Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0006
(753 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical pr... 31 0.88
Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical p... 31 0.88
U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical p... 31 0.88
Z81114-2|CAB03286.1| 604|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z49909-5|CAD59140.1| 594|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z49909-4|CAA90108.1| 876|Caenorhabditis elegans Hypothetical pr... 30 2.0
AY303577-1|AAP57299.1| 876|Caenorhabditis elegans cell death-re... 30 2.0
Z83221-9|CAB05710.1| 400|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z82095-8|CAB05029.1| 400|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z73899-9|CAA98072.2| 905|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z11576-1|CAA77663.1| 625|Caenorhabditis elegans aromatic-L-amin... 29 3.5
U88173-4|AAK21386.1| 126|Caenorhabditis elegans Vacuolar h atpa... 29 3.5
U64833-4|AAB04817.1| 380|Caenorhabditis elegans Hypothetical pr... 29 3.5
AL132846-3|CAB60346.2| 1648|Caenorhabditis elegans Hypothetical ... 29 3.5
Z99709-2|CAB16859.1| 307|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z11115-14|CAC42391.1| 644|Caenorhabditis elegans Hypothetical p... 29 4.7
Z11115-13|CAA77454.2| 642|Caenorhabditis elegans Hypothetical p... 29 4.7
L16559-8|AAA27929.2| 643|Caenorhabditis elegans Hypothetical pr... 29 4.7
AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical ... 29 4.7
AF269694-1|AAF76193.1| 642|Caenorhabditis elegans LIN-9S protein. 29 4.7
AF269693-1|AAF76192.1| 644|Caenorhabditis elegans LIN-9L protein. 29 4.7
AF063007-1|AAC16430.2| 730|Caenorhabditis elegans Hypothetical ... 28 6.2
AC006618-5|ABB88234.1| 513|Caenorhabditis elegans Gaba/glycine ... 28 6.2
Z99279-2|CAD89758.1| 500|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z99279-1|CAB16496.4| 598|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z81035-2|CAB02736.1| 379|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z69664-10|CAC42313.1| 1311|Caenorhabditis elegans Hypothetical p... 28 8.2
Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z68880-11|CAC42342.1| 1311|Caenorhabditis elegans Hypothetical p... 28 8.2
Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical p... 28 8.2
M77697-3|AAA27898.3| 616|Caenorhabditis elegans Hypothetical pr... 28 8.2
AL023834-2|CAA19479.2| 217|Caenorhabditis elegans Hypothetical ... 28 8.2
AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C... 28 8.2
AF308448-1|AAL09434.1| 1311|Caenorhabditis elegans PXF isoform B... 28 8.2
AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A... 28 8.2
AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein. 28 8.2
AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical ... 28 8.2
AF003130-3|AAB54123.1| 849|Caenorhabditis elegans Hypothetical ... 28 8.2
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 28 8.2
AC006770-3|AAF60595.1| 508|Caenorhabditis elegans Hypothetical ... 28 8.2
AC006618-4|ABB88233.1| 546|Caenorhabditis elegans Gaba/glycine ... 28 8.2
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
W06A7.3f protein.
Length = 2488
Score = 31.5 bits (68), Expect = 0.66
Identities = 23/83 (27%), Positives = 42/83 (50%)
Frame = +2
Query: 365 DEGIPVDEVVKIKVETPKEIKQEDIEAEENYHYSDDSDDVYLTNLKAKKNDIDVIRLKNR 544
DE +PVDE+V I+ E P+E+ + E+ + D V LT + I VI + +
Sbjct: 824 DEPLPVDELVSIE-ERPEEVAPAESTGEDEDIFRRDRRTVSLTGTGDQNAPIQVIFVGDG 882
Query: 545 EKHEVKSNGMKKNSCGNKSELME 613
+++ + ++ S +EL+E
Sbjct: 883 DENPDANADQERTS--EHNELIE 903
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
W06A7.3c protein.
