Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0019
(517 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 33 0.092
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 33 0.16
AL110487-16|CAH10818.1| 304|Caenorhabditis elegans Hypothetical... 33 0.16
AL110487-15|CAH10817.1| 307|Caenorhabditis elegans Hypothetical... 33 0.16
AL110487-14|CAB54432.1| 395|Caenorhabditis elegans Hypothetical... 33 0.16
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 33 0.16
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 32 0.21
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 31 0.49
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 31 0.49
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 31 0.49
Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical pr... 31 0.65
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 1.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 1.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 1.1
Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z49907-2|CAA90084.1| 324|Caenorhabditis elegans Hypothetical pr... 29 2.0
J03146-1|AAA65468.1| 324|Caenorhabditis elegans collagen protein. 29 2.0
AC006671-6|AAF39916.1| 411|Caenorhabditis elegans Hypothetical ... 29 2.0
Z81048-9|CAI79126.1| 560|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81048-8|CAB51463.1| 602|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF039570-1|AAC00000.1| 602|Caenorhabditis elegans aryl hydrocar... 29 2.6
Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z50858-2|CAD44134.1| 467|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z50858-1|CAA90721.1| 453|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 28 3.4
U97194-8|AAB52447.3| 1254|Caenorhabditis elegans Prion-like-(q/n... 28 3.4
AF408757-1|AAO27836.1| 456|Caenorhabditis elegans nucleobindin ... 28 3.4
AC006633-4|AAK68376.3| 1128|Caenorhabditis elegans Prion-like-(q... 28 3.4
Z99276-1|CAB16481.2| 1014|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z81561-3|CAB04553.2| 350|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z73428-6|CAA97810.2| 1014|Caenorhabditis elegans Hypothetical pr... 28 4.6
U97012-3|AAK39144.2| 588|Caenorhabditis elegans Groundhog (hedg... 28 4.6
L13200-7|AAA28189.1| 206|Caenorhabditis elegans Prion-like-(q/n... 28 4.6
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 28 4.6
AL032652-11|CAA21712.2| 350|Caenorhabditis elegans Hypothetical... 28 4.6
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 28 4.6
AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical ... 28 4.6
Z50176-2|CAA90539.1| 1115|Caenorhabditis elegans Hypothetical pr... 27 6.0
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 27 8.0
AL031627-24|CAA20943.2| 168|Caenorhabditis elegans Hypothetical... 27 8.0
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 27 8.0
AF047653-1|AAC04458.2| 272|Caenorhabditis elegans Hypothetical ... 27 8.0
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 33.5 bits (73), Expect = 0.092
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +1
Query: 202 RPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNGQNG 324
+P PN PS+PN+ PN G + PN G PNG NG
Sbjct: 1237 KPGPNGPNGPSDPNKPGPN-GPNEPSDPNRPG---PNGPNG 1273
Score = 33.1 bits (72), Expect = 0.12
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +1
Query: 202 RPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNGQNG 324
+P PN PS+PN+ PN G + PN G PNG NG
Sbjct: 1055 KPGPNGPNGPSDPNKPGPN-GPNEPSDPNKPG---PNGPNG 1091
Score = 33.1 bits (72), Expect = 0.12
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +1
Query: 202 RPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNGQNG 324
+P PN PS+PN+ PN G PN G PNG NG
Sbjct: 1251 KPGPNGPNEPSDPNRPGPN-GPNGPLDPNKPG---PNGPNG 1287
