Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0029
         (630 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U21323-12|AAA62554.2|  354|Caenorhabditis elegans Hypothetical p...    29   2.7  
Z81076-2|CAB03051.3|  333|Caenorhabditis elegans Hypothetical pr...    28   4.8  

>U21323-12|AAA62554.2|  354|Caenorhabditis elegans Hypothetical
           protein C45G9.11 protein.
          Length = 354

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = +1

Query: 97  NIIYTFCL*SFFFNYVFFCEFSIFS 171
           +I Y FC+ SFF N+ FF  FSI+S
Sbjct: 278 HIHYIFCIFSFFINF-FFLIFSIWS 301


>Z81076-2|CAB03051.3|  333|Caenorhabditis elegans Hypothetical
           protein F35C5.2 protein.
          Length = 333

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +2

Query: 371 NKILISNALRFK*INL-LYYTYCMKYIIRK*NKIISHVTRHK 493
           N I+   A+ +  + L L   +C++Y+ R+  + I H+T HK
Sbjct: 277 NLIIWVYAISYATVTLPLLIIFCIRYVRRRRQRTIHHITSHK 318


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,506,067
Number of Sequences: 27780
Number of extensions: 206203
Number of successful extensions: 306
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 306
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)