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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120052.Seq
         (762 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U24123-1|AAA65224.1|  646|Caenorhabditis elegans polyadenylate-b...    99   2e-21
AL032631-4|CAE54917.1|  586|Caenorhabditis elegans Hypothetical ...    99   2e-21
AL032631-3|CAE54916.1|  583|Caenorhabditis elegans Hypothetical ...    99   2e-21
AL032631-2|CAA21572.1|  646|Caenorhabditis elegans Hypothetical ...    99   2e-21
Z50110-2|CAA90446.1|  566|Caenorhabditis elegans Hypothetical pr...    97   9e-21
Z50110-1|CAA90444.1|  692|Caenorhabditis elegans Hypothetical pr...    97   9e-21
U28944-7|AAN63457.1|  295|Caenorhabditis elegans Hypothetical pr...    36   0.024
U28944-6|AAN63456.1|  305|Caenorhabditis elegans Hypothetical pr...    36   0.024
U28944-5|AAK68191.1|  408|Caenorhabditis elegans Hypothetical pr...    36   0.024
U28944-4|AAK68192.1|  376|Caenorhabditis elegans Hypothetical pr...    36   0.024
Z81473-3|CAB03896.4|  514|Caenorhabditis elegans Hypothetical pr...    36   0.041
AY342388-1|AAQ19851.1|  514|Caenorhabditis elegans putative RNA-...    36   0.041
U80455-3|AAO38606.1|  145|Caenorhabditis elegans Elav-type rna b...    35   0.055
U80455-2|AAB37882.2|  420|Caenorhabditis elegans Elav-type rna b...    35   0.055
U80455-1|AAB37881.1|  584|Caenorhabditis elegans Elav-type rna b...    35   0.055
U53931-1|AAA98566.1|  584|Caenorhabditis elegans elav-type ribon...    35   0.055
EF523770-1|ABS18836.1|  513|Caenorhabditis elegans ELAV-type RNA...    35   0.055
EF523766-1|ABS18832.1|  584|Caenorhabditis elegans ELAV-type RNA...    35   0.055
AC024818-2|AAF60781.1|  302|Caenorhabditis elegans Temporarily a...    33   0.22 
AL110485-8|CAB60356.1|  434|Caenorhabditis elegans Hypothetical ...    33   0.29 
Z46676-8|CAB60993.2|  388|Caenorhabditis elegans Hypothetical pr...    32   0.39 
U24189-3|AAC47514.1|  398|Caenorhabditis elegans RRM-type RNA bi...    32   0.39 
AF016451-3|AAB66001.1|  388|Caenorhabditis elegans Prion-like-(q...    32   0.39 
AF016451-5|AAB65995.1|  438|Caenorhabditis elegans Activated in ...    31   0.68 
AF000198-7|AAB53052.1|  418|Caenorhabditis elegans Collagen prot...    31   0.68 
U28944-8|AAK68193.1|  103|Caenorhabditis elegans Hypothetical pr...    31   1.2  
Z78536-3|CAB01717.2|  360|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z36238-4|CAD82915.1|  286|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z36238-3|CAA85276.1|  404|Caenorhabditis elegans Hypothetical pr...    30   1.6  
DQ485531-1|ABF22491.1|  404|Caenorhabditis elegans RNA-binding p...    30   1.6  
Z73102-13|CAA97405.1|  836|Caenorhabditis elegans Hypothetical p...    30   2.1  
Z70205-10|CAA94122.2|  887|Caenorhabditis elegans Hypothetical p...    30   2.1  
Z68003-5|CAA91979.2|  887|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z35640-1|CAA84705.1|  307|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AL132860-5|CAB60515.1|  798|Caenorhabditis elegans Hypothetical ...    29   2.7  
AC024791-23|AAM81102.1|  346|Caenorhabditis elegans Rnp (rrm rna...    29   2.7  
AC024791-22|AAF60676.1|  339|Caenorhabditis elegans Rnp (rrm rna...    29   2.7  
AC024791-21|AAF60666.1|  749|Caenorhabditis elegans Rnp (rrm rna...    29   2.7  
Z98866-26|CAM33505.1|  559|Caenorhabditis elegans Hypothetical p...    29   3.6  
Z83127-4|CAB05631.1|  872|Caenorhabditis elegans Hypothetical pr...    29   3.6  
AL032625-4|CAB63350.2|  792|Caenorhabditis elegans Hypothetical ...    29   3.6  
AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain, ...    29   4.8  
Z83107-6|CAD92391.1|  877|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z83107-5|CAD92390.1|  764|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z83107-4|CAB05498.1|  878|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z36752-6|CAA85327.1|  456|Caenorhabditis elegans Hypothetical pr...    28   6.3  
AC024845-3|AAF60852.1|  619|Caenorhabditis elegans Hypothetical ...    28   6.3  
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr...    28   8.3  
D10877-1|BAA01645.1|  346|Caenorhabditis elegans hnRNP like prot...    28   8.3  
AF038613-8|AAL02515.2|  309|Caenorhabditis elegans Human hnrnp a...    28   8.3  
AF038613-7|ABB51185.1|  308|Caenorhabditis elegans Human hnrnp a...    28   8.3  
AF038613-6|ABB51186.1|  347|Caenorhabditis elegans Human hnrnp a...    28   8.3  
AF038613-5|AAB92051.1|  346|Caenorhabditis elegans Human hnrnp a...    28   8.3  
AC024844-6|AAK29956.1|  442|Caenorhabditis elegans Hypothetical ...    28   8.3  

>U24123-1|AAA65224.1|  646|Caenorhabditis elegans
           polyadenylate-binding protein protein.
          Length = 646

 Score =   99 bits (238), Expect = 2e-21
 Identities = 48/74 (64%), Positives = 61/74 (82%), Gaps = 1/74 (1%)
 Frame = +1

