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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060057.seq
         (691 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88308-6|AAB42320.1|  180|Caenorhabditis elegans Hypothetical pr...    54   7e-08
Z68760-15|CAL44969.1|  462|Caenorhabditis elegans Hypothetical p...    30   1.8  
Z68760-13|CAD30434.1|  423|Caenorhabditis elegans Hypothetical p...    30   1.8  
Z68760-12|CAD27623.1|  436|Caenorhabditis elegans Hypothetical p...    30   1.8  
Z68760-11|CAA92997.2|  438|Caenorhabditis elegans Hypothetical p...    30   1.8  
X68070-1|CAA48207.1|  438|Caenorhabditis elegans Lin-3 protein.        30   1.8  
AL032641-9|CAL44964.1|  462|Caenorhabditis elegans Hypothetical ...    30   1.8  
AL032641-7|CAD30455.1|  423|Caenorhabditis elegans Hypothetical ...    30   1.8  
AL032641-6|CAD27613.1|  436|Caenorhabditis elegans Hypothetical ...    30   1.8  
AL032641-5|CAA21649.2|  438|Caenorhabditis elegans Hypothetical ...    30   1.8  
Z92808-1|CAB07266.2|  606|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z68159-6|CAA92287.5|  485|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr...    29   4.1  
U80445-11|AAB37801.2|  479|Caenorhabditis elegans Hypothetical p...    29   4.1  
AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical...    29   4.1  
Z83237-1|CAB05786.2|  423|Caenorhabditis elegans Hypothetical pr...    28   7.2  
U70856-2|AAB09164.1|  461|Caenorhabditis elegans Hypothetical pr...    28   7.2  
AF040659-3|AAK39392.1|  919|Caenorhabditis elegans Hypothetical ...    28   7.2  
AF040659-2|AAK39393.1|  873|Caenorhabditis elegans Hypothetical ...    28   7.2  
AF040643-1|AAB94960.1|  998|Caenorhabditis elegans Hypothetical ...    27   9.6  

>U88308-6|AAB42320.1|  180|Caenorhabditis elegans Hypothetical
           protein C32E8.3 protein.
          Length = 180

 Score = 54.4 bits (125), Expect = 7e-08
 Identities = 47/152 (30%), Positives = 68/152 (44%), Gaps = 10/152 (6%)
 Frame = +3

Query: 255 KFGDPKSDGKAITLSQSDKWMKQAKVIXGKKITTTDTAIHFKKLKSVK--LGIDDYQKFL 428
           KFG   +    +T    DKW+K A V+  K IT T T I F K+   K     D+ +K L
Sbjct: 23  KFG--AATATEMTGKNFDKWLKDAGVLDNKAITGTMTGIAFSKVTGPKKKATFDETKKVL 80

Query: 429 ----DDLAKNKKV----ELDEIKKKLTTCGQPGITHTLQNHRQPQRP*ID*QTRANILVR 584
               +D A+  K     ELD I +KL     P +    + +       +   T+     +
Sbjct: 81  AFVAEDRARQSKKPIQDELDAITEKLAKLEAPSVGGAAKANAAGVYSRLTDHTKYTGAHK 140

Query: 585 TGSAFDETGKGKGIAGRKDLVDGSGYVTGYQH 680
               FD  GKGKG +GR D  + +GYV  Y++
Sbjct: 141 --ERFDAEGKGKGKSGRADTTENTGYVGAYKN 170


>Z68760-15|CAL44969.1|  462|Caenorhabditis elegans Hypothetical
           protein F36H1.4d protein.
          Length = 462

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 17/70 (24%), Positives = 30/70 (42%)
 Frame = +3

Query: 315 MKQAKVIXGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKLTTCG 494
           ++    I  + I   DT  H+K +  V++   +Y   +D    + +    E+ K   TC 
Sbjct: 362 LRSQGTIPSRSINDDDTPKHYKSVPRVEVSAINYSGHIDFSTVSYQSTESEVSKASVTCP 421

Query: 495 QPGITHTLQN 524
            P   HT+ N
Sbjct: 422 PP--AHTVIN 429


>Z68760-13|CAD30434.1|  423|Caenorhabditis elegans Hypothetical
           protein F36H1.4c protein.
          Length = 423

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 17/70 (24%), Positives = 30/70 (42%)
 Frame = +3

Query: 315 MKQAKVIXGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKLTTCG 494
           ++    I  + I   DT  H+K +  V++   +Y   +D    + +    E+ K   TC 
Sbjct: 323 LRSQGTIPSRSINDDDTPKHYKSVPRVEVSAINYSGHIDFSTVSYQSTESEVSKASVTCP 382

Query: 495 QPGITHTLQN 524
            P   HT+ N
Sbjct: 383 PP--AHTVIN 390


>Z68760-12|CAD27623.1|  436|Caenorhabditis elegans Hypothetical
           protein F36H1.4b protein.
          Length = 436

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 17/70 (24%), Positives = 30/70 (42%)
 Frame = +3

