZ-1 protein.      42   5e-04
Z36752-6|CAA85327.1|  456|Caenorhabditis elegans Hypothetical pr...    41   7e-04
AF098993-1|AAC67471.2|  367|Caenorhabditis elegans Zinc finger t...    41   0.001
U55363-5|AAA97963.1|  351|Caenorhabditis elegans Spindle orienta...    40   0.001
AB052819-1|BAC65239.1|  351|Caenorhabditis elegans PIP-1 protein.      40   0.001
Z81106-3|CAB03222.1|   84|Caenorhabditis elegans Hypothetical pr...    40   0.002
AF047662-1|AAC04442.1|  248|Caenorhabditis elegans Suppressor pr...    40   0.002
AL117204-22|CAB55151.1|  331|Caenorhabditis elegans Hypothetical...    39   0.004
AC024791-22|AAF60676.1|  339|Caenorhabditis elegans Rnp (rrm rna...    39   0.004
AC024791-21|AAF60666.1|  749|Caenorhabditis elegans Rnp (rrm rna...    39   0.004
AC024791-23|AAM81102.1|  346|Caenorhabditis elegans Rnp (rrm rna...    38   0.005
U21320-5|AAA62536.2|  332|Caenorhabditis elegans Rnp (rrm rna bi...    38   0.007
AC084197-11|AAM44397.1|  305|Caenorhabditis elegans Homologous t...    38   0.007
AC084197-10|AAY43984.1|  308|Caenorhabditis elegans Homologous t...    38   0.007
AC006833-6|AAF60950.1|  491|Caenorhabditis elegans Hypothetical ...    38   0.007
Z32683-11|CAA83626.1|  142|Caenorhabditis elegans Hypothetical p...    37   0.012
U79157-1|AAC26982.1|  496|Caenorhabditis elegans splicing factor...    37   0.012
U23484-3|AAK68298.1|  126|Caenorhabditis elegans Sr protein (spl...    37   0.012
U23484-2|AAC46767.1|  196|Caenorhabditis elegans Sr protein (spl...    37   0.012
U00052-10|AAK21429.2|  289|Caenorhabditis elegans Rnp (rrm rna b...    37   0.012
AC024875-3|AAK29989.1|  496|Caenorhabditis elegans U2af splicing...    37   0.012
AC024875-2|AAM44400.1|  471|Caenorhabditis elegans U2af splicing...    37   0.012
AC024875-1|AAL00879.1|  474|Caenorhabditis elegans U2af splicing...    37   0.012
Z81038-2|CAB02757.1|  454|Caenorhabditis elegans Hypothetical pr...    37   0.016
Z78019-5|CAB01455.1|  305|Caenorhabditis elegans Hypothetical pr...    37   0.016
U21302-2|AAA92287.1|  305|Caenorhabditis elegans RNP-1 protein.        37   0.016
Z46676-8|CAB60993.2|  388|Caenorhabditis elegans Hypothetical pr...    36   0.021
U28944-7|AAN63457.1|  295|Caenorhabditis elegans Hypothetical pr...    36   0.021
U28944-6|AAN63456.1|  305|Caenorhabditis elegans Hypothetical pr...    36   0.021
U28944-5|AAK68191.1|  408|Caenorhabditis elegans Hypothetical pr...    36   0.021
U28944-4|AAK68192.1|  376|Caenorhabditis elegans Hypothetical pr...    36   0.021
U24189-3|AAC47514.1|  398|Caenorhabditis elegans RRM-type RNA bi...    36   0.021
AL137227-1|CAB70238.2|  611|Caenorhabditis elegans Hypothetical ...    36   0.021
AF098501-6|AAL38960.1|  315|Caenorhabditis elegans Hypothetical ...    36   0.021
AF098501-5|AAM69104.1|  335|Caenorhabditis elegans Hypothetical ...    36   0.021
AF098501-4|AAL38959.1|  336|Caenorhabditis elegans Hypothetical ...    36   0.021
AL032631-4|CAE54917.1|  586|Caenorhabditis elegans Hypothetical ...    36   0.027
AL032631-3|CAE54916.1|  583|Caenorhabditis elegans Hypothetical ...    36   0.027
AL032631-2|CAA21572.1|  646|Caenorhabditis elegans Hypothetical ...    36   0.027
Z99279-4|CAB16494.1|  121|Caenorhabditis elegans Hypothetical pr...    36   0.036
Z92826-4|CAB07322.1|  309|Caenorhabditis elegans Hypothetical pr...    36   0.036
AL110485-8|CAB60356.1|  434|Caenorhabditis elegans Hypothetical ...    35   0.047
U24123-1|AAA65224.1|  646|Caenorhabditis elegans polyadenylate-b...    35   0.063
D10877-1|BAA01645.1|  346|Caenorhabditis elegans hnRNP like prot...    34   0.083
AF038613-6|ABB51186.1|  347|Caenorhabditis elegans Human hnrnp a...    34   0.083
AF038613-5|AAB92051.1|  346|Caenorhabditis elegans Human hnrnp a...    34   0.083
Z77669-6|CAB01243.2|  371|Caenorhabditis elegans Hypothetical pr...    33   0.14 
U23450-1|AAK31467.2|  422|Caenorhabditis elegans Cpeb polya bind...    33   0.14 
U23172-15|AAN63408.1|  374|Caenorhabditis elegans Hypothetical p...    33   0.19 
U23172-12|ABH03526.1|  562|Caenorhabditis elegans Hypothetical p...    33   0.19 
AC084197-23|AAM44389.1|  610|Caenorhabditis elegans Hypothetical...    33   0.19 
Z83119-2|CAB05579.2|  608|Caenorhabditis elegans Hypothetical pr...    33   0.25 
U23450-2|AAK31468.1|  302|Caenorhabditis elegans Hypothetical pr...    32   0.33 
AL032626-17|CAA21536.1|  282|Caenorhabditis elegans Hypothetical...    32   0.33 
Z35601-1|CAA84667.2|  320|Caenorhabditis elegans Hypothetical pr...    32   0.44 
AB036738-1|BAB13470.1|  320|Caenorhabditis elegans neural RNA-bi...    32   0.44 
Z50110-2|CAA90446.1|  566|Caenorhabditis elegans Hypothetical pr...    31   0.58 
Z50110-1|CAA90444.1|  692|Caenorhabditis elegans Hypothetical pr...    31   0.58 
Z81084-7|CAB03111.1|  312|Caenorhabditis elegans Hypothetical pr...    31   0.77 
Z81037-10|CAB02754.1|  312|Caenorhabditis elegans Hypothetical p...    31   0.77 
Z36238-4|CAD82915.1|  286|Caenorhabditis elegans Hypothetical pr...    31   0.77 
X95609-1|CAA64867.1|  312|Caenorhabditis elegans mec-8 protein.        31   0.77 
X95608-1|CAA64866.1|  312|Caenorhabditis elegans mec-8 protein.        31   0.77 
AF067616-7|AAM98029.1|  423|Caenorhabditis elegans Hypothetical ...    31   0.77 
AF067616-6|AAC19192.1|  520|Caenorhabditis elegans Hypothetical ...    31   0.77 
AF067616-5|AAU05574.1|  497|Caenorhabditis elegans Hypothetical ...    31   0.77 
Z81120-1|CAB03342.1|  207|Caenorhabditis elegans Hypothetical pr...    31   1.0  
U23484-11|AAC46764.2|  191|Caenorhabditis elegans Hypothetical p...    31   1.0  
AL033514-34|CAA22113.1|  463|Caenorhabditis elegans Hypothetical...    30   1.3  
AL033514-33|CAB54500.1|  480|Caenorhabditis elegans Hypothetical...    30   1.3  
AF160493-1|AAD43348.1|  465|Caenorhabditis elegans DNA-binding p...    30   1.3  
AF160492-1|AAD43347.1|  463|Caenorhabditis elegans DNA-binding p...    30   1.3  
AC024818-2|AAF60781.1|  302|Caenorhabditis elegans Temporarily a...    30   1.3  
Z81473-3|CAB03896.4|  514|Caenorhabditis elegans Hypothetical pr...    30   1.8  
U23484-10|AAC46772.1|  197|Caenorhabditis elegans Hypothetical p...    30   1.8  
AY342388-1|AAQ19851.1|  514|Caenorhabditis elegans putative RNA-...    30   1.8  
Z83127-4|CAB05631.1|  872|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z35663-4|CAA84724.1|  307|Caenorhabditis elegans Hypothetical pr...    29   2.4  
U80455-2|AAB37882.2|  420|Caenorhabditis elegans Elav-type rna b...    29   2.4  
U80455-1|AAB37881.1|  584|Caenorhabditis elegans Elav-type rna b...    29   2.4  
U53931-1|AAA98566.1|  584|Caenorhabditis elegans elav-type ribon...    29   2.4  
EF523770-1|ABS18836.1|  513|Caenorhabditis elegans ELAV-type RNA...    29   2.4  
EF523766-1|ABS18832.1|  584|Caenorhabditis elegans ELAV-type RNA...    29   2.4  
AF099918-1|AAK29840.2|  820|Caenorhabditis elegans Hypothetical ...    29   2.4  
Z77654-1|CAB01127.1|  114|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z50176-3|CAA90540.1|  196|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z97628-2|CAB10726.2|  427|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z81080-5|CAB03088.2|  427|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z81080-2|CAD56584.1|  358|Caenorhabditis elegans Hypothetical pr...    28   5.4  
AJ297847-1|CAC16732.1|  619|Caenorhabditis elegans FOG-1 protein...    28   7.2  
AJ297846-1|CAC16731.1|  619|Caenorhabditis elegans FOG-1 protein...    28   7.2  
AC024810-12|AAK68519.1|  619|Caenorhabditis elegans Feminization...    28   7.2  
Z66512-2|CAA91323.1|  387|Caenorhabditis elegans Hypothetical pr...    27   9.5  
Z19154-9|CAA79552.2|  559|Caenorhabditis elegans Hypothetical pr...    27   9.5  
AF038613-8|AAL02515.2|  309|Caenorhabditis elegans Human hnrnp a...    27   9.5  
AF038613-7|ABB51185.1|  308|Caenorhabditis elegans Human hnrnp a...    27   9.5  

>Z66521-8|CAA91394.1|  281|Caenorhabditis elegans Hypothetical
           protein W02B12.2 protein.
          Length = 281

 Score =  175 bits (426), Expect = 2e-44
 Identities = 81/178 (45%), Positives = 124/178 (69%), Gaps = 6/178 (3%)
 Frame = +2

Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYRDADDAVYELNGKELLG 343
           RVY+G LP    +RD+E FF+G+G++ D+++KNG+GFV+F+D RDADDAV++LNGKEL G
Sbjct: 3   RVYIGRLPNRASDRDVEHFFRGYGKLSDVIMKNGFGFVDFQDQRDADDAVHDLNGKELCG 62

Query: 344 ERVVVE-PARGI----DRSADRYRRGDRHXXXXXXXXXXXXXXPPTRTEYRLIVENLSSR 508
           ERV++E P R +    +RS   +R  +                 P  T +RL+++NLS+R
Sbjct: 63  ERVILEFPRRKVGYNEERSGSGFRGREPTFRKGGERQFSNRYSRPCSTRFRLVIDNLSTR 122

Query: 509 ISWQDLKDYMRQAG-EVTYADAHKQHRNEGVVEFATHSDMRAAIEKLDGTELNGRRVR 679
            SWQD+KD++R+ G E TY++AHK++ N+ +V F +H D+R A+ KL G +LNGR+++
Sbjct: 123 YSWQDIKDHIRKLGIEPTYSEAHKRNVNQAIVCFTSHDDLRDAMNKLQGEDLNGRKLK 180


>Z66521-2|CAA91395.1|  312|Caenorhabditis elegans Hypothetical
           protein W02B12.3a protein.
          Length = 312

 Score =  163 bits (397), Expect = 8e-41
 Identities = 90/199 (45%), Positives = 129/199 (64%), Gaps = 22/199 (11%)
 Frame = +2

Query: 155 VGSRVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYRDADDAVYELNGKE 334
           + +R+Y+G L   V E+D+E FF+G+G+IRD+L+KNG+GFVEF+D RDA+DAV++LNGKE
Sbjct: 1   MAARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKE 60

Query: 335 LLGERVVVEPARGIDRSADR--YRRGDR----------HXXXXXXXXXXXXXXPPTR--- 469
           L GERV+++ ++      DR  +  G R                         PP R   
Sbjct: 61  LGGERVILDYSKPRGGGGDRGGFGGGGRGGARVSSYSGGGGGGRDRFDRYDRGPPRRESR 120

Query: 470 ------TEYRLIVENLSSRISWQDLKDYMRQAG-EVTYADAHKQHRNEGVVEFATHSDMR 628
                 T +R++VENLSSRISWQDLKD +R+ G E TYA+AHK+  NE ++ FAT SD++
Sbjct: 121 YGRPYSTRHRVVVENLSSRISWQDLKDQVRRQGVEPTYAEAHKR-PNEALLCFATPSDLK 179