Length = 2484
Score = 31.5 bits (68), Expect = 0.66
Identities = 23/83 (27%), Positives = 42/83 (50%)
Frame = +2
Query: 365 DEGIPVDEVVKIKVETPKEIKQEDIEAEENYHYSDDSDDVYLTNLKAKKNDIDVIRLKNR 544
DE +PVDE+V I+ E P+E+ + E+ + D V LT + I VI + +
Sbjct: 824 DEPLPVDELVSIE-ERPEEVAPAESTGEDEDIFRRDRRTVSLTGTGDQNAPIQVIFVGDG 882
Query: 545 EKHEVKSNGMKKNSCGNKSELME 613
+++ + ++ S +EL+E
Sbjct: 883 DENPDANADQERTS--EHNELIE 903
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
W06A7.3a protein.
Length = 2607
Score = 31.5 bits (68), Expect = 0.66
Identities = 23/83 (27%), Positives = 42/83 (50%)
Frame = +2
Query: 365 DEGIPVDEVVKIKVETPKEIKQEDIEAEENYHYSDDSDDVYLTNLKAKKNDIDVIRLKNR 544
DE +PVDE+V I+ E P+E+ + E+ + D V LT + I VI + +
Sbjct: 824 DEPLPVDELVSIE-ERPEEVAPAESTGEDEDIFRRDRRTVSLTGTGDQNAPIQVIFVGDG 882
Query: 545 EKHEVKSNGMKKNSCGNKSELME 613
+++ + ++ S +EL+E
Sbjct: 883 DENPDANADQERTS--EHNELIE 903
>Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical protein
F54D5.14 protein.
Length = 1130
Score = 31.1 bits (67), Expect = 0.88
Identities = 24/82 (29%), Positives = 41/82 (50%)
Frame = +2
Query: 434 DIEAEENYHYSDDSDDVYLTNLKAKKNDIDVIRLKNREKHEVKSNGMKKNSCGNKSELME 613
++E + + Y DDSDD T + KK+ + ++K V+ +K S G +S +
Sbjct: 1004 EVEEVDEHSYDDDSDD--STGPRRKKS-----KKSGQKKKRVRD--LKGLSGGERSFVTA 1054
Query: 614 DWSMILKQFPEGPYNLVDETDV 679
M L + E P+ ++DE DV
Sbjct: 1055 ALVMSLWEVMEQPFRMMDEFDV 1076
>Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical
protein F54D5.14 protein.
Length = 1130
Score = 31.1 bits (67), Expect = 0.88
Identities = 24/82 (29%), Positives = 41/82 (50%)
Frame = +2
Query: 434 DIEAEENYHYSDDSDDVYLTNLKAKKNDIDVIRLKNREKHEVKSNGMKKNSCGNKSELME 613
++E + + Y DDSDD T + KK+ + ++K V+ +K S G +S +
Sbjct: 1004 EVEEVDEHSYDDDSDD--STGPRRKKS-----KKSGQKKKRVRD--LKGLSGGERSFVTA 1054
Query: 614 DWSMILKQFPEGPYNLVDETDV 679
M L + E P+ ++DE DV
Sbjct: 1055 ALVMSLWEVMEQPFRMMDEFDV 1076
>U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical
protein C52B9.8 protein.
Length = 1336
Score = 31.1 bits (67), Expect = 0.88
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +2
Query: 350 QSLRID-EGIPVDEVVKIKVETPKEIKQEDIEAEENYHYSDDSDDVYLTNLKAKKNDIDV 526
+ +RI G P ++ KI E PK+ ++ EE H SDD + K K D D
Sbjct: 1092 EKIRIKFSGEPSEKYRKINEEPPKKEHRDKGRKEEKSH-KHRSDDDDSSPKKKKHRDSDE 1150
Query: 527 IRLKNREKHEVKSNGMKK 580
K ++KH+ S+ K
Sbjct: 1151 SSEKKKKKHKHDSDSALK 1168
>Z81114-2|CAB03286.1| 604|Caenorhabditis elegans Hypothetical
protein T04D3.2 protein.
