Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0013
(472 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC087079-3|AAK27862.1| 82|Caenorhabditis elegans Hypothetical ... 51 4e-07
Z81115-5|CAB03295.1| 482|Caenorhabditis elegans Hypothetical pr... 31 0.55
AL033514-7|CAA22114.1| 648|Caenorhabditis elegans Hypothetical ... 30 0.96
Z48006-3|CAB62803.1| 449|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z48006-2|CAA88050.1| 495|Caenorhabditis elegans Hypothetical pr... 29 1.7
U40413-6|AAK39173.2| 356|Caenorhabditis elegans Hypothetical pr... 28 2.9
AF149288-1|AAF99087.1| 644|Caenorhabditis elegans KRP85 protein. 27 6.8
AF003390-2|AAP31432.1| 341|Caenorhabditis elegans Hypothetical ... 27 6.8
AF003390-1|AAB54271.2| 473|Caenorhabditis elegans Hypothetical ... 27 6.8
AC024801-1|AAK68513.1| 646|Caenorhabditis elegans Kinesin-like ... 27 6.8
Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical pr... 27 9.0
U41545-3|ABN43093.1| 152|Caenorhabditis elegans Hypothetical pr... 27 9.0
U13875-8|AAN63443.1| 633|Caenorhabditis elegans Hypothetical pr... 27 9.0
U13875-7|AAN63444.1| 635|Caenorhabditis elegans Hypothetical pr... 27 9.0
DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein. 27 9.0
>AC087079-3|AAK27862.1| 82|Caenorhabditis elegans Hypothetical
protein Y37E3.4 protein.
Length = 82
Score = 51.2 bits (117), Expect = 4e-07
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 3/46 (6%)
Frame = +1
Query: 169 MTRGNQRDLARAKNQKKQVEMQKKKNASEK---TGLSLQERKHRDA 297
MTRGNQRDLAR KNQKK + +K++ AS + GLS+ R +RDA
Sbjct: 1 MTRGNQRDLAREKNQKKLADQKKRQGASGQDGNAGLSMDARMNRDA 46
>Z81115-5|CAB03295.1| 482|Caenorhabditis elegans Hypothetical
protein T05D4.5 protein.
Length = 482
Score = 30.7 bits (66), Expect = 0.55
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +1
Query: 184 QRDLARAKNQKKQVEMQKKKNASEKTGLSLQERKHRDA 297
+RD R K +K+ E +KKK+A EK +E+K +DA
Sbjct: 393 ERDERRTK--RKEEEEKKKKDAEEKKKKDAEEKKKKDA 428
Score = 29.9 bits (64), Expect = 0.96
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 163 IRMTRGNQRDLARAKNQKKQ--VEMQKKKNASEKTGLSLQERKHRDA 297
++M R +R + + +KK+ E +KKK+A EK ++ K +DA
Sbjct: 390 LKMERDERRTKRKEEEEKKKKDAEEKKKKDAEEKKKKDAEDEKKKDA 436
>AL033514-7|CAA22114.1| 648|Caenorhabditis elegans Hypothetical
protein Y75B8A.7 protein.
Length = 648
Score = 29.9 bits (64), Expect = 0.96
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +1
Query: 172 TRGNQRDLARAKNQKKQVEMQKKKNASEKTGLSLQERKHR 291
+R + + +KK++E KK+ A +K LSL + K++
Sbjct: 246 SRETVAETEKMNGEKKKIEKDKKRKAGDKADLSLDDGKNK 285
>Z48006-3|CAB62803.1| 449|Caenorhabditis elegans Hypothetical
protein F19C6.2b protein.
Length = 449
Score = 29.1 bits (62), Expect = 1.7
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 178 GNQRDLARAKNQKKQVEMQKKKNASEK 258
GN+ D + AK KKQV +KK+NA K
Sbjct: 301 GNEDDSSNAKYAKKQVFKKKKRNAFGK 327
>Z48006-2|CAA88050.1| 495|Caenorhabditis elegans Hypothetical
protein F19C6.2a protein.
Length = 495
Score = 29.1 bits (62), Expect = 1.7
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 178 GNQRDLARAKNQKKQVEMQKKKNASEK 258
GN+ D + AK KKQV +KK+NA K
Sbjct: 347 GNEDDSSNAKYAKKQVFKKKKRNAFGK 373
>U40413-6|AAK39173.2| 356|Caenorhabditis elegans Hypothetical
protein C18B2.2 protein.
Length = 356
Score = 28.3 bits (60), Expect = 2.9
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 163 IRMTRGNQRDLARAKNQKKQVE-MQKKKNASEKTGLSL 273
+ M+ ++ L R N + ++ +QKK NASE TG SL
Sbjct: 148 MNMSEWDKESLCRGDNTFRHLKSLQKKYNASEMTGWSL 185
>AF149288-1|AAF99087.1| 644|Caenorhabditis elegans KRP85 protein.
Length = 644
Score = 27.1 bits (57), Expect = 6.8
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 181 NQRDLARAKNQKKQVEMQKKKNASEK 258
NQ + AK Q+++VEM+KK+ E+
Sbjct: 368 NQEEAWEAKMQEREVEMEKKRKILEE 393
>AF003390-2|AAP31432.1| 341|Caenorhabditis elegans Hypothetical
protein R155.1b protein.
