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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0030
         (502 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70756-10|CAI46587.1|  228|Caenorhabditis elegans Hypothetical p...    33   0.12 
Z70284-9|CAA94280.1|  290|Caenorhabditis elegans Hypothetical pr...    29   1.4  
U41272-9|AAA82452.4| 1256|Caenorhabditis elegans Prion-like-(q/n...    29   1.9  
AF016426-4|AAB65343.1|  335|Caenorhabditis elegans Hypothetical ...    29   1.9  
Z66499-3|CAA91300.1|  348|Caenorhabditis elegans Hypothetical pr...    29   2.5  
M34451-1|AAA28143.1|  348|Caenorhabditis elegans protein ( C.ele...    29   2.5  
Z81124-1|CAB03369.1|  312|Caenorhabditis elegans Hypothetical pr...    28   4.4  
Z70756-12|CAA94796.2|  180|Caenorhabditis elegans Hypothetical p...    28   4.4  
Z70208-2|CAA94136.1|  304|Caenorhabditis elegans Hypothetical pr...    28   4.4  
AF040660-2|AAC71147.1|  302|Caenorhabditis elegans Collagen prot...    28   4.4  
AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical...    28   4.4  
Z74042-8|CAA98525.1|  299|Caenorhabditis elegans Hypothetical pr...    27   5.8  
AL117195-28|CAB55014.1|  458|Caenorhabditis elegans Hypothetical...    27   5.8  
AF067607-9|AAF98609.1|  460|Caenorhabditis elegans Collagen prot...    27   5.8  
Z74036-2|CAA98487.1|  266|Caenorhabditis elegans Hypothetical pr...    27   7.6  
Z74036-1|CAA98486.1|  299|Caenorhabditis elegans Hypothetical pr...    27   7.6  
Z69787-1|CAA93642.1|  300|Caenorhabditis elegans Hypothetical pr...    27   7.6  
U64609-1|AAB04598.1|  405|Caenorhabditis elegans Sperm-specific ...    27   7.6  
U58742-2|AAB36858.1|  239|Caenorhabditis elegans Helix loop heli...    27   7.6  
U50312-8|AAA92324.1|  294|Caenorhabditis elegans Collagen protei...    27   7.6  

>Z70756-10|CAI46587.1|  228|Caenorhabditis elegans Hypothetical
           protein T06E4.12 protein.
          Length = 228

 Score = 33.1 bits (72), Expect = 0.12
 Identities = 26/63 (41%), Positives = 33/63 (52%)
 Frame = +2

Query: 53  AAVPFAKPSVIAPVGLAGWAGHLSAPWGSHIATPLVAAAPVLGAHNYRGPLSLPPWQPAN 232
           AA  FA P   APV  A  A  L+AP    +A P+   AP++ A   R  L+ P + PA 
Sbjct: 86  AAPAFAAP---APVFAAPPAPVLAAP-APFLAPPVPPVAPIVSAFAPRPVLAAPAFAPAP 141

Query: 233 ILA 241
           ILA
Sbjct: 142 ILA 144


>Z70284-9|CAA94280.1|  290|Caenorhabditis elegans Hypothetical
           protein K07F5.11 protein.
          Length = 290

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
 Frame = -2

Query: 273 TLRVSSGLPSAAKILAGCHGGNERGPL*LCAPS---TGAAATKGVAIWEPHGADKCPAQP 103
           T+    G PS A  +    GG  RG   + A     TGA+    V    P GA    A  
Sbjct: 96  TMTALGGAPSGASTMTAV-GGAPRGASTMTAVGGAPTGASTMTAVG-GAPRGASTMTAVG 153

Query: 102 ARPTGAMTLGFANGTAAKEHNTSSLI 25
             PTGA T+  A G A  E +T + +
Sbjct: 154 GAPTGASTM-TAVGGAPGEASTMTAV 178


>U41272-9|AAA82452.4| 1256|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 62
           protein.
          Length = 1256

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = -1

Query: 487 CSVSQTSMTNRTGQPKWSNRCMGDQTCGRPVDSGYVRPRRCRSQN 353
           C + Q  +T+ T Q    N+C  +Q      +   +RP R  S N
Sbjct: 96  CQLQQNELTDNTHQSSQVNQCDYNQNMSEQSEQPILRPSRMESTN 140


>AF016426-4|AAB65343.1|  335|Caenorhabditis elegans Hypothetical
           protein W07B8.1 protein.
          Length = 335