Query: 34  LYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTI 213
           L+V RAQKK+ER  ELK+K EQ K+ER+ +YQGVNLYVKNLD+T+DD+ L+K+F  +G I
Sbjct: 284 LHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNI 343

Query: 214 TSAKVML-EDGRIK 252
           TSAKVM  E+GR K
Sbjct: 344 TSAKVMTDENGRSK 357



 Score = 70.5 bits (165), Expect = 1e-12
 Identities = 31/43 (72%), Positives = 36/43 (83%)
 Frame = +2

Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
           GFVCF  PEEAT AVTEMN ++V +KPLYVA+ QRKEDR+A L
Sbjct: 360 GFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIGQRKEDRRAQL 402



 Score = 54.8 bits (126), Expect = 6e-08
 Identities = 34/84 (40%), Positives = 47/84 (55%)
 Frame = +1

Query: 1   LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
           +NG  L+ GK ++VG+ Q +A+R +EL            T  Q  N+YVKN  D  + E 
Sbjct: 180 VNGM-LLAGKKVFVGKFQPRAQRNRELGE----------TAKQFTNVYVKNFGDHYNKET 228

Query: 181 LRKEFAPFGTITSAKVMLEDGRIK 252
           L K FA FG ITS +VM  +G+ K
Sbjct: 229 LEKVFAKFGNITSCEVMTVEGKSK 252



 Score = 37.1 bits (82), Expect = 0.014
 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
 Frame = +1

Query: 136 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDG 243
           N+++KNLD  ID++ +   F+ FG I S KV + EDG
Sbjct: 121 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDG 157



 Score = 35.5 bits (78), Expect = 0.041
 Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
 Frame = +2

Query: 257 GFVCFSSPEEATKAVTEM-NGRIVGTK-PLYVALAQRKEDRKAHL 385
           GFV F++PEEA  AV  + +  I GT   L+V  AQ+K +R A L
Sbjct: 255 GFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKKSERHAEL 299



 Score = 30.7 bits (66), Expect = 1.2
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +2

Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
           GFV F + E A  A+ ++NG ++  K ++V   Q +  R   L
Sbjct: 163 GFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNREL 205


>AL032631-4|CAE54917.1|  586|Caenorhabditis elegans Hypothetical
           protein Y106G6H.2c protein.
          Length = 586

 Score =   99 bits (238), Expect = 2e-21
 Identities = 48/74 (64%), Positives = 61/74 (82%), Gaps = 1/74 (1%)
 Frame = +1

Query: 34  LYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTI 213
           L+V RAQKK+ER  ELK+K EQ K+ER+ +YQGVNLYVKNLD+T+DD+ L+K+F  +G I
Sbjct: 224 LHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNI 283

Query: 214 TSAKVML-EDGRIK 252
           TSAKVM  E+GR K
Sbjct: 284 TSAKVMTDENGRSK 297



 Score = 72.1 bits (169), Expect = 4e-13
 Identities = 32/43 (74%), Positives = 37/43 (86%)
 Frame = +2

Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
           GFVCF  PEEAT AVTEMN ++V +KPLYVA+AQRKEDR+A L
Sbjct: 300 GFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQRKEDRRAQL 342



 Score = 48.4 bits (110), Expect = 6e-06
 Identities = 29/73 (39%), Positives = 40/73 (54%)
 Frame = +1

Query: 34  LYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTI 213
           ++VG+ Q +A+R +EL            T  Q  N+YVKN  D  + E L K FA FG I
Sbjct: 130 VFVGKFQPRAQRNRELGE----------TAKQFTNVYVKNFGDHYNKETLEKLFAKFGNI 179

Query: 214 TSAKVMLEDGRIK 252
           TS +VM  +G+ K
Sbjct: 180 TSCEVMTVEGKSK 192



 Score = 35.5 bits (78), Expect = 0.041
 Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
 Frame = +2

Query: 257 GFVCFSSPEEATKAVTEM-NGRIVGTK-PLYVALAQRKEDRKAHL 385
           GFV F++PEEA  AV  + +  I GT   L+V  AQ+K +R A L
Sbjct: 195 GFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKKSERHAEL 239



 Score = 29.1 bits (62), Expect = 3.6
 Identities = 16/40 (40%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
 Frame = +1

Query: 1   LNGKELVEGKPLYVGRAQKKAERQKELKRKF-EQLKSERL 117
           +N K +V  KPLYV  AQ+K +R+ +L  ++ ++L S R+
Sbjct: 317 MNSK-MVCSKPLYVAIAQRKEDRRAQLASQYMQRLASMRM 355


>AL032631-3|CAE54916.1|  583|Caenorhabditis elegans Hypothetical
           protein Y106G6H.2b protein.
          Length = 583

 Score =   99 bits (238), Expect = 2e-21
 Identities = 48/74 (64%), Positives = 61/74 (82%), Gaps = 1/74 (1%)
 Frame = +1

Query: 34  LYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTI 213
           L+V RAQKK+ER  ELK+K EQ K+ER+ +YQGVNLYVKNLD+T+DD+ L+K+F  +G I
Sbjct: 221 LHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNI 280

Query: 214 TSAKVML-EDGRIK 252
           TSAKVM  E+GR K
Sbjct: 281 TSAKVMTDENGRSK 294



 Score = 72.1 bits (169), Expect = 4e-13
 Identities = 32/43 (74%), Positives = 37/43 (86%)
 Frame = +2

Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
           GFVCF  PEEAT AVTEMN ++V +KPLYVA+AQRKEDR+A L
Sbjct: 297 GFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQRKEDRRAQL 339



 Score = 54.4 bits (125), Expect = 8e-08
 Identities = 34/84 (40%), Positives = 47/84 (55%)
 Frame = +1

Query: 1   LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
           +NG  L+ GK ++VG+ Q +A+R +EL            T  Q  N+YVKN  D  + E 
Sbjct: 117 VNGM-LLAGKKVFVGKFQPRAQRNRELGE----------TAKQFTNVYVKNFGDHYNKET 165

