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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0027
         (694 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z29095-3|CAA82355.1|  161|Caenorhabditis elegans Hypothetical pr...   119   2e-27
AC024762-4|AAF59473.1|  161|Caenorhabditis elegans Vacuolar h at...   119   2e-27
AB009566-1|BAA75066.1|  161|Caenorhabditis elegans Vha3 protein ...   119   2e-27
AB000918-1|BAA22596.1|  161|Caenorhabditis elegans VHA-2 protein.     119   2e-27
Z29095-6|CAA82354.1|  169|Caenorhabditis elegans Hypothetical pr...   105   2e-23
AB000917-1|BAA22595.1|  169|Caenorhabditis elegans VHA-1 protein.     105   2e-23
Z68317-1|CAA92686.1|  214|Caenorhabditis elegans Hypothetical pr...    63   2e-10
AB000919-1|BAA22597.1|  214|Caenorhabditis elegans VHA-4 protein.      63   2e-10
AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical ...    32   0.45 
L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclas...    31   0.78 
AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical ...    31   0.78 
Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical pr...    30   1.4  
U41541-2|ABA54426.1|  526|Caenorhabditis elegans Hypothetical pr...    30   1.4  
U41541-1|ABA54425.1|  795|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z81135-4|CAB03457.1|  500|Caenorhabditis elegans Hypothetical pr...    29   2.4  
AL032634-4|CAA21599.1|  500|Caenorhabditis elegans Hypothetical ...    29   2.4  
Z68507-3|CAA92824.2| 1134|Caenorhabditis elegans Hypothetical pr...    29   3.2  
U20864-7|AAK68357.1|  859|Caenorhabditis elegans Hypothetical pr...    29   3.2  
U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z66565-6|CAA91483.1|  165|Caenorhabditis elegans Hypothetical pr...    29   4.2  
AL132860-21|CAB60518.2|  759|Caenorhabditis elegans Hypothetical...    28   5.5  
AF057032-1|AAC13567.1|  759|Caenorhabditis elegans DNA topoisome...    28   5.5  
Z79694-1|CAB01959.1|  303|Caenorhabditis elegans Hypothetical pr...    28   7.3  
AF026205-6|AAM69068.1|  908|Caenorhabditis elegans Hypothetical ...    28   7.3  
AF026205-5|AAB71258.1|  880|Caenorhabditis elegans Hypothetical ...    28   7.3  
AF026205-4|AAD47129.1|  885|Caenorhabditis elegans Hypothetical ...    28   7.3  
AF026205-3|AAB71257.1|  930|Caenorhabditis elegans Hypothetical ...    28   7.3  
Z73978-1|CAA98294.1|  236|Caenorhabditis elegans Hypothetical pr...    27   9.6  
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ...    27   9.6  

>Z29095-3|CAA82355.1|  161|Caenorhabditis elegans Hypothetical
           protein R10E11.2 protein.
          Length = 161

 Score =  119 bits (286), Expect = 2e-27
 Identities = 60/85 (70%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
 Frame = +1

Query: 10  VVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRL 186
           VVA+++ G +    A Y L KGF HL AGL  G  GL AG+AIGIVGDAGVRGTAQQPRL
Sbjct: 74  VVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRL 133

Query: 187 FVGMILILIFAEVLGLYGLIVAIYL 261
           FVGMILILIF+EVLGLYG+IVA+ L
Sbjct: 134 FVGMILILIFSEVLGLYGMIVALIL 158



 Score = 34.3 bits (75), Expect = 0.084
 Identities = 21/73 (28%), Positives = 36/73 (49%)
 Frame = +1

Query: 43  EPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAE 222
           E A Y  + G++   +       G A G A   VG   +     +P L +  ++ +I A 
Sbjct: 9   ERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMG--VMRPELIMKSVIPVIMAG 66

Query: 223 VLGLYGLIVAIYL 261
           ++G+YGL+VA+ L
Sbjct: 67  IIGIYGLVVAMVL 79


>AC024762-4|AAF59473.1|  161|Caenorhabditis elegans Vacuolar h
           atpase protein 3 protein.
          Length = 161

 Score =  119 bits (286), Expect = 2e-27
 Identities = 60/85 (70%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
 Frame = +1

Query: 10  VVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRL 186
           VVA+++ G +    A Y L KGF HL AGL  G  GL AG+AIGIVGDAGVRGTAQQPRL
Sbjct: 74  VVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRL 133