Query: 629 AAIEKLDGTELNGRRVRLV 685
             IEK DG +LNGR+++++
Sbjct: 180 RCIEKCDGMDLNGRKIKMI 198


>AF242767-1|AAG36874.1|  258|Caenorhabditis elegans SF2 protein.
          Length = 258

 Score =  126 bits (305), Expect = 1e-29
 Identities = 77/174 (44%), Positives = 99/174 (56%), Gaps = 9/174 (5%)
 Frame = +2

Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYG----FVEFEDYRDADDAVYELNGK 331
           +VYVG LP  VRE+++E  F  +GRI+ + IK+G G    FVEFED+RDA+DAV   +G 
Sbjct: 10  KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGY 69

Query: 332 ELLGERVVVEPARGIDRSADRYRR----GD-RHXXXXXXXXXXXXXXPPTRTEYRLIVEN 496
           E  G R+ VE  RG+       R     GD R               P  RT YR+IVE 
Sbjct: 70  EFDGRRIRVEFTRGVGPRGPSGRPLQDGGDHRGGDFRGGRGGGRGGGPQRRTGYRVIVEG 129

Query: 497 LSSRISWQDLKDYMRQAGEVTYADAHKQHRNEGVVEFATHSDMRAAIEKLDGTE 658
           L    SWQDLKD+MR AG+V YAD  +     GVVEF  + D++ A+ KLD T+
Sbjct: 130 LPPTGSWQDLKDHMRDAGDVCYADVARD--GTGVVEFTRYEDVKYAVRKLDDTK 181



 Score = 40.3 bits (90), Expect = 0.001
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
 Frame = +2

Query: 473 EYRLIVENLSSRISWQDLKDYMRQAGEVTYADAHKQHRNEGV--VEFATHSDMRAAIEKL 646
           + ++ V NL   +  ++++D   + G + Y D  K  R      VEF  H D   A+   
Sbjct: 8   DQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDI-KSGRGPAFAFVEFEDHRDAEDAVRAR 66

Query: 647 DGTELNGRRVRL 682
           DG E +GRR+R+
Sbjct: 67  DGYEFDGRRIRV 78


>AL132904-14|CAC35847.2|  258|Caenorhabditis elegans Hypothetical
           protein Y111B2A.18 protein.
          Length = 258

 Score =  126 bits (304), Expect = 1e-29
 Identities = 77/174 (44%), Positives = 99/174 (56%), Gaps = 9/174 (5%)
 Frame = +2

Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYG----FVEFEDYRDADDAVYELNGK 331
           +VYVG LP  VRE+++E  F  +GRI+ + IK+G G    FVEFED+RDA+DAV   +G 
Sbjct: 10  KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGY 69

Query: 332 ELLGERVVVEPARGIDRSADRYRR----GD-RHXXXXXXXXXXXXXXPPTRTEYRLIVEN 496
           E  G R+ VE  RG+       R     GD R               P  RT YR+IVE 
Sbjct: 70  EFDGRRIRVEFTRGVGPRGPGGRPLQDGGDHRGGDFRGGRGGGRGGGPQRRTGYRVIVEG 129

Query: 497 LSSRISWQDLKDYMRQAGEVTYADAHKQHRNEGVVEFATHSDMRAAIEKLDGTE 658
           L    SWQDLKD+MR AG+V YAD  +     GVVEF  + D++ A+ KLD T+
Sbjct: 130 LPPTGSWQDLKDHMRDAGDVCYADVARD--GTGVVEFTRYEDVKYAVRKLDDTK 181



 Score = 40.3 bits (90), Expect = 0.001
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
 Frame = +2

Query: 473 EYRLIVENLSSRISWQDLKDYMRQAGEVTYADAHKQHRNEGV--VEFATHSDMRAAIEKL 646
           + ++ V NL   +  ++++D   + G + Y D  K  R      VEF  H D   A+   
Sbjct: 8   DQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDI-KSGRGPAFAFVEFEDHRDAEDAVRAR 66

Query: 647 DGTELNGRRVRL 682
           DG E +GRR+R+
Sbjct: 67  DGYEFDGRRIRV 78


>Z66521-4|CAD59160.1|  150|Caenorhabditis elegans Hypothetical
           protein W02B12.3c protein.
          Length = 150

 Score =  107 bits (258), Expect = 6e-24
 Identities = 63/150 (42%), Positives = 88/150 (58%), Gaps = 21/150 (14%)
 Frame = +2

Query: 155 VGSRVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYRDADDAVYELNGKE 334
           + +R+Y+G L   V E+D+E FF+G+G+IRD+L+KNG+GFVEF+D RDA+DAV++LNGKE
Sbjct: 1   MAARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKE 60

Query: 335 LLGERVVVEPARGIDRSADR--YRRGDR----------HXXXXXXXXXXXXXXPPTR--- 469
           L GERV+++ ++      DR  +  G R                         PP R   
Sbjct: 61  LGGERVILDYSKPRGGGGDRGGFGGGGRGGARVSSYSGGGGGGRDRFDRYDRGPPRRESR 120

Query: 470 ------TEYRLIVENLSSRISWQDLKDYMR 541
                 T +R++VENLSSRISWQ  K   R
Sbjct: 121 YGRPYSTRHRVVVENLSSRISWQVCKTKRR 150


>Z66521-3|CAD59159.1|  148|Caenorhabditis elegans Hypothetical
           protein W02B12.3b protein.
          Length = 148

 Score =  107 bits (258), Expect = 6e-24
 Identities = 62/146 (42%), Positives = 87/146 (59%), Gaps = 21/146 (14%)
 Frame = +2

Query: 155 VGSRVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYRDADDAVYELNGKE 334
           + +R+Y+G L   V E+D+E FF+G+G+IRD+L+KNG+GFVEF+D RDA+DAV++LNGKE
Sbjct: 1   MAARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKE 60

Query: 335 LLGERVVVEPARGIDRSADR--YRRGDR----------HXXXXXXXXXXXXXXPPTR--- 469
           L GERV+++ ++      DR  +  G R                         PP R   
Sbjct: 61  LGGERVILDYSKPRGGGGDRGGFGGGGRGGARVSSYSGGGGGGRDRFDRYDRGPPRRESR 120

Query: 470 ------TEYRLIVENLSSRISWQDLK 529
                 T +R++VENLSSRISWQ  K
Sbjct: 121 YGRPYSTRHRVVVENLSSRISWQQEK 146


>U28738-11|AAK68399.3|  166|Caenorhabditis elegans Sr protein
           (splicing factor) protein5, isoform b protein.
          Length = 166

 Score = 91.1 bits (216), Expect = 7e-19
 Identities = 46/104 (44%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
 Frame = +2

Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYRDADDAVYELNGKELLG 343
           R+Y+G +P+  RERD+E+F KG+G+I +I +K G+ FV+FED RDA+DA ++L+GK + G
Sbjct: 3   RLYLGKIPYNARERDVERFLKGYGKINNISMKYGFAFVDFEDSRDAEDACHDLDGKTMEG 62

Query: 344 E--RVVVEPARGIDRSADRYRRGDRHXXXXXXXXXXXXXXPPTR 469
              R+VVE ARG  R  DR+  G R               PP R
Sbjct: 63  SSMRLVVEMARGKPRGNDRH--GSRSPRRRSRSPRRRSRTPPRR 104


>U28738-10|AAK72066.3|  208|Caenorhabditis elegans Sr protein
           (splicing factor) protein5, isoform d protein.
          Length = 208

 Score = 91.1 bits (216), Expect = 7e-19
 Identities = 46/104 (44%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
 Frame = +2

Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYRDADDAVYELNGKELLG 343
           R+Y+G +P+  RERD+E+F KG+G+I +I +K G+ FV+FED RDA+DA ++L+GK + G
Sbjct: 3   RLYLGKIPYNARERDVERFLKGYGKINNISMKYGFAFVDFEDSRDAEDACHDLDGKTMEG 62

Query: 344 E--RVVVEPARGIDRSADRYRRGDRHXXXXXXXXXXXXXXPPTR 469
              R+VVE ARG  R  DR+  G R               PP R
Sbjct: 63  SSMRLVVEMARGKPRGNDRH--GSRSPRRRSRSPRRRSRTPPRR 104


>U28738-9|AAA68314.3|  208|Caenorhabditis elegans Sr protein
           (splicing factor) protein5, isoform a protein.
          Length = 208

 Score = 91.1 bits (216), Expect = 7e-19
 Identities = 46/104 (44%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
 Frame = +2

Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYRDADDAVYELNGKELLG 343
           R+Y+G +P+  RERD+E+F KG+G+I +I +K G+ FV+FED RDA+DA ++L+GK + G
Sbjct: 3   RLYLGKIPYNARERDVERFLKGYGKINNISMKYGFAFVDFEDSRDAEDACHDLDGKTMEG 62

Query: 344 E--RVVVEPARGIDRSADRYRRGDRHXXXXXXXXXXXXXXPPTR 469
              R+VVE ARG  R  DR+  G R               PP R
Sbjct: 63  SSMRLVVEMARGKPRGNDRH--GSRSPRRRSRSPRRRSRTPPRR 104


>U41007-10|AAL32214.1|  118|Caenorhabditis elegans Sr protein
           (splicing factor) protein6, isoform c protein.
          Length = 118

 Score = 67.7 bits (158), Expect = 7e-12
 Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
 Frame = +2

Query: 161 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIKN---GYGFVEFEDYRDADDAVYELNGK 331
           ++VYVGGLP     ++LE+ F  FGRIR + +     G+ FVE++D RDA+DAV  L+G 
Sbjct: 3   AKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGS 62

Query: 332 ELLGERVVVEPARG 373
            + G R  VE + G
Sbjct: 63  RICGVRARVELSTG 76


>U41007-9|AAL32213.1|  153|Caenorhabditis elegans Sr protein
           (splicing factor) protein6, isoform b protein.
          Length = 153

 Score = 67.7 bits (158), Expect = 7e-12
 Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
 Frame = +2

Query: 161 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIKN---GYGFVEFEDYRDADDAVYELNGK 331
           ++VYVGGLP     ++LE+ F  FGRIR + +     G+ FVE++D RDA+DAV  L+G 
Sbjct: 3   AKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGS 62

Query: 332 ELLGERVVVEPARG 373
            + G R  VE + G
Sbjct: 63  RICGVRARVELSTG 76


>U41007-8|AAA82270.1|  179|Caenorhabditis elegans Sr protein
           (splicing factor) protein6, isoform a protein.
          Length = 179

 Score = 67.7 bits (158), Expect = 7e-12
 Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
 Frame = +2

Query: 161 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIKN---GYGFVEFEDYRDADDAVYELNGK 331
           ++VYVGGLP     ++LE+ F  FGRIR + +     G+ FVE++D RDA+DAV  L+G 
Sbjct: 3   AKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGS 62

Query: 332 ELLGERVVVEPARG 373
            + G R  VE + G
Sbjct: 63  RICGVRARVELSTG 76


>AC024793-5|AAF60689.1|   79|Caenorhabditis elegans Hypothetical
           protein Y48G1BL.4 protein.
          Length = 79

 Score = 51.2 bits (117), Expect = 7e-07
 Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
 Frame = +2

Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILIKN--GYGFVEFEDYRDADDAVYELNGKEL 337
           RVY+G  P    +RD E FF  +G++ D ++KN  G G  +F+D  DADD + +   + L
Sbjct: 3   RVYIGRFPNRASDRDAEHFFCDYGKLPDAIMKNVFGVGCKDFQDQSDADDIICDEQTRIL 62

Query: 338 LGERV 352
           L E++
Sbjct: 63  LVEKL 67


>AC024826-10|AAM97977.1|  435|Caenorhabditis elegans Hypothetical
           protein Y55F3AM.3c protein.
          Length = 435

 Score = 49.2 bits (112), Expect = 3e-06
 Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 12/174 (6%)
 Frame = +2

Query: 197 RERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYELNGKELLGERV 352
           R RDLE+FF   G +RD+ I          G  +VEF D  ++      LNG+ L+G  +
Sbjct: 37  RPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWD-EESVPLGLALNGQRLMGAPL 95

Query: 353 VVEPARGIDRSADRYRRGDRHXXXXXXXXXXXXXXPPTRTEYRLIVENLSSRISWQDLKD 532
            ++        A+R R  +                P  +    ++VENL  +I  + ++D
Sbjct: 96  QIQRT-----CAERNRAAN-----SSVASTLGFVAPGNKGPTHVLVENLHPKIDEKMIRD 145

Query: 533 YMRQAGEV----TYADAHKQHRNEGVVEFATHSDMRAAIEKLDGTELNGRRVRL 682
                G +       D+++++R    + F    D + + E+L+  EL GR +RL
Sbjct: 146 IFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKSCEQLNNFELAGRCIRL 199


>AC024826-8|AAF60795.2|  580|Caenorhabditis elegans Hypothetical
           protein Y55F3AM.3a protein.
          Length = 580

 Score = 49.2 bits (112), Expect = 3e-06
 Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 12/174 (6%)
 Frame = +2