Query: 181 LRKEFAPFGTITSAKVMLEDGRIK 252
           L K FA FG ITS +VM  +G+ K
Sbjct: 166 LEKLFAKFGNITSCEVMTVEGKSK 189



 Score = 37.1 bits (82), Expect = 0.014
 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
 Frame = +1

Query: 136 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDG 243
           N+++KNLD  ID++ +   F+ FG I S KV + EDG
Sbjct: 58  NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDG 94



 Score = 35.5 bits (78), Expect = 0.041
 Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
 Frame = +2

Query: 257 GFVCFSSPEEATKAVTEM-NGRIVGTK-PLYVALAQRKEDRKAHL 385
           GFV F++PEEA  AV  + +  I GT   L+V  AQ+K +R A L
Sbjct: 192 GFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKKSERHAEL 236



 Score = 30.7 bits (66), Expect = 1.2
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +2

Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
           GFV F + E A  A+ ++NG ++  K ++V   Q +  R   L
Sbjct: 100 GFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNREL 142



 Score = 29.1 bits (62), Expect = 3.6
 Identities = 16/40 (40%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
 Frame = +1

Query: 1   LNGKELVEGKPLYVGRAQKKAERQKELKRKF-EQLKSERL 117
           +N K +V  KPLYV  AQ+K +R+ +L  ++ ++L S R+
Sbjct: 314 MNSK-MVCSKPLYVAIAQRKEDRRAQLASQYMQRLASMRM 352


>AL032631-2|CAA21572.1|  646|Caenorhabditis elegans Hypothetical
           protein Y106G6H.2a protein.
          Length = 646

 Score =   99 bits (238), Expect = 2e-21
 Identities = 48/74 (64%), Positives = 61/74 (82%), Gaps = 1/74 (1%)
 Frame = +1

Query: 34  LYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTI 213
           L+V RAQKK+ER  ELK+K EQ K+ER+ +YQGVNLYVKNLD+T+DD+ L+K+F  +G I
Sbjct: 284 LHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNI 343

Query: 214 TSAKVML-EDGRIK 252
           TSAKVM  E+GR K
Sbjct: 344 TSAKVMTDENGRSK 357



 Score = 72.1 bits (169), Expect = 4e-13
 Identities = 32/43 (74%), Positives = 37/43 (86%)
 Frame = +2

Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
           GFVCF  PEEAT AVTEMN ++V +KPLYVA+AQRKEDR+A L
Sbjct: 360 GFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQRKEDRRAQL 402



 Score = 54.4 bits (125), Expect = 8e-08
 Identities = 34/84 (40%), Positives = 47/84 (55%)
 Frame = +1

Query: 1   LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
           +NG  L+ GK ++VG+ Q +A+R +EL            T  Q  N+YVKN  D  + E 
Sbjct: 180 VNGM-LLAGKKVFVGKFQPRAQRNRELGE----------TAKQFTNVYVKNFGDHYNKET 228

Query: 181 LRKEFAPFGTITSAKVMLEDGRIK 252
           L K FA FG ITS +VM  +G+ K
Sbjct: 229 LEKLFAKFGNITSCEVMTVEGKSK 252



 Score = 37.1 bits (82), Expect = 0.014
 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
 Frame = +1

Query: 136 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDG 243
           N+++KNLD  ID++ +   F+ FG I S KV + EDG
Sbjct: 121 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDG 157



 Score = 35.5 bits (78), Expect = 0.041
 Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
 Frame = +2

Query: 257 GFVCFSSPEEATKAVTEM-NGRIVGTK-PLYVALAQRKEDRKAHL 385
           GFV F++PEEA  AV  + +  I GT   L+V  AQ+K +R A L
Sbjct: 255 GFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKKSERHAEL 299



 Score = 30.7 bits (66), Expect = 1.2
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +2

Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
           GFV F + E A  A+ ++NG ++  K ++V   Q +  R   L
Sbjct: 163 GFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNREL 205



 Score = 29.1 bits (62), Expect = 3.6
 Identities = 16/40 (40%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
 Frame = +1

Query: 1   LNGKELVEGKPLYVGRAQKKAERQKELKRKF-EQLKSERL 117
           +N K +V  KPLYV  AQ+K +R+ +L  ++ ++L S R+
Sbjct: 377 MNSK-MVCSKPLYVAIAQRKEDRRAQLASQYMQRLASMRM 415


>Z50110-2|CAA90446.1|  566|Caenorhabditis elegans Hypothetical
           protein F18H3.3b protein.
          Length = 566

 Score = 97.5 bits (232), Expect = 9e-21
 Identities = 48/74 (64%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
 Frame = +1

Query: 34  LYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTI 213
           L V RAQKK+ER  ELKRK+E LK ER+ RYQGVNLYVKN+++ ++D+ LR  F+ FGTI
Sbjct: 310 LSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDGLRDHFSSFGTI 369

Query: 214 TSAKVML-EDGRIK 252
           TSAKVM+ E+GR K
Sbjct: 370 TSAKVMVDENGRSK 383



 Score = 74.1 bits (174), Expect = 1e-13
 Identities = 32/43 (74%), Positives = 37/43 (86%)
 Frame = +2

Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
           GFVCF  PEEAT AVT+MN +++G KPLYVALAQRKEDR+A L
Sbjct: 386 GFVCFEKPEEATAAVTDMNSKMIGAKPLYVALAQRKEDRRAQL 428



 Score = 48.0 bits (109), Expect = 7e-06
 Identities = 31/79 (39%), Positives = 45/79 (56%)
 Frame = +1

Query: 1   LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
           +NG  L+  K +YVG+ Q +A+R KEL         E   +Y   N++VKN  + +D E+
Sbjct: 205 VNGM-LLSDKKVYVGKFQPRAQRMKEL--------GESGLKY--TNVFVKNFGEHLDQEK 253