Length = 341
Score = 27.1 bits (57), Expect = 6.8
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = -1
Query: 301 IQHPCVFFLVGINQSFHWHFSFFAFLLVSFGFWRGPSPSDYHESF 167
I P ++ + S+ F+F F L+ +W GP S Y F
Sbjct: 260 ISRPFIWIFGKLTISYSMGFAFLMFGLIKTKYWIGPVKSLYFIGF 304
>AF003390-1|AAB54271.2| 473|Caenorhabditis elegans Hypothetical
protein R155.1a protein.
Length = 473
Score = 27.1 bits (57), Expect = 6.8
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = -1
Query: 301 IQHPCVFFLVGINQSFHWHFSFFAFLLVSFGFWRGPSPSDYHESF 167
I P ++ + S+ F+F F L+ +W GP S Y F
Sbjct: 392 ISRPFIWIFGKLTISYSMGFAFLMFGLIKTKYWIGPVKSLYFIGF 436
>AC024801-1|AAK68513.1| 646|Caenorhabditis elegans Kinesin-like
protein protein 20 protein.
Length = 646
Score = 27.1 bits (57), Expect = 6.8
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 181 NQRDLARAKNQKKQVEMQKKKNASEK 258
NQ + AK Q+++VEM+KK+ E+
Sbjct: 370 NQEEAWEAKMQEREVEMEKKRKILEE 395
>Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 82 ASPVET*DNAPPSISPIGVKLEKKLLA 2
+SP PPSISP G+KL ++ A
Sbjct: 1295 SSPENKSSEVPPSISPSGIKLAGEVTA 1321
>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 82 ASPVET*DNAPPSISPIGVKLEKKLLA 2
+SP PPSISP G+KL ++ A
Sbjct: 1317 SSPENKSSEVPPSISPSGIKLAGEVTA 1343
>Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 82 ASPVET*DNAPPSISPIGVKLEKKLLA 2
+SP PPSISP G+KL ++ A
Sbjct: 1108 SSPENKSSEVPPSISPSGIKLAGEVTA 1134
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 82 ASPVET*DNAPPSISPIGVKLEKKLLA 2
+SP PPSISP G+KL ++ A
Sbjct: 1415 SSPENKSSEVPPSISPSGIKLAGEVTA 1441
>Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 82 ASPVET*DNAPPSISPIGVKLEKKLLA 2
+SP PPSISP G+KL ++ A
Sbjct: 1295 SSPENKSSEVPPSISPSGIKLAGEVTA 1321
>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 82 ASPVET*DNAPPSISPIGVKLEKKLLA 2
+SP PPSISP G+KL ++ A
Sbjct: 1317 SSPENKSSEVPPSISPSGIKLAGEVTA 1343
>Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 82 ASPVET*DNAPPSISPIGVKLEKKLLA 2
+SP PPSISP G+KL ++ A
Sbjct: 1108 SSPENKSSEVPPSISPSGIKLAGEVTA 1134
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 82 ASPVET*DNAPPSISPIGVKLEKKLLA 2
+SP PPSISP G+KL ++ A
Sbjct: 1415 SSPENKSSEVPPSISPSGIKLAGEVTA 1441
>Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical protein
C52A11.4c protein.
Length = 2202
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 82 ASPVET*DNAPPSISPIGVKLEKKLLA 2
+SP PPSISP G+KL ++ A
Sbjct: 1126 SSPENKSSEVPPSISPSGIKLAGEVTA 1152
>U41545-3|ABN43093.1| 152|Caenorhabditis elegans Hypothetical
protein C02F12.10 protein.
Length = 152
Score = 26.6 bits (56), Expect = 9.0
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +3
Query: 216 ETSRNAKKEKCQ*KDWFIPTRKKTQGC*INARKTTKKRGRVSSKETS*ASSKLISYLR 389
E ++ + +CQ K WF R K + C RK+ K+ S SS+ + L+
Sbjct: 73 ELAQTIELTECQVKTWFQNRRTKKRRCTSPLRKSMMKKSDERSPSPQNPSSQHVQNLQ 130
>U13875-8|AAN63443.1| 633|Caenorhabditis elegans Hypothetical
protein C26E6.7a protein.
Length = 633
Score = 26.6 bits (56), Expect = 9.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 211 QKKQVEMQKKKNASEKTGLSLQERKHR 291
Q KQ+E Q++ TG +LQE+K +
Sbjct: 204 QFKQIEKQRQTKLHSYTGTTLQEKKRK 230
>U13875-7|AAN63444.1| 635|Caenorhabditis elegans Hypothetical
protein C26E6.7b protein.
Length = 635
Score = 26.6 bits (56), Expect = 9.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 211 QKKQVEMQKKKNASEKTGLSLQERKHR 291
Q KQ+E Q++ TG +LQE+K +
Sbjct: 206 QFKQIEKQRQTKLHSYTGTTLQEKKRK 232
>DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.
Length = 2166
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 82 ASPVET*DNAPPSISPIGVKLEKKLLA 2
+SP PPSISP G+KL ++ A
Sbjct: 1086 SSPENKSSEVPPSISPSGIKLAGEVTA 1112
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,487,611
Number of Sequences: 27780
Number of extensions: 138546
Number of successful extensions: 428
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 425
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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