Query: 197 RERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYELNGKELLGERV 352
           R RDLE+FF   G +RD+ I          G  +VEF D  ++      LNG+ L+G  +
Sbjct: 182 RPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWD-EESVPLGLALNGQRLMGAPL 240

Query: 353 VVEPARGIDRSADRYRRGDRHXXXXXXXXXXXXXXPPTRTEYRLIVENLSSRISWQDLKD 532
            ++        A+R R  +                P  +    ++VENL  +I  + ++D
Sbjct: 241 QIQRT-----CAERNRAAN-----SSVASTLGFVAPGNKGPTHVLVENLHPKIDEKMIRD 290

Query: 533 YMRQAGEV----TYADAHKQHRNEGVVEFATHSDMRAAIEKLDGTELNGRRVRL 682
                G +       D+++++R    + F    D + + E+L+  EL GR +RL
Sbjct: 291 IFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKSCEQLNNFELAGRCIRL 344


>U41531-7|AAA83161.2|  415|Caenorhabditis elegans Feminizing gene on
           x protein 1 protein.
          Length = 415

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
 Frame = +2

Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILI------KNGYGFVEFEDYRDADDAVYELN 325
           R++V  +PF  R+ DL+  F+ FG + D+ I        G+GFV  E  +DA+ A  EL+
Sbjct: 154 RLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQELH 213

Query: 326 GKELLGERVVVEPA 367
           G  + G ++ V  A
Sbjct: 214 GSMIEGRKIEVNCA 227


>U14946-1|AAA67723.1|  415|Caenorhabditis elegans ribonucleoprotein
           protein.
          Length = 415

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
 Frame = +2

Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILI------KNGYGFVEFEDYRDADDAVYELN 325
           R++V  +PF  R+ DL+  F+ FG + D+ I        G+GFV  E  +DA+ A  EL+
Sbjct: 154 RLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQELH 213

Query: 326 GKELLGERVVVEPA 367
           G  + G ++ V  A
Sbjct: 214 GSMIEGRKIEVNCA 227


>Z36238-3|CAA85276.1|  404|Caenorhabditis elegans Hypothetical
           protein R74.5a protein.
          Length = 404

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
 Frame = +2

Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILI------KNGYGFVEFEDYRDADDAVYELN 325
           R++V  +PF  RE DL   F+  G + D+ I        G+GFV  ++  DAD A  E N
Sbjct: 101 RLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFN 160

Query: 326 GKELLGERVVVEPA 367
           G  + G RV V  A
Sbjct: 161 GTTIEGRRVEVNLA 174


>DQ485531-1|ABF22491.1|  404|Caenorhabditis elegans RNA-binding
           protein ASD-1 protein.
          Length = 404

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
 Frame = +2

Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILI------KNGYGFVEFEDYRDADDAVYELN 325
           R++V  +PF  RE DL   F+  G + D+ I        G+GFV  ++  DAD A  E N
Sbjct: 101 RLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFN 160

Query: 326 GKELLGERVVVEPA 367
           G  + G RV V  A
Sbjct: 161 GTTIEGRRVEVNLA 174


>Z83230-6|CAB05746.1|  336|Caenorhabditis elegans Hypothetical
           protein F56A8.6 protein.
          Length = 336

 Score = 44.4 bits (100), Expect = 8e-05
 Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
 Frame = +2

Query: 167 VYVGGLPFGVRERDLEKFFKGFGRIRDILIKN--------GYGFVEFEDYRDADDAVYEL 322
           V+VG + + V E  +   F   G +  I + +        GYGF+EF D + A+ A+  L
Sbjct: 20  VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNL 79

Query: 323 NGKELLGERVVVEPARG 373
           NG EL G  + V+ A G
Sbjct: 80  NGYELSGRILRVDSAAG 96



 Score = 30.7 bits (66), Expect = 1.0
 Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
 Frame = +2

Query: 467 RTEYRLIVENLSSRISWQDLKDYMRQAGEV-TYADAHKQHRNE----GVVEFATHSDMRA 631
           R++  + V N+S  +S   ++    +AG V +    H +   +    G +EF        
Sbjct: 15  RSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEV 74

Query: 632 AIEKLDGTELNGRRVRL 682
           AI  L+G EL+GR +R+
Sbjct: 75  AIRNLNGYELSGRILRV 91


>Z81108-1|CAB03236.1|   83|Caenorhabditis elegans Hypothetical
           protein R09B3.2 protein.
          Length = 83

 Score = 44.4 bits (100), Expect = 8e-05
 Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
 Frame = +2

Query: 167 VYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYEL 322
           VYVG  PF   E +L  FF   G+I ++ I          G+ F+EF +   A  AV ++
Sbjct: 7   VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQM 66

Query: 323 NGKELLGERVVVEPA 367
           NG E  G  + V  A
Sbjct: 67  NGAEFNGRPLRVNLA 81



 Score = 30.7 bits (66), Expect = 1.0
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +2

Query: 584 RNEGVVEFATHSDMRAAIEKLDGTELNGRRVRL 682
           R    +EFA     + A+E+++G E NGR +R+
Sbjct: 46  RGFAFIEFAEEGSAQRAVEQMNGAEFNGRPLRV 78


>Z78536-3|CAB01717.2|  360|Caenorhabditis elegans Hypothetical
           protein C07A4.1 protein.
          Length = 360

 Score = 44.4 bits (100), Expect = 8e-05
 Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
 Frame = +2

Query: 149 KMVGSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI--KNGYGFVEFEDYRDADDAVYEL 322
           K   + VYVG +     + DL   F  +G I ++ I     Y FV +E    A  A+ E+
Sbjct: 233 KADNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIMEM 292

Query: 323 NGKELLGERV 352
           NGKE+ G +V
Sbjct: 293 NGKEMAGNQV 302



 Score = 41.9 bits (94), Expect = 4e-04
 Identities = 46/179 (25%), Positives = 74/179 (41%), Gaps = 8/179 (4%)
 Frame = +2

Query: 167 VYVGGLPFGVRERDLEKFFKGFGR------IRDILIKN--GYGFVEFEDYRDADDAVYEL 322
           V+VG L   V    L+  F  FG       IRD+  +   GYGFV F + ++A++A+  +
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 196

Query: 323 NGKELLGERVVVEPARGIDRSADRYRRGDRHXXXXXXXXXXXXXXPPTRTEYRLIVENLS 502
           NGK  +G+R V        R+    R+                      T   + V N+S
Sbjct: 197 NGK-WIGKRAV--------RTNWAARKNSEENRDKLTFEQVFNSTKADNTS--VYVGNIS 245

Query: 503 SRISWQDLKDYMRQAGEVTYADAHKQHRNEGVVEFATHSDMRAAIEKLDGTELNGRRVR 679
            + +  DL+D     G++      K  R    V +        AI +++G E+ G +VR
Sbjct: 246 QQTTDADLRDLFSTYGDIAEVRIFKTQR-YAFVRYEKKECATKAIMEMNGKEMAGNQVR 303


>U97193-2|AAB52444.1|  137|Caenorhabditis elegans Hypothetical
           protein C06A5.5 protein.
          Length = 137

 Score = 41.9 bits (94), Expect = 4e-04
 Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
 Frame = +2

Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYR-DADDAVYELNGKELL 340
           RVY+G  P    + D E FF G+ ++ D ++KN +G      YR DADD +++   + LL
Sbjct: 3   RVYIGRFPNRASDHDAEHFFCGYEKLPDAIMKNIFGV----GYRSDADDIIFDEQRRILL 58

Query: 341 GER 349
            E+
Sbjct: 59  VEK 61


>AF106588-2|AAC78488.1|  137|Caenorhabditis elegans Hypothetical
           protein Y76G2A.1 protein.
          Length = 137

 Score = 41.9 bits (94), Expect = 4e-04
 Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
 Frame = +2

Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYR-DADDAVYELNGKELL 340
           RVY+G  P    + D E FF G+ ++ D ++KN +G      YR DADD +++   + LL
Sbjct: 3   RVYIGRFPNRASDHDAEHFFCGYEKLPDAIMKNIFGV----GYRSDADDIIFDEQRRILL 58

Query: 341 GER 349
            E+
Sbjct: 59  VEK 61


>Z81108-4|CAB03237.1|   85|Caenorhabditis elegans Hypothetical
           protein R09B3.3 protein.
          Length = 85

 Score = 41.5 bits (93), Expect = 5e-04
 Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
 Frame = +2

Query: 152 MVGSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADD 307
           M G  VYVG  PF   E DL  +F   G + ++ I          G+ FVEF +   A  
Sbjct: 1   MSGFSVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQR 60

Query: 308 AVYELNGKELLGERVVVEPAR 370
           AV + NG +  G  + V  A+
Sbjct: 61  AVDQFNGVDFNGRALRVNLAQ 81



 Score = 31.5 bits (68), Expect = 0.58
 Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
 Frame = +2

Query: 476 YRLIVENLSSRISWQDLKDYMRQAGEVT----YADAHK-QHRNEGVVEFATHSDMRAAIE 640
           + + V N   + +  DL +Y  QAG V+      D    + R    VEF   +  + A++
Sbjct: 4   FSVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVD 63

Query: 641 KLDGTELNGRRVRL 682
           + +G + NGR +R+
Sbjct: 64  QFNGVDFNGRALRV 77


>U39997-3|AAK68389.1|  498|Caenorhabditis elegans Human daz (deleted
           in azoospermia)homolog protein 1 protein.
          Length = 498

 Score = 41.5 bits (93), Expect = 5e-04
 Identities = 21/71 (29%), Positives = 42/71 (59%), Gaps = 7/71 (9%)
 Frame = +2

Query: 146 WKMVGSRVYVGGLPFGVRERDLEKFFKGFGRIRDI-LIKN------GYGFVEFEDYRDAD 304
           ++++ +R++VGG P    E +L + F+ F  ++D+ ++K+      GYGF+ FE   D  
Sbjct: 61  YELIPNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFET-EDQA 119

Query: 305 DAVYELNGKEL 337
           + + +L  K+L
Sbjct: 120 EEIRKLTPKQL 130


>AB025253-1|BAA88577.1|  499|Caenorhabditis elegans DAZ-1 protein.
          Length = 499

 Score = 41.5 bits (93), Expect = 5e-04
 Identities = 21/71 (29%), Positives = 42/71 (59%), Gaps = 7/71 (9%)
 Frame = +2

Query: 146 WKMVGSRVYVGGLPFGVRERDLEKFFKGFGRIRDI-LIKN------GYGFVEFEDYRDAD 304
           ++++ +R++VGG P    E +L + F+ F  ++D+ ++K+      GYGF+ FE   D  
Sbjct: 62  YELIPNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFET-EDQA 120

Query: 305 DAVYELNGKEL 337
           + + +L  K+L
Sbjct: 121 EEIRKLTPKQL 131


>Z36752-6|CAA85327.1|  456|Caenorhabditis elegans Hypothetical
           protein F35H8.5 protein.
          Length = 456

 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
 Frame = +2

Query: 158 GSRVYVGGLPFGVRERDLEKFFKGFGRI--RDILIKN------GYGFVEFEDYRDADDAV 313
           GS +YV G+P  +   +LE  F+ FG+I    IL  N      G GFV F+   +AD A+
Sbjct: 127 GSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADVAI 186

Query: 314 YELNG 328
             LNG
Sbjct: 187 KTLNG 191



 Score = 31.9 bits (69), Expect = 0.44
 Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
 Frame = +2

Query: 161 SRVYVGGLPFGVRERDLEKFFKGFGRIRDI-LIKN-------GYGFVEFEDYRDADDAVY 316
           + + +  LP G+ + ++   F   G I    L+++       GYGFV +    DA  AV 
Sbjct: 42  TNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVS 101

Query: 317 ELNGKELLGERVVVEPAR 370
             NG  L  + + V  AR
Sbjct: 102 SFNGLRLQNKTIKVSYAR 119



 Score = 30.7 bits (66), Expect = 1.0
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +2

Query: 239 IRDILIK-NGYGFVEFEDYRDADDAVYELNGKELLGERVVV 358
           +RD+  +  GY FV   +Y +A +A+  LNG  L G+ + V
Sbjct: 406 LRDLTQQCKGYAFVSMSNYTEAYNAMLSLNGTNLAGKTLQV 446


>AF098993-1|AAC67471.2|  367|Caenorhabditis elegans Zinc finger
           transcription factorfamily protein 4 protein.
          Length = 367

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
 Frame = +2

Query: 152 MVGSRVYVGGLPFGVRERD-LEKFFKGFGRIRDI--LIKNGYGFVEFEDYRDADDAVYEL 322
           M+ +RV++G +   +  RD + + F+ FG+I  +    + G+GFV+F +   AD++   L
Sbjct: 80  MIRARVFIGNIARAIITRDDIIELFRPFGKIIAVNYFAQQGFGFVQFNEAGSADESCRSL 139

Query: 323 NG 328
           NG
Sbjct: 140 NG 141


>U55363-5|AAA97963.1|  351|Caenorhabditis elegans Spindle
           orientation defective protein4 protein.
          Length = 351