Query: 187 FVGMILILIFAEVLGLYGLIVAIYL 261
           FVGMILILIF+EVLGLYG+IVA+ L
Sbjct: 134 FVGMILILIFSEVLGLYGMIVALIL 158



 Score = 34.3 bits (75), Expect = 0.084
 Identities = 21/73 (28%), Positives = 36/73 (49%)
 Frame = +1

Query: 43  EPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAE 222
           E A Y  + G++   +       G A G A   VG   +     +P L +  ++ +I A 
Sbjct: 9   ERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMG--VMRPELIMKSVIPVIMAG 66

Query: 223 VLGLYGLIVAIYL 261
           ++G+YGL+VA+ L
Sbjct: 67  IIGIYGLVVAMVL 79


>AB009566-1|BAA75066.1|  161|Caenorhabditis elegans Vha3 protein
           protein.
          Length = 161

 Score =  119 bits (286), Expect = 2e-27
 Identities = 60/85 (70%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
 Frame = +1

Query: 10  VVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRL 186
           VVA+++ G +    A Y L KGF HL AGL  G  GL AG+AIGIVGDAGVRGTAQQPRL
Sbjct: 74  VVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRL 133

Query: 187 FVGMILILIFAEVLGLYGLIVAIYL 261
           FVGMILILIF+EVLGLYG+IVA+ L
Sbjct: 134 FVGMILILIFSEVLGLYGMIVALIL 158



 Score = 34.3 bits (75), Expect = 0.084
 Identities = 21/73 (28%), Positives = 36/73 (49%)
 Frame = +1

Query: 43  EPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAE 222
           E A Y  + G++   +       G A G A   VG   +     +P L +  ++ +I A 
Sbjct: 9   ERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMG--VMRPELIMKSVIPVIMAG 66

Query: 223 VLGLYGLIVAIYL 261
           ++G+YGL+VA+ L
Sbjct: 67  IIGIYGLVVAMVL 79


>AB000918-1|BAA22596.1|  161|Caenorhabditis elegans VHA-2 protein.
          Length = 161

 Score =  119 bits (286), Expect = 2e-27
 Identities = 60/85 (70%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
 Frame = +1

Query: 10  VVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRL 186
           VVA+++ G +    A Y L KGF HL AGL  G  GL AG+AIGIVGDAGVRGTAQQPRL
Sbjct: 74  VVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRL 133

Query: 187 FVGMILILIFAEVLGLYGLIVAIYL 261
           FVGMILILIF+EVLGLYG+IVA+ L
Sbjct: 134 FVGMILILIFSEVLGLYGMIVALIL 158



 Score = 34.3 bits (75), Expect = 0.084
 Identities = 21/73 (28%), Positives = 36/73 (49%)
 Frame = +1

Query: 43  EPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAE 222
           E A Y  + G++   +       G A G A   VG   +     +P L +  ++ +I A 
Sbjct: 9   ERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMG--VMRPELIMKSVIPVIMAG 66

Query: 223 VLGLYGLIVAIYL 261
           ++G+YGL+VA+ L
Sbjct: 67  IIGIYGLVVAMVL 79


>Z29095-6|CAA82354.1|  169|Caenorhabditis elegans Hypothetical
           protein R10E11.8 protein.
          Length = 169

 Score =  105 bits (253), Expect = 2e-23
 Identities = 52/85 (61%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
 Frame = +1

Query: 10  VVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRL 186
           VVAV+++G ++   ANY +   F     GL  G  GL AG+AIGI GDAGVR  +QQPR+
Sbjct: 82  VVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGVRALSQQPRM 141

Query: 187 FVGMILILIFAEVLGLYGLIVAIYL 261
           FVGMILILIFAEVLGLYG+IVA+ L
Sbjct: 142 FVGMILILIFAEVLGLYGMIVALIL 166


>AB000917-1|BAA22595.1|  169|Caenorhabditis elegans VHA-1 protein.
          Length = 169

 Score =  105 bits (253), Expect = 2e-23
 Identities = 52/85 (61%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
 Frame = +1

Query: 10  VVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRL 186
           VVAV+++G ++   ANY +   F     GL  G  GL AG+AIGI GDAGVR  +QQPR+
Sbjct: 82  VVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGVRALSQQPRM 141