Score = 33.1 bits (72), Expect = 0.12
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1
Query: 202 RPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNGQN 321
+P PN PS+PN+ PN G + PN G PNG +
Sbjct: 1335 KPGPNGPNGPSDPNKPGPN-GPNEPSDPNKPGPNGPNGSS 1373
Score = 32.7 bits (71), Expect = 0.16
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +1
Query: 202 RPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNGQNG 324
+P PN PS+PN+ PN G PN G PNG NG
Sbjct: 1209 KPGPNGPNEPSDPNKPGPN-GSNGPSDPNKPG---PNGPNG 1245
Score = 32.3 bits (70), Expect = 0.21
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +1
Query: 202 RPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNGQNG 324
+P PN PS+PN+ PN G PN G PNG NG
Sbjct: 1125 KPGPNGPNEPSDPNKPGPN-GPNGPSDPNKPG---PNGPNG 1161
Score = 32.3 bits (70), Expect = 0.21
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +1
Query: 202 RPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNGQNG 324
+P PN PS+PN+ PN G PN G PNG NG
Sbjct: 1307 KPGPNGPNEPSDPNKPGPN-GPNGPSDPNKPG---PNGPNG 1343
Score = 31.1 bits (67), Expect = 0.49
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +1
Query: 202 RPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNGQN 321
+P PN PS+PN+ PN G + PN G PNG N
Sbjct: 1153 KPGPNGPNGPSDPNKPGPN-GPNESSDPNKPG---PNGPN 1188
Score = 30.7 bits (66), Expect = 0.65
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +1
Query: 202 RPPPNHEQIPSEPNQEPPN--YGEQDRFPPNHNGYRPPNGQN 321
+P PN PS+PN+ PN G D P NG P+ N
Sbjct: 1069 KPGPNGPNEPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPN 1110
Score = 30.7 bits (66), Expect = 0.65
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +1
Query: 202 RPPPNHEQIPSEPNQEPPN--YGEQDRFPPNHNGYRPPNGQN 321
+P PN PS+PN+ PN G D P NG P+ N
Sbjct: 1097 KPGPNGPNEPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPN 1138
Score = 30.7 bits (66), Expect = 0.65
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +1
Query: 202 RPPPNHEQIPSEPNQEPPN--YGEQDRFPPNHNGYRPPNGQN 321
+P PN PS+PN+ PN G D P NG P+ N
Sbjct: 1181 KPGPNGPNEPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPN 1222
Score = 30.7 bits (66), Expect = 0.65
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +1
Query: 190 VNQQRPPPNHEQIPSEPNQEPPN--YGEQDRFPPNHNGYRPPNGQN 321
++ +P PN PS+PN+ PN G D P NG P+ N
Sbjct: 1275 LDPNKPGPNGPNGPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPN 1320
Score = 29.9 bits (64), Expect = 1.1
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +1
Query: 205 PPPNHEQIPSEPNQEPPN--YGEQDRFPPNHNGYRPPNGQN 321
P PN PS+PN+ PN G D P NG P+ N
Sbjct: 1042 PSPNGPNGPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPN 1082
Score = 28.7 bits (61), Expect = 2.6
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +1
Query: 202 RPPPNHEQIPSEPNQEPPN--YGEQDRFPPNHNGYRPPN 312
+P PN PS+PN+ PN G D P NG P+
Sbjct: 1349 KPGPNGPNEPSDPNKPGPNGPNGSSDPNKPGPNGPSNPS 1387
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 202 RPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNG 315
+P P+ PS+PN+ PN G D P+ +G PNG
Sbjct: 976 KPGPSGPNGPSDPNKPSPN-GPSDPVKPSPSG-PSPNG 1011
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 32.7 bits (71), Expect = 0.16
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 181 QFGVNQQRPPPNHEQIPSEPNQEPPN 258
Q V QQ PPP +Q ++P Q+PPN
Sbjct: 254 QAPVVQQAPPPKQQQAQAQPVQQPPN 279
>AL110487-16|CAH10818.1| 304|Caenorhabditis elegans Hypothetical
protein Y39E4B.3c protein.
Length = 304
Score = 32.7 bits (71), Expect = 0.16
Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Frame = +1
Query: 178 GQFGVNQQRPPPNHEQIPSEPNQEPPNYG----EQDRFPPNHNGYRPPNG 315
G G NQ RP N P PN G Q F PN+ G+RP G
Sbjct: 75 GSGGFNQPRPNNNFNNNPQGGFHPNPNQGGFHPNQGGFHPNNGGFRPGTG 124
>AL110487-15|CAH10817.1| 307|Caenorhabditis elegans Hypothetical
protein Y39E4B.3b protein.
