Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_A14
(545 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical... 62 3e-10
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 51 5e-07
U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical pr... 41 5e-04
AF016449-14|AAG23991.1| 517|Caenorhabditis elegans Hypothetical... 41 5e-04
U58758-13|AAB93427.1| 565|Caenorhabditis elegans Hypothetical p... 41 7e-04
U41625-5|AAA83327.1| 700|Caenorhabditis elegans Suppressor of a... 40 0.001
AY091467-1|AAM44123.1| 700|Caenorhabditis elegans SUR-5 protein. 40 0.001
U23521-8|AAC46810.4| 505|Caenorhabditis elegans Hypothetical pr... 38 0.006
U88308-1|AAB42324.2| 461|Caenorhabditis elegans Hypothetical pr... 36 0.014
Z70684-10|CAA94602.2| 684|Caenorhabditis elegans Hypothetical p... 35 0.044
Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr... 34 0.058
Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical pr... 34 0.058
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr... 34 0.058
Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical pr... 34 0.058
U39655-3|AAA80409.2| 718|Caenorhabditis elegans Fatty acid coa ... 33 0.13
AF016686-12|AAB66234.1| 723|Caenorhabditis elegans Hypothetical... 32 0.31
Z70751-1|CAA94751.1| 544|Caenorhabditis elegans Hypothetical pr... 31 0.41
U97550-5|AAK18982.2| 497|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucle... 28 3.8
AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila so... 28 3.8
U21310-1|AAA62519.1| 997|Caenorhabditis elegans Hypothetical pr... 28 5.0
AF003136-7|ABE73336.1| 1539|Caenorhabditis elegans Hypothetical ... 27 8.8
>AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical
protein Y66D12A.14 protein.
Length = 2870
Score = 61.7 bits (143), Expect = 3e-10
Identities = 41/161 (25%), Positives = 79/161 (49%), Gaps = 1/161 (0%)
Frame = +3
Query: 66 LDENMRCVREGEPGEVCVAGFNLARGYVRGKDPHRFIHNPHNTHPNFAKLYRTGDFGILD 245
++ +R V + GE+ ++G + RGY+ K+ ++ Y +GD ++
Sbjct: 2423 VNSKIRIVEGEDQGELLISGLGIMRGYLNRKE---------------SQWYASGDVCRIE 2467
Query: 246 KGVILYAGRADSQVKIRGHRVDLQEVDHAVSTIPCVDNCVVLCYGVESSNPEILAFVTIN 425
KGV+ + GR D+Q+KIRG+RV+L E++ + + + +C L + + +I F T
Sbjct: 2468 KGVVEFVGRTDTQIKIRGYRVELTEIEKTIESRNGIASCKAL---FDKESQQIHVFYTGE 2524
Query: 426 PEARMSAKNIEAELTSSLTDYMIPQVIE-IETVPVLVNGKV 545
E ++S+ + L + IP I+ P+ N K+
Sbjct: 2525 LE-KLSSNDAREHCERYLEPHKIPSTFNGIDKFPLTGNSKI 2564
Score = 55.2 bits (127), Expect = 3e-08
Identities = 31/101 (30%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Frame = +3
Query: 246 KGVILYAGRADSQVKIRGHRVDLQEVDHAVSTIPCVDNCVVLCYGVESSNPEILAFVTIN 425
+G +++ GR DSQVK+RGHR+DL E++ A + +D+C C E+ + N
Sbjct: 1097 QGGLIFMGRKDSQVKVRGHRIDLFEIECAALSSNLIDSC--SCVVGENCQLVLFFKENEN 1154
Query: 426 PEARMSAKNIEAELTSSLTDYMIP-QVIEIETVPVLVNGKV 545
P+ + KN L L Y +P +++ +++ P+ GK+
Sbjct: 1155 PDTQEKLKN---HLEKELIAYKVPSRLVGLDSFPLTRTGKI 1192
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
C41A3.1 protein.
Length = 7829
Score = 51.2 bits (117), Expect = 5e-07
Identities = 44/149 (29%), Positives = 76/149 (51%), Gaps = 2/149 (1%)
Frame = +3
Query: 105 GEVCVAGFNLARGYVRGKDPHRFIHNPHNTHPNFAKLYRTGDFGILDKGVILYAGRADSQ 284
G V V G +LARGY+ PH T F+ +Y TGD + Y GR DSQ
Sbjct: 7356 GNVQVKGISLARGYITSA--------PHGTP--FSDIYSTGDIVDSKLNSLQYIGRMDSQ 7405
Query: 285 VKIRGHRVDLQEVDHAVSTIPCVDNCVVLCYGVESSNPEILAFVTINPEARMSAKNIEAE 464
VK +G R+++ E++ + I C+ +L V SN ++AF+ ++ ++++ ++
Sbjct: 7406 VKCKGVRINISEIEKEL--ILCLG---LLQIVVLYSNQMLIAFI-VDQKSKLLHDSLVKT 7459
Query: 465 L--TSSLTDYMIPQVIEIETVPVLVNGKV 545
L + + DY ++I +P+ +GKV
Sbjct: 7460 LKNRTQIPDYF----VQINKMPLNSSGKV 7484
>U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical
protein F37C12.7 protein.