Query: 181 LRKEFAPFGTITSAKVMLE 237
           L   F+ FG ITSA VM +
Sbjct: 254 LSAMFSKFGEITSAVVMTD 272



 Score = 35.9 bits (79), Expect = 0.031
 Identities = 15/35 (42%), Positives = 23/35 (65%)
 Frame = +1

Query: 136 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 240
           N+++KNLD  ID++ +   F+ FG I S KV  +D
Sbjct: 146 NIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDD 180



 Score = 30.3 bits (65), Expect = 1.6
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +2

Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
           GFV F +   A  A+ ++NG ++  K +YV   Q +  R   L
Sbjct: 188 GFVHFETEHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKEL 230



 Score = 29.5 bits (63), Expect = 2.7
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = +1

Query: 1   LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 99
           +N K ++  KPLYV  AQ+K +R+ +L  ++ Q
Sbjct: 403 MNSK-MIGAKPLYVALAQRKEDRRAQLASQYMQ 434


>Z50110-1|CAA90444.1|  692|Caenorhabditis elegans Hypothetical
           protein F18H3.3a protein.
          Length = 692

 Score = 97.5 bits (232), Expect = 9e-21
 Identities = 48/74 (64%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
 Frame = +1

Query: 34  LYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTI 213
           L V RAQKK+ER  ELKRK+E LK ER+ RYQGVNLYVKN+++ ++D+ LR  F+ FGTI
Sbjct: 310 LSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDGLRDHFSSFGTI 369

Query: 214 TSAKVML-EDGRIK 252
           TSAKVM+ E+GR K
Sbjct: 370 TSAKVMVDENGRSK 383



 Score = 74.1 bits (174), Expect = 1e-13
 Identities = 32/43 (74%), Positives = 37/43 (86%)
 Frame = +2

Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
           GFVCF  PEEAT AVT+MN +++G KPLYVALAQRKEDR+A L
Sbjct: 386 GFVCFEKPEEATAAVTDMNSKMIGAKPLYVALAQRKEDRRAQL 428



 Score = 48.0 bits (109), Expect = 7e-06
 Identities = 31/79 (39%), Positives = 45/79 (56%)
 Frame = +1

Query: 1   LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
           +NG  L+  K +YVG+ Q +A+R KEL         E   +Y   N++VKN  + +D E+
Sbjct: 205 VNGM-LLSDKKVYVGKFQPRAQRMKEL--------GESGLKY--TNVFVKNFGEHLDQEK 253

Query: 181 LRKEFAPFGTITSAKVMLE 237
           L   F+ FG ITSA VM +
Sbjct: 254 LSAMFSKFGEITSAVVMTD 272



 Score = 35.9 bits (79), Expect = 0.031
 Identities = 15/35 (42%), Positives = 23/35 (65%)
 Frame = +1

Query: 136 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 240
           N+++KNLD  ID++ +   F+ FG I S KV  +D
Sbjct: 146 NIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDD 180



 Score = 30.3 bits (65), Expect = 1.6
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +2

Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
           GFV F +   A  A+ ++NG ++  K +YV   Q +  R   L
Sbjct: 188 GFVHFETEHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKEL 230



 Score = 29.5 bits (63), Expect = 2.7
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = +1

Query: 1   LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 99
           +N K ++  KPLYV  AQ+K +R+ +L  ++ Q
Sbjct: 403 MNSK-MIGAKPLYVALAQRKEDRRAQLASQYMQ 434


>U28944-7|AAN63457.1|  295|Caenorhabditis elegans Hypothetical
           protein C18A3.5f protein.
          Length = 295

 Score = 36.3 bits (80), Expect = 0.024
 Identities = 13/41 (31%), Positives = 28/41 (68%)
 Frame = +1

Query: 136 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRIKAR 258
           +++V +L   +D+++LR+ F PFG ++ AKV+ +    K++
Sbjct: 23  HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSK 63



 Score = 31.9 bits (69), Expect = 0.51
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +2

Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 364
           GFV +   EEA +A+ +MNG+ +G + +    A RK
Sbjct: 66  GFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 101


>U28944-6|AAN63456.1|  305|Caenorhabditis elegans Hypothetical
           protein C18A3.5e protein.
          Length = 305

 Score = 36.3 bits (80), Expect = 0.024
 Identities = 13/41 (31%), Positives = 28/41 (68%)
 Frame = +1

Query: 136 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRIKAR 258
           +++V +L   +D+++LR+ F PFG ++ AKV+ +    K++
Sbjct: 33  HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSK 73



 Score = 31.9 bits (69), Expect = 0.51
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +2

Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 364
           GFV +   EEA +A+ +MNG+ +G + +    A RK
Sbjct: 76  GFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 111


>U28944-5|AAK68191.1|  408|Caenorhabditis elegans Hypothetical
           protein C18A3.5a protein.
          Length = 408

 Score = 36.3 bits (80), Expect = 0.024
 Identities = 13/41 (31%), Positives = 28/41 (68%)
 Frame = +1

Query: 136 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRIKAR 258
           +++V +L   +D+++LR+ F PFG ++ AKV+ +    K++
Sbjct: 136 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSK 176



 Score = 31.9 bits (69), Expect = 0.51
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +2

Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 364
           GFV +   EEA +A+ +MNG+ +G + +    A RK
Sbjct: 179 GFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 214



 Score = 29.9 bits (64), Expect = 2.1
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +1

Query: 139 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
           LYV NLD T+ ++ +   F   G++T  KV+ +
Sbjct: 48  LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD 80


>U28944-4|AAK68192.1|  376|Caenorhabditis elegans Hypothetical
           protein C18A3.5b protein.
          Length = 376

 Score = 36.3 bits (80), Expect = 0.024
 Identities = 13/41 (31%), Positives = 28/41 (68%)
 Frame = +1

Query: 136 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRIKAR 258
           +++V +L   +D+++LR+ F PFG ++ AKV+ +    K++
Sbjct: 104 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSK 144



 Score = 31.9 bits (69), Expect = 0.51
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +2

Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 364
           GFV +   EEA +A+ +MNG+ +G + +    A RK
Sbjct: 147 GFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 182



 Score = 31.5 bits (68), Expect = 0.68
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = +1

Query: 139 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRI 249
           LYV NLD T+ ++ +   F   G++T  KV+ ++ ++
Sbjct: 48  LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDEMKV 84


>Z81473-3|CAB03896.4|  514|Caenorhabditis elegans Hypothetical
           protein C17D12.2 protein.
          Length = 514

 Score = 35.5 bits (78), Expect = 0.041
 Identities = 19/63 (30%), Positives = 31/63 (49%)
 Frame = +1

Query: 49  AQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKV 228
           A + A+ Q++       +    +    G NL++ +L     D  L + FAPFG I SAKV
Sbjct: 401 ALQLAQIQQQAAAALPMVTPREVLGPDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKV 460

Query: 229 MLE 237
            ++
Sbjct: 461 FVD 463



 Score = 28.7 bits (61), Expect = 4.8
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +2

Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ-RKEDR 373
           GFV + +   +  A+T MNG  +G K L V L + R E R
Sbjct: 473 GFVSYDNIHSSQAAITAMNGFQIGMKRLKVQLKRPRNESR 512


>AY342388-1|AAQ19851.1|  514|Caenorhabditis elegans putative
           RNA-binding protein protein.
          Length = 514

 Score = 35.5 bits (78), Expect = 0.041
 Identities = 19/63 (30%), Positives = 31/63 (49%)
 Frame = +1

Query: 49  AQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKV 228
           A + A+ Q++       +    +    G NL++ +L     D  L + FAPFG I SAKV
Sbjct: 401 ALQLAQIQQQAAAALPMVTPREVLGPDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKV 460

Query: 229 MLE 237
            ++
Sbjct: 461 FVD 463



 Score = 28.7 bits (61), Expect = 4.8
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +2

Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ-RKEDR 373
           GFV + +   +  A+T MNG  +G K L V L + R E R
Sbjct: 473 GFVSYDNIHSSQAAITAMNGFQIGMKRLKVQLKRPRNESR 512


>U80455-3|AAO38606.1|  145|Caenorhabditis elegans Elav-type rna
           binding protein familyprotein 1, isoform c protein.
          Length = 145

 Score = 35.1 bits (77), Expect = 0.055
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +1

Query: 130 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
           G NL++ +L     D  L   FAPFG I SAKV ++
Sbjct: 75  GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFID 110


>U80455-2|AAB37882.2|  420|Caenorhabditis elegans Elav-type rna
           binding protein familyprotein 1, isoform b protein.
          Length = 420

 Score = 35.1 bits (77), Expect = 0.055
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +1

Query: 130 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
           G NL++ +L     D  L   FAPFG I SAKV ++
Sbjct: 334 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFID 369



 Score = 31.9 bits (69), Expect = 0.51
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +2

Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL 352
           GFV + + + AT A++ MNG  +G+K L V L
Sbjct: 379 GFVSYENAQSATNAISAMNGFQIGSKRLKVQL 410


>U80455-1|AAB37881.1|  584|Caenorhabditis elegans Elav-type rna
           binding protein familyprotein 1, isoform a protein.
          Length = 584

 Score = 35.1 bits (77), Expect = 0.055
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +1

Query: 130 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
           G NL++ +L     D  L   FAPFG I SAKV ++
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFID 533



 Score = 31.9 bits (69), Expect = 0.51
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +2

Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL 352
           GFV + + + AT A++ MNG  +G+K L V L
Sbjct: 543 GFVSYENAQSATNAISAMNGFQIGSKRLKVQL 574


>U53931-1|AAA98566.1|  584|Caenorhabditis elegans elav-type
           ribonucleoprotein protein.
          Length = 584

 Score = 35.1 bits (77), Expect = 0.055
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +1

Query: 130 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
           G NL++ +L     D  L   FAPFG I SAKV ++
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFID 533



 Score = 31.9 bits (69), Expect = 0.51
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +2

Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL 352
           GFV + + + AT A++ MNG  +G+K L V L
Sbjct: 543 GFVSYENAQSATNAISAMNGFQIGSKRLKVQL 574


>EF523770-1|ABS18836.1|  513|Caenorhabditis elegans ELAV-type RNA
           binding protein variantE protein.
          Length = 513

 Score = 35.1 bits (77), Expect = 0.055
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +1

Query: 130 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
           G NL++ +L     D  L   FAPFG I SAKV ++
Sbjct: 427 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFID 462



 Score = 31.9 bits (69), Expect = 0.51
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +2

Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL 352
           GFV + + + AT A++ MNG  +G+K L V L
Sbjct: 472 GFVSYENAQSATNAISAMNGFQIGSKRLKVQL 503


>EF523766-1|ABS18832.1|  584|Caenorhabditis elegans ELAV-type RNA
           binding protein variantA protein.
          Length = 584

 Score = 35.1 bits (77), Expect = 0.055
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +1

Query: 130 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
           G NL++ +L     D  L   FAPFG I SAKV ++
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFID 533



 Score = 31.9 bits (69), Expect = 0.51
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +2

Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL 352
           GFV + + + AT A++ MNG  +G+K L V L
Sbjct: 543 GFVSYENAQSATNAISAMNGFQIGSKRLKVQL 574


>AC024818-2|AAF60781.1|  302|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 262 protein.
          Length = 302

 Score = 33.1 bits (72), Expect = 0.22
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +2

Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKE 367
           GFV F   E+  +A+ EM+G+ VG +P+ +  +  KE
Sbjct: 247 GFVSFRDSEDYVRAMREMDGKYVGNRPIKLRKSAWKE 283


>AL110485-8|CAB60356.1|  434|Caenorhabditis elegans Hypothetical
           protein Y46G5A.13 protein.
          Length = 434

 Score = 32.7 bits (71), Expect = 0.29
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +2

Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKED 370
           GFV +   E+A +A+ EMNG  +G + +    A RK D
Sbjct: 176 GFVSYPRREDAERAIDEMNGAWLGRRTIRTNWATRKPD 213



 Score = 29.9 bits (64), Expect = 2.1
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1

Query: 139 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
           L+V NLD  I DE L   F   G +  AK++ E
Sbjct: 42  LFVANLDPAITDEFLATLFNQIGAVMKAKIIFE 74


>Z46676-8|CAB60993.2|  388|Caenorhabditis elegans Hypothetical
           protein C08B11.5 protein.
          Length = 388

 Score = 32.3 bits (70), Expect = 0.39
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 130 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 240
           G N++V NLD  +D++ L   F+ FG I     ++ D
Sbjct: 99  GANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRD 135


>U24189-3|AAC47514.1|  398|Caenorhabditis elegans RRM-type RNA
           binding protein protein.
          Length = 398

 Score = 32.3 bits (70), Expect = 0.39
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 130 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 240
           G N++V NLD  +D++ L   F+ FG I     ++ D
Sbjct: 109 GANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRD 145


>AF016451-3|AAB66001.1|  388|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 5
           protein.
          Length = 388

 Score = 32.3 bits (70), Expect = 0.39
 Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
 Frame = +3

Query: 471 LYHRSLQHHVTMDSSNDSNKTYNSKVECTAPCKPSTQAASAYANMQPTYRP---APRAPA 641
           +Y++++  +      N  N   N    C   C+P+   +      QP Y+P      APA
Sbjct: 241 VYNQNMNQNTNTQMYNPYNTNTNQNANCAPACQPACDNSCTSQQTQPMYQPYDTTTEAPA 300

Query: 642 Q 644
           Q
Sbjct: 301 Q 301


>AF016451-5|AAB65995.1|  438|Caenorhabditis elegans Activated in
           blocked unfolded proteinresponse protein 7 protein.
          Length = 438

 Score = 31.5 bits (68), Expect = 0.68
 Identities = 20/86 (23%), Positives = 33/86 (38%), Gaps = 1/86 (1%)
 Frame = +3

Query: 471 LYHRSLQHHVTMDSSNDSNKTYNSKVECTAPCKPSTQAASAYANMQPTYRPA-PRAPAQS 647
           +Y++++  +      N  N   N    C   C+P+   +      QP Y+ A P    Q 
Sbjct: 241 VYNQNMNQNTNTQMYNPYNTNTNQNANCAPACQPACDNSCTSQQAQPVYQQAQPTYQVQQ 300

Query: 648 TIRTSLGARPITGQQGVAAAAASIRP 725
           T  T+         QG A  A + +P
Sbjct: 301 T--TAAPMYDPYNNQGSANCAPACQP 324


>AF000198-7|AAB53052.1|  418|Caenorhabditis elegans Collagen protein
           50 protein.
          Length = 418

 Score = 31.5 bits (68), Expect = 0.68
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = +3

Query: 597 ANMQPTYRPAPRAPAQSTIRTSLGARPITGQQGVAAAAASIRPPLVSQSSRP 752
           A   P   PA  A  Q     +  A P  G QG AAA A+  PP  + ++ P
Sbjct: 329 AGAAPEAAPAAAAAPQPAPAPAAAAAPAGGYQGGAAAGAAAPPPAPAAAAAP 380


>U28944-8|AAK68193.1|  103|Caenorhabditis elegans Hypothetical
           protein C18A3.5c protein.
          Length = 103

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +1

Query: 139 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 240
           LYV NLD T+ ++ +   F   G++T  KV+ ++
Sbjct: 48  LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81


>Z78536-3|CAB01717.2|  360|Caenorhabditis elegans Hypothetical
           protein C07A4.1 protein.
          Length = 360

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +2

Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK--EDRKAHLT 388
           GFV F + + A  A+  MNG+ +G + +    A RK  E+ +  LT
Sbjct: 179 GFVSFPNKQNAENAIAGMNGKWIGKRAVRTNWAARKNSEENRDKLT 224


>Z36238-4|CAD82915.1|  286|Caenorhabditis elegans Hypothetical
           protein R74.5b protein.
          Length = 286

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +2

Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA-QRKEDRKA 379
           GFV   +P++A +A  E NG  +  + + V LA QR  ++KA
Sbjct: 24  GFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNKKA 65


>Z36238-3|CAA85276.1|  404|Caenorhabditis elegans Hypothetical
           protein R74.5a protein.
          Length = 404

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +2

Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA-QRKEDRKA 379
           GFV   +P++A +A  E NG  +  + + V LA QR  ++KA
Sbjct: 142 GFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNKKA 183


>DQ485531-1|ABF22491.1|  404|Caenorhabditis elegans RNA-binding
           protein ASD-1 protein.
          Length = 404

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +2

Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA-QRKEDRKA 379
           GFV   +P++A +A  E NG  +  + + V LA QR  ++KA
Sbjct: 142 GFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNKKA 183


>Z73102-13|CAA97405.1|  836|Caenorhabditis elegans Hypothetical
           protein B0035.12 protein.
          Length = 836

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = +1

Query: 118 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSA-KVMLEDGRIK 252
           T  +   ++V+N+     D+ L+  F+ FGT+TS  +V  +DG+ K
Sbjct: 678 TTLEKSKVFVRNVHFQATDDELKALFSKFGTVTSVRRVTHKDGKPK 723


>Z70205-10|CAA94122.2|  887|Caenorhabditis elegans Hypothetical
           protein E02H4.3a protein.
          Length = 887

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
 Frame = +3

Query: 522 SNKTYNSKVECTAPCKPSTQAASAYA---NMQPT---YRPAPRAPAQSTIRTSLGARPIT 683
           + KT  + +   +      +AASA A   N  P     +P+P APA + +R    A+P  
Sbjct: 205 TEKTEKAVLRIPSSASTRAKAASAVAPEANPAPVPTATKPSPFAPAIAPLRDGAPAQPPA 264