Length = 307
Score = 32.7 bits (71), Expect = 0.16
Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Frame = +1
Query: 178 GQFGVNQQRPPPNHEQIPSEPNQEPPNYG----EQDRFPPNHNGYRPPNG 315
G G NQ RP N P PN G Q F PN+ G+RP G
Sbjct: 75 GSGGFNQPRPNNNFNNNPQGGFHPNPNQGGFHPNQGGFHPNNGGFRPGTG 124
>AL110487-14|CAB54432.1| 395|Caenorhabditis elegans Hypothetical
protein Y39E4B.3a protein.
Length = 395
Score = 32.7 bits (71), Expect = 0.16
Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Frame = +1
Query: 178 GQFGVNQQRPPPNHEQIPSEPNQEPPNYG----EQDRFPPNHNGYRPPNG 315
G G NQ RP N P PN G Q F PN+ G+RP G
Sbjct: 75 GSGGFNQPRPNNNFNNNPQGGFHPNPNQGGFHPNQGGFHPNNGGFRPGTG 124
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 32.7 bits (71), Expect = 0.16
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Frame = +1
Query: 115 HKQVQGAVLGGLSQAFNFNVHGQFGVNQQR----PPPNHEQIPSEPNQEPPNYGEQDRFP 282
H+Q G QA +G +G Q PPP +Q P P PP + ++P
Sbjct: 177 HQQRAQQQQAGQQQAQGPPGYGPYGYAPQASTGYPPPPSQQSPYAPQAGPPPQ-MRHQYP 235
Query: 283 PNHNGYRPPNGQNGYE 330
P+ PP +GY+
Sbjct: 236 PHSQQQAPPGYWDGYQ 251
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 32.3 bits (70), Expect = 0.21
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 181 QFGVNQQRPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNGQNGYE 330
Q G Q+PPP+++Q S PN P G+Q PPN+ + Q G++
Sbjct: 2734 QQGQYSQQPPPSYQQ-SSYPNNYQP--GQQGNQPPNYQQPSHQSMQQGHQ 2780
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 31.1 bits (67), Expect = 0.49
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -3
Query: 212 GGGLC*FTPNCPCTLKLKACDSPPRTAPCTCLCTS*AP 99
G G C P C C + K C + RT CT CT P
Sbjct: 63 GCGCCCCRPRCCCCCRPKCCCTCCRTCCCTRCCTCCRP 100
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 31.1 bits (67), Expect = 0.49
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -3
Query: 212 GGGLC*FTPNCPCTLKLKACDSPPRTAPCTCLCTS*AP 99
G G C P C C + K C + RT CT CT P
Sbjct: 65 GCGCCCCRPRCCCCCRPKCCCTCCRTCCCTRCCTCCRP 102
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 31.1 bits (67), Expect = 0.49
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -3
Query: 212 GGGLC*FTPNCPCTLKLKACDSPPRTAPCTCLCTS*AP 99
G G C P C C + K C + RT CT CT P
Sbjct: 68 GCGCCCCRPRCCCCCRPKCCCTCCRTCCCTRCCTCCRP 105
>Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical
protein T07C4.9a protein.
