Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120067.Seq
(790 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49909-15|CAF31470.1| 697|Caenorhabditis elegans Hypothetical p... 39 0.005
Z49909-14|CAA90116.2| 717|Caenorhabditis elegans Hypothetical p... 39 0.005
Z83127-3|CAB05629.2| 291|Caenorhabditis elegans Hypothetical pr... 32 0.41
U97002-11|AAY86259.1| 121|Caenorhabditis elegans Hypothetical p... 32 0.54
U56963-1|AAB38120.1| 161|Caenorhabditis elegans Hypothetical pr... 31 0.94
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 31 1.2
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 31 1.2
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 31 1.2
U41026-2|AAM51523.1| 295|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical pr... 30 1.6
AC024831-7|AAY86310.1| 711|Caenorhabditis elegans Hypothetical ... 30 2.2
U97009-2|AAC69029.3| 342|Caenorhabditis elegans Serpentine rece... 29 2.9
U58750-3|AAB00643.2| 350|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF016677-5|AAB66143.1| 128|Caenorhabditis elegans Hypothetical ... 29 3.8
Z48638-8|CAA88568.1| 237|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z81491-17|CAO82030.1| 959|Caenorhabditis elegans Hypothetical p... 28 6.6
Z81131-2|CAB03425.1| 349|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z81092-2|CAB03145.3| 959|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z81131-4|CAD01083.1| 415|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z50070-4|CAA90394.2| 172|Caenorhabditis elegans Hypothetical pr... 28 8.8
>Z49909-15|CAF31470.1| 697|Caenorhabditis elegans Hypothetical
protein C14A4.12b protein.
Length = 697
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = -3
Query: 611 LSTNKFITLTVLLIVSSFSINNRQFDINSFTYICKNLYF*NNTQKSF 471
LS FIT+ + L++ FSIN I SF Y+ KN YF + T F
Sbjct: 417 LSKFNFITIAISLVLGIFSINATYLHIFSFIYLQKNGYFIDGTSAEF 463
>Z49909-14|CAA90116.2| 717|Caenorhabditis elegans Hypothetical
protein C14A4.12a protein.
Length = 717
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = -3
Query: 611 LSTNKFITLTVLLIVSSFSINNRQFDINSFTYICKNLYF*NNTQKSF 471
LS FIT+ + L++ FSIN I SF Y+ KN YF + T F
Sbjct: 437 LSKFNFITIAISLVLGIFSINATYLHIFSFIYLQKNGYFIDGTSAEF 483
>Z83127-3|CAB05629.2| 291|Caenorhabditis elegans Hypothetical
protein T23F6.3 protein.
Length = 291
Score = 32.3 bits (70), Expect = 0.41
Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Frame = +1
Query: 625 ECNVCKEISTDERFLKPKEC--CEYAICNACCVTMWKTATTHAKCPACGHR 771
EC VC E D P+ C C I CV W ++T CP C R
Sbjct: 209 ECTVCFETPVD-----PQGCNRCMNVIGCKTCVQRWHRSSTQPSCPLCRRR 254
>U97002-11|AAY86259.1| 121|Caenorhabditis elegans Hypothetical
protein K09H11.11 protein.
Length = 121
Score = 31.9 bits (69), Expect = 0.54
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -2
Query: 465 SFNASRNCFKYG*NTITLPRSRTPYAP 385
+FN R CFKY +I+ PRSR P+ P
Sbjct: 70 AFNRLRKCFKY--RSISPPRSRAPFPP 94
>U56963-1|AAB38120.1| 161|Caenorhabditis elegans Hypothetical
protein T13A10.2 protein.
Length = 161
Score = 31.1 bits (67), Expect = 0.94
Identities = 15/46 (32%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = +1
Query: 628 CNVCKEISTDERFLKPKEC-CEYAICNACCVTMWKTATTHAKCPAC 762
C VC + KPK C C + C AC + KCP C
Sbjct: 97 CAVCHDSYASRGPKKPKVCSCLHTYCGACIREISSRHNGEMKCPEC 142
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 192 SAAFAIIDDKHLEMYKYRIENNFFITMINVPTLPNPTVFPMTTVRAVT 335
S AF + L Y Y N ++ PT P PT +P+TTV ++
Sbjct: 432 SYAFFVYGKNKLYSYGYEGGANKPTVVLAPPTTPGPTFYPVTTVSTMS 479
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 192 SAAFAIIDDKHLEMYKYRIENNFFITMINVPTLPNPTVFPMTTVRAVT 335
S AF + L Y Y N ++ PT P PT +P+TTV ++
Sbjct: 432 SYAFFVYGKNKLYSYGYEGGANKPTVVLAPPTTPGPTFYPVTTVSTMS 479
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 192 SAAFAIIDDKHLEMYKYRIENNFFITMINVPTLPNPTVFPMTTVRAVT 335
S AF + L Y Y N ++ PT P PT +P+TTV ++
Sbjct: 432 SYAFFVYGKNKLYSYGYEGGANKPTVVLAPPTTPGPTFYPVTTVSTMS 479
>U41026-2|AAM51523.1| 295|Caenorhabditis elegans Hypothetical
protein C28G1.6 protein.
Length = 295
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/49 (26%), Positives = 21/49 (42%)
Frame = +1
Query: 616 VLYECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPAC 762
+L C +C+E E + C + IC C +++ KCP C
Sbjct: 2 ILPTCEICEESYRSESRIPKNLNCGHVICPVCASKLFE--NPEVKCPTC 48
>Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical
protein C16C10.7 protein.