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
 Frame = +2

Query: 161 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILI------KNGYGFVEFEDYRDADDAVYEL 322
           +R+YV  +PF  RE+DL   F  +GR+  + I        G+GFV  +     + A   L
Sbjct: 51  NRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKARAAL 110

Query: 323 NGKELLGERVVVEPA 367
           +   + G  + V  A
Sbjct: 111 HESHVQGRIIEVRRA 125


>AB052819-1|BAC65239.1|  351|Caenorhabditis elegans PIP-1 protein.
          Length = 351

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
 Frame = +2

Query: 161 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILI------KNGYGFVEFEDYRDADDAVYEL 322
           +R+YV  +PF  RE+DL   F  +GR+  + I        G+GFV  +     + A   L
Sbjct: 51  NRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKARAAL 110

Query: 323 NGKELLGERVVVEPA 367
           +   + G  + V  A
Sbjct: 111 HESHVQGRIIEVRRA 125


>Z81106-3|CAB03222.1|   84|Caenorhabditis elegans Hypothetical
           protein R06C1.4 protein.
          Length = 84

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
 Frame = +2

Query: 158 GSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAV 313
           G  VYVG +P+   E ++  +F   G + ++ I          G+ FVEF +   A  AV
Sbjct: 5   GFSVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAV 64

Query: 314 YELNGKELLGERVVVEPA 367
            +LNG    G  + V  A
Sbjct: 65  EQLNGVAFNGRNLRVNYA 82



 Score = 29.5 bits (63), Expect = 2.4
 Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
 Frame = +2

Query: 476 YRLIVENLSSRISWQDLKDYMRQAGEVT-----YADAHKQHRNEGVVEFATHSDMRAAIE 640
           + + V N+  + + +++ +Y    G V      Y     + R    VEF+  +  + A+E
Sbjct: 6   FSVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVE 65

Query: 641 KLDGTELNGRRVRL 682
           +L+G   NGR +R+
Sbjct: 66  QLNGVAFNGRNLRV 79


>AF047662-1|AAC04442.1|  248|Caenorhabditis elegans Suppressor
           protein 12 protein.
          Length = 248

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 8/63 (12%)
 Frame = +2

Query: 161 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVY 316
           ++++VGGLP+   ++ L ++F+ FG I + ++          GYGFV  +D   A+ A  
Sbjct: 35  TKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACK 94

Query: 317 ELN 325
           + N
Sbjct: 95  DPN 97


>AL117204-22|CAB55151.1|  331|Caenorhabditis elegans Hypothetical
           protein Y116A8C.34 protein.
          Length = 331

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
 Frame = +2

Query: 167 VYVGGLPFGVRERDLEKFFKGFGRIRDILIK--------NGYGFVEFEDYRDADDAVYEL 322
           +YVGG    V E+ L   F  FG +  I I          G+GFVEF+   DA  A+  +
Sbjct: 13  LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNM 72

Query: 323 NGKELLGERVVVEPAR 370
           N  EL G+ + V  AR
Sbjct: 73  NESELFGKTIRVNFAR 88



 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +2

Query: 578 QHRNEGVVEFATHSDMRAAIEKLDGTELNGRRVRL 682
           +HR  G VEF    D   AI+ ++ +EL G+ +R+
Sbjct: 50  KHRGFGFVEFDMAEDAAMAIDNMNESELFGKTIRV 84


>AC024791-22|AAF60676.1|  339|Caenorhabditis elegans Rnp (rrm rna
           binding domain) containingprotein 6, isoform a protein.
          Length = 339

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 44/187 (23%), Positives = 76/187 (40%), Gaps = 13/187 (6%)
 Frame = +2

Query: 161 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIK--------NGYGFVEFEDYRDADDAVY 316
           SR+YVG + F +RE  L + F  FG I+ I +           + FVE+E    A  A  
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161

Query: 317 ELNGKELLGERVVVEPARGIDRSADRYRRGDRHXXXXXXXXXXXXXXPPTRTEYRLIVEN 496
            +NG ++LG        R +  ++  ++                      +  +R+ V +
Sbjct: 162 SMNG-QMLG-------GRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSS 213

Query: 497 LSSRISWQDLKDYMRQAGEV-----TYADAHKQHRNEGVVEFATHSDMRAAIEKLDGTEL 661
           +   +S  DLK      GE+       A   + HR  G +EF   +    AI  ++  +L
Sbjct: 214 VHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDL 273

Query: 662 NGRRVRL 682
            G+ +R+
Sbjct: 274 GGQYLRV 280


>AC024791-21|AAF60666.1|  749|Caenorhabditis elegans Rnp (rrm rna
           binding domain) containingprotein 6, isoform b protein.
          Length = 749

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 44/187 (23%), Positives = 76/187 (40%), Gaps = 13/187 (6%)
 Frame = +2

Query: 161 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIK--------NGYGFVEFEDYRDADDAVY 316
           SR+YVG + F +RE  L + F  FG I+ I +           + FVE+E    A  A  
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161

Query: 317 ELNGKELLGERVVVEPARGIDRSADRYRRGDRHXXXXXXXXXXXXXXPPTRTEYRLIVEN 496
            +NG ++LG        R +  ++  ++                      +  +R+ V +
Sbjct: 162 SMNG-QMLG-------GRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSS 213

Query: 497 LSSRISWQDLKDYMRQAGEV-----TYADAHKQHRNEGVVEFATHSDMRAAIEKLDGTEL 661
           +   +S  DLK      GE+       A   + HR  G +EF   +    AI  ++  +L
Sbjct: 214 VHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDL 273

Query: 662 NGRRVRL 682
            G+ +R+
Sbjct: 274 GGQYLRV 280


>AC024791-23|AAM81102.1|  346|Caenorhabditis elegans Rnp (rrm rna
           binding domain) containingprotein 6, isoform c protein.
          Length = 346

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 44/186 (23%), Positives = 75/186 (40%), Gaps = 13/186 (6%)
 Frame = +2

Query: 161 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIK--------NGYGFVEFEDYRDADDAVY 316
           SR+YVG + F +RE  L + F  FG I+ I +           + FVE+E    A  A  
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161

Query: 317 ELNGKELLGERVVVEPARGIDRSADRYRRGDRHXXXXXXXXXXXXXXPPTRTEYRLIVEN 496
            +NG ++LG        R +  ++  ++                      +  +R+ V +
Sbjct: 162 SMNG-QMLG-------GRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSS 213

Query: 497 LSSRISWQDLKDYMRQAGEV-----TYADAHKQHRNEGVVEFATHSDMRAAIEKLDGTEL 661
           +   +S  DLK      GE+       A   + HR  G +EF   +    AI  ++  +L
Sbjct: 214 VHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDL 273

Query: 662 NGRRVR 679
            G+ +R
Sbjct: 274 GGQYLR 279


>U21320-5|AAA62536.2|  332|Caenorhabditis elegans Rnp (rrm rna
           binding domain) containingprotein 7 protein.
          Length = 332

 Score = 37.9 bits (84), Expect = 0.007
 Identities = 20/76 (26%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
 Frame = +2

Query: 167 VYVGGLPFGVRERDLEKFFKGFGRIRDILIKN-------GYGFVEFEDYRDADDAVYELN 325
           ++VG + +   E  L + F+ +G+I+ + + +       GY F+E+ D  +   A  + +
Sbjct: 106 LFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAEMHTAYKKAD 165

Query: 326 GKELLGERVVVEPARG 373
           G ++ G+R+VV+  RG
Sbjct: 166 GIKVDGKRLVVDYERG 181


>AC084197-11|AAM44397.1|  305|Caenorhabditis elegans Homologous to
           drosophila sqd (squid)protein protein 1, isoform a
           protein.
          Length = 305

 Score = 37.9 bits (84), Expect = 0.007
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 8/57 (14%)
 Frame = +2

Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDI--------LIKNGYGFVEFEDYRDADDA 310
           +V+VGGLP    E+DL   F+ FG++ DI          +  + F+ FE+   AD A
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167


>AC084197-10|AAY43984.1|  308|Caenorhabditis elegans Homologous to
           drosophila sqd (squid)protein protein 1, isoform b
           protein.
          Length = 308

 Score = 37.9 bits (84), Expect = 0.007
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 8/57 (14%)
 Frame = +2

Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDI--------LIKNGYGFVEFEDYRDADDA 310
           +V+VGGLP    E+DL   F+ FG++ DI          +  + F+ FE+   AD A
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167


>AC006833-6|AAF60950.1|  491|Caenorhabditis elegans Hypothetical
           protein ZK616.1 protein.
          Length = 491

 Score = 37.9 bits (84), Expect = 0.007
 Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
 Frame = +2

Query: 161 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIK----NGYGFVEFEDYRDADDAVYELNG 328
           S V+V G+   + + +L   ++ FG I D +++    +GYGFV F+   +A   + E++G
Sbjct: 96  SNVFVRGISRDMPDTEL---YQAFGGITDGVVQCHVADGYGFVLFDTRANAQKKIVEMDG 152

Query: 329 KELLGERVVVEPAR 370
           K L G+ + V  AR
Sbjct: 153 KTLNGKLISVSWAR 166


>Z32683-11|CAA83626.1|  142|Caenorhabditis elegans Hypothetical
           protein R07E5.14 protein.
          Length = 142

 Score = 37.1 bits (82), Expect = 0.012
 Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
 Frame = +2

Query: 167 VYVGGLPFGVRERDLEKFFKGFGRIRDILIK--------NGYGFVEFEDYRDADDAVYEL 322
           V+V  +     E D+   F  +G+I++I +          GY  VE+E  ++A++A+ + 
Sbjct: 57  VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116

Query: 323 NGKELLGERVVVE 361
           N  +LLG+ V V+
Sbjct: 117 NDTDLLGQNVKVD 129


>U79157-1|AAC26982.1|  496|Caenorhabditis elegans splicing factor
           U2AF65 protein.
          Length = 496

 Score = 37.1 bits (82), Expect = 0.012
 Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
 Frame = +2

Query: 161 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIK-------NGYGFVEFEDYRDADDAVYE 319
           +++++GGLP  + E  +++    FG ++   +         GY F E+ D    D A+  
Sbjct: 291 NKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAG 350

Query: 320 LNGKELLGERVVVEPA 367
           LNG +L  +++VV+ A
Sbjct: 351 LNGMQLGDKQLVVQLA 366


>U23484-3|AAK68298.1|  126|Caenorhabditis elegans Sr protein
           (splicing factor) protein4, isoform b protein.
          Length = 126

 Score = 37.1 bits (82), Expect = 0.012
 Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
 Frame = +2

Query: 173 VGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYELNG 328
           +  L +     DL + F+ +G I D+ I          G+GFV F + RDA+ A+   +G
Sbjct: 23  IDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDG 82

Query: 329 KELLGERVVVEPARGIDRSADRYRRGDR 412
           K + G  + V  A+  DR +D   RG R
Sbjct: 83  KLVDGRELRVTLAK-YDRPSD--ERGGR 107


>U23484-2|AAC46767.1|  196|Caenorhabditis elegans Sr protein
           (splicing factor) protein4, isoform a protein.
          Length = 196

 Score = 37.1 bits (82), Expect = 0.012
 Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
 Frame = +2

Query: 173 VGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYELNG 328
           +  L +     DL + F+ +G I D+ I          G+GFV F + RDA+ A+   +G
Sbjct: 23  IDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDG 82

Query: 329 KELLGERVVVEPARGIDRSADRYRRGDR 412
           K + G  + V  A+  DR +D   RG R
Sbjct: 83  KLVDGRELRVTLAK-YDRPSD--ERGGR 107


>U00052-10|AAK21429.2|  289|Caenorhabditis elegans Rnp (rrm rna
           binding domain) containingprotein 5 protein.
          Length = 289

 Score = 37.1 bits (82), Expect = 0.012
 Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
 Frame = +2

Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDI---------LIKNGYGFVEFEDYRDADDAVY 316
           RV +  L   V +  LE+ F  +G I+++          +  GYG+VE+++  DA+ ++ 
Sbjct: 134 RVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAEKSIK 193

Query: 317 ELNGKELLGERVVVEPARG 373
            ++G ++ G  V VE   G
Sbjct: 194 HMDGGQIDGMAVHVEMTIG 212



 Score = 31.5 bits (68), Expect = 0.58
 Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
 Frame = +2

Query: 479 RLIVENLSSRISWQDLKDYMRQAGEVTYADA-----HKQ-HRNEGVVEFATHSDMRAAIE 640
           R++++NLS  +    L++     G +   D      H   HR  G VE+    D   +I+
Sbjct: 134 RVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAEKSIK 193

Query: 641 KLDGTELNGRRVRL 682
            +DG +++G  V +
Sbjct: 194 HMDGGQIDGMAVHV 207


>AC024875-3|AAK29989.1|  496|Caenorhabditis elegans U2af splicing
           factor protein 1,isoform a protein.
          Length = 496

 Score = 37.1 bits (82), Expect = 0.012
 Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
 Frame = +2