Length = 604
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/92 (27%), Positives = 42/92 (45%)
Frame = +2
Query: 224 NETIVVENKLQAFLKQQGTHNTTVDLILGKPKTPILPPKTCEQSLRIDEGIPVDEVVKIK 403
NE IV+E L+ +++Q +H I P++ Q I++GI V
Sbjct: 202 NENIVIERDLRGGIRKQSSHLGPFQAI-----PPVVVRTLMMQE--IEKGIDVTG----N 250
Query: 404 VETPKEIKQEDIEAEENYHYSDDSDDVYLTNL 499
E P + D ++EE+ DD DD+ + +L
Sbjct: 251 PENPDSAVESDYDSEEDDEDEDDEDDLDVDDL 282
>Z49909-5|CAD59140.1| 594|Caenorhabditis elegans Hypothetical
protein C14A4.4b protein.
Length = 594
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +2
Query: 413 PKEIKQEDIEAEENYHYSDDSDDVYLTNLKAKKNDIDVIRLKNREKHEVKSN-GMKKNS 586
PK+ K +D E++ Y + ++ D D K R K++ K N MKK+S
Sbjct: 526 PKKKKSDDDAPVEDFDYEKADSSAFEKPVRDNNADFDPFHQKYRLKNKTKKNMAMKKSS 584
>Z49909-4|CAA90108.1| 876|Caenorhabditis elegans Hypothetical
protein C14A4.4a protein.
Length = 876
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +2
Query: 413 PKEIKQEDIEAEENYHYSDDSDDVYLTNLKAKKNDIDVIRLKNREKHEVKSN-GMKKNS 586
PK+ K +D E++ Y + ++ D D K R K++ K N MKK+S
Sbjct: 808 PKKKKSDDDAPVEDFDYEKADSSAFEKPVRDNNADFDPFHQKYRLKNKTKKNMAMKKSS 866
>AY303577-1|AAP57299.1| 876|Caenorhabditis elegans cell
death-related nuclease 3 protein.
Length = 876
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +2
Query: 413 PKEIKQEDIEAEENYHYSDDSDDVYLTNLKAKKNDIDVIRLKNREKHEVKSN-GMKKNS 586
PK+ K +D E++ Y + ++ D D K R K++ K N MKK+S
Sbjct: 808 PKKKKSDDDAPVEDFDYEKADSSAFEKPVRDNNADFDPFHQKYRLKNKTKKNMAMKKSS 866
>Z83221-9|CAB05710.1| 400|Caenorhabditis elegans Hypothetical
protein C49A1.2 protein.
Length = 400
Score = 29.1 bits (62), Expect = 3.5
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Frame = +2
Query: 71 DKFVNNYIFDEKNAWYLKMALLP---VKIDKNDRLPQKICDHC---SRKVNEFYEFCNET 232
D F NY+ D KN +Y+ M ++ +++ +ND +P KI + C RK E N
Sbjct: 309 DDFELNYVID-KN-FYIGMTIVDSKDIELTENDEIPDKIGEDCLPFYRKDCEEDAIKNRA 366
Query: 233 IVVENKLQAFLKQQGTHNTTVDLILG 310
+VV++ + + H+ T ++ G
Sbjct: 367 LVVDDNWRDY---NENHSDTSSILEG 389
>Z82095-8|CAB05029.1| 400|Caenorhabditis elegans Hypothetical
protein C49A1.2 protein.
Length = 400
Score = 29.1 bits (62), Expect = 3.5
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Frame = +2
Query: 71 DKFVNNYIFDEKNAWYLKMALLP---VKIDKNDRLPQKICDHC---SRKVNEFYEFCNET 232
D F NY+ D KN +Y+ M ++ +++ +ND +P KI + C RK E N
Sbjct: 309 DDFELNYVID-KN-FYIGMTIVDSKDIELTENDEIPDKIGEDCLPFYRKDCEEDAIKNRA 366
Query: 233 IVVENKLQAFLKQQGTHNTTVDLILG 310
+VV++ + + H+ T ++ G
Sbjct: 367 LVVDDNWRDY---NENHSDTSSILEG 389
>Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical
protein F36F2.3b protein.