Length = 497
Score = 30.7 bits (66), Expect = 0.65
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +1
Query: 136 VLGGLSQAFNFNVHGQFGVNQQRPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNG 315
V+ G+ + N G G N ++ P+ +Q EP+ G ++ P++ GY P
Sbjct: 7 VMSGIQDVLD-NKLGGLGGNNKQQQPSSQQSSQEPSNMNSGGGYPNQ-QPSYGGYGQPPQ 64
Query: 316 QNGY 327
Q GY
Sbjct: 65 QPGY 68
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 1.1
Identities = 21/73 (28%), Positives = 26/73 (35%), Gaps = 2/73 (2%)
Frame = +1
Query: 97 SGAHDVHKQVQGAVLGGLSQAFNFNVHGQFGVN--QQRPPPNHEQIPSEPNQEPPNYGEQ 270
+G ++ V + GG Q F Q G +Q PP P P PP G
Sbjct: 194 NGGFGGNQGVTASGFGGQQQGFGQQQQTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSG 253
Query: 271 DRFPPNHNGYRPP 309
PP G PP
Sbjct: 254 SPPPPPAAGSPPP 266
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 1.1
Identities = 21/73 (28%), Positives = 26/73 (35%), Gaps = 2/73 (2%)
Frame = +1
Query: 97 SGAHDVHKQVQGAVLGGLSQAFNFNVHGQFGVN--QQRPPPNHEQIPSEPNQEPPNYGEQ 270
+G ++ V + GG Q F Q G +Q PP P P PP G
Sbjct: 215 NGGFGGNQGVTASGFGGQQQGFGQQQQTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSG 274
Query: 271 DRFPPNHNGYRPP 309
PP G PP
Sbjct: 275 SPPPPPAAGSPPP 287
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 1.1
Identities = 21/73 (28%), Positives = 26/73 (35%), Gaps = 2/73 (2%)
Frame = +1
Query: 97 SGAHDVHKQVQGAVLGGLSQAFNFNVHGQFGVN--QQRPPPNHEQIPSEPNQEPPNYGEQ 270
+G ++ V + GG Q F Q G +Q PP P P PP G
Sbjct: 200 NGGFGGNQGVTASGFGGQQQGFGQQQQTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSG 259
Query: 271 DRFPPNHNGYRPP 309
PP G PP
Sbjct: 260 SPPPPPAAGSPPP 272
>Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical
protein F13D12.3 protein.
Length = 245
Score = 29.5 bits (63), Expect = 1.5
Identities = 26/97 (26%), Positives = 36/97 (37%), Gaps = 2/97 (2%)
Frame = +1
Query: 40 IFVLLVVSECNGGLITGILSGAHDVHKQVQGAVLGG--LSQAFNFNVHGQFGVNQQRPPP 213
IFVL+ G + GA+ GG Q N+N + Q NQQ
Sbjct: 6 IFVLIASFSIAHGFVVRTRRGAYMSSSSYSRPSYGGDQWGQNNNYNPY-QNNWNQQNQ-- 62
Query: 214 NHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNGQNG 324
N +Q + +Q +YG + P Y PP G
Sbjct: 63 NWDQYGNRGSQYGSSYGRPSSYGPPQPSYSPPKSSYG 99
>Z49907-2|CAA90084.1| 324|Caenorhabditis elegans Hypothetical
protein B0491.2 protein.
Length = 324
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +1
Query: 172 VHGQFGVNQQRPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNGQNG 324
V Q+ P P+ + PS P +PP PP N + PNG NG
Sbjct: 67 VRRQYEETNATPTPHADGSPSAPPGQPP------AVPPVFNQPKTPNGANG 111
>J03146-1|AAA65468.1| 324|Caenorhabditis elegans collagen protein.
Length = 324
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +1
Query: 172 VHGQFGVNQQRPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNGQNG 324
V Q+ P P+ + PS P +PP PP N + PNG NG
Sbjct: 67 VRRQYEETNATPTPHADGSPSAPPGQPP------AVPPVFNQPKTPNGANG 111
>AC006671-6|AAF39916.1| 411|Caenorhabditis elegans Hypothetical
protein K08A2.1 protein.
Length = 411
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 127 QGAVLGGLSQAFNFNVHGQFGVNQQRPPPNHEQIPSEPNQEPPNYG 264
QG+V G S++ N +V+G ++ QR + S+ N++ P G
Sbjct: 321 QGSVSSGTSESSNGSVYGNQSLSPQRNGKKYHPSDSKGNRKEPGKG 366
>Z81048-9|CAI79126.1| 560|Caenorhabditis elegans Hypothetical
protein C41G7.5b protein.