Query: 161 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIK-------NGYGFVEFEDYRDADDAVYE 319
           +++++GGLP  + E  +++    FG ++   +         GY F E+ D    D A+  
Sbjct: 291 NKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAG 350

Query: 320 LNGKELLGERVVVEPA 367
           LNG +L  +++VV+ A
Sbjct: 351 LNGMQLGDKQLVVQLA 366


>AC024875-2|AAM44400.1|  471|Caenorhabditis elegans U2af splicing
           factor protein 1,isoform d protein.
          Length = 471

 Score = 37.1 bits (82), Expect = 0.012
 Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
 Frame = +2

Query: 161 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIK-------NGYGFVEFEDYRDADDAVYE 319
           +++++GGLP  + E  +++    FG ++   +         GY F E+ D    D A+  
Sbjct: 266 NKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAG 325

Query: 320 LNGKELLGERVVVEPA 367
           LNG +L  +++VV+ A
Sbjct: 326 LNGMQLGDKQLVVQLA 341


>AC024875-1|AAL00879.1|  474|Caenorhabditis elegans U2af splicing
           factor protein 1,isoform c protein.
          Length = 474

 Score = 37.1 bits (82), Expect = 0.012
 Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
 Frame = +2

Query: 161 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIK-------NGYGFVEFEDYRDADDAVYE 319
           +++++GGLP  + E  +++    FG ++   +         GY F E+ D    D A+  
Sbjct: 269 NKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAG 328

Query: 320 LNGKELLGERVVVEPA 367
           LNG +L  +++VV+ A
Sbjct: 329 LNGMQLGDKQLVVQLA 344


>Z81038-2|CAB02757.1|  454|Caenorhabditis elegans Hypothetical
           protein C25A1.4 protein.
          Length = 454

 Score = 36.7 bits (81), Expect = 0.016
 Identities = 21/65 (32%), Positives = 31/65 (47%)
 Frame = +2

Query: 482 LIVENLSSRISWQDLKDYMRQAGEVTYADAHKQHRNEGVVEFATHSDMRAAIEKLDGTEL 661
           +I+ NL S  +WQ ++D +R  GEV   D          + FAT  D   A   L G+ +
Sbjct: 387 IIIRNLPSDYTWQIVRDRVRNFGEVDSVD--MMAPGAARIRFATFQDAERARAALYGSTV 444

Query: 662 NGRRV 676
            GR +
Sbjct: 445 EGRMI 449


>Z78019-5|CAB01455.1|  305|Caenorhabditis elegans Hypothetical
           protein ZK863.7 protein.
          Length = 305

 Score = 36.7 bits (81), Expect = 0.016
 Identities = 20/67 (29%), Positives = 35/67 (52%)
 Frame = +2

Query: 161 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYRDADDAVYELNGKELL 340
           S+++VG LP  V    L++ F+ F ++ +  I   Y FV  E+  D D  +  L G  + 
Sbjct: 3   SKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIEE-DDVDPIITRLTGYTID 61

Query: 341 GERVVVE 361
           G+ V ++
Sbjct: 62  GKVVNIK 68


>U21302-2|AAA92287.1|  305|Caenorhabditis elegans RNP-1 protein.
          Length = 305

 Score = 36.7 bits (81), Expect = 0.016
 Identities = 20/67 (29%), Positives = 35/67 (52%)
 Frame = +2

Query: 161 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYRDADDAVYELNGKELL 340
           S+++VG LP  V    L++ F+ F ++ +  I   Y FV  E+  D D  +  L G  + 
Sbjct: 3   SKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIEE-DDVDPIITRLTGYTID 61

Query: 341 GERVVVE 361
           G+ V ++
Sbjct: 62  GKVVNIK 68


>Z46676-8|CAB60993.2|  388|Caenorhabditis elegans Hypothetical
           protein C08B11.5 protein.
          Length = 388

 Score = 36.3 bits (80), Expect = 0.021
 Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
 Frame = +2

Query: 167 VYVGGLPFGVRERDLEKFFKGFGRI------RDILIKN--GYGFVEFEDYRDADDAVYEL 322
           +YVGGL   V E  L +     G +      +D +  N  G+GFVEF    DAD A+  L
Sbjct: 15  IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74

Query: 323 NGKELLGERVVVEPARGIDRSAD 391
           N  +L G+ + V  A   +++ D
Sbjct: 75  NMIKLYGKPIKVNKASAHEKNMD 97



 Score = 36.3 bits (80), Expect = 0.021
 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
 Frame = +2

Query: 155 VGSRVYVGGLPFGVRERDLEKFFKGFGRI-------RDI--LIKNGYGFVEFEDYRDADD 307
           VG+ ++VG L   V E+ L   F  FG I       RD+      G+ F+ F  +  +D 
Sbjct: 98  VGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDT 157

Query: 308 AVYELNGKELLGERVVVEPARGIDRSADRY 397
           A+  +NG+ L    + V  A   D   +R+
Sbjct: 158 ALEAMNGQFLCNRAITVSYAFKRDSKGERH 187


>U28944-7|AAN63457.1|  295|Caenorhabditis elegans Hypothetical
           protein C18A3.5f protein.
          Length = 295

 Score = 36.3 bits (80), Expect = 0.021
 Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
 Frame = +2

Query: 167 VYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYEL 322
           V+VG L   V  + L + F+ FG + D  +          GYGFV +    +A+ A+ ++
Sbjct: 24  VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 83

Query: 323 NGKELLGERVV 355
           NG + LG R +
Sbjct: 84  NG-QWLGRRTI 93



 Score = 30.3 bits (65), Expect = 1.3
 Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
 Frame = +2

Query: 464 TRTEYRLIVENLSSRISWQDLKDYMRQAGEVTYADAHK-----QHRNEGVVEFATHSDMR 628
           T   + + V +LSS +  Q L++  +  G+V+ A   +     + +  G V +    +  
Sbjct: 18  TTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAE 77

Query: 629 AAIEKLDGTELNGRRVR 679
            AIE+++G  L  R +R
Sbjct: 78  RAIEQMNGQWLGRRTIR 94


>U28944-6|AAN63456.1|  305|Caenorhabditis elegans Hypothetical
           protein C18A3.5e protein.
          Length = 305

 Score = 36.3 bits (80), Expect = 0.021
 Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
 Frame = +2

Query: 167 VYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYEL 322
           V+VG L   V  + L + F+ FG + D  +          GYGFV +    +A+ A+ ++
Sbjct: 34  VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 93

Query: 323 NGKELLGERVV 355
           NG + LG R +
Sbjct: 94  NG-QWLGRRTI 103



 Score = 30.3 bits (65), Expect = 1.3
 Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
 Frame = +2

Query: 464 TRTEYRLIVENLSSRISWQDLKDYMRQAGEVTYADAHK-----QHRNEGVVEFATHSDMR 628
           T   + + V +LSS +  Q L++  +  G+V+ A   +     + +  G V +    +  
Sbjct: 28  TTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAE 87

Query: 629 AAIEKLDGTELNGRRVR 679
            AIE+++G  L  R +R
Sbjct: 88  RAIEQMNGQWLGRRTIR 104


>U28944-5|AAK68191.1|  408|Caenorhabditis elegans Hypothetical
           protein C18A3.5a protein.
          Length = 408

 Score = 36.3 bits (80), Expect = 0.021
 Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
 Frame = +2

Query: 167 VYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYEL 322
           V+VG L   V  + L + F+ FG + D  +          GYGFV +    +A+ A+ ++
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196

Query: 323 NGKELLGERVV 355
           NG + LG R +
Sbjct: 197 NG-QWLGRRTI 206



 Score = 33.1 bits (72), Expect = 0.19
 Identities = 42/181 (23%), Positives = 73/181 (40%), Gaps = 10/181 (5%)
 Frame = +2

Query: 167 VYVGGLPFGVRERDLEKFFKGFGRI-RDILIKNG----YGFVEFEDYRDADDAVYELNGK 331
           +YVG L   V E  +   F   G + +  +I +G    Y FVEF D+  A  A+  +N +
Sbjct: 48  LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSNDPYAFVEFSDHGQASQALQTMNKR 107

Query: 332 ELLGERVVVEPARGIDRSADRYRRGDRHXXXXXXXXXXXXXXPPTRTEYRLIVENLSSRI 511
            LL   + V  A    +   +                       T   + + V +LSS +
Sbjct: 108 LLLDREMKVNWAVEPGQQQSKI---------------------DTTRHFHVFVGDLSSEV 146

Query: 512 SWQDLKDYMRQAGEVTYADAHK-----QHRNEGVVEFATHSDMRAAIEKLDGTELNGRRV 676
             Q L++  +  G+V+ A   +     + +  G V +    +   AIE+++G  L  R +
Sbjct: 147 DNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTI 206

Query: 677 R 679
           R
Sbjct: 207 R 207


>U28944-4|AAK68192.1|  376|Caenorhabditis elegans Hypothetical
           protein C18A3.5b protein.
          Length = 376

 Score = 36.3 bits (80), Expect = 0.021
 Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
 Frame = +2

Query: 167 VYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYEL 322
           V+VG L   V  + L + F+ FG + D  +          GYGFV +    +A+ A+ ++
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 164

Query: 323 NGKELLGERVV 355
           NG + LG R +
Sbjct: 165 NG-QWLGRRTI 174



 Score = 30.3 bits (65), Expect = 1.3
 Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
 Frame = +2

Query: 464 TRTEYRLIVENLSSRISWQDLKDYMRQAGEVTYADAHK-----QHRNEGVVEFATHSDMR 628
           T   + + V +LSS +  Q L++  +  G+V+ A   +     + +  G V +    +  
Sbjct: 99  TTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAE 158

Query: 629 AAIEKLDGTELNGRRVR 679
            AIE+++G  L  R +R
Sbjct: 159 RAIEQMNGQWLGRRTIR 175


>U24189-3|AAC47514.1|  398|Caenorhabditis elegans RRM-type RNA
           binding protein protein.
          Length = 398

 Score = 36.3 bits (80), Expect = 0.021
 Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
 Frame = +2

Query: 167 VYVGGLPFGVRERDLEKFFKGFGRI------RDILIKN--GYGFVEFEDYRDADDAVYEL 322
           +YVGGL   V E  L +     G +      +D +  N  G+GFVEF    DAD A+  L
Sbjct: 25  IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84

Query: 323 NGKELLGERVVVEPARGIDRSAD 391
           N  +L G+ + V  A   +++ D
Sbjct: 85  NMIKLYGKPIKVNKASAHEKNMD 107



 Score = 36.3 bits (80), Expect = 0.021
 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
 Frame = +2

Query: 155 VGSRVYVGGLPFGVRERDLEKFFKGFGRI-------RDI--LIKNGYGFVEFEDYRDADD 307
           VG+ ++VG L   V E+ L   F  FG I       RD+      G+ F+ F  +  +D 
Sbjct: 108 VGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDT 167

Query: 308 AVYELNGKELLGERVVVEPARGIDRSADRY 397
           A+  +NG+ L    + V  A   D   +R+
Sbjct: 168 ALEAMNGQFLCNRAITVSYAFKRDSKGERH 197


>AL137227-1|CAB70238.2|  611|Caenorhabditis elegans Hypothetical
           protein F58D5.1 protein.
          Length = 611

 Score = 36.3 bits (80), Expect = 0.021
 Identities = 20/68 (29%), Positives = 31/68 (45%)
 Frame = +2

Query: 167 VYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYRDADDAVYELNGKELLGE 346
           +Y+  +   V E  L + FK +  +  +     Y F+ F +  D   A+ E NGKEL G 
Sbjct: 379 LYIRNIKEAVTEEKLNELFKEYASLDRVKKVKDYAFIHFNERDDCLKAMEEWNGKELEGT 438

Query: 347 RVVVEPAR 370
            V    A+
Sbjct: 439 VVEASLAK 446



 Score = 31.1 bits (67), Expect = 0.77
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 8/68 (11%)
 Frame = +2

Query: 158 GSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAV 313
           G  +YVG +P  V E  L   F+  G+I D+ +          GY FV + +  DA  A 
Sbjct: 199 GHEIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAA 258

Query: 314 YELNGKEL 337
              +G E+
Sbjct: 259 KTYDGHEI 266


>AF098501-6|AAL38960.1|  315|Caenorhabditis elegans Hypothetical
           protein H28G03.1b protein.
          Length = 315

 Score = 36.3 bits (80), Expect = 0.021
 Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
 Frame = +2

Query: 158 GSRVYVGGLPFGVRERD-LEKFFKGFGRIRDILI---KNGYGFVEFEDYRDADDAVYELN 325
           G ++ + G+  GV   D L  +F+ FG +  + I     G GFV +ED   AD  +   +
Sbjct: 146 GCKLLLNGITNGVHSVDSLRVYFETFGTLDQVEILGQPRGLGFVIYEDKESADRCLAHNS 205

Query: 326 GKELLGERVV 355
           G+ ++ ER +
Sbjct: 206 GRHIVNERKI 215


>AF098501-5|AAM69104.1|  335|Caenorhabditis elegans Hypothetical
           protein H28G03.1c protein.
          Length = 335

 Score = 36.3 bits (80), Expect = 0.021
 Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
 Frame = +2