Length = 363
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Frame = +2
Query: 398 IKVETPK-EIKQEDIEAEENYHYSDD----SDDVYLTNLKAKKNDIDVIRLKNREKHEVK 562
+K++ PK ++K+ED + ++ Y D DD K K++D D + K REK K
Sbjct: 173 MKLQAPKTKVKREDKKRDDRKDYERDRERRKDDYEKEKSKRKESDRDNEKEKQREKEVEK 232
Query: 563 SN 568
+
Sbjct: 233 EH 234
>Z73899-9|CAA98072.2| 905|Caenorhabditis elegans Hypothetical
protein ZK829.2 protein.
Length = 905
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/75 (25%), Positives = 31/75 (41%)
Frame = +2
Query: 401 KVETPKEIKQEDIEAEENYHYSDDSDDVYLTNLKAKKNDIDVIRLKNREKHEVKSNGMKK 580
K P E K+E + E +H AKK ++ + K EV NGM +
Sbjct: 286 KDSRPSETKKETLMMPEIHHTKHFDSIGGEEQAFAKKEKVEEFKPTEAVKEEVDVNGMSR 345
Query: 581 NSCGNKSELMEDWSM 625
+ N ++ + D+ M
Sbjct: 346 DQFRNAAKKVVDYLM 360
>Z11576-1|CAA77663.1| 625|Caenorhabditis elegans aromatic-L-amino
acid decarboxylaseprotein.
Length = 625
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/75 (25%), Positives = 31/75 (41%)
Frame = +2
Query: 401 KVETPKEIKQEDIEAEENYHYSDDSDDVYLTNLKAKKNDIDVIRLKNREKHEVKSNGMKK 580
K P E K+E + E +H AKK ++ + K EV NGM +
Sbjct: 6 KDSRPSETKKETLMMPEIHHTKHFDSIGGEEQAFAKKEKVEEFKPTEAVKEEVDVNGMSR 65
Query: 581 NSCGNKSELMEDWSM 625
+ N ++ + D+ M
Sbjct: 66 DQFRNAAKKVVDYLM 80
>U88173-4|AAK21386.1| 126|Caenorhabditis elegans Vacuolar h atpase
protein 10 protein.
Length = 126
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +2
Query: 380 VDEVVKIKVETPKEIKQEDIEAEENYHYSDDSD-DVYLTNLKAKKNDIDVIRLKNREKHE 556
++E K K++ K+ KQE E Y +++ + K DI+ K R E
Sbjct: 22 INEARKRKLQRTKQAKQEAQAEVEKYKQQREAEFKAFEQQYLGTKEDIES---KIRRDTE 78
Query: 557 VKSNGMKKNSCGNKSELM 610
+ +GMK++ GNK ++
Sbjct: 79 DQISGMKQSVAGNKQAVI 96
>U64833-4|AAB04817.1| 380|Caenorhabditis elegans Hypothetical
protein B0507.7 protein.
Length = 380
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +2
Query: 401 KVETPKEIKQEDIEAEENYHYSDDSDDVYLTNLKAKKNDIDVIRLKNRE 547
K++ KEI +E +E + N ++ ++ L+ ++ND +LKN E
Sbjct: 19 KLKQQKEINEEYLELKRNLDKTEIEGELQFQMLEKQQNDSQKEKLKNTE 67
>AL132846-3|CAB60346.2| 1648|Caenorhabditis elegans Hypothetical
protein Y43D4A.5 protein.
Length = 1648
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/99 (22%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Frame = +2
Query: 290 TVDLILGKPKTPILPPKTCEQSLRIDEGIPVDEVVKIKVETPKEIKQEDIEAEENYHYSD 469
T +++ +P TP P ++ E I++ E + +E ++E++EA E+ D
Sbjct: 458 TAPIVVARPTTPEPPFRSDEVQNEIEDAKEKVEEDTEEETGREEDEEEEVEASEDDADGD 517
Query: 470 DSD--DVYLTNLKAKKNDIDVIRLKNREKHEVKSNGMKK 580
D D ++ T + +N+ D + ++ +S G+ K
Sbjct: 518 DDDVEEITATTPRGIENNEDYVEETFSKEEIPQSFGIDK 556
>Z99709-2|CAB16859.1| 307|Caenorhabditis elegans Hypothetical
protein C47B2.2a protein.