Query: 187 FVGMILILIFAEVLGLYGLIVAIYL 261
           FVGMILILIFAEVLGLYG+IVA+ L
Sbjct: 142 FVGMILILIFAEVLGLYGMIVALIL 166


>Z68317-1|CAA92686.1|  214|Caenorhabditis elegans Hypothetical
           protein T01H3.1 protein.
          Length = 214

 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 29/65 (44%), Positives = 39/65 (60%)
 Frame = +1

Query: 61  LYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYG 240
           L  G++  G GL VG S L  G A+GIVG       A  P LFV +++I IFA  +GL+G
Sbjct: 139 LASGYMIFGGGLTVGLSNLVCGLAVGIVGSGAAIADAANPALFVKILIIEIFASAIGLFG 198

Query: 241 LIVAI 255
           +I+ I
Sbjct: 199 MIIGI 203



 Score = 40.3 bits (90), Expect = 0.001
 Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
 Frame = +1

Query: 79  HLGAGLAVGFS----GLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLI 246
           H+ AGL +GFS     L AG+ I   G + + G  + PR+    ++ +IF E + ++G+I
Sbjct: 49  HMWAGLGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGII 108

Query: 247 VA 252
           +A
Sbjct: 109 MA 110


>AB000919-1|BAA22597.1|  214|Caenorhabditis elegans VHA-4 protein.
          Length = 214

 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 29/65 (44%), Positives = 39/65 (60%)
 Frame = +1

Query: 61  LYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYG 240
           L  G++  G GL VG S L  G A+GIVG       A  P LFV +++I IFA  +GL+G
Sbjct: 139 LASGYMIFGGGLTVGLSNLVCGLAVGIVGSGAAIADAANPALFVKILIIEIFASAIGLFG 198

Query: 241 LIVAI 255
           +I+ I
Sbjct: 199 MIIGI 203



 Score = 40.3 bits (90), Expect = 0.001
 Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
 Frame = +1

Query: 79  HLGAGLAVGFS----GLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLI 246
           H+ AGL +GFS     L AG+ I   G + + G  + PR+    ++ +IF E + ++G+I
Sbjct: 49  HMWAGLGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGII 108

Query: 247 VA 252
           +A
Sbjct: 109 MA 110


>AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical
           protein T01A4.1a protein.
          Length = 1217

 Score = 31.9 bits (69), Expect = 0.45
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
 Frame = -2

Query: 261 QVDGDDKSVKTQYFSENKNKNHSDE*PR---LLSSTTHACISHDAYGETGSQTRE 106
           ++DG++   K +     K KNH+D  P    LL ST+ + ++ D    +   TR+
Sbjct: 511 ELDGEESQKKNEKKKAKKRKNHNDYLPESDPLLRSTSRSSVNSDKRSSSSGTTRK 565


>L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclase
           protein.
          Length = 1276

 Score = 31.1 bits (67), Expect = 0.78
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = -2

Query: 261 QVDGDDKSVKTQYFSENKNKNHSDE*PR---LLSSTTHACISHDAYGE 127
           ++DG++   K +     K KNH+D  P    LL ST+ + ++ D + E
Sbjct: 557 ELDGEESQKKNEKKKAKKRKNHNDYLPESDPLLRSTSRSSVNSDKFDE 604


>AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical
           protein T01A4.1c protein.
          Length = 1276

 Score = 31.1 bits (67), Expect = 0.78
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = -2

Query: 261 QVDGDDKSVKTQYFSENKNKNHSDE*PR---LLSSTTHACISHDAYGE 127
           ++DG++   K +     K KNH+D  P    LL ST+ + ++ D + E
Sbjct: 557 ELDGEESQKKNEKKKAKKRKNHNDYLPESDPLLRSTSRSSVNSDKFDE 604


>Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical protein
            ZK270.2e protein.
          Length = 4541

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = -3

Query: 416  TRVEGCSETLCKVDPLPATTIPVRVFRLR 330
            TRV   SE   +VD +PA + PV+ FRLR
Sbjct: 3603 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3631


>Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical protein
            ZK270.2d protein.
          Length = 4648

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = -3

Query: 416  TRVEGCSETLCKVDPLPATTIPVRVFRLR 330
            TRV   SE   +VD +PA + PV+ FRLR
Sbjct: 3592 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3620


>Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical protein
            ZK270.2a protein.
          Length = 4530

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = -3

Query: 416  TRVEGCSETLCKVDPLPATTIPVRVFRLR 330
            TRV   SE   +VD +PA + PV+ FRLR
Sbjct: 3592 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3620


>Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical protein
            ZK270.2e protein.
          Length = 4541

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = -3

Query: 416  TRVEGCSETLCKVDPLPATTIPVRVFRLR 330
            TRV   SE   +VD +PA + PV+ FRLR
Sbjct: 3603 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3631


>Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical protein
            ZK270.2d protein.
          Length = 4648

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = -3

Query: 416  TRVEGCSETLCKVDPLPATTIPVRVFRLR 330
            TRV   SE   +VD +PA + PV+ FRLR
Sbjct: 3592 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3620


>Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical protein
            ZK270.2a protein.
          Length = 4530

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = -3

Query: 416  TRVEGCSETLCKVDPLPATTIPVRVFRLR 330
            TRV   SE   +VD +PA + PV+ FRLR
Sbjct: 3592 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3620


>U41541-2|ABA54426.1|  526|Caenorhabditis elegans Hypothetical
           protein C41A3.2b protein.
          Length = 526

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -2

Query: 663 SQKKCSLLSPKIKHMCNKLIKYWGVIAR*HSCSI 562
           S+K  S+++ K+ H CN  + Y  V A  H C++
Sbjct: 205 SEKSASVINEKVNHNCNICVVYAPVAATTHVCTM 238


>U41541-1|ABA54425.1|  795|Caenorhabditis elegans Hypothetical
           protein C41A3.2a protein.
          Length = 795

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -2

Query: 663 SQKKCSLLSPKIKHMCNKLIKYWGVIAR*HSCSI 562
           S+K  S+++ K+ H CN  + Y  V A  H C++
Sbjct: 205 SEKSASVINEKVNHNCNICVVYAPVAATTHVCTM 238


>Z81135-4|CAB03457.1|  500|Caenorhabditis elegans Hypothetical
           protein W01G7.5 protein.
          Length = 500

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = -3

Query: 161 RTPASPTMPMAKPAARPENPTAKPAPK 81
           +TPA PT  +AKPA +P  P + PAPK
Sbjct: 47  KTPARPT--VAKPAPKP-TPKSAPAPK 70


>AL032634-4|CAA21599.1|  500|Caenorhabditis elegans Hypothetical
           protein W01G7.5 protein.
          Length = 500

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = -3

Query: 161 RTPASPTMPMAKPAARPENPTAKPAPK 81
           +TPA PT  +AKPA +P  P + PAPK
Sbjct: 47  KTPARPT--VAKPAPKP-TPKSAPAPK 70


>Z68507-3|CAA92824.2| 1134|Caenorhabditis elegans Hypothetical
           protein M18.5 protein.
          Length = 1134

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +1

Query: 352 GMVVAGSGSTLHRVSEHPSTLVYYICSLL 438
           G++V GS S L++ +++   +V Y CSLL
Sbjct: 223 GVIVLGSNSVLYKPNDNLGEVVPYTCSLL 251


>U20864-7|AAK68357.1|  859|Caenorhabditis elegans Hypothetical
           protein F32A5.2b protein.
          Length = 859

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 18/48 (37%), Positives = 21/48 (43%)
 Frame = -3

Query: 233 RPNTSAKIRIRIIPTNNLGC*AVPRTPASPTMPMAKPAARPENPTAKP 90
           RP T A  R+R  P   L     PR P   T   A P +RP   T +P
Sbjct: 82  RPATKAPNRMRRPPPRKLA--QTPRPPVVTTQRPAPPQSRPPPVTRRP 127


>U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical
           protein F32A5.2a protein.
          Length = 1000

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 18/48 (37%), Positives = 21/48 (43%)
 Frame = -3

Query: 233 RPNTSAKIRIRIIPTNNLGC*AVPRTPASPTMPMAKPAARPENPTAKP 90
           RP T A  R+R  P   L     PR P   T   A P +RP   T +P
Sbjct: 82  RPATKAPNRMRRPPPRKLA--QTPRPPVVTTQRPAPPQSRPPPVTRRP 127


>Z66565-6|CAA91483.1|  165|Caenorhabditis elegans Hypothetical
           protein T04F8.8 protein.
          Length = 165