Query: 684 GQQGVAAAAASIRPPLVSQSS 746
             Q    A+A +RPP+  Q+S
Sbjct: 265 PIQ----ASAPLRPPVAKQNS 281


>Z68003-5|CAA91979.2|  887|Caenorhabditis elegans Hypothetical
           protein E02H4.3a protein.
          Length = 887

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
 Frame = +3

Query: 522 SNKTYNSKVECTAPCKPSTQAASAYA---NMQPT---YRPAPRAPAQSTIRTSLGARPIT 683
           + KT  + +   +      +AASA A   N  P     +P+P APA + +R    A+P  
Sbjct: 205 TEKTEKAVLRIPSSASTRAKAASAVAPEANPAPVPTATKPSPFAPAIAPLRDGAPAQPPA 264

Query: 684 GQQGVAAAAASIRPPLVSQSS 746
             Q    A+A +RPP+  Q+S
Sbjct: 265 PIQ----ASAPLRPPVAKQNS 281


>Z35640-1|CAA84705.1|  307|Caenorhabditis elegans Hypothetical
           protein F43D9.2 protein.
          Length = 307

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 16/66 (24%), Positives = 28/66 (42%)
 Frame = +3

Query: 438 KYSSLVVQVDFLYHRSLQHHVTMDSSNDSNKTYNSKVECTAPCKPSTQAASAYANMQPTY 617
           ++S+    +D   H +  H   + +++    T+ S  +  +P  PST     Y    P  
Sbjct: 12  QFSTYATVIDPPKHVTATHPDELTTASHPQPTHPSAPQDPSPAVPSTPVRVPYPTAPPPI 71

Query: 618 RPAPRA 635
            PAP A
Sbjct: 72  PPAPEA 77


>AL132860-5|CAB60515.1|  798|Caenorhabditis elegans Hypothetical
           protein Y56A3A.6 protein.
          Length = 798

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 19/71 (26%), Positives = 33/71 (46%)
 Frame = +3

Query: 516 NDSNKTYNSKVECTAPCKPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARPITGQQG 695
           ++S      + +  AP  P   AA+A A + P   P P++PA + +       P   Q  
Sbjct: 119 DESPIVQKQRTKRAAPPPPPPPAAAAAAPISPKAAPTPQSPAPNRV-------PHYRQTS 171

Query: 696 VAAAAASIRPP 728
            A+ +++I PP
Sbjct: 172 TASVSSTIPPP 182


>AC024791-23|AAM81102.1|  346|Caenorhabditis elegans Rnp (rrm rna
           binding domain) containingprotein 6, isoform c protein.
          Length = 346

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 15/54 (27%), Positives = 32/54 (59%)
 Frame = +1

Query: 58  KAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITS 219
           + ++Q++  ++ +Q+ S+ L+      +YV ++   I ++ LR+ F PFG I S
Sbjct: 79  RQQKQQQENQQRQQMYSQALSIMS--RIYVGSISFEIREDMLRRAFDPFGPIKS 130


>AC024791-22|AAF60676.1|  339|Caenorhabditis elegans Rnp (rrm rna
           binding domain) containingprotein 6, isoform a protein.
          Length = 339

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 15/54 (27%), Positives = 32/54 (59%)
 Frame = +1

Query: 58  KAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITS 219
           + ++Q++  ++ +Q+ S+ L+      +YV ++   I ++ LR+ F PFG I S
Sbjct: 79  RQQKQQQENQQRQQMYSQALSIMS--RIYVGSISFEIREDMLRRAFDPFGPIKS 130


>AC024791-21|AAF60666.1|  749|Caenorhabditis elegans Rnp (rrm rna
           binding domain) containingprotein 6, isoform b protein.
          Length = 749

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 15/54 (27%), Positives = 32/54 (59%)
 Frame = +1

Query: 58  KAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITS 219
           + ++Q++  ++ +Q+ S+ L+      +YV ++   I ++ LR+ F PFG I S
Sbjct: 79  RQQKQQQENQQRQQMYSQALSIMS--RIYVGSISFEIREDMLRRAFDPFGPIKS 130


>Z98866-26|CAM33505.1|  559|Caenorhabditis elegans Hypothetical
           protein Y49E10.29 protein.
          Length = 559

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 20/63 (31%), Positives = 27/63 (42%)
 Frame = +3

Query: 537 NSKVECTAPCKPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARPITGQQGVAAAAAS 716
           +S+    AP KP+ Q A       P   P+P  PAQ        A+P+T QQ  A   + 
Sbjct: 391 SSQQATQAPPKPAPQQAPPVQQNPPKPTPSPAPPAQK-------AQPVTQQQASAPPTSP 443

Query: 717 IRP 725
             P
Sbjct: 444 SAP 446


>Z83127-4|CAB05631.1|  872|Caenorhabditis elegans Hypothetical
           protein T23F6.4 protein.
          Length = 872

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +1

Query: 139 LYVKNLDDTIDDERLRKEFAPFGTITSAKV 228
           L VKNL  T  +++LRK F  +G I+ A +
Sbjct: 5   LIVKNLPSTCTEQQLRKFFEKYGQISDASL 34


>AL032625-4|CAB63350.2|  792|Caenorhabditis elegans Hypothetical
           protein Y37H9A.3 protein.
          Length = 792

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 4/97 (4%)
 Frame = +3

Query: 474 YHRSLQHHVTMDSSNDSNKTYNSKVECTAPCKPSTQAASAYANMQPTYRPAPRAPAQSTI 653
           Y R++   V +  + +  KT +      AP   S+ AA       PT +PA   PA    
Sbjct: 165 YKRAVDKLVELIRAVERGKTIDESEIPVAPPNFSSAAAEPLPPPAPTAQPAHHPPAPPIR 224