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
 Frame = +1

Query: 43  VLLCCSTICEAQRHCSGGSSRLGWTLIRAMGLP----YRNTFSC 162
           +L CC+ +      C GG+    W  I+  G+P    Y + F C
Sbjct: 134 LLSCCTGMFSCGEGCEGGNPFKAWQYIQKHGIPTGGSYESQFGC 177


>Z66499-3|CAA91300.1|  348|Caenorhabditis elegans Hypothetical
           protein T01B7.7 protein.
          Length = 348

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = -2

Query: 489 CAACPKPQ*PTGPASPSGAIGAWATKRAAGQSTR 388
           C  CP  Q P GP  P+GA G    + A GQ  R
Sbjct: 190 CFTCP--QGPLGPQGPNGAPGLRGMRGARGQPGR 221


>M34451-1|AAA28143.1|  348|Caenorhabditis elegans protein (
           C.elegans collagen (rol-6) gene, complete cds. ).
          Length = 348

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = -2

Query: 489 CAACPKPQ*PTGPASPSGAIGAWATKRAAGQSTR 388
           C  CP  Q P GP  P+GA G    + A GQ  R
Sbjct: 190 CFTCP--QGPLGPQGPNGAPGLRGMRGARGQPGR 221


>Z81124-1|CAB03369.1|  312|Caenorhabditis elegans Hypothetical
           protein T21B4.2 protein.
          Length = 312

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 19/45 (42%), Positives = 22/45 (48%)
 Frame = -2

Query: 456 GPASPSGAIGAWATKRAAGQSTRAT*DHAAAGARTAERFFKRCTP 322
           GPA P GA G   T  AAG   +A  D A+  A +A  F   C P
Sbjct: 128 GPAGPPGADGNPGTDGAAGNPGQAGAD-ASQDAPSASDFCFDCPP 171


>Z70756-12|CAA94796.2|  180|Caenorhabditis elegans Hypothetical
           protein T06E4.10 protein.
          Length = 180

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
 Frame = +2

Query: 53  AAVPFAKPSVIAPVGLAGWAGHLSAPWGSHIATPLVAAAPVLGAHNYRG------PLSLP 214
           AA P   P+      +A       A   + +A+P++AAAP L A +  G      P   P
Sbjct: 87  AAAPALAPAYAPAPVVAAAPAFAPAYAPAPVASPMIAAAPALAAASINGLPVAAAPAFAP 146

Query: 215 PWQPANILAA 244
            + PA + AA
Sbjct: 147 AFAPAAVPAA 156


>Z70208-2|CAA94136.1|  304|Caenorhabditis elegans Hypothetical
           protein F54B11.2 protein.
          Length = 304

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -2

Query: 477 PKPQ*PTGPASPSGAIGAWATKRAAGQSTRAT*DHAAA 364
           P P  P+GPA P+G  GA  T    G +  +T    AA
Sbjct: 186 PGPPGPSGPAGPAGNDGAAGTPGPDGPAGESTYPEPAA 223


>AF040660-2|AAC71147.1|  302|Caenorhabditis elegans Collagen protein
           88 protein.
          Length = 302

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = -2

Query: 486 AACPKPQ*PTGPASPSGAIGAWATKRAAGQ 397
           A  P PQ P GPA   GA G   +  A GQ
Sbjct: 141 AGAPGPQGPDGPAGAPGADGQAGSPGAPGQ 170


>AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical
           protein F15E6.1 protein.
          Length = 1655

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 13/55 (23%), Positives = 26/55 (47%)
 Frame = -3

Query: 488 VQRVPNLNDQQDRPAQVEQ*VHGRPNVRQASRLGLRETTPLQEPEQQNVSSKDAH 324
           +Q+ P  + +  RP+  ++ +   P  R + R+     TP+ EP +  V   D +
Sbjct: 478 IQQRPGASSRAPRPSMAQEDLLRSPTRRLSERVPQEHQTPVLEPRRFQVKVTDTY 532


>Z74042-8|CAA98525.1|  299|Caenorhabditis elegans Hypothetical
           protein T11F9.9 protein.
          Length = 299

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = -2

Query: 489 CAACPK-PQ*PTGPASPSGAIGAWATKRAAGQ 397
           C  CP+ P  P GP  PSG  G+     + GQ
Sbjct: 145 CQPCPQGPPGPPGPPGPSGDAGSNGNPGSPGQ 176