Length = 307
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = +2
Query: 101 EKNAWYLKMALLPVKIDKNDRLPQKICDHCSRKVNEFYEFCNETIVVENKLQAFLKQQGT 280
EK ++ + P ++ L + C K+N+F FC + +++ NKL LK++ +
Sbjct: 32 EKGTNFVLLKKTPQILELQTILKDRFCG----KINDFRYFCRKNLLILNKLLFCLKKRFS 87
Query: 281 HN 286
N
Sbjct: 88 WN 89
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical protein
F36F2.3a protein.
Length = 1128
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Frame = +2
Query: 401 KVETPK-EIKQEDIEAEENYHYSDD----SDDVYLTNLKAKKNDIDVIRLKNREKHEVKS 565
K++ PK ++K+ED + ++ Y D DD K K++D D + K REK K
Sbjct: 939 KLQAPKTKVKREDKKRDDRKDYERDRERRKDDYEKEKSKRKESDRDNEKEKQREKEVEKE 998
Query: 566 N 568
+
Sbjct: 999 H 999
>Z11115-14|CAC42391.1| 644|Caenorhabditis elegans Hypothetical
protein ZK637.7b protein.
Length = 644
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 146 IDKNDRLPQKICDHCSRKVNEFYEFCNETIVVEN 247
I ++ P+ + CS++ F E CN+ + VEN
Sbjct: 530 ISTSNMKPEAVRQMCSQQAGRFVEHCNQGLNVEN 563
>Z11115-13|CAA77454.2| 642|Caenorhabditis elegans Hypothetical
protein ZK637.7a protein.
Length = 642
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 146 IDKNDRLPQKICDHCSRKVNEFYEFCNETIVVEN 247
I ++ P+ + CS++ F E CN+ + VEN
Sbjct: 528 ISTSNMKPEAVRQMCSQQAGRFVEHCNQGLNVEN 561
>L16559-8|AAA27929.2| 643|Caenorhabditis elegans Hypothetical
protein C06E1.9 protein.
Length = 643
Score = 28.7 bits (61), Expect = 4.7
Identities = 21/64 (32%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Frame = +2
Query: 371 GIPVDEVVKIKVETPKEIKQEDIEAEENY----HYSDDSDDVYLTNLKAKKN-DIDVIRL 535
G P+DE+V+ ++ + +EI AE + H+S DS +V L +L +++N ++++RL
Sbjct: 328 GAPLDELVRAQIASIREILPH-FSAEFVHLALRHFSYDS-EVTLASLLSRENLPLELLRL 385
Query: 536 KNRE 547
+N E
Sbjct: 386 ENVE 389
>AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical
protein Y26D4A.14 protein.
Length = 952
Score = 28.7 bits (61), Expect = 4.7
Identities = 31/123 (25%), Positives = 47/123 (38%), Gaps = 2/123 (1%)
Frame = +2
Query: 293 VDLILGKPKTPILPPKTCEQSLRIDEGIPVDEVVKIKVETPK--EIKQEDIEAEENYHYS 466
V+ GK I P K E + + + I D K IK+ +IE
Sbjct: 644 VEGFFGKCYVIITPKK--EDKIELVDNIKTDNTTSNTESNIKTSSIKESNIETSSLKVSK 701
Query: 467 DDSDDVYLTNLKAKKNDIDVIRLKNREKHEVKSNGMKKNSCGNKSELMEDWSMILKQFPE 646
N K+KK+D I N +V +G K+ CG + LM +++L +F
Sbjct: 702 KIEGSGNKMNKKSKKSDDKKISKANNNFLKVLKSGSGKSGCGKTNLLM---NLLLDKFQG 758
Query: 647 GPY 655
Y
Sbjct: 759 DDY 761
>AF269694-1|AAF76193.1| 642|Caenorhabditis elegans LIN-9S protein.
