Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021025
(730 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66513-15|CAA91337.3| 487|Caenorhabditis elegans Hypothetical p... 86 3e-17
AL110499-6|CAB57915.2| 487|Caenorhabditis elegans Hypothetical ... 86 3e-17
Z74031-12|CAE54902.1| 460|Caenorhabditis elegans Hypothetical p... 41 0.001
Z74031-11|CAD54138.1| 474|Caenorhabditis elegans Hypothetical p... 40 0.002
Z82077-5|CAB63333.1| 783|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z34802-6|CAB54282.1| 594|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z34802-5|CAA84337.1| 610|Caenorhabditis elegans Hypothetical pr... 28 7.9
>Z66513-15|CAA91337.3| 487|Caenorhabditis elegans Hypothetical
protein F54D5.12 protein.
Length = 487
Score = 85.8 bits (203), Expect = 3e-17
Identities = 38/72 (52%), Positives = 51/72 (70%)
Frame = +3
Query: 510 LVGGSVPVFDEFVLCLGLLNKIISLDEISGVLICEAGCILESLDTYVRERNLIMPLDLGA 689
LVGGS+PV DE V+ + +NK S D+ G+L C++G ILE LD + + +MP DLGA
Sbjct: 102 LVGGSIPVHDEVVISMNKINKQFSFDDTMGILKCDSGFILEDLDNKLAKLGYMMPFDLGA 161
Query: 690 KGTCQIGGNAST 725
KG+CQIGGN +T
Sbjct: 162 KGSCQIGGNIAT 173
Score = 69.7 bits (163), Expect = 2e-12
Identities = 34/80 (42%), Positives = 47/80 (58%)
Frame = +1
Query: 268 KRKQFGTVQESDINYFKSILSEERVLTDENDVLPFNIDWIKNCRGQSKVVLKPRSTEEVS 447
+ + F V +SD+ F++ L ++ V D D+ DW +G VVL P+STEEVS
Sbjct: 23 RHEGFAKVMQSDLMAFENFLGQDAVKKD--DITNHTTDWTGQFKGPGSVVLYPKSTEEVS 80
Query: 448 KIIKYCNDKHLAVCPQGGNT 507
I+ YC+ LAV PQGGNT
Sbjct: 81 AILAYCSKNKLAVVPQGGNT 100
>AL110499-6|CAB57915.2| 487|Caenorhabditis elegans Hypothetical
protein F54D5.12 protein.
Length = 487
Score = 85.8 bits (203), Expect = 3e-17
Identities = 38/72 (52%), Positives = 51/72 (70%)
Frame = +3
Query: 510 LVGGSVPVFDEFVLCLGLLNKIISLDEISGVLICEAGCILESLDTYVRERNLIMPLDLGA 689
LVGGS+PV DE V+ + +NK S D+ G+L C++G ILE LD + + +MP DLGA
Sbjct: 102 LVGGSIPVHDEVVISMNKINKQFSFDDTMGILKCDSGFILEDLDNKLAKLGYMMPFDLGA 161
Query: 690 KGTCQIGGNAST 725
KG+CQIGGN +T
Sbjct: 162 KGSCQIGGNIAT 173
Score = 69.7 bits (163), Expect = 2e-12
Identities = 34/80 (42%), Positives = 47/80 (58%)
Frame = +1
Query: 268 KRKQFGTVQESDINYFKSILSEERVLTDENDVLPFNIDWIKNCRGQSKVVLKPRSTEEVS 447
+ + F V +SD+ F++ L ++ V D D+ DW +G VVL P+STEEVS
Sbjct: 23 RHEGFAKVMQSDLMAFENFLGQDAVKKD--DITNHTTDWTGQFKGPGSVVLYPKSTEEVS 80
Query: 448 KIIKYCNDKHLAVCPQGGNT 507
I+ YC+ LAV PQGGNT
Sbjct: 81 AILAYCSKNKLAVVPQGGNT 100
>Z74031-12|CAE54902.1| 460|Caenorhabditis elegans Hypothetical
protein F32D8.12b protein.
Length = 460
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = +1
Query: 286 TVQESDINYFKSILSEERVLTDENDVLPFNIDWIKNCRGQSKVVLKPRSTEEVSKIIKYC 465
T E + + I+ V T E+ F D VVL+P + E+VS+I+K C
Sbjct: 12 TAIEKSLPDLQKIVGNSSVRTQESVRRQFARDESHFIAPPPAVVLEPTNVEQVSEILKLC 71
Query: 466 NDKHLAVCPQGG 501
ND+ + V P GG
Sbjct: 72 NDRAIPVVPFGG 83
>Z74031-11|CAD54138.1| 474|Caenorhabditis elegans Hypothetical
protein F32D8.12a protein.
Length = 474
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/74 (32%), Positives = 35/74 (47%)
Frame = +1
Query: 286 TVQESDINYFKSILSEERVLTDENDVLPFNIDWIKNCRGQSKVVLKPRSTEEVSKIIKYC 465
T E + + I+ V T E+ F D VVL+P + E+VS+I+K C
Sbjct: 12 TAIEKSLPDLQKIVGNSSVRTQESVRRQFARDESHFIAPPPAVVLEPTNVEQVSEILKLC 71
Query: 466 NDKHLAVCPQGGNT 507
ND+ + V P G T
Sbjct: 72 NDRAIPVVPFGTGT 85
>Z82077-5|CAB63333.1| 783|Caenorhabditis elegans Hypothetical
protein W09C5.7 protein.
Length = 783
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +1
Query: 331 EERVLTDENDVLPFNIDWIKNCRGQS--KVVLKPRSTEEVSKIIKYC 465
E V D+NDV F+ D ++CRG + K+ S EE K I +C
Sbjct: 344 EHCVKADDNDVTFFSFDLHQHCRGLNFQKLQTLISSMEETLKTIGFC 390
>Z34802-6|CAB54282.1| 594|Caenorhabditis elegans Hypothetical
protein M88.6b protein.
Length = 594
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/54 (24%), Positives = 25/54 (46%)
Frame = +1
Query: 289 VQESDINYFKSILSEERVLTDENDVLPFNIDWIKNCRGQSKVVLKPRSTEEVSK 450
+QE D+ F+ + E +L +END+ + K+ L+ + E + K
Sbjct: 163 IQEIDVGAFEELKKVEELLLNENDIRVLKTGTFDGMKNLKKLTLQNCNLEIIQK 216
>Z34802-5|CAA84337.1| 610|Caenorhabditis elegans Hypothetical
protein M88.6a protein.
Length = 610
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/54 (24%), Positives = 25/54 (46%)
Frame = +1
Query: 289 VQESDINYFKSILSEERVLTDENDVLPFNIDWIKNCRGQSKVVLKPRSTEEVSK 450
+QE D+ F+ + E +L +END+ + K+ L+ + E + K
Sbjct: 163 IQEIDVGAFEELKKVEELLLNENDIRVLKTGTFDGMKNLKKLTLQNCNLEIIQK 216
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,483,467
Number of Sequences: 27780
Number of extensions: 358196
Number of successful extensions: 950
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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