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -3

Query: 167 VPRTPASPTMPMAKPAARPENPTAKPAPK 81
           VP  P  PT P  +P  RPE P  +P P+
Sbjct: 96  VPPPPPPPTQPEPEPEPRPE-PQPEPQPE 123


>AL132860-21|CAB60518.2|  759|Caenorhabditis elegans Hypothetical
           protein Y56A3A.27 protein.
          Length = 759

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -3

Query: 164 PRTPASPTMPMAKPAARPENPTAKPAPK 81
           P  P +P  P AKP  RP   +  PA K
Sbjct: 639 PTGPPAPPKPPAKPRGRPPRKSISPAVK 666


>AF057032-1|AAC13567.1|  759|Caenorhabditis elegans DNA
           topoisomerase III protein.
          Length = 759

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -3

Query: 164 PRTPASPTMPMAKPAARPENPTAKPAPK 81
           P  P +P  P AKP  RP   +  PA K
Sbjct: 639 PTGPPAPPKPPAKPRGRPPRKSISPAVK 666


>Z79694-1|CAB01959.1|  303|Caenorhabditis elegans Hypothetical
           protein C15A11.1 protein.
          Length = 303

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -3

Query: 164 PRTPASPTMPMAKPAARPENPTAKPAP 84
           P  P  P  P  + AA PE+P   P P
Sbjct: 187 PAGPPGPAGPAGEDAAAPESPPGPPGP 213


>AF026205-6|AAM69068.1|  908|Caenorhabditis elegans Hypothetical
           protein T23E7.2e protein.
          Length = 908

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = -3

Query: 164 PRTPASPTM--PMAKPAARPENPTAKPAPK 81
           PRTP +P +  P  +P A    P A+P P+
Sbjct: 484 PRTPKTPAVVEPEPEPVAEEPEPVAEPEPE 513


>AF026205-5|AAB71258.1|  880|Caenorhabditis elegans Hypothetical
           protein T23E7.2b protein.
          Length = 880

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = -3

Query: 164 PRTPASPTM--PMAKPAARPENPTAKPAPK 81
           PRTP +P +  P  +P A    P A+P P+
Sbjct: 434 PRTPKTPAVVEPEPEPVAEEPEPVAEPEPE 463


>AF026205-4|AAD47129.1|  885|Caenorhabditis elegans Hypothetical
           protein T23E7.2c protein.
          Length = 885

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = -3

Query: 164 PRTPASPTM--PMAKPAARPENPTAKPAPK 81
           PRTP +P +  P  +P A    P A+P P+
Sbjct: 484 PRTPKTPAVVEPEPEPVAEEPEPVAEPEPE 513


>AF026205-3|AAB71257.1|  930|Caenorhabditis elegans Hypothetical
           protein T23E7.2a protein.
          Length = 930

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = -3

Query: 164 PRTPASPTM--PMAKPAARPENPTAKPAPK 81
           PRTP +P +  P  +P A    P A+P P+
Sbjct: 484 PRTPKTPAVVEPEPEPVAEEPEPVAEPEPE 513


>Z73978-1|CAA98294.1|  236|Caenorhabditis elegans Hypothetical
           protein ZC302.3 protein.
          Length = 236

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 16/70 (22%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
 Frame = -2

Query: 240 SVKTQYFSENKNKNHSDE*PRLLSSTTHACISHDAYG--ETGSQTRESYSQTSTQVDEPF 67
           S++T+Y +   N+N S    +L+     A +  +AY       + R+   + + ++D  F
Sbjct: 154 SLQTEYLNYKANRNDSRSPSQLVKKIKDATMKAEAYEFFMDDKRVRKVIGELN-EIDSKF 212

Query: 66  VKGVVGWLLE 37
            + +  WLL+
Sbjct: 213 KENIGAWLLQ 222


>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
           protein Y40C5A.3 protein.
          Length = 2344

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
 Frame = -3

Query: 164 PRTPASPTMPMAKPAARPEN--PTAKPAPKWMNP 69
           P  PA P+MP  +  A+PE   P   P P    P
Sbjct: 562 PSEPAKPSMPSGESPAQPEPSIPAVNPEPSPSQP 595


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,516,529
Number of Sequences: 27780
Number of extensions: 410293
Number of successful extensions: 1410
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1396
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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