Length = 731
Score = 41.1 bits (92), Expect = 5e-04
Identities = 42/127 (33%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Frame = +3
Query: 105 GEVCVAGFNLARGYVRGKDPHRFIHNPHNTHPNFAKLY-RTGDFGIL-DKGVILYAGRAD 278
GE+ ++G N++ GY K P + + T+ K+Y TGD G D G +L R
Sbjct: 534 GEILISGENISPGYY--KQPEKTAED-FITYKG--KVYFATGDIGQKRDDGSLLIIDRKK 588
Query: 279 SQVKIR-GHRVDLQEVDHAVSTIPCVDNCVVLCYGVESSNPEILAFVTINPEARMSAKNI 455
VK++ G V L +V+ A+ P VDN V G+E S ++A V P + K
Sbjct: 589 DLVKLQHGEYVSLAKVECALLNCPIVDNICVYGSGMEDS---VVALVV--PNQKHLEKIA 643
Query: 456 EAELTSS 476
EAE S+
Sbjct: 644 EAEGVST 650
>AF016449-14|AAG23991.1| 517|Caenorhabditis elegans Hypothetical
protein C50H11.1 protein.
Length = 517
Score = 41.1 bits (92), Expect = 5e-04
Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 8/123 (6%)
Frame = +3
Query: 180 NPHNTHPNFAK--LYRTGDFGILDK-GVILYAGRADSQVKIRGHRVDLQEVDHAVSTIPC 350
NP T F + ++TGD G LDK G + GR+ + G + +E++ A+ +I
Sbjct: 375 NPEKTKEEFTEDGWFKTGDVGSLDKDGYLTIGGRSKDMIISGGENIYPKEIEDAIDSIEF 434
Query: 351 VDNCVVLCYGVESSNPEILAFVT----INPEARMSAKNIEAELTSSLTDYMIP-QVIEIE 515
V V+ ++A V + E + IE L L Y +P +VI +E
Sbjct: 435 VKESAVIAAPHPDFGEAVVAVVVPKNMVEDEQKFEEDLIEM-LRKKLAKYKVPKKVILLE 493
Query: 516 TVP 524
+P
Sbjct: 494 ELP 496
>U58758-13|AAB93427.1| 565|Caenorhabditis elegans Hypothetical
protein ZK1127.2 protein.
Length = 565
Score = 40.7 bits (91), Expect = 7e-04
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Frame = +3
Query: 222 TGDFGILD-KGVILYAGRADSQVKIRGHRVDLQEVDHAVSTIPCVDNCVVLCYGVESSNP 398
TGD G +D KG I GR +K+ G +V E++ + P V +C V+ E
Sbjct: 423 TGDLGSIDDKGRIHVTGRIKELIKVNGMQVPPVEIEDVLLLHPKVKDCAVIGVPDEHKGE 482
Query: 399 EILAFVTINPEARMSAKNIEAELTSSLTDYMIPQVIE-IETVPVLVNGKV 545
A++ + + ++ + + L+ Y E I+++P L +GK+
Sbjct: 483 SPKAYI-VKKDHTLTEAELTEFVRQKLSSYKWIDTYEFIDSIPKLPSGKI 531
>U41625-5|AAA83327.1| 700|Caenorhabditis elegans Suppressor of
activated let-60ras protein 5 protein.
Length = 700
Score = 39.9 bits (89), Expect = 0.001
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Frame = +3
Query: 249 GVILYAGRADSQVKIRGHRVDLQEVDHAVSTIPCVDNCVVLCYGVESS-NPEILAFVTIN 425
G + GR+D+ + G R+ E+ V IP + +C+V VE + E+L FV +
Sbjct: 563 GGVEMLGRSDATLNRGGVRIGTAEIYSVVEKIPHIADCIVAGRLVEEGMDEEVLLFVKMV 622
Query: 426 PEARMSAKNIEAELTSSLTDYMIP-----QVIEIETVPVLVNGK 542
P ++ +I+A + S L + M P ++ ++ +P +GK
Sbjct: 623 PGQELT-HSIQAAIVSKLRNDMSPRHVPNKIYAVDDIPYTSSGK 665
>AY091467-1|AAM44123.1| 700|Caenorhabditis elegans SUR-5 protein.