Query: 158 GSRVYVGGLPFGVRERD-LEKFFKGFGRIRDILI---KNGYGFVEFEDYRDADDAVYELN 325
           G ++ + G+  GV   D L  +F+ FG +  + I     G GFV +ED   AD  +   +
Sbjct: 166 GCKLLLNGITNGVHSVDSLRVYFETFGTLDQVEILGQPRGLGFVIYEDKESADRCLAHNS 225

Query: 326 GKELLGERVV 355
           G+ ++ ER +
Sbjct: 226 GRHIVNERKI 235


>AF098501-4|AAL38959.1|  336|Caenorhabditis elegans Hypothetical
           protein H28G03.1a protein.
          Length = 336

 Score = 36.3 bits (80), Expect = 0.021
 Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
 Frame = +2

Query: 158 GSRVYVGGLPFGVRERD-LEKFFKGFGRIRDILI---KNGYGFVEFEDYRDADDAVYELN 325
           G ++ + G+  GV   D L  +F+ FG +  + I     G GFV +ED   AD  +   +
Sbjct: 167 GCKLLLNGITNGVHSVDSLRVYFETFGTLDQVEILGQPRGLGFVIYEDKESADRCLAHNS 226

Query: 326 GKELLGERVV 355
           G+ ++ ER +
Sbjct: 227 GRHIVNERKI 236


>AL032631-4|CAE54917.1|  586|Caenorhabditis elegans Hypothetical
           protein Y106G6H.2c protein.
          Length = 586

 Score = 35.9 bits (79), Expect = 0.027
 Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
 Frame = +2

Query: 149 KMVGSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI-------KNGYGFVEFEDYRDADD 307
           K  G  +YV  L   V +  L+K F+ +G I    +         G+GFV FE   +A  
Sbjct: 253 KYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATS 312

Query: 308 AVYELNGKELLGERVVVEPA-RGIDRSA 388
           AV E+N K +  + + V  A R  DR A
Sbjct: 313 AVTEMNSKMVCSKPLYVAIAQRKEDRRA 340


>AL032631-3|CAE54916.1|  583|Caenorhabditis elegans Hypothetical
           protein Y106G6H.2b protein.
          Length = 583

 Score = 35.9 bits (79), Expect = 0.027
 Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
 Frame = +2

Query: 149 KMVGSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI-------KNGYGFVEFEDYRDADD 307
           K  G  +YV  L   V +  L+K F+ +G I    +         G+GFV FE   +A  
Sbjct: 250 KYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATS 309

Query: 308 AVYELNGKELLGERVVVEPA-RGIDRSA 388
           AV E+N K +  + + V  A R  DR A
Sbjct: 310 AVTEMNSKMVCSKPLYVAIAQRKEDRRA 337



 Score = 34.3 bits (75), Expect = 0.083
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = +2

Query: 263 GYGFVEFEDYRDADDAVYELNGKELLGERVVV 358
           GYGFV FE    A +A+ ++NG  L G++V V
Sbjct: 98  GYGFVHFETEEAAQNAIQKVNGMLLAGKKVFV 129


>AL032631-2|CAA21572.1|  646|Caenorhabditis elegans Hypothetical
           protein Y106G6H.2a protein.
          Length = 646

 Score = 35.9 bits (79), Expect = 0.027
 Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
 Frame = +2

Query: 149 KMVGSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI-------KNGYGFVEFEDYRDADD 307
           K  G  +YV  L   V +  L+K F+ +G I    +         G+GFV FE   +A  
Sbjct: 313 KYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATS 372

Query: 308 AVYELNGKELLGERVVVEPA-RGIDRSA 388
           AV E+N K +  + + V  A R  DR A
Sbjct: 373 AVTEMNSKMVCSKPLYVAIAQRKEDRRA 400



 Score = 34.3 bits (75), Expect = 0.083
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = +2

Query: 263 GYGFVEFEDYRDADDAVYELNGKELLGERVVV 358
           GYGFV FE    A +A+ ++NG  L G++V V
Sbjct: 161 GYGFVHFETEEAAQNAIQKVNGMLLAGKKVFV 192


>Z99279-4|CAB16494.1|  121|Caenorhabditis elegans Hypothetical
           protein Y57G11A.5 protein.
          Length = 121

 Score = 35.5 bits (78), Expect = 0.036
 Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 14/94 (14%)
 Frame = +2

Query: 164 RVYVGGLPFGVRERDL-----------EKFFKGFGRIRDILIKN---GYGFVEFEDYRDA 301
           +VYVG +PF   E++L           E  F   G I+ I +     G+ FV F+    A
Sbjct: 18  QVYVGNMPFDATEKELNNDALTIYDAIEAVFSVMGPIKSIWMAKRPPGFAFVTFKRTVHA 77

Query: 302 DDAVYELNGKELLGERVVVEPARGIDRSADRYRR 403
            DAV  LNGK++      VE    +D   D  RR
Sbjct: 78  FDAVKYLNGKKICDLEAKVEMCE-VDFKEDLRRR 110


>Z92826-4|CAB07322.1|  309|Caenorhabditis elegans Hypothetical
           protein C18D11.4 protein.
          Length = 309

 Score = 35.5 bits (78), Expect = 0.036
 Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
 Frame = +2

Query: 488 VENLSSRISWQDLKDYMRQAGEVTYAD-----AHKQHRNEGVVEFATHSDMRAAIEKLDG 652
           V NLSS  + +DL+D   + GE+   D          R  G + F    D  AA +KL  
Sbjct: 80  VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCN 139

Query: 653 TELNGRRVRL 682
           T+L+G ++R+
Sbjct: 140 TDLDGHKIRV 149


>AL110485-8|CAB60356.1|  434|Caenorhabditis elegans Hypothetical
           protein Y46G5A.13 protein.
          Length = 434

 Score = 35.1 bits (77), Expect = 0.047
 Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
 Frame = +2

Query: 167 VYVGGLPFGVRERDLEKFFKGFGRIRDI-LIK-NGYGFVEFEDYRDADDAVYELNGKELL 340
           VYVG +   + E ++ + F  FG I ++   K  GY FV+FE    A  A+ ++N  ++ 
Sbjct: 258 VYVGNIA-NLGEDEIRRAFDRFGPINEVRTFKIQGYAFVKFETKESAARAIVQMNNADIG 316

Query: 341 GERV 352
           G+ V
Sbjct: 317 GQIV 320



 Score = 34.7 bits (76), Expect = 0.063
 Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 5/147 (3%)
 Frame = +2

Query: 254 IKNGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGIDRSADRYRRGDRHXXXXXX 433
           + + Y FVEF D+  A  A+   NG+ELL      E    +  + +    G+        
Sbjct: 76  LNDPYAFVEFSDHNQATLALQSHNGRELL------EKEMHVTWAFEPREPGENR------ 123

Query: 434 XXXXXXXXPPTRTEYRLIVENLSSRISWQDLKDYMRQAGEVTYADAHKQH-----RNEGV 598
                   P T   + + V +L S I    L++   + GEV+ A   + +     +  G 
Sbjct: 124 ------SKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGF 177

Query: 599 VEFATHSDMRAAIEKLDGTELNGRRVR 679
           V +    D   AI++++G  L  R +R
Sbjct: 178 VSYPRREDAERAIDEMNGAWLGRRTIR 204



 Score = 33.9 bits (74), Expect = 0.11
 Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
 Frame = +2

Query: 167 VYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYEL 322
           V+VG L   +    L + F  FG + +  I          GYGFV +    DA+ A+ E+
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEM 193

Query: 323 NGKELLGERVVVEPARGIDRSADRYRRGDR 412
           NG   LG R +           D  R GDR
Sbjct: 194 NG-AWLGRRTIRTNWATRKPDEDGERGGDR 222


>U24123-1|AAA65224.1|  646|Caenorhabditis elegans
           polyadenylate-binding protein protein.
          Length = 646

 Score = 34.7 bits (76), Expect = 0.063
 Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
 Frame = +2

Query: 149 KMVGSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI-------KNGYGFVEFEDYRDADD 307
           K  G  +YV  L   V +  L+K F+ +G I    +         G+GFV FE   +A  
Sbjct: 313 KYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATS 372

Query: 308 AVYELNGKELLGERVVV 358
           AV E+N K +  + + V
Sbjct: 373 AVTEMNSKMVCSKPLYV 389



 Score = 34.3 bits (75), Expect = 0.083
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = +2

Query: 263 GYGFVEFEDYRDADDAVYELNGKELLGERVVV 358
           GYGFV FE    A +A+ ++NG  L G++V V
Sbjct: 161 GYGFVHFETEEAAQNAIQKVNGMLLAGKKVFV 192


>D10877-1|BAA01645.1|  346|Caenorhabditis elegans hnRNP like protein
           protein.
          Length = 346

 Score = 34.3 bits (75), Expect = 0.083
 Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
 Frame = +2

Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYE 319
           +++VGGL     +  + +F+  FG I DI++          G+GFV F    + D A+ +
Sbjct: 24  KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83

Query: 320 LNGKELLGERVVVEPARGIDR 382
              +  + +   V+P R + R
Sbjct: 84  ---RPHIIDGKTVDPKRAVPR 101



 Score = 27.5 bits (58), Expect = 9.5
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
 Frame = +2

Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRD---ILIK-----NGYGFVEFEDYRDADDAVYE 319
           R+YV G+     E  L ++F  +G +     IL K      G+GFV F+D+   D  V +
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 174


>AF038613-6|ABB51186.1|  347|Caenorhabditis elegans Human hnrnp a1
           homolog protein1, isoform d protein.
          Length = 347

 Score = 34.3 bits (75), Expect = 0.083
 Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
 Frame = +2

Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYE 319
           +++VGGL     +  + +F+  FG I DI++          G+GFV F    + D A+ +
Sbjct: 24  KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83

Query: 320 LNGKELLGERVVVEPARGIDR 382
              +  + +   V+P R + R
Sbjct: 84  ---RPHIIDGKTVDPKRAVPR 101



 Score = 27.5 bits (58), Expect = 9.5
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
 Frame = +2

Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRD---ILIK-----NGYGFVEFEDYRDADDAVYE 319
           R+YV G+     E  L ++F  +G +     IL K      G+GFV F+D+   D  V +
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 174


>AF038613-5|AAB92051.1|  346|Caenorhabditis elegans Human hnrnp a1
           homolog protein1, isoform a protein.
          Length = 346

 Score = 34.3 bits (75), Expect = 0.083
 Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
 Frame = +2

Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYE 319
           +++VGGL     +  + +F+  FG I DI++          G+GFV F    + D A+ +
Sbjct: 24  KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83

Query: 320 LNGKELLGERVVVEPARGIDR 382
              +  + +   V+P R + R
Sbjct: 84  ---RPHIIDGKTVDPKRAVPR 101



 Score = 27.5 bits (58), Expect = 9.5
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
 Frame = +2

Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRD---ILIK-----NGYGFVEFEDYRDADDAVYE 319
           R+YV G+     E  L ++F  +G +     IL K      G+GFV F+D+   D  V +
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 174


>Z77669-6|CAB01243.2|  371|Caenorhabditis elegans Hypothetical
           protein T07F10.3 protein.
          Length = 371

 Score = 33.5 bits (73), Expect = 0.14
 Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
 Frame = +2

Query: 167 VYVGGLPFGVRERDLEKFFKGFG----RIRDILIKN---GYGFVEFEDYRDADDAVYELN 325
           +++G +P    E  L + F   G    +++ + +K+   GY F+EF  + +A   +Y+LN
Sbjct: 70  LWIGDVPTDWTEETLSQVFTECGHAPYKVKRVYVKDELKGYCFIEFITFDEARQTLYDLN 129

Query: 326 GKELLG 343
           G  + G
Sbjct: 130 GNRIPG 135


>U23450-1|AAK31467.2|  422|Caenorhabditis elegans Cpeb polya binding
           family protein 2 protein.
          Length = 422

 Score = 33.5 bits (73), Expect = 0.14
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +2

Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIR 244
           +V+VGGLP  V+E D+  FF  +GR++
Sbjct: 89  KVFVGGLPSCVKESDILNFFSRYGRLQ 115


>U23172-15|AAN63408.1|  374|Caenorhabditis elegans Hypothetical
           protein F25B5.7d protein.
          Length = 374

 Score = 33.1 bits (72), Expect = 0.19
 Identities = 18/68 (26%), Positives = 35/68 (51%)
 Frame = +2

Query: 479 RLIVENLSSRISWQDLKDYMRQAGEVTYADAHKQHRNEGVVEFATHSDMRAAIEKLDGTE 658
           RL V NL + +   +LK+     G++  A+ +   +    +   T +   +A E +DG  
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDI--AECYLSGKGFAFLRLDTRAHAESAKEAIDGRI 174

Query: 659 LNGRRVRL 682
           ++GR+VR+
Sbjct: 175 IHGRQVRV 182


>U23172-12|ABH03526.1|  562|Caenorhabditis elegans Hypothetical
           protein F25B5.7a protein.
          Length = 562