Query: 654 RTSLGAR----PITGQQGVAAAAASIRPPLVSQSSRP 752
           + +  A     PI  ++  A A  +  PP   + + P
Sbjct: 225 QAAHAAESSPPPIPQRKSSAPAPTAAAPPATKEPTDP 261


>AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain,
            unconventional myosinprotein 8, isoform a protein.
          Length = 1219

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 11/17 (64%), Positives = 16/17 (94%)
 Frame = +1

Query: 49   AQKKAERQKELKRKFEQ 99
            A+K+AERQ+E+KRK E+
Sbjct: 966  AKKEAERQREIKRKLEE 982


>Z83107-6|CAD92391.1|  877|Caenorhabditis elegans Hypothetical
           protein F32A7.5c protein.
          Length = 877

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
 Frame = +3

Query: 543 KVECTAPCKPSTQA-ASAYANMQPTYRPAPRAPAQSTIRTSLGARPITGQQGVAAAAASI 719
           KV+ TAP KP+  A ASA  +  P      R P   TI       P    QG A     +
Sbjct: 350 KVQGTAPSKPAPAAPASAATSPAPAPEAPRRDPNNVTIVLDDSLSPEDFNQGSAPMDIVV 409

Query: 720 RPP 728
            PP
Sbjct: 410 IPP 412


>Z83107-5|CAD92390.1|  764|Caenorhabditis elegans Hypothetical
           protein F32A7.5b protein.
          Length = 764

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
 Frame = +3

Query: 543 KVECTAPCKPSTQA-ASAYANMQPTYRPAPRAPAQSTIRTSLGARPITGQQGVAAAAASI 719
           KV+ TAP KP+  A ASA  +  P      R P   TI       P    QG A     +
Sbjct: 350 KVQGTAPSKPAPAAPASAATSPAPAPEAPRRDPNNVTIVLDDSLSPEDFNQGSAPMDIVV 409

Query: 720 RPP 728
            PP
Sbjct: 410 IPP 412


>Z83107-4|CAB05498.1|  878|Caenorhabditis elegans Hypothetical
           protein F32A7.5a protein.
          Length = 878

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
 Frame = +3

Query: 543 KVECTAPCKPSTQA-ASAYANMQPTYRPAPRAPAQSTIRTSLGARPITGQQGVAAAAASI 719
           KV+ TAP KP+  A ASA  +  P      R P   TI       P    QG A     +
Sbjct: 350 KVQGTAPSKPAPAAPASAATSPAPAPEAPRRDPNNVTIVLDDSLSPEDFNQGSAPMDIVV 409

Query: 720 RPP 728
            PP
Sbjct: 410 IPP 412


>Z36752-6|CAA85327.1|  456|Caenorhabditis elegans Hypothetical
           protein F35H8.5 protein.
          Length = 456

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = +1

Query: 127 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 240
           +G NLYV  +  ++    L   F PFG I +++++ ++
Sbjct: 126 KGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDN 163


>AC024845-3|AAF60852.1|  619|Caenorhabditis elegans Hypothetical
           protein Y65B4BL.2 protein.
          Length = 619

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +1

Query: 478 IAPSSTTLLWTAQMTQIRPTTPRWNAQPPVSL 573
           I P+STT  WT   T   P T    A+P V L
Sbjct: 127 IQPTSTTSFWTPLCTVTMPETEATRAEPDVWL 158


>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical protein
            T13H2.5a protein.
          Length = 2471

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +1

Query: 46   RAQKKAERQKEL-KRKFEQLKSERLTR 123
            RAQ+KA+ QKEL  R+ EQ + E L R
Sbjct: 1257 RAQQKAQTQKELAARQAEQARVEELAR 1283


>D10877-1|BAA01645.1|  346|Caenorhabditis elegans hnRNP like protein
           protein.
          Length = 346

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = +1

Query: 139 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRIKAR 258
           LYV  + +   ++ L + F  +GT+T ++++L+    K R
Sbjct: 116 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPR 155


>AF038613-8|AAL02515.2|  309|Caenorhabditis elegans Human hnrnp a1
           homolog protein1, isoform b protein.
          Length = 309

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = +1

Query: 139 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRIKAR 258
           LYV  + +   ++ L + F  +GT+T ++++L+    K R
Sbjct: 78  LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPR 117


>AF038613-7|ABB51185.1|  308|Caenorhabditis elegans Human hnrnp a1
           homolog protein1, isoform c protein.
          Length = 308

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = +1

Query: 139 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRIKAR 258
           LYV  + +   ++ L + F  +GT+T ++++L+    K R
Sbjct: 78  LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPR 117


>AF038613-6|ABB51186.1|  347|Caenorhabditis elegans Human hnrnp a1
           homolog protein1, isoform d protein.
          Length = 347

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = +1

Query: 139 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRIKAR 258
           LYV  + +   ++ L + F  +GT+T ++++L+    K R
Sbjct: 116 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPR 155


>AF038613-5|AAB92051.1|  346|Caenorhabditis elegans Human hnrnp a1
           homolog protein1, isoform a protein.
          Length = 346

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = +1

Query: 139 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRIKAR 258
           LYV  + +   ++ L + F  +GT+T ++++L+    K R
Sbjct: 116 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPR 155


>AC024844-6|AAK29956.1|  442|Caenorhabditis elegans Hypothetical
           protein Y65B4A.1 protein.
          Length = 442

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
 Frame = +1

Query: 46  RAQKKAERQKELKRK-------FEQLKSERLTRYQGVN-LYVKNLDDTIDDERLRKEFAP 201
           +AQK+ E +KE KRK        E  K   L     V+ +YV NL + I DE  +K  + 
Sbjct: 142 KAQKEDEEKKEKKRKKKVGLGAGEDAKEGWLDLGDKVHAVYVSNLPEDITDEEFQKFMSK 201

Query: 202 FGTI 213
            G I
Sbjct: 202 CGVI 205


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,465,789
Number of Sequences: 27780
Number of extensions: 337807
Number of successful extensions: 1420
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 1246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1413
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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