Length = 700
Score = 39.9 bits (89), Expect = 0.001
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Frame = +3
Query: 249 GVILYAGRADSQVKIRGHRVDLQEVDHAVSTIPCVDNCVVLCYGVESS-NPEILAFVTIN 425
G + GR+D+ + G R+ E+ V IP + +C+V VE + E+L FV +
Sbjct: 563 GGVEMLGRSDATLNRGGVRIGTAEIYSVVEKIPHIADCIVAGRLVEEGMDEEVLLFVKMV 622
Query: 426 PEARMSAKNIEAELTSSLTDYMIP-----QVIEIETVPVLVNGK 542
P ++ +I+A + S L + M P ++ ++ +P +GK
Sbjct: 623 PGQELT-HSIQAAIVSKLRNDMSPRHVPNKIYAVDDIPYTSSGK 665
>U23521-8|AAC46810.4| 505|Caenorhabditis elegans Hypothetical
protein F41C3.3 protein.
Length = 505
Score = 37.5 bits (83), Expect = 0.006
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 8/123 (6%)
Frame = +3
Query: 180 NPHNTHPNFAK--LYRTGDFGILDK-GVILYAGRADSQVKIRGHRVDLQEVDHAVSTIPC 350
NP T F + ++TGD G LD+ G + GR+ V G V +E++ + T+P
Sbjct: 363 NPKKTAEEFTEDGWFKTGDVGHLDEDGYLTIGGRSKDMVITGGLNVYPKELEDFIDTLPF 422
Query: 351 VDNCVVLCYGVESSNPEILAFVTINPEARMSAKNIEAEL----TSSLTDYMIP-QVIEIE 515
V V+ ++A V + E K E +L + +Y +P +VI ++
Sbjct: 423 VKESAVIASPHPDFGEAVVAIV-VPSEKVTDEKEFEKKLIGIMKKKVANYKVPKRVIVLD 481
Query: 516 TVP 524
+P
Sbjct: 482 DLP 484
>U88308-1|AAB42324.2| 461|Caenorhabditis elegans Hypothetical
protein C32E8.6a protein.
Length = 461
Score = 36.3 bits (80), Expect = 0.014
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 3/111 (2%)
Frame = +3
Query: 222 TGDFGILDKGVI--LYAGRADSQVKIRGHRVDLQEVDHAVSTIPCVDNCVVLCYGVESSN 395
TGD G L I + GR+ +KIRG +V+ EV+ + + V +C V +
Sbjct: 353 TGDLGCLSFKTIELMIVGRSKEMMKIRGWQVNPNEVEDVIRKVEGVLDCAVY-----QNQ 407
Query: 396 PEILAFVTINPEARMSAKNIEAELTSSLTDY-MIPQVIEIETVPVLVNGKV 545
++ A + NP+++ I + +L Y + VI +E +P +GK+
Sbjct: 408 EKLTAKIIGNPDSKADIFKI---VKDNLASYKQLDDVIFVEELPRNPSGKL 455
>Z70684-10|CAA94602.2| 684|Caenorhabditis elegans Hypothetical
protein F28D1.9 protein.
Length = 684
Score = 34.7 bits (76), Expect = 0.044
Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 8/107 (7%)
Frame = +3
Query: 216 YRTGDFGILDK-GVILYAGRADSQVKIRGHRVDLQEVDHAVSTIPCVDNCVVLCYGVESS 392
+ TGD D+ G + + R + +G V EV+ + I + + V YGVE
Sbjct: 522 FLTGDLLHWDRLGYVYFKDRTGDTFRWKGENVSTTEVEAILHPITGLSDATV--YGVEVP 579
Query: 393 NPE-------ILAFVTINPEARMSAKNIEAELTSSLTDYMIPQVIEI 512
E ++ V+ + + A L SSLT Y IPQ + I
Sbjct: 580 QREGRVGMASVVRVVSHEEDETQFVHRVGARLASSLTSYAIPQFMRI 626
>Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical
protein F16A11.3a protein.
Length = 1490
Score = 34.3 bits (75), Expect = 0.058
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Frame = -2
Query: 181 LWMKRCGSLPRTYPLARLKPATHTSPGSPSRT---HRIFSSRR*T*LFDIGTPI 29
++++R G+LP ++P K ATH+S SP ++ + SSR+ LFD PI
Sbjct: 616 IFLRRLGALPPSFP---KKKATHSSSSSPRKSPTRSPLLSSRKKGLLFDFAAPI 666
>Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical
protein F16A11.3c protein.