 Score = 33.1 bits (72), Expect = 0.19
 Identities = 18/68 (26%), Positives = 35/68 (51%)
 Frame = +2

Query: 479 RLIVENLSSRISWQDLKDYMRQAGEVTYADAHKQHRNEGVVEFATHSDMRAAIEKLDGTE 658
           RL V NL + +   +LK+     G++  A+ +   +    +   T +   +A E +DG  
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDI--AECYLSGKGFAFLRLDTRAHAESAKEAIDGRI 174

Query: 659 LNGRRVRL 682
           ++GR+VR+
Sbjct: 175 IHGRQVRV 182


>AC084197-23|AAM44389.1|  610|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.33 protein.
          Length = 610

 Score = 33.1 bits (72), Expect = 0.19
 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
 Frame = +2

Query: 179 GLPFGVRERDLEKFFKG--FGRIRDILI---KNGYGFVEFEDYRDADDAVYELNGKELLG 343
           GLPF   E+D+ +FF G    R++ +      NG  +VEF++  +A  A+ E + KE+  
Sbjct: 70  GLPFNATEKDIHEFFAGLTIERVKFVCTTGRPNGEAYVEFKNTEEAGKAM-ENDRKEISN 128

Query: 344 ERVVV 358
             + V
Sbjct: 129 RYIEV 133


>Z83119-2|CAB05579.2|  608|Caenorhabditis elegans Hypothetical
           protein R05H10.2 protein.
          Length = 608

 Score = 32.7 bits (71), Expect = 0.25
 Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
 Frame = +2

Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILIKN---------GYGFVEFEDYRDADDAVY 316
           R+ +  LPF  ++ DL+      G+  +I++           G+GF++F +  DA+    
Sbjct: 96  RLIIRNLPFKTKKEDLQNLCSNIGKFVEIVLPPSRKDPKTCAGFGFIQFVEKADAEKGRE 155

Query: 317 ELNGKELLGERVVVE 361
             N  ++LG  V  +
Sbjct: 156 FFNTNKVLGRSVAAD 170


>U23450-2|AAK31468.1|  302|Caenorhabditis elegans Hypothetical
           protein C30B5.4 protein.
          Length = 302

 Score = 32.3 bits (70), Expect = 0.33
 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
 Frame = +2

Query: 167 VYVGGLPFGVRERDLEKFFKGFGRIRDI-LIKN-------GYGFVEFEDYRDADDAVYEL 322
           +Y+GGL + + E D+   F  +G + +I LI++       G+ F+ ++D R    AV   
Sbjct: 40  IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNF 99

Query: 323 NGKEL 337
           NG  L
Sbjct: 100 NGISL 104


>AL032626-17|CAA21536.1|  282|Caenorhabditis elegans Hypothetical
           protein Y37D8A.21 protein.
          Length = 282

 Score = 32.3 bits (70), Expect = 0.33
 Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
 Frame = +2

Query: 167 VYVGGLPFGVRERDLEKFFKGFGRI-----RDILIKNG-YGFVEFEDYRDADDAVYELNG 328
           +YV      V E  LE+ F   G +     RD+   N  +  VEFED      A+  +NG
Sbjct: 15  IYVANFSEEVDEELLEELFIQAGPVVKVILRDVRDSNAKFALVEFEDELSVLFAIELMNG 74

Query: 329 KELLGERVVVEPARGIDRSADRYRR 403
             L  + + V+P  G ++  + Y+R
Sbjct: 75  VRLFNQELQVKPRNGTNQE-ELYKR 98


>Z35601-1|CAA84667.2|  320|Caenorhabditis elegans Hypothetical
           protein R10E9.1 protein.
          Length = 320

 Score = 31.9 bits (69), Expect = 0.44
 Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 12/70 (17%)
 Frame = +2

Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAV-- 313
           ++++GGL +     +L  +F  FG + + ++          G+GF+ F D    D  +  
Sbjct: 46  KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNN 105

Query: 314 --YELNGKEL 337
             +EL+GK++
Sbjct: 106 REHELDGKKI 115


>AB036738-1|BAB13470.1|  320|Caenorhabditis elegans neural
           RNA-binding protein MSI-1 protein.
          Length = 320

 Score = 31.9 bits (69), Expect = 0.44
 Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 12/70 (17%)
 Frame = +2

Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAV-- 313
           ++++GGL +     +L  +F  FG + + ++          G+GF+ F D    D  +  
Sbjct: 46  KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNN 105

Query: 314 --YELNGKEL 337
             +EL+GK++
Sbjct: 106 REHELDGKKI 115


>Z50110-2|CAA90446.1|  566|Caenorhabditis elegans Hypothetical
           protein F18H3.3b protein.
          Length = 566

 Score = 31.5 bits (68), Expect = 0.58
 Identities = 36/144 (25%), Positives = 56/144 (38%), Gaps = 4/144 (2%)
 Frame = +2

Query: 263 GYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGIDRSADRYRRGDRHXXXXXXXXX 442
           GYGFV FE    A  A+ ++NG  L  ++V V   +   R+      G+           
Sbjct: 186 GYGFVHFETEHSAQTAIEKVNGMLLSDKKVYV--GKFQPRAQRMKELGESGLKYT----- 238

Query: 443 XXXXXPPTRTEYRLIVENLSSRISWQDLKDYMRQAGEVTYA----DAHKQHRNEGVVEFA 610
                        + V+N    +  + L     + GE+T A    DA  + +  G V FA
Sbjct: 239 ------------NVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFA 286

Query: 611 THSDMRAAIEKLDGTELNGRRVRL 682
                  A+EKL+ + L G   +L
Sbjct: 287 DQDAAGQAVEKLNDSILEGTDCKL 310


>Z50110-1|CAA90444.1|  692|Caenorhabditis elegans Hypothetical
           protein F18H3.3a protein.
          Length = 692

 Score = 31.5 bits (68), Expect = 0.58
 Identities = 36/144 (25%), Positives = 56/144 (38%), Gaps = 4/144 (2%)
 Frame = +2

Query: 263 GYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGIDRSADRYRRGDRHXXXXXXXXX 442
           GYGFV FE    A  A+ ++NG  L  ++V V   +   R+      G+           
Sbjct: 186 GYGFVHFETEHSAQTAIEKVNGMLLSDKKVYV--GKFQPRAQRMKELGESGLKYT----- 238

Query: 443 XXXXXPPTRTEYRLIVENLSSRISWQDLKDYMRQAGEVTYA----DAHKQHRNEGVVEFA 610
                        + V+N    +  + L     + GE+T A    DA  + +  G V FA
Sbjct: 239 ------------NVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFA 286

Query: 611 THSDMRAAIEKLDGTELNGRRVRL 682
                  A+EKL+ + L G   +L
Sbjct: 287 DQDAAGQAVEKLNDSILEGTDCKL 310


>Z81084-7|CAB03111.1|  312|Caenorhabditis elegans Hypothetical
           protein F46A9.6 protein.
          Length = 312

 Score = 31.1 bits (67), Expect = 0.77
 Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 9/63 (14%)
 Frame = +2

Query: 167 VYVGGLPFGVRERDLEKFFKGF----GRIRDILIKNG-----YGFVEFEDYRDADDAVYE 319
           ++V GLP   + R+L   F+G     G +  +  KNG      GFV F   +DA DA   
Sbjct: 33  LFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPTSPVGFVTFLSQQDAQDARKM 92

Query: 320 LNG 328
           L G
Sbjct: 93  LQG 95


>Z81037-10|CAB02754.1|  312|Caenorhabditis elegans Hypothetical
           protein F46A9.6 protein.
          Length = 312

 Score = 31.1 bits (67), Expect = 0.77
 Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 9/63 (14%)
 Frame = +2

Query: 167 VYVGGLPFGVRERDLEKFFKGF----GRIRDILIKNG-----YGFVEFEDYRDADDAVYE 319
           ++V GLP   + R+L   F+G     G +  +  KNG      GFV F   +DA DA   
Sbjct: 33  LFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPTSPVGFVTFLSQQDAQDARKM 92

Query: 320 LNG 328
           L G
Sbjct: 93  LQG 95


>Z36238-4|CAD82915.1|  286|Caenorhabditis elegans Hypothetical
           protein R74.5b protein.
          Length = 286

 Score = 31.1 bits (67), Expect = 0.77
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = +2

Query: 263 GYGFVEFEDYRDADDAVYELNGKELLGERVVVEPA 367
           G+GFV  ++  DAD A  E NG  + G RV V  A
Sbjct: 22  GFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLA 56


>X95609-1|CAA64867.1|  312|Caenorhabditis elegans mec-8 protein.
          Length = 312

 Score = 31.1 bits (67), Expect = 0.77
 Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 9/63 (14%)
 Frame = +2

Query: 167 VYVGGLPFGVRERDLEKFFKGF----GRIRDILIKNG-----YGFVEFEDYRDADDAVYE 319
           ++V GLP   + R+L   F+G     G +  +  KNG      GFV F   +DA DA   
Sbjct: 33  LFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPTSPVGFVTFLSQQDAQDARKM 92

Query: 320 LNG 328
           L G
Sbjct: 93  LQG 95


>X95608-1|CAA64866.1|  312|Caenorhabditis elegans mec-8 protein.
          Length = 312

 Score = 31.1 bits (67), Expect = 0.77
 Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 9/63 (14%)
 Frame = +2

Query: 167 VYVGGLPFGVRERDLEKFFKGF----GRIRDILIKNG-----YGFVEFEDYRDADDAVYE 319
           ++V GLP   + R+L   F+G     G +  +  KNG      GFV F   +DA DA   
Sbjct: 33  LFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPTSPVGFVTFLSQQDAQDARKM 92

Query: 320 LNG 328
           L G
Sbjct: 93  LQG 95


>AF067616-7|AAM98029.1|  423|Caenorhabditis elegans Hypothetical
           protein F29C4.7b protein.
          Length = 423

 Score = 31.1 bits (67), Expect = 0.77
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
 Frame = +2

Query: 167 VYVGGLPFGVRERDLEKFFKGFGRIRDILIKN------GYGFVEFEDYRDADDAVYE 319
           ++VG +P  V+ER++   F+  G++ ++ IK        Y FV F+    A  A  E
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQAKAE 227


>AF067616-6|AAC19192.1|  520|Caenorhabditis elegans Hypothetical
           protein F29C4.7a protein.
          Length = 520

 Score = 31.1 bits (67), Expect = 0.77
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
 Frame = +2

Query: 167 VYVGGLPFGVRERDLEKFFKGFGRIRDILIKN------GYGFVEFEDYRDADDAVYE 319
           ++VG +P  V+ER++   F+  G++ ++ IK        Y FV F+    A  A  E
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQAKAE 227


>AF067616-5|AAU05574.1|  497|Caenorhabditis elegans Hypothetical
           protein F29C4.7c protein.
          Length = 497

 Score = 31.1 bits (67), Expect = 0.77
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
 Frame = +2

Query: 167 VYVGGLPFGVRERDLEKFFKGFGRIRDILIKN------GYGFVEFEDYRDADDAVYE 319
           ++VG +P  V+ER++   F+  G++ ++ IK        Y FV F+    A  A  E
Sbjct: 148 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQAKAE 204


>Z81120-1|CAB03342.1|  207|Caenorhabditis elegans Hypothetical
           protein T12D8.2 protein.
          Length = 207

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
 Frame = +2

Query: 200 ERDLEKFFKGFGRIRDILIKNGYGFVEFEDYRDADDAVYELNGKELLGERVV-VEPARGI 376
           + +L+KF       RD     G+ +V FE+ +  + A+  LNG +  G RV+ V  A+  
Sbjct: 33  DEELKKFDIHLVHDRDSGSFKGFAYVTFENEQQMNTAISGLNGAD-FGNRVLKVNRAQQR 91

Query: 377 DRSADRYRRGDR 412
           DRS     RG R
Sbjct: 92  DRSDRGGGRGGR 103


>U23484-11|AAC46764.2|  191|Caenorhabditis elegans Hypothetical
           protein EEED8.4 protein.
          Length = 191

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
 Frame = +2

Query: 167 VYVGGLPFGVRERDLEKFFKGFGRI------RDILIK--NGYGFVEFEDYRDADDAVYEL 322
           V++G + F     ++E+ FKG G+I      +D   K    + ++EF+D    ++A+  +
Sbjct: 57  VFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENALV-M 115

Query: 323 NGKELLGERVVVEPAR 370
           NG       +VV   R
Sbjct: 116 NGSLFRSRPIVVTAKR 131


>AL033514-34|CAA22113.1|  463|Caenorhabditis elegans Hypothetical
           protein Y75B8A.35b protein.
          Length = 463

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +2

Query: 257 KNGYGFVEFEDYRDADDAVYELNGKELLGERVVV 358
           +NGYGFV+F+ +       Y  N  E L +R+ +
Sbjct: 129 ENGYGFVDFQPFAQQQQPAYNGNEPEFLIQRMQI 162


>AL033514-33|CAB54500.1|  480|Caenorhabditis elegans Hypothetical
           protein Y75B8A.35a protein.
          Length = 480

