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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_A18
         (961 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X59589-1|CAA42159.1|  395|Caenorhabditis elegans calreticulin pr...   186   2e-47
AF125963-7|AAD14746.1|  395|Caenorhabditis elegans Calreticulin ...   186   2e-47
Z22181-5|CAA80183.1|  619|Caenorhabditis elegans Hypothetical pr...    76   3e-14
Z74472-4|CAA98942.1|  301|Caenorhabditis elegans Hypothetical pr...    30   2.1  
V00147-1|CAA23463.1|  296|Caenorhabditis elegans protein ( Caeno...    30   2.1  
J01047-1|AAA27988.1|  296|Caenorhabditis elegans protein ( C.ele...    30   2.1  
Z29094-14|CAJ43434.1|  893|Caenorhabditis elegans Hypothetical p...    28   8.6  
Z29094-10|CAD45580.2|  965|Caenorhabditis elegans Hypothetical p...    28   8.6  
Z29094-9|CAA82347.3|  960|Caenorhabditis elegans Hypothetical pr...    28   8.6  
AY450852-1|AAR18092.1|  960|Caenorhabditis elegans Tousled-like ...    28   8.6  

>X59589-1|CAA42159.1|  395|Caenorhabditis elegans calreticulin
           protein.
          Length = 395

 Score =  186 bits (453), Expect = 2e-47
 Identities = 83/145 (57%), Positives = 110/145 (75%), Gaps = 1/145 (0%)
 Frame = +1

Query: 139 INCDVFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYA 318
           ++ +V+F+E+F D SWE  WV S+H   +FG FKL+AGKFF     D+G++TS+DA+FY+
Sbjct: 13  VSAEVYFKEEFNDASWEKRWVQSKHKD-DFGAFKLSAGKFFDVESRDQGIQTSQDAKFYS 71

Query: 319 LSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPD 495
            + KF K FSN+GK LV+Q+TVKHEQ IDCGGGY+KV     +  D HGETPY +MFGPD
Sbjct: 72  RAAKFDKDFSNKGKTLVIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMFGPD 131

Query: 496 ICGPGTKKVHVIFSYKGKNXLXSKK 570
           ICGP T++VHVI +YKG+N L  K+
Sbjct: 132 ICGP-TRRVHVILNYKGENKLIKKE 155



 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 29/78 (37%), Positives = 31/78 (39%)
 Frame = +2

Query: 710 LPPXKIXDP*SPXTXXTXDDXPLFXTPXTXXPEDWDKPEXXPXPXAPXPEXWDXXNXXXX 889
           LP  KI DP         D+           PEDW+KPE  P P A  PE WD       
Sbjct: 198 LPAKKIKDP-DAKKPEDWDEREYIDDAEDAKPEDWEKPEHIPDPDAKKPEDWD-DEMDGE 255

Query: 890 GTPPXIXPPXXKGLXGPK 943
             PP I  P  KG   PK
Sbjct: 256 WEPPMIDNPEYKGEWKPK 273


>AF125963-7|AAD14746.1|  395|Caenorhabditis elegans Calreticulin
           protein 1 protein.
          Length = 395

 Score =  186 bits (453), Expect = 2e-47
 Identities = 83/145 (57%), Positives = 110/145 (75%), Gaps = 1/145 (0%)
 Frame = +1

Query: 139 INCDVFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYA 318
           ++ +V+F+E+F D SWE  WV S+H   +FG FKL+AGKFF     D+G++TS+DA+FY+
Sbjct: 13  VSAEVYFKEEFNDASWEKRWVQSKHKD-DFGAFKLSAGKFFDVESRDQGIQTSQDAKFYS 71

Query: 319 LSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPD 495
            + KF K FSN+GK LV+Q+TVKHEQ IDCGGGY+KV     +  D HGETPY +MFGPD
Sbjct: 72  RAAKFDKDFSNKGKTLVIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMFGPD 131

Query: 496 ICGPGTKKVHVIFSYKGKNXLXSKK 570
           ICGP T++VHVI +YKG+N L  K+
Sbjct: 132 ICGP-TRRVHVILNYKGENKLIKKE 155



 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 29/78 (37%), Positives = 31/78 (39%)
 Frame = +2

Query: 710 LPPXKIXDP*SPXTXXTXDDXPLFXTPXTXXPEDWDKPEXXPXPXAPXPEXWDXXNXXXX 889
           LP  KI DP         D+           PEDW+KPE  P P A  PE WD       
Sbjct: 198 LPAKKIKDP-DAKKPEDWDEREYIDDAEDAKPEDWEKPEHIPDPDAKKPEDWD-DEMDGE 255

Query: 890 GTPPXIXPPXXKGLXGPK 943
             PP I  P  KG   PK
Sbjct: 256 WEPPMIDNPEYKGEWKPK 273


>Z22181-5|CAA80183.1|  619|Caenorhabditis elegans Hypothetical
           protein ZK632.6 protein.
          Length = 619

 Score = 76.2 bits (179), Expect = 3e-14
 Identities = 40/94 (42%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
 Frame = +1

Query: 271 EDDKGLKTSEDARFYALSRKFK-PFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFD--CKL 441
           E D GL     AR +A++ K   PF+ +    VVQ+ +K E+  +CGGGYLK+     + 
Sbjct: 107 EGDLGLIVKTKARHHAIAAKLNTPFAFDANTFVVQYDIKFEEGQECGGGYLKLLSEGAEK 166