Length = 1046
Score = 34.3 bits (75), Expect = 0.058
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Frame = -2
Query: 181 LWMKRCGSLPRTYPLARLKPATHTSPGSPSRT---HRIFSSRR*T*LFDIGTPI 29
++++R G+LP ++P K ATH+S SP ++ + SSR+ LFD PI
Sbjct: 616 IFLRRLGALPPSFP---KKKATHSSSSSPRKSPTRSPLLSSRKKGLLFDFAAPI 666
>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical
protein F16A11.3a protein.
Length = 1490
Score = 34.3 bits (75), Expect = 0.058
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Frame = -2
Query: 181 LWMKRCGSLPRTYPLARLKPATHTSPGSPSRT---HRIFSSRR*T*LFDIGTPI 29
++++R G+LP ++P K ATH+S SP ++ + SSR+ LFD PI
Sbjct: 616 IFLRRLGALPPSFP---KKKATHSSSSSPRKSPTRSPLLSSRKKGLLFDFAAPI 666
>Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical
protein F16A11.3c protein.
Length = 1046
Score = 34.3 bits (75), Expect = 0.058
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Frame = -2
Query: 181 LWMKRCGSLPRTYPLARLKPATHTSPGSPSRT---HRIFSSRR*T*LFDIGTPI 29
++++R G+LP ++P K ATH+S SP ++ + SSR+ LFD PI
Sbjct: 616 IFLRRLGALPPSFP---KKKATHSSSSSPRKSPTRSPLLSSRKKGLLFDFAAPI 666
>U39655-3|AAA80409.2| 718|Caenorhabditis elegans Fatty acid coa
synthetase familyprotein 17 protein.
Length = 718
Score = 33.1 bits (72), Expect = 0.13
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Frame = +3
Query: 105 GEVCVAGFNLARGYVRGKDPHRFIHNPHNTHPNFAKLYRTGDFG-ILDKGVILYAGRADS 281
GE+ ++G N+A GY + + + N + TGD G + G + R
Sbjct: 527 GEILISGPNVALGYFKNDEKTK----EEFVKVNGKTFFATGDIGEFREDGSLKIIDRKKD 582
Query: 282 QVKI-RGHRVDLQEVDHAVSTIPCVDNCVVLCYGVESSNPEILAFVTIN 425
+K+ G + L +V+ + T P VDN V YG +S+ ++A V N
Sbjct: 583 LLKLAHGEYISLGKVETNLLTNPNVDN--VCVYG-DSNKSFLVALVVPN 628
>AF016686-12|AAB66234.1| 723|Caenorhabditis elegans Hypothetical
protein R07C3.4 protein.
Length = 723
Score = 31.9 bits (69), Expect = 0.31
Identities = 40/146 (27%), Positives = 59/146 (40%), Gaps = 3/146 (2%)
Frame = +3
Query: 30 IGVPISNNYVYLLD-ENMRCVREGEPGEVCVAGFNLARGYVRGKDPHRFIHNPHNTHPNF 206
+G PIS + L+D + + GEV V G N+ GY KDP T F
Sbjct: 496 VGPPISCTSIKLVDIAELGYFVDENGGEVLVKGHNVTSGYY--KDPKATA--SAFTEDGF 551
Query: 207 AKLYRTGDFG-ILDKGVILYAGRADSQVKI-RGHRVDLQEVDHAVSTIPCVDNCVVLCYG 380
K TGD G +G + R D+ +K+ +G V + + V +C
Sbjct: 552 MK---TGDIGKFTPEGTLQLIDRRDNVLKLPQGEFVAPDLTESLYISSKFVQQ---ICVH 605
Query: 381 VESSNPEILAFVTINPEARMSAKNIE 458
P ++A V +PE S N+E
Sbjct: 606 GNKEKPWLVAVVVPDPEYLASHANLE 631
>Z70751-1|CAA94751.1| 544|Caenorhabditis elegans Hypothetical
protein F11A3.1 protein.