Length = 235
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/57 (26%), Positives = 22/57 (38%)
Frame = +1
Query: 607 DNSVLYECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACGHRIN 777
D S +ECN+C + + D C + C C T + CP C I+
Sbjct: 19 DESARFECNICLDAAKD----AVVSLCGHLFCWPCLSQWLDTRPNNQVCPVCKSAID 71
>AC024831-7|AAY86310.1| 711|Caenorhabditis elegans Hypothetical
protein Y55F3C.9 protein.
Length = 711
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = -3
Query: 302 GRVWQCRHIDHSNKKIILYSILVHFQMFIVNYCKR 198
G +W + HS+K ++++S+ + F +FIV +C +
Sbjct: 102 GSLWIFYPLIHSDKMLLIHSVCLGFIIFIVVHCTK 136
>U97009-2|AAC69029.3| 342|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 33 protein.
Length = 342
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -3
Query: 611 LSTNKFITLTVLLIVSSFSINNRQFDINSFTYICKNLYF 495
LS N FI+L + +I FSI ++F N+ +C YF
Sbjct: 118 LSLNSFISLMLSMIYRYFSIRFKRFTANTSIILCIIGYF 156
>U58750-3|AAB00643.2| 350|Caenorhabditis elegans Hypothetical
protein F55G1.6 protein.
Length = 350
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +1
Query: 616 VLYECNVCKEISTDE----RFLKPKECCEYAICNACCVTMWKTATTHAKCPACG 765
V C++C E +E ++KP +C + +A C K+ AKC +CG
Sbjct: 35 VAIHCHICYESINNEINNADYIKPCKC-QLMFVHANCALRKKSKFNSAKCSSCG 87
>AF016677-5|AAB66143.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1240.6 protein.
Length = 128
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Frame = +1
Query: 619 LYECNVCKE--ISTDERFLKPKECCEYAICNACCVTMWKTATTHAK-CP 756
L+EC VC E DE + C ++IC +C + K CP
Sbjct: 3 LFECKVCNENYSDVDESHVPRVLTCGHSICQSCAAKQMSNSLILCKTCP 51
>Z48638-8|CAA88568.1| 237|Caenorhabditis elegans Hypothetical
protein ZK892.6 protein.
Length = 237
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -2
Query: 99 LRKRTLPRTNMAMTHSLTSLYFPGRSARDCWFL 1
L+K P+TN M H L + G+S++ C F+
Sbjct: 21 LKKGNFPKTNDGMQHDLVNDVLGGKSSKYCPFI 53
>Z81491-17|CAO82030.1| 959|Caenorhabditis elegans Hypothetical
protein F58D12.3 protein.
Length = 959
Score = 28.3 bits (60), Expect = 6.6
Identities = 24/90 (26%), Positives = 38/90 (42%)
Frame = +1
Query: 511 QMYVNELISNCLLFIEKLETINKTVKVMNLFVDNSVLYECNVCKEISTDERFLKPKECCE 690
++Y+NELI + +EKL T+ + L V+ + C +S D P E E
Sbjct: 543 ELYLNELIKDVSALMEKLNTVPLKYRANGLEVEFAKYINDIFC--VSFD----PPGETDE 596
Query: 691 YAICNACCVTMWKTATTHAKCPACGHRINK 780
I + C+T T K C +N+
Sbjct: 597 VTIKSENCLTPQTTGEKMFKLGHCERALNE 626
>Z81131-2|CAB03425.1| 349|Caenorhabditis elegans Hypothetical
protein T24D1.3 protein.
Length = 349
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = +1
Query: 625 ECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPAC 762
EC +C E+ L C + C C V +W +++ CP C
Sbjct: 273 ECTMCFEVPVSP--LGCNNCLQIIGCEEC-VDIWYRSSSKPSCPLC 315
>Z81092-2|CAB03145.3| 959|Caenorhabditis elegans Hypothetical
protein F58D12.3 protein.
Length = 959
Score = 28.3 bits (60), Expect = 6.6
Identities = 24/90 (26%), Positives = 38/90 (42%)
Frame = +1
Query: 511 QMYVNELISNCLLFIEKLETINKTVKVMNLFVDNSVLYECNVCKEISTDERFLKPKECCE 690
++Y+NELI + +EKL T+ + L V+ + C +S D P E E
Sbjct: 543 ELYLNELIKDVSALMEKLNTVPLKYRANGLEVEFAKYINDIFC--VSFD----PPGETDE 596
Query: 691 YAICNACCVTMWKTATTHAKCPACGHRINK 780
I + C+T T K C +N+
Sbjct: 597 VTIKSENCLTPQTTGEKMFKLGHCERALNE 626
>Z81131-4|CAD01083.1| 415|Caenorhabditis elegans Hypothetical
protein T24D1.5 protein.
Length = 415
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = +1
Query: 625 ECNVCKEISTDERFLKPKEC--CEYAICNACCVTMWKTATTHAKCPACGHR 771
+C +C E+ ++P+ C C+ I + C+ W CP C R
Sbjct: 346 DCTMCFEVP-----IEPQGCNRCQQIIGCSACIVHWHHHALSPSCPLCRRR 391
>Z50070-4|CAA90394.2| 172|Caenorhabditis elegans Hypothetical
protein F43G6.3 protein.
Length = 172
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -1
Query: 88 DVASHEYGDDAQFDVIIFS 32
D++ +E GDDA FDV+I S
Sbjct: 11 DLSDNELGDDASFDVLISS 29
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,774,464
Number of Sequences: 27780
Number of extensions: 417900
Number of successful extensions: 1299
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1291
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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