Query: 315 MKQAKVIXGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKLTTCG 494
           ++    I  + I   DT  H+K +  V++   +Y   +D    + +    E+ K   TC 
Sbjct: 336 LRSQGTIPSRSINDDDTPKHYKSVPRVEVSAINYSGHIDFSTVSYQSTESEVSKASVTCP 395

Query: 495 QPGITHTLQN 524
            P   HT+ N
Sbjct: 396 PP--AHTVIN 403


>Z68760-11|CAA92997.2|  438|Caenorhabditis elegans Hypothetical
           protein F36H1.4a protein.
          Length = 438

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 17/70 (24%), Positives = 30/70 (42%)
 Frame = +3

Query: 315 MKQAKVIXGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKLTTCG 494
           ++    I  + I   DT  H+K +  V++   +Y   +D    + +    E+ K   TC 
Sbjct: 338 LRSQGTIPSRSINDDDTPKHYKSVPRVEVSAINYSGHIDFSTVSYQSTESEVSKASVTCP 397

Query: 495 QPGITHTLQN 524
            P   HT+ N
Sbjct: 398 PP--AHTVIN 405


>X68070-1|CAA48207.1|  438|Caenorhabditis elegans Lin-3 protein.
          Length = 438

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 17/70 (24%), Positives = 30/70 (42%)
 Frame = +3

Query: 315 MKQAKVIXGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKLTTCG 494
           ++    I  + I   DT  H+K +  V++   +Y   +D    + +    E+ K   TC 
Sbjct: 338 LRSQGTIPSRSINDDDTPKHYKSVPRVEVSAINYSGHIDFSTVSYQSTESEVSKASVTCP 397

Query: 495 QPGITHTLQN 524
            P   HT+ N
Sbjct: 398 PP--AHTVIN 405


>AL032641-9|CAL44964.1|  462|Caenorhabditis elegans Hypothetical
           protein F36H1.4d protein.
          Length = 462

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 17/70 (24%), Positives = 30/70 (42%)
 Frame = +3

Query: 315 MKQAKVIXGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKLTTCG 494
           ++    I  + I   DT  H+K +  V++   +Y   +D    + +    E+ K   TC 
Sbjct: 362 LRSQGTIPSRSINDDDTPKHYKSVPRVEVSAINYSGHIDFSTVSYQSTESEVSKASVTCP 421

Query: 495 QPGITHTLQN 524
            P   HT+ N
Sbjct: 422 PP--AHTVIN 429


>AL032641-7|CAD30455.1|  423|Caenorhabditis elegans Hypothetical
           protein F36H1.4c protein.
          Length = 423

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 17/70 (24%), Positives = 30/70 (42%)
 Frame = +3

Query: 315 MKQAKVIXGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKLTTCG 494
           ++    I  + I   DT  H+K +  V++   +Y   +D    + +    E+ K   TC 
Sbjct: 323 LRSQGTIPSRSINDDDTPKHYKSVPRVEVSAINYSGHIDFSTVSYQSTESEVSKASVTCP 382

Query: 495 QPGITHTLQN 524
            P   HT+ N
Sbjct: 383 PP--AHTVIN 390


>AL032641-6|CAD27613.1|  436|Caenorhabditis elegans Hypothetical
           protein F36H1.4b protein.
          Length = 436

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 17/70 (24%), Positives = 30/70 (42%)
 Frame = +3

Query: 315 MKQAKVIXGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKLTTCG 494
           ++    I  + I   DT  H+K +  V++   +Y   +D    + +    E+ K   TC 
Sbjct: 336 LRSQGTIPSRSINDDDTPKHYKSVPRVEVSAINYSGHIDFSTVSYQSTESEVSKASVTCP 395

Query: 495 QPGITHTLQN 524
            P   HT+ N
Sbjct: 396 PP--AHTVIN 403


>AL032641-5|CAA21649.2|  438|Caenorhabditis elegans Hypothetical
           protein F36H1.4a protein.
          Length = 438

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 17/70 (24%), Positives = 30/70 (42%)
 Frame = +3

Query: 315 MKQAKVIXGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKLTTCG 494
           ++    I  + I   DT  H+K +  V++   +Y   +D    + +    E+ K   TC 
Sbjct: 338 LRSQGTIPSRSINDDDTPKHYKSVPRVEVSAINYSGHIDFSTVSYQSTESEVSKASVTCP 397

Query: 495 QPGITHTLQN 524
            P   HT+ N
Sbjct: 398 PP--AHTVIN 405


>Z92808-1|CAB07266.2|  606|Caenorhabditis elegans Hypothetical
           protein M04C3.2 protein.
          Length = 606

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 16/71 (22%), Positives = 30/71 (42%)
 Frame = +3

Query: 264 DPKSDGKAITLSQSDKWMKQAKVIXGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAK 443
           D +    A  +   + ++KQ  +   +       +I F K+   K   +DY+K + +  K
Sbjct: 418 DDEEKSTAKLVKNIEGFLKQVTLRFPRSCKLYKISIQFTKISIFKFSANDYEKHITNAKK 477