Length = 544
Score = 31.5 bits (68), Expect = 0.41
Identities = 33/151 (21%), Positives = 66/151 (43%), Gaps = 4/151 (2%)
Frame = +3
Query: 105 GEVCVAGFNLARGYVRGKDPHRFIHNPHNTHPNFAKLY-RTGDFGILDK-GVILYAGRAD 278
GE+CV G + GY + P T + TGD G L++ G + R
Sbjct: 391 GEICVRGPTIMLGY---------LGRPEATASTVIDGWLHTGDIGYLNEDGNLFIVDRLK 441
Query: 279 SQVKIRGHRVDLQEVDHAVSTIPCVDNCVVLCYGVESSNPEILAFVTINPEARMSAKNIE 458
+K++G +V E++ + + P + +C V+ + AFV + + ++ + ++
Sbjct: 442 ELIKVKGLQVPPAELEDLLLSHPKIRDCAVIGIPDAKAGELPKAFV-VRADNTLTEQEVK 500
Query: 459 AELTSSLTDY-MIPQVIE-IETVPVLVNGKV 545
+ ++ Y + +E IE +P GK+
Sbjct: 501 DFVKPKVSPYKQLEGGVEFIEEIPKSAAGKI 531
>U97550-5|AAK18982.2| 497|Caenorhabditis elegans Hypothetical
protein T20F7.7 protein.
Length = 497
Score = 29.9 bits (64), Expect = 1.2
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Frame = +3
Query: 222 TGDFGILDKGVILYA-GRADSQVKIRGHRVDLQEVDHAVSTIPCVDNCVVLCYGVESSNP 398
TGD + +KG Y R +K+ G++V E+++ + T+P V V+ E
Sbjct: 378 TGDI-VTEKGGFFYVVDRMKDLIKLNGYQVSPTEIENVILTLPKVAEVAVVGIEDELCGQ 436
Query: 399 EILAFVTI--NPEARMSAKNIEAELTSSLT 482
A++ + N + + K++E + L+
Sbjct: 437 LPKAYIVLEKNADELLFLKHLEHTMKEKLS 466
>AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine
nucleotide exchange factorfor RAS protein.
Length = 1413
Score = 28.3 bits (60), Expect = 3.8
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Frame = +3
Query: 327 HAVSTIPCVDNCVVLCYGVES----SNPEILAFVTINPEARMSAKNIEAELTS-SLTDYM 491
H++ D+ V C+ +ES S P+I FV NPE + + ++T+ S+ D +
Sbjct: 554 HSIDVFDIPDSEVTNCFKIESHDKSSLPKIYHFVCKNPEEKRQWMAVLVKVTTKSVLDRI 613
Query: 492 IP--QVIEIETVPVLVNG 539
+ + E + +P++V G
Sbjct: 614 LDNHEKEEAKRIPLVVPG 631
>AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila sos
homolog protein 1 protein.
Length = 1493
Score = 28.3 bits (60), Expect = 3.8
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Frame = +3
Query: 327 HAVSTIPCVDNCVVLCYGVES----SNPEILAFVTINPEARMSAKNIEAELTS-SLTDYM 491
H++ D+ V C+ +ES S P+I FV NPE + + ++T+ S+ D +
Sbjct: 554 HSIDVFDIPDSEVTNCFKIESHDKSSLPKIYHFVCKNPEEKRQWMAVLVKVTTKSVLDRI 613
Query: 492 IP--QVIEIETVPVLVNG 539
+ + E + +P++V G
Sbjct: 614 LDNHEKEEAKRIPLVVPG 631
>U21310-1|AAA62519.1| 997|Caenorhabditis elegans Hypothetical
protein F40H6.2 protein.
Length = 997
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2
Query: 163 GSLPRTYPLARLKPATHTSPGSPS 92
G LP T P KP+ TSP +PS
Sbjct: 608 GHLPNTIPEEPTKPSQSTSPSTPS 631
>AF003136-7|ABE73336.1| 1539|Caenorhabditis elegans Hypothetical
protein F28B3.1 protein.
Length = 1539
Score = 27.1 bits (57), Expect = 8.8
Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 6/106 (5%)
Frame = +3
Query: 57 VYLLDENMRCVREGEPGEVCVAGFNLARGY--VRGKDPHRFIHNPHNTHPNF---AKLYR 221
V +D + R + E GE+CV+ + A+ Y + G+ H F P + + R
Sbjct: 688 VTAIDGSNRLCQADEIGEICVSANSTAQLYWALDGQTHHTFKVEPVGEYGKLIGAVRYVR 747
Query: 222 TGDFGIL-DKGVILYAGRADSQVKIRGHRVDLQEVDHAVSTIPCVD 356
+G G + G++ R S + + G D ++T+ V+
Sbjct: 748 SGLIGFMGPDGMVFVVARRQSLLAVSGR---YHSADDIIATVLAVE 790
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,805,332
Number of Sequences: 27780
Number of extensions: 317351
Number of successful extensions: 825
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 823
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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