>AL117195-28|CAB55014.1|  458|Caenorhabditis elegans Hypothetical
           protein Y57A10A.11 protein.
          Length = 458

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
 Frame = -2

Query: 489 CAACPK-PQ*PTGPASPSGAIG 427
           C  CP+ P  P GPA P G +G
Sbjct: 304 CVPCPQGPLGPAGPAGPQGNLG 325


>AF067607-9|AAF98609.1|  460|Caenorhabditis elegans Collagen protein
           102 protein.
          Length = 460

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -2

Query: 477 PKPQ*PTGPASPSGAIGAWATKRAAGQSTRA 385
           P P+ P GPA P+G  GA     A G +  A
Sbjct: 146 PGPEGPAGPAGPAGNAGADGEAGAEGPAGEA 176


>Z74036-2|CAA98487.1|  266|Caenorhabditis elegans Hypothetical
           protein F55C10.3 protein.
          Length = 266

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
 Frame = -2

Query: 489 CAACPK-PQ*PTGPASPSGAIGAWATKRAAGQ 397
           C  CP+ P  P GP  PSG  G      + GQ
Sbjct: 112 CQPCPQGPPGPPGPPGPSGDAGGNGNPGSPGQ 143


>Z74036-1|CAA98486.1|  299|Caenorhabditis elegans Hypothetical
           protein F55C10.2 protein.
          Length = 299

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
 Frame = -2

Query: 489 CAACPK-PQ*PTGPASPSGAIGAWATKRAAGQ 397
           C  CP+ P  P GP  PSG  G      + GQ
Sbjct: 145 CQPCPQGPPGPPGPPGPSGDAGGNGNPGSPGQ 176


>Z69787-1|CAA93642.1|  300|Caenorhabditis elegans Hypothetical
           protein C44C10.1 protein.
          Length = 300

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = -2

Query: 486 AACPKPQ*PTGPASPSGAIGAWATKRAAGQSTRAT*DHAAAGA 358
           A  P    P GPA P+G+ GA     + G S     D+ AAGA
Sbjct: 225 AGAPGAPGPDGPAGPAGSPGAPGNPGSQG-SQGPVGDNGAAGA 266


>U64609-1|AAB04598.1|  405|Caenorhabditis elegans Sperm-specific
           family, class qprotein 2 protein.
          Length = 405

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 33/135 (24%), Positives = 43/135 (31%), Gaps = 1/135 (0%)
 Frame = -2

Query: 462 PTGPASPSGAIGAWATKRAAGQSTRAT*DHAAAGARTAERFFKRCTPPCSRAFPVK*TAR 283
           P G A  + +IGA       G ST      A +GA T            S    V     
Sbjct: 73  PVGGAPAAVSIGAPPPAGGGGASTMTALGGAPSGASTMTA-VGGAPRGASTMTAVGGVPS 131

Query: 282 SWFTLRVSSGLPSAAKILAGCHGG-NERGPL*LCAPSTGAAATKGVAIWEPHGADKCPAQ 106
              T+    G P+ A  +    G      P+     +   A+T       P GA    A 
Sbjct: 132 GASTMTAVGGAPTGASTMTAVGGAPTGASPMTAFGGAPTGASTMTAVGGAPTGASTMTAV 191

Query: 105 PARPTGAMTLGFANG 61
              PTGA T+    G
Sbjct: 192 GGAPTGASTMTAVGG 206


>U58742-2|AAB36858.1|  239|Caenorhabditis elegans Helix loop helix
           protein 29 protein.
          Length = 239

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 11/40 (27%), Positives = 25/40 (62%)
 Frame = -3

Query: 203 EVLYNYVRQVLEQQQLKVLRYGSPMARISVQPSRLDPPEQ 84
           +++  Y+ Q+ EQ +  + +  SPM ++ ++P++   PEQ
Sbjct: 142 QIILEYICQMPEQSEA-IEKENSPMYQVYLEPTKCISPEQ 180


>U50312-8|AAA92324.1|  294|Caenorhabditis elegans Collagen protein
           145 protein.
          Length = 294

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = -2

Query: 489 CAACPKPQ*PTGPASPSGAIG 427
           C  CP  Q P GPA PSG  G
Sbjct: 144 CVKCP--QGPAGPAGPSGPAG 162


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,052,563
Number of Sequences: 27780
Number of extensions: 293576
Number of successful extensions: 1256
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1214
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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