Length = 560
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 193 NQQRPPPNHEQIPSEPNQEPPNYGEQDRFPPNHN-GYRPP 309
N++R +HE +P+ P+ P + + F P+ N G PP
Sbjct: 418 NRRRKENSHEIVPTIPSIPIPTHFDMQMFDPSWNHGVHPP 457
>Z81048-8|CAB51463.1| 602|Caenorhabditis elegans Hypothetical
protein C41G7.5a protein.
Length = 602
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 193 NQQRPPPNHEQIPSEPNQEPPNYGEQDRFPPNHN-GYRPP 309
N++R +HE +P+ P+ P + + F P+ N G PP
Sbjct: 460 NRRRKENSHEIVPTIPSIPIPTHFDMQMFDPSWNHGVHPP 499
>AF039570-1|AAC00000.1| 602|Caenorhabditis elegans aryl hydrocarbon
receptor orthologAHR-1 protein.
Length = 602
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 193 NQQRPPPNHEQIPSEPNQEPPNYGEQDRFPPNHN-GYRPP 309
N++R +HE +P+ P+ P + + F P+ N G PP
Sbjct: 460 NRRRKENSHEIVPTIPSIPIPTHFDMQMFDPSWNHGVHPP 499
>Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical
protein C17G1.4b protein.
Length = 844
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = +1
Query: 205 PPPNHEQIPSEP-NQEPPNYGEQDRFPPNH 291
PP N P N PPNY + PPN+
Sbjct: 103 PPQNQRSGGQAPQNGPPPNYNSHQQMPPNN 132
Score = 27.1 bits (57), Expect = 8.0
Identities = 17/54 (31%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Frame = +1
Query: 160 FNFNVHGQFGVNQQRPPPNHEQIPSEPNQEPP--NYGEQDRFPPNHNGYRPPNG 315
+N +G F Q P +Q PP YG PPN G +PP G
Sbjct: 15 YNQPTNGSFNQFGQGGYPGIDQFQHPNMYAPPANGYGGMPPGPPNIGGPQPPGG 68
>Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical
protein C17G1.4a protein.
Length = 925
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = +1
Query: 205 PPPNHEQIPSEP-NQEPPNYGEQDRFPPNH 291
PP N P N PPNY + PPN+
Sbjct: 103 PPQNQRSGGQAPQNGPPPNYNSHQQMPPNN 132
Score = 27.1 bits (57), Expect = 8.0
Identities = 17/54 (31%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Frame = +1
Query: 160 FNFNVHGQFGVNQQRPPPNHEQIPSEPNQEPP--NYGEQDRFPPNHNGYRPPNG 315
+N +G F Q P +Q PP YG PPN G +PP G
Sbjct: 15 YNQPTNGSFNQFGQGGYPGIDQFQHPNMYAPPANGYGGMPPGPPNIGGPQPPGG 68
>Z50858-2|CAD44134.1| 467|Caenorhabditis elegans Hypothetical
protein F44A6.1b protein.
Length = 467
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Frame = +1
Query: 190 VNQQRPPPNHEQIP----SEPNQEPPNYGEQDRFPPNHN 294
VN PP + Q P +P Q+PP Q PP H+
Sbjct: 415 VNANPPPVQNAQPPVQQQQQPPQQPPQQPPQQNLPPVHH 453
>Z50858-1|CAA90721.1| 453|Caenorhabditis elegans Hypothetical
protein F44A6.1a protein.
Length = 453
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Frame = +1
Query: 190 VNQQRPPPNHEQIP----SEPNQEPPNYGEQDRFPPNHN 294
VN PP + Q P +P Q+PP Q PP H+
Sbjct: 401 VNANPPPVQNAQPPVQQQQQPPQQPPQQPPQQNLPPVHH 439
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +1
Query: 190 VNQQRPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNGQN 321
VN PP + + P P G + P + YRPP+G N
Sbjct: 116 VNDNGPPSSRPRKPEPPTMPRTIQGFRAPPPAATSTYRPPHGSN 159
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +1
Query: 199 QRPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGY 300
+RPPP H Q P E E Y + P N Y
Sbjct: 646 KRPPPPHRQTPHELYPEEQPYVRRPPPPQNRGNY 679
>U97194-8|AAB52447.3| 1254|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 20
protein.