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +2

Query: 257 KNGYGFVEFEDYRDADDAVYELNGKELLGERVVV 358
           +NGYGFV+F+ +       Y  N  E L +R+ +
Sbjct: 146 ENGYGFVDFQPFAQQQQPAYNGNEPEFLIQRMQI 179


>AF160493-1|AAD43348.1|  465|Caenorhabditis elegans DNA-binding
           protein ZIP-1 protein.
          Length = 465

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +2

Query: 257 KNGYGFVEFEDYRDADDAVYELNGKELLGERVVV 358
           +NGYGFV+F+ +       Y  N  E L +R+ +
Sbjct: 146 ENGYGFVDFQPFAQQQQPAYNGNEPEFLIQRMQI 179


>AF160492-1|AAD43347.1|  463|Caenorhabditis elegans DNA-binding
           protein ZIP-1 protein.
          Length = 463

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +2

Query: 257 KNGYGFVEFEDYRDADDAVYELNGKELLGERVVV 358
           +NGYGFV+F+ +       Y  N  E L +R+ +
Sbjct: 129 ENGYGFVDFQPFAQQQQPAYNGNEPEFLIQRMQI 162


>AC024818-2|AAF60781.1|  302|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 262 protein.
          Length = 302

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
 Frame = +2

Query: 146 WKMVGSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDA 301
           W     RV+ G L   V +  L K F+ +   +   +          GYGFV F D  D 
Sbjct: 198 WDENDFRVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDY 257

Query: 302 DDAVYELNGKELLGERVVVEPARGIDRSAD 391
             A+ E++GK +    + +  +   +R+ D
Sbjct: 258 VRAMREMDGKYVGNRPIKLRKSAWKERNID 287


>Z81473-3|CAB03896.4|  514|Caenorhabditis elegans Hypothetical
           protein C17D12.2 protein.
          Length = 514

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 12/36 (33%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = +2

Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDI-LIKNGY 268
           +++VG +P  + E+DL   F+ FG+I +  ++K+ Y
Sbjct: 30  KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKY 65


>U23484-10|AAC46772.1|  197|Caenorhabditis elegans Hypothetical
           protein EEED8.12 protein.
          Length = 197

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
 Frame = +2

Query: 167 VYVGGLPFGVRERDLEKFFKGFGRI------RDILIK--NGYGFVEFEDYRDADDAVYEL 322
           V++G + F     ++E+ FKG G I      +D   K    + ++EF+D    ++A+  +
Sbjct: 63  VFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENALV-M 121

Query: 323 NGKELLGERVVVEPAR 370
           NG       +VV   R
Sbjct: 122 NGSLFRSRPIVVTAKR 137


>AY342388-1|AAQ19851.1|  514|Caenorhabditis elegans putative
           RNA-binding protein protein.
          Length = 514

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 12/36 (33%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = +2

Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDI-LIKNGY 268
           +++VG +P  + E+DL   F+ FG+I +  ++K+ Y
Sbjct: 30  KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKY 65


>Z83127-4|CAB05631.1|  872|Caenorhabditis elegans Hypothetical
           protein T23F6.4 protein.
          Length = 872

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
 Frame = +2

Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRDILIK--------NGYGFVEFEDYRDADDAVYE 319
           R+++  LP+  +E DL+  FK +G + ++ +          G+  VEF     A  A   
Sbjct: 280 RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSA 339

Query: 320 LNGKELLGERVVVEP 364
           L+G    G  + + P
Sbjct: 340 LDGYVFKGRMMHILP 354


>Z35663-4|CAA84724.1|  307|Caenorhabditis elegans Hypothetical
           protein T04A8.6 protein.
          Length = 307

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
 Frame = +2

Query: 167 VYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYEL 322
           V +  +PFG  E++L  +F+ FG +  I +          G+ +V F++   A+ A   +
Sbjct: 34  VKIKRIPFGFFEKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAVAEIAAESM 93

Query: 323 NGKELLGERV 352
           NG  +  +R+
Sbjct: 94  NGYLMFEQRL 103


>U80455-2|AAB37882.2|  420|Caenorhabditis elegans Elav-type rna
           binding protein familyprotein 1, isoform b protein.
          Length = 420

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
 Frame = +2

Query: 158 GSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAV 313
           G+ +++  LP    + DL   F  FG I    +           +GFV +E+ + A +A+
Sbjct: 334 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 393

Query: 314 YELNGKELLGERVVVE 361
             +NG ++  +R+ V+
Sbjct: 394 SAMNGFQIGSKRLKVQ 409


>U80455-1|AAB37881.1|  584|Caenorhabditis elegans Elav-type rna
           binding protein familyprotein 1, isoform a protein.
          Length = 584

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
 Frame = +2

Query: 158 GSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAV 313
           G+ +++  LP    + DL   F  FG I    +           +GFV +E+ + A +A+
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 557

Query: 314 YELNGKELLGERVVVE 361
             +NG ++  +R+ V+
Sbjct: 558 SAMNGFQIGSKRLKVQ 573


>U53931-1|AAA98566.1|  584|Caenorhabditis elegans elav-type
           ribonucleoprotein protein.
          Length = 584

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
 Frame = +2

Query: 158 GSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAV 313
           G+ +++  LP    + DL   F  FG I    +           +GFV +E+ + A +A+
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 557

Query: 314 YELNGKELLGERVVVE 361
             +NG ++  +R+ V+
Sbjct: 558 SAMNGFQIGSKRLKVQ 573


>EF523770-1|ABS18836.1|  513|Caenorhabditis elegans ELAV-type RNA
           binding protein variantE protein.
          Length = 513

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
 Frame = +2

Query: 158 GSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAV 313
           G+ +++  LP    + DL   F  FG I    +           +GFV +E+ + A +A+
Sbjct: 427 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 486

Query: 314 YELNGKELLGERVVVE 361
             +NG ++  +R+ V+
Sbjct: 487 SAMNGFQIGSKRLKVQ 502


>EF523766-1|ABS18832.1|  584|Caenorhabditis elegans ELAV-type RNA
           binding protein variantA protein.
          Length = 584

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
 Frame = +2

Query: 158 GSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAV 313
           G+ +++  LP    + DL   F  FG I    +           +GFV +E+ + A +A+
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 557

Query: 314 YELNGKELLGERVVVE 361
             +NG ++  +R+ V+
Sbjct: 558 SAMNGFQIGSKRLKVQ 573


>AF099918-1|AAK29840.2|  820|Caenorhabditis elegans Hypothetical
           protein H05C05.1a protein.
          Length = 820

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 19/74 (25%), Positives = 35/74 (47%)
 Frame = +2

Query: 461 PTRTEYRLIVENLSSRISWQDLKDYMRQAGEVTYADAHKQHRNEGVVEFATHSDMRAAIE 640
           PT   +R+ + N+SS+   ++L  Y      +   D  K+  N    E+ T   +  A++
Sbjct: 74  PTEPPFRVQITNISSQHVEEELIYYFGGESHIKRVDIRKEDGN-AEFEYFTRDGLLLALK 132

Query: 641 KLDGTELNGRRVRL 682
           K D  E  GR +++
Sbjct: 133 KQD-VEFKGRVLKV 145


>Z77654-1|CAB01127.1|  114|Caenorhabditis elegans Hypothetical
           protein C50B8.1 protein.
          Length = 114

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
 Frame = +2

Query: 149 KMVGSRVYVGGLPFGVRERDLEKFFKGFGRIR--------DILIKNGYGFVEFEDYRDAD 304
           K  G  VY+  + +   +  LE +FK +G I+        D  +  G+  + F D +D  
Sbjct: 21  KNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITF-DSKDGA 79

Query: 305 DAVYELNGKELLGERVVVEP 364
           +   E     + G+RV VEP
Sbjct: 80  NKAIEQRPHVIDGDRVDVEP 99


>Z50176-3|CAA90540.1|  196|Caenorhabditis elegans Hypothetical
           protein C09G1.3 protein.
          Length = 196

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -2

Query: 319 LVHSIICISV-IFKFNKTISILDKYVSDSSKTFEELFQVSLSYSKGETTN 173
           L  +++C    +F+F + I ILD+Y+   SK    L  VS    +GE +N
Sbjct: 81  LPRNVVCSGAELFQFAEKIRILDEYL--KSKDLTLLQDVSKQIKRGENSN 128


>Z97628-2|CAB10726.2|  427|Caenorhabditis elegans Hypothetical
           protein F39H2.2a protein.
          Length = 427

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 16/70 (22%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
 Frame = +2

Query: 200 ERDLEKFFKGFGRIRDILI----KNG----YGFVEFEDYRDADDAVYELNGKELLGERVV 355
           + DLE  F  FG+I +  I    ++G    Y F+EF++ +  + A ++++   +   R+ 
Sbjct: 254 DEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIH 313

Query: 356 VEPARGIDRS 385
           V+ ++ + ++
Sbjct: 314 VDFSQSVSQN 323


>Z81080-5|CAB03088.2|  427|Caenorhabditis elegans Hypothetical
           protein F39H2.2a protein.
          Length = 427

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 16/70 (22%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
 Frame = +2

Query: 200 ERDLEKFFKGFGRIRDILI----KNG----YGFVEFEDYRDADDAVYELNGKELLGERVV 355
           + DLE  F  FG+I +  I    ++G    Y F+EF++ +  + A ++++   +   R+ 
Sbjct: 254 DEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIH 313

Query: 356 VEPARGIDRS 385
           V+ ++ + ++
Sbjct: 314 VDFSQSVSQN 323


>Z81080-2|CAD56584.1|  358|Caenorhabditis elegans Hypothetical
           protein F39H2.2b protein.
          Length = 358

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 16/70 (22%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
 Frame = +2

Query: 200 ERDLEKFFKGFGRIRDILI----KNG----YGFVEFEDYRDADDAVYELNGKELLGERVV 355
           + DLE  F  FG+I +  I    ++G    Y F+EF++ +  + A ++++   +   R+ 
Sbjct: 185 DEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIH 244

Query: 356 VEPARGIDRS 385
           V+ ++ + ++
Sbjct: 245 VDFSQSVSQN 254


>AJ297847-1|CAC16732.1|  619|Caenorhabditis elegans FOG-1 protein
           protein.
          Length = 619

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +2

Query: 149 KMVGSRVYVGGLPFGVRERDLEKFFKGFGRI 241
           ++V ++V+VGG+   +  + + KFF  FG +
Sbjct: 201 RVVSNKVFVGGISHMMNRKIINKFFGQFGTV 231


>AJ297846-1|CAC16731.1|  619|Caenorhabditis elegans FOG-1 protein
           protein.
          Length = 619

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +2

Query: 149 KMVGSRVYVGGLPFGVRERDLEKFFKGFGRI 241
           ++V ++V+VGG+   +  + + KFF  FG +
Sbjct: 201 RVVSNKVFVGGISHMMNRKIINKFFGQFGTV 231


>AC024810-12|AAK68519.1|  619|Caenorhabditis elegans Feminization of
           germline protein1, isoform b protein.
          Length = 619

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +2

Query: 149 KMVGSRVYVGGLPFGVRERDLEKFFKGFGRI 241
           ++V ++V+VGG+   +  + + KFF  FG +
Sbjct: 201 RVVSNKVFVGGISHMMNRKIINKFFGQFGTV 231


>Z66512-2|CAA91323.1|  387|Caenorhabditis elegans Hypothetical
           protein F52H3.3 protein.
          Length = 387

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +2

Query: 260 NGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGIDRSADRYRRG 406
           N +GF  F  + D +++ Y  N    +  RVVV+   G+ R+  +Y  G
Sbjct: 174 NNWGFPSFMAWEDVNNSNYVRNEMVTVTARVVVQKVLGV-RNVPKYDFG 221


>Z19154-9|CAA79552.2|  559|Caenorhabditis elegans Hypothetical
           protein C40H1.1 protein.
          Length = 559

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +2

Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRI 241
           +V++GGLP  V E  +   F  FG++
Sbjct: 246 KVFIGGLPIDVSEEQVWATFGAFGKV 271


>AF038613-8|AAL02515.2|  309|Caenorhabditis elegans Human hnrnp a1
           homolog protein1, isoform b protein.
          Length = 309

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
 Frame = +2

Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRD---ILIK-----NGYGFVEFEDYRDADDAVYE 319
           R+YV G+     E  L ++F  +G +     IL K      G+GFV F+D+   D  V +
Sbjct: 77  RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 136


>AF038613-7|ABB51185.1|  308|Caenorhabditis elegans Human hnrnp a1
           homolog protein1, isoform c protein.
          Length = 308

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
 Frame = +2

Query: 164 RVYVGGLPFGVRERDLEKFFKGFGRIRD---ILIK-----NGYGFVEFEDYRDADDAVYE 319
           R+YV G+     E  L ++F  +G +     IL K      G+GFV F+D+   D  V +
Sbjct: 77  RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 136


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,901,522
Number of Sequences: 27780
Number of extensions: 263847
Number of successful extensions: 1010
Number of sequences better than 10.0: 122
Number of HSP's better than 10.0 without gapping: 879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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