Query: 442 EQKDMHGETPYEIMFGPDICGPGTKKVHVIFSYK 543
           +  +   +T Y IMFGPD CG  T KVH+IF YK
Sbjct: 167 DLANFQDKTAYTIMFGPDKCG-ATGKVHLIFRYK 199


>Z74472-4|CAA98942.1|  301|Caenorhabditis elegans Hypothetical
           protein F23H12.4 protein.
          Length = 301

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 22/85 (25%), Positives = 25/85 (29%)
 Frame = +2

Query: 686 PKRXTGTSLPPXKIXDP*SPXTXXTXDDXPLFXTPXTXXPEDWDKPEXXPXPXAPXPEXW 865
           P    G    P K   P +P T  T    P+     T  P     P+  P P  P     
Sbjct: 106 PPGPAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPG 165

Query: 866 DXXNXXXXGTPPXIXPPXXKGLXGP 940
           D       G P     P   G  GP
Sbjct: 166 DPGEAGTPGRPGTDAAPGSPGPRGP 190


>V00147-1|CAA23463.1|  296|Caenorhabditis elegans protein (
           Caenorhabditis elegansgene Col-1 coding for a collagen.
           ).
          Length = 296

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 22/85 (25%), Positives = 25/85 (29%)
 Frame = +2

Query: 686 PKRXTGTSLPPXKIXDP*SPXTXXTXDDXPLFXTPXTXXPEDWDKPEXXPXPXAPXPEXW 865
           P    G    P K   P +P T  T    P+     T  P     P+  P P  P     
Sbjct: 101 PPGPAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPG 160

Query: 866 DXXNXXXXGTPPXIXPPXXKGLXGP 940
           D       G P     P   G  GP
Sbjct: 161 DPGEAGTPGRPGTDAAPGSPGPRGP 185


>J01047-1|AAA27988.1|  296|Caenorhabditis elegans protein (
           C.elegans (nematode)collagen 1 (col-1) gene, complete
           cds. ).
          Length = 296

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 22/85 (25%), Positives = 25/85 (29%)
 Frame = +2

Query: 686 PKRXTGTSLPPXKIXDP*SPXTXXTXDDXPLFXTPXTXXPEDWDKPEXXPXPXAPXPEXW 865
           P    G    P K   P +P T  T    P+     T  P     P+  P P  P     
Sbjct: 101 PPGPAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPG 160

Query: 866 DXXNXXXXGTPPXIXPPXXKGLXGP 940
           D       G P     P   G  GP
Sbjct: 161 DPGEAGTPGRPGTDAAPGSPGPRGP 185


>Z29094-14|CAJ43434.1|  893|Caenorhabditis elegans Hypothetical
           protein C07A9.3c protein.
          Length = 893

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 20/75 (26%), Positives = 28/75 (37%)
 Frame = -3

Query: 275 SSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQFIEDNASKLTTTSTTA 96
           + GS K  PAV  N  NS+       Q+  HE   ++    T     +N    T T    
Sbjct: 254 NQGSPKRQPAVQQNGSNSYDSQQQQPQMNQHEMQNSYWGVATPSLGVNNRGTPTPTQQQH 313

Query: 95  FIFDSQYHLLQQKTG 51
           +  DS  +  Q   G
Sbjct: 314 YSSDSNSNSNQSPPG 328


>Z29094-10|CAD45580.2|  965|Caenorhabditis elegans Hypothetical
           protein C07A9.3b protein.
          Length = 965

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 20/75 (26%), Positives = 28/75 (37%)
 Frame = -3

Query: 275 SSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQFIEDNASKLTTTSTTA 96
           + GS K  PAV  N  NS+       Q+  HE   ++    T     +N    T T    
Sbjct: 321 NQGSPKRQPAVQQNGSNSYDSQQQQPQMNQHEMQNSYWGVATPSLGVNNRGTPTPTQQQH 380

Query: 95  FIFDSQYHLLQQKTG 51
           +  DS  +  Q   G
Sbjct: 381 YSSDSNSNSNQSPPG 395


>Z29094-9|CAA82347.3|  960|Caenorhabditis elegans Hypothetical
           protein C07A9.3a protein.
          Length = 960

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 20/75 (26%), Positives = 28/75 (37%)
 Frame = -3

Query: 275 SSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQFIEDNASKLTTTSTTA 96
           + GS K  PAV  N  NS+       Q+  HE   ++    T     +N    T T    
Sbjct: 321 NQGSPKRQPAVQQNGSNSYDSQQQQPQMNQHEMQNSYWGVATPSLGVNNRGTPTPTQQQH 380

Query: 95  FIFDSQYHLLQQKTG 51
           +  DS  +  Q   G
Sbjct: 381 YSSDSNSNSNQSPPG 395


>AY450852-1|AAR18092.1|  960|Caenorhabditis elegans Tousled-like
           kinase protein.
          Length = 960

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 20/75 (26%), Positives = 28/75 (37%)
 Frame = -3

Query: 275 SSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQFIEDNASKLTTTSTTA 96
           + GS K  PAV  N  NS+       Q+  HE   ++    T     +N    T T    
Sbjct: 321 NQGSPKRQPAVQQNGSNSYDSQQQQPQMNQHEMQNSYWGVATPSLGVNNRGTPTPTQQQH 380

Query: 95  FIFDSQYHLLQQKTG 51
           +  DS  +  Q   G
Sbjct: 381 YSSDSNSNSNQSPPG 395


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,980,305
Number of Sequences: 27780
Number of extensions: 388600
Number of successful extensions: 1110
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1100
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2496624284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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