Length = 642
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 146 IDKNDRLPQKICDHCSRKVNEFYEFCNETIVVEN 247
I ++ P+ + CS++ F E CN+ + VEN
Sbjct: 528 ISTSNMKPEAVRQMCSQQAGRFVEHCNQGLNVEN 561
>AF269693-1|AAF76192.1| 644|Caenorhabditis elegans LIN-9L protein.
Length = 644
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 146 IDKNDRLPQKICDHCSRKVNEFYEFCNETIVVEN 247
I ++ P+ + CS++ F E CN+ + VEN
Sbjct: 530 ISTSNMKPEAVRQMCSQQAGRFVEHCNQGLNVEN 563
>AF063007-1|AAC16430.2| 730|Caenorhabditis elegans Hypothetical
protein R119.1 protein.
Length = 730
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 548 KHEVKSNGMKKNSCGNKSELMEDWSMILKQFPEGPYNLV 664
+H +K+ G K + EL DW+ I + F NLV
Sbjct: 517 EHNLKTTGFKSGAGAETDELRSDWNDIYQNFNRFLDNLV 555
>AC006618-5|ABB88234.1| 513|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 2, isoform b protein.
Length = 513
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Frame = +2
Query: 407 ETPKEIKQEDIEAEENYHYSDDSDDVYLTNLKAKKNDIDVIRLKNREKHEV--KSNGMKK 580
E +E+ E E + + + L + K+ND + N H + MK
Sbjct: 424 EAQEEVWAEQKETNLSEVWKESDPAERLAHWNEKENDASSPLMGNGRAHVRYGAAEKMKN 483
Query: 581 NSCGNKSELMEDWSMILKQFPEGPYNL 661
C + S E WS +KQ + + L
Sbjct: 484 RKCNDSSRKKEKWSSAIKQIQKHKFVL 510
>Z99279-2|CAD89758.1| 500|Caenorhabditis elegans Hypothetical
protein Y57G11A.1b protein.
Length = 500
Score = 27.9 bits (59), Expect = 8.2
Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 1/139 (0%)
Frame = +2
Query: 338 KTCEQSLRIDEGIPVDEVVKIKVETPKEIKQEDIEAEENYHYSDDSDDVYLTNLKAKKND 517
++ ++ I G E V++ E +IK + E N ++ + L+A K
Sbjct: 73 ESADRDPNIIRGSKKAEKVELNFENVGDIKNK--WKEGNVETAEAKEAAERKELEALKGG 130
Query: 518 IDVIRLKNREKHEVKSNGMKKNSCGNKSELMEDWSM-ILKQFPEGPYNLVDETDVPVKQE 694
+ V K+R K ++ NK EL + K F G + D + PV++
Sbjct: 131 VSV---KDRFKERGDNDEQVVERSWNKDELSTSAAAEARKSFMAG--SAYDAAN-PVEKT 184
Query: 695 VKDENSADFDDLPNLKDKY 751
VKD + F L KDK+
Sbjct: 185 VKDLDDLKFGQLKGFKDKF 203
>Z99279-1|CAB16496.4| 598|Caenorhabditis elegans Hypothetical
protein Y57G11A.1a protein.
Length = 598
Score = 27.9 bits (59), Expect = 8.2
Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 1/139 (0%)
Frame = +2
Query: 338 KTCEQSLRIDEGIPVDEVVKIKVETPKEIKQEDIEAEENYHYSDDSDDVYLTNLKAKKND 517
++ ++ I G E V++ E +IK + E N ++ + L+A K
Sbjct: 73 ESADRDPNIIRGSKKAEKVELNFENVGDIKNK--WKEGNVETAEAKEAAERKELEALKGG 130
Query: 518 IDVIRLKNREKHEVKSNGMKKNSCGNKSELMEDWSM-ILKQFPEGPYNLVDETDVPVKQE 694
+ V K+R K ++ NK EL + K F G + D + PV++
Sbjct: 131 VSV---KDRFKERGDNDEQVVERSWNKDELSTSAAAEARKSFMAG--SAYDAAN-PVEKT 184
Query: 695 VKDENSADFDDLPNLKDKY 751
VKD + F L KDK+
Sbjct: 185 VKDLDDLKFGQLKGFKDKF 203
>Z81035-2|CAB02736.1| 379|Caenorhabditis elegans Hypothetical
protein C15H11.2 protein.