Length = 1254
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +1
Query: 196 QQRPPPNHEQ--IPSEPNQEPPNYGEQDRFPP 285
Q RPPP Q IP + Q+PP +Q + PP
Sbjct: 614 QFRPPPQQSQQPIPPQQQQQPPAPPQQLQQPP 645
>AF408757-1|AAO27836.1| 456|Caenorhabditis elegans nucleobindin
protein.
Length = 456
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Frame = +1
Query: 190 VNQQRPPPNHEQIP----SEPNQEPPNYGEQDRFPPNHN 294
VN PP + Q P +P Q+PP Q PP H+
Sbjct: 404 VNANPPPVQNAQPPVQQQQQPPQQPPQQPPQQNLPPVHH 442
>AC006633-4|AAK68376.3| 1128|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 34,
isoform a protein.
Length = 1128
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = +1
Query: 166 FNVHG---QFGVNQQRPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGY 300
FN+ G Q G Q P ++P + Q+PP Q PPN N +
Sbjct: 669 FNMEGSPAQMGYIQTANKPLDMEMPMQ--QQPPQQPPQQMLPPNQNAF 714
>Z99276-1|CAB16481.2| 1014|Caenorhabditis elegans Hypothetical
protein M142.6 protein.
Length = 1014
Score = 27.9 bits (59), Expect = 4.6
Identities = 14/54 (25%), Positives = 22/54 (40%)
Frame = +1
Query: 139 LGGLSQAFNFNVHGQFGVNQQRPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGY 300
+GGL ++ +++ P N P P ++P Q PPN GY
Sbjct: 430 IGGLHPLYSQIDETGRSISRTNPKDNSHNSPQTPPKQPRQKRYQMGIPPNRMGY 483
>Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical
protein K08E3.4 protein.
Length = 643
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +1
Query: 205 PPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRP 306
P P P EP P +Y Q PP H + P
Sbjct: 478 PTPVIAPPPPEPTPAPSHYASQYDAPPVHESFEP 511
>Z81561-3|CAB04553.2| 350|Caenorhabditis elegans Hypothetical
protein Y63D3A.8 protein.
Length = 350
Score = 27.9 bits (59), Expect = 4.6
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +1
Query: 178 GQFGVNQQRPPPNHEQIPSEPNQEP-PNYGEQDRFPPN 288
GQ N + PP N + + QEP P+ + PPN
Sbjct: 65 GQEAENTENPPENEAEAGEQVEQEPEPDSRDLSAIPPN 102
>Z73428-6|CAA97810.2| 1014|Caenorhabditis elegans Hypothetical
protein M142.6 protein.
Length = 1014
Score = 27.9 bits (59), Expect = 4.6
Identities = 14/54 (25%), Positives = 22/54 (40%)
Frame = +1
Query: 139 LGGLSQAFNFNVHGQFGVNQQRPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGY 300
+GGL ++ +++ P N P P ++P Q PPN GY
Sbjct: 430 IGGLHPLYSQIDETGRSISRTNPKDNSHNSPQTPPKQPRQKRYQMGIPPNRMGY 483
>U97012-3|AAK39144.2| 588|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 9 protein.
Length = 588
Score = 27.9 bits (59), Expect = 4.6
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 6/50 (12%)
Frame = +1
Query: 196 QQRPPP---NHEQIPSEPNQEPPNYGEQDRFPPN---HNGYRPPNGQNGY 327
Q +P P N+ Q P P PP + +PP N Y+ NG N Y
Sbjct: 208 QYQPQPQTTNYNQAPQRPLYIPPPPPKLQVYPPQQLAENPYQTRNGVNNY 257
>L13200-7|AAA28189.1| 206|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 96
protein.