Query: 444 NKKVELDEIKK 476
            KK     I+K
Sbjct: 478 EKKENEPNIRK 488


>Z68159-6|CAA92287.5|  485|Caenorhabditis elegans Hypothetical
           protein C33D9.6 protein.
          Length = 485

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
 Frame = +1

Query: 85  RKMSTEAQNTDAAVEQVTQEVKDVKLENGNAPGASNGTSSKSE--DNALSFKEAFK-AFS 255
           ++    A+  +  +E+   E+K++  E        N   +K E  D A  F++  K  F+
Sbjct: 290 KRQEINAEQIERLIEERNSEIKNLIREQSKEIHEKNVKIAKFEIKDYANIFRQISKNIFT 349

Query: 256 NLEIPSPMEKPSRSR 300
           N E P P  +P + R
Sbjct: 350 NKEAPGPSGRPKKRR 364


>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical
           protein F15D4.7 protein.
          Length = 2268

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 16/56 (28%), Positives = 33/56 (58%)
 Frame = +3

Query: 315 MKQAKVIXGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKL 482
           +K+ K + G++  + D  +H +KL S+     D+Q+ + DL++++ V    I KK+
Sbjct: 460 LKELKAVYGQEEDSLD--LH-EKLLSLPFDQYDWQEMIKDLSRHRSVVYQLINKKM 512


>U80445-11|AAB37801.2|  479|Caenorhabditis elegans Hypothetical
           protein C50F2.8 protein.
          Length = 479

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 13/54 (24%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
 Frame = +1

Query: 88  KMSTEAQNTDAAVEQVTQEVKDVKLENGNAPGA----SNGTSSKSEDNALSFKE 237
           ++ + A+N    +  + +++++++ +NG    A    SNGTSS ++D    F++
Sbjct: 9   QLRSNAENLSRCLHVLLEKIENIEKKNGKEQDADSTKSNGTSSSNKDGKEKFEQ 62


>AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
           protein F15D4.7 protein.
          Length = 2268

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 16/56 (28%), Positives = 33/56 (58%)
 Frame = +3

Query: 315 MKQAKVIXGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKL 482
           +K+ K + G++  + D  +H +KL S+     D+Q+ + DL++++ V    I KK+
Sbjct: 460 LKELKAVYGQEEDSLD--LH-EKLLSLPFDQYDWQEMIKDLSRHRSVVYQLINKKM 512


>Z83237-1|CAB05786.2|  423|Caenorhabditis elegans Hypothetical
           protein R06B9.1 protein.
          Length = 423

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +1

Query: 193 GTSSKSEDNALSFKEAFKAFSNLEIPSPMEKPS 291
           GT  ++E+N   F   +  F+NL I +P   PS
Sbjct: 390 GTELRAEENEKPFAPKYPVFNNLPIYNPTAPPS 422


>U70856-2|AAB09164.1|  461|Caenorhabditis elegans Hypothetical
           protein F57F4.1 protein.
          Length = 461

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -2

Query: 240 GFLER*GVILAFTGRSIGCSRRVPVLKLDVLDF 142
           GFL R  + LA+T   + C  RV V  +D ++F
Sbjct: 327 GFLMRKALELAYTNAKLYCKGRVAVRSMDHIEF 359


>AF040659-3|AAK39392.1|  919|Caenorhabditis elegans Hypothetical
           protein ZK484.4a protein.
          Length = 919

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +1

Query: 451 KWNLTKLRRS*QLAANRELLTRYKITGSRSGRRSIDRHEQIYW 579
           KW   +L+R  QL   RE L RY+     +G R+ +++ +I W
Sbjct: 724 KWTDRQLKR--QLGLTREDLNRYREAMLTTGERNRNKNVKINW 764


>AF040659-2|AAK39393.1|  873|Caenorhabditis elegans Hypothetical
           protein ZK484.4b protein.
          Length = 873

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +1

Query: 451 KWNLTKLRRS*QLAANRELLTRYKITGSRSGRRSIDRHEQIYW 579
           KW   +L+R  QL   RE L RY+     +G R+ +++ +I W
Sbjct: 678 KWTDRQLKR--QLGLTREDLNRYREAMLTTGERNRNKNVKINW 718


>AF040643-1|AAB94960.1|  998|Caenorhabditis elegans Hypothetical
           protein F14D2.6 protein.
          Length = 998

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 20/64 (31%), Positives = 28/64 (43%)
 Frame = +3

Query: 279 GKAITLSQSDKWMKQAKVIXGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVE 458
           GK++T     KW K   V+ G    + DT      LK  +LG   Y K +  L  N K+E
Sbjct: 57  GKSVTSETMKKWPKSCDVVCGNLYFSADT-----DLKVGQLG--KYFKSIRQLIGNIKIE 109

Query: 459 LDEI 470
              +
Sbjct: 110 YSSL 113


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,686,066
Number of Sequences: 27780
Number of extensions: 295885
Number of successful extensions: 1146
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1144
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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