Length = 379
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +3
Query: 39 LWILFAVCVVPINSSTIIYLTKR 107
L+ +FA+ +P+N ST+IY+ KR
Sbjct: 37 LYGIFALIGLPVNISTLIYMLKR 59
>Z69664-10|CAC42313.1| 1311|Caenorhabditis elegans Hypothetical
protein T14G10.2b protein.
Length = 1311
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 551 HEVKSNGMKKNSCGNKSELMEDWSMILKQFPEGPYNLVDETDV 679
H+ G K ++ +KS +ME ILK E + DE +
Sbjct: 711 HKTSITGKKSSTTSSKSGMMEKLMTILKSSKEDSMDFTDEAKI 753
>Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical
protein T14G10.2a protein.
Length = 1470
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 551 HEVKSNGMKKNSCGNKSELMEDWSMILKQFPEGPYNLVDETDV 679
H+ G K ++ +KS +ME ILK E + DE +
Sbjct: 711 HKTSITGKKSSTTSSKSGMMEKLMTILKSSKEDSMDFTDEAKI 753
>Z68880-11|CAC42342.1| 1311|Caenorhabditis elegans Hypothetical
protein T14G10.2b protein.
Length = 1311
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 551 HEVKSNGMKKNSCGNKSELMEDWSMILKQFPEGPYNLVDETDV 679
H+ G K ++ +KS +ME ILK E + DE +
Sbjct: 711 HKTSITGKKSSTTSSKSGMMEKLMTILKSSKEDSMDFTDEAKI 753
>Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical
protein T14G10.2a protein.
Length = 1470
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 551 HEVKSNGMKKNSCGNKSELMEDWSMILKQFPEGPYNLVDETDV 679
H+ G K ++ +KS +ME ILK E + DE +
Sbjct: 711 HKTSITGKKSSTTSSKSGMMEKLMTILKSSKEDSMDFTDEAKI 753
>M77697-3|AAA27898.3| 616|Caenorhabditis elegans Hypothetical
protein B0303.4 protein.
Length = 616
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 347 EQSLRIDEGIPVDEVVKIKVETPKEIKQEDIEAE 448
E + ID G P++E+ +++VE ++ +D E E
Sbjct: 284 ETEIEIDRGGPIEEIEQVEVEQNEDPPLDDQEVE 317
>AL023834-2|CAA19479.2| 217|Caenorhabditis elegans Hypothetical
protein Y32B12A.3 protein.
Length = 217
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +2
Query: 218 FCNETIVVENKLQAFLKQQGTHNTTVDLILGKPK 319
+C+E +E++LQA L++ + + +ILG P+
Sbjct: 7 YCSEHTTIESELQAELRRATIDSVPMAMILGAPE 40
>AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C
protein.
Length = 1347
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 551 HEVKSNGMKKNSCGNKSELMEDWSMILKQFPEGPYNLVDETDV 679
H+ G K ++ +KS +ME ILK E + DE +
Sbjct: 588 HKTSITGKKSSTTSSKSGMMEKLMTILKSSKEDSMDFTDEAKI 630
>AF308448-1|AAL09434.1| 1311|Caenorhabditis elegans PXF isoform B
protein.
Length = 1311
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 551 HEVKSNGMKKNSCGNKSELMEDWSMILKQFPEGPYNLVDETDV 679
H+ G K ++ +KS +ME ILK E + DE +
Sbjct: 711 HKTSITGKKSSTTSSKSGMMEKLMTILKSSKEDSMDFTDEAKI 753
>AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A
protein.
Length = 1470
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 551 HEVKSNGMKKNSCGNKSELMEDWSMILKQFPEGPYNLVDETDV 679
H+ G K ++ +KS +ME ILK E + DE +
Sbjct: 711 HKTSITGKKSSTTSSKSGMMEKLMTILKSSKEDSMDFTDEAKI 753
>AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein.