Length = 206
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 8/56 (14%)
Frame = +1
Query: 184 FGVNQQRPPPNHEQIPS-----EPNQEPPNYGEQ---DRFPPNHNGYRPPNGQNGY 327
+G QQ P EQ S +P Q+ P YG+Q +F + G P+ Q Y
Sbjct: 149 YGAPQQNPQQYQEQPQSYQTYQQPQQQQPQYGQQQNPQQFGQQYPGAGAPHQQQHY 204
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 27.9 bits (59), Expect = 4.6
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +1
Query: 205 PPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNGQNG 324
PPP P P Q+P YG+ PP H Y+P Q G
Sbjct: 736 PPPQ----PGHPYQQP--YGQMP--PPPHGQYQPQQQQGG 767
>AL032652-11|CAA21712.2| 350|Caenorhabditis elegans Hypothetical
protein Y63D3A.8 protein.
Length = 350
Score = 27.9 bits (59), Expect = 4.6
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +1
Query: 178 GQFGVNQQRPPPNHEQIPSEPNQEP-PNYGEQDRFPPN 288
GQ N + PP N + + QEP P+ + PPN
Sbjct: 65 GQEAENTENPPENEAEAGEQVEQEPEPDSRDLSAIPPN 102
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 27.9 bits (59), Expect = 4.6
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +1
Query: 205 PPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNGQNG 324
PPP P P Q+P YG+ PP H Y+P Q G
Sbjct: 736 PPPQ----PGHPYQQP--YGQMP--PPPHGQYQPQQQQGG 767
>AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical
protein ZK973.9 protein.
Length = 233
Score = 27.9 bits (59), Expect = 4.6
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +1
Query: 172 VHGQFGVNQQRPPPNHEQIPSE-PNQEPPNYGEQDRFPPN-HNGYRPPNGQNGY 327
V+ FG Q P + +++P P Q P Y PP+ + GY PP Q GY
Sbjct: 180 VYPPFG--QPAPQMSGQRMPYPYPPQGMPGYPGGPPPPPHGYEGYPPPGAQPGY 231
>Z50176-2|CAA90539.1| 1115|Caenorhabditis elegans Hypothetical protein
C09G1.2 protein.
Length = 1115
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = +1
Query: 145 GLSQAFNFNVHGQFGVNQ-QRPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNG 315
G S + NVH +N+ +R PP Q P EP + EQ+ P P G
Sbjct: 1034 GQSSLGSNNVHMNENLNEVRRAPPEQPQEPDEPEESE----EQEPVRPEQQNIEIPEG 1087
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = +1
Query: 175 HGQFGVNQQRPPP--NHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNG 315
H N PPP +H Q P P E G + + PP + PP G
Sbjct: 68 HHSVPPNSFAPPPGQHHPQHPGMPPMEWRPPGAEYQMPPGYPAGYPPYG 116
>AL031627-24|CAA20943.2| 168|Caenorhabditis elegans Hypothetical
protein Y102A5C.2 protein.
Length = 168
Score = 27.1 bits (57), Expect = 8.0
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 208 PPNHEQIPSEPNQEPPNYGEQ 270
PPN + + +EP+ E P + E+
Sbjct: 133 PPNRQNVEAEPDAEQPQFDEE 153
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +1
Query: 205 PPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRP 306
PPP E P EP EP E PP RP
Sbjct: 549 PPPPREPTPREPTPEPEPVREPTPPPPPPAKPRP 582
>AF047653-1|AAC04458.2| 272|Caenorhabditis elegans Hypothetical
protein W02F12.2 protein.
Length = 272
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = -2
Query: 273 ILLPIIWWFLIRFARYLFMVWWWSLLIHAKLS 178
+ +P++ WF +F++ L +V W L++ A +S
Sbjct: 108 VYIPVMKWFPEKFSKRLTLVRWVVLIVTALVS 139
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,691,323
Number of Sequences: 27780
Number of extensions: 219900
Number of successful extensions: 902
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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