Length = 1470
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 551 HEVKSNGMKKNSCGNKSELMEDWSMILKQFPEGPYNLVDETDV 679
H+ G K ++ +KS +ME ILK E + DE +
Sbjct: 711 HKTSITGKKSSTTSSKSGMMEKLMTILKSSKEDSMDFTDEAKI 753
>AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical
protein C35E7.9 protein.
Length = 301
Score = 27.9 bits (59), Expect = 8.2
Identities = 28/106 (26%), Positives = 47/106 (44%)
Frame = +2
Query: 401 KVETPKEIKQEDIEAEENYHYSDDSDDVYLTNLKAKKNDIDVIRLKNREKHEVKSNGMKK 580
K E KE K+ED + + + D+ DD + A+K + K EK E K KK
Sbjct: 118 KKEEKKEEKKEDEKEKGDDKKEDEKDDKKSGSKDAEKKEEKKEEEKKEEKKEEKKE-EKK 176
Query: 581 NSCGNKSELMEDWSMILKQFPEGPYNLVDETDVPVKQEVKDENSAD 718
+ E E+ + P G +L+ + D ++++K N+ D
Sbjct: 177 EDEKKEDEKKEEPKPHITIDPPG--DLMFKADQQEQKKLKLTNTHD 220
>AF003130-3|AAB54123.1| 849|Caenorhabditis elegans Hypothetical
protein F55A12.5 protein.
Length = 849
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Frame = +2
Query: 377 PVDEVVKIKVETP---KEIKQEDIEAEENYH-YSDDSDD 481
P +V K KVE P E ++E+ E E+ Y Y DD D+
Sbjct: 655 PKMDVQKKKVEIPVISSESEEEEYEEEDEYEEYEDDEDE 693
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +2
Query: 314 PKTPILPPKTCEQSLRIDEGIPVDEVVKIKVETPKEIKQEDIEAEENYHYSDDSDD 481
P+ P ++ E+S +E V+E K K +TP++ ++ EE+ SDD ++
Sbjct: 592 PRKPAAKVES-EESFGNEEEEEVEESPKKKGKTPRKSSKKSAAKEESEESSDDEEE 646
>AC006770-3|AAF60595.1| 508|Caenorhabditis elegans Hypothetical
protein Y46B2A.1 protein.
Length = 508
Score = 27.9 bits (59), Expect = 8.2
Identities = 26/94 (27%), Positives = 46/94 (48%)
Frame = +2
Query: 446 EENYHYSDDSDDVYLTNLKAKKNDIDVIRLKNREKHEVKSNGMKKNSCGNKSELMEDWSM 625
+++ +YS ++V L A D+D LK+ +EV S G K K MED +M
Sbjct: 71 KDHVYYSPYINNVNLDGGAAY--DMDQYGLKDPRCNEVLSPGDLKVESKEKINNMEDMTM 128
Query: 626 ILKQFPEGPYNLVDETDVPVKQEVKDENSADFDD 727
+ QF + + + + V+Q E+S++ D+
Sbjct: 129 EMLQFAMRDF-IRPQGRMQVQQREDPESSSEDDE 161
>AC006618-4|ABB88233.1| 546|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 2, isoform a protein.
Length = 546
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/79 (24%), Positives = 30/79 (37%), Gaps = 2/79 (2%)
Frame = +2
Query: 407 ETPKEIKQEDIEAEENYHYSDDSDDVYLTNLKAKKNDIDVIRLKNREKHEV--KSNGMKK 580
E +E+ E E + + + L + K+ND + N H + MK
Sbjct: 424 EAQEEVWAEQKETNLSEVWKESDPAERLAHWNEKENDASSPLMGNGRAHVRYGAAEKMKN 483
Query: 581 NSCGNKSELMEDWSMILKQ 637
C + S E WS +KQ
Sbjct: 484 RKCNDSSRKKEKWSSAIKQ 502
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,176,191
Number of Sequences: 27780
Number of extensions: 317145
Number of successful extensions: 1512
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1507
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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