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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_A20
         (275 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78016-5|CAB01442.2|  479|Caenorhabditis elegans Hypothetical pr...    29   0.62 
Z68010-3|CAA92011.1|  558|Caenorhabditis elegans Hypothetical pr...    29   0.62 
Z67756-4|CAA91765.1|  558|Caenorhabditis elegans Hypothetical pr...    29   0.62 
Z54327-13|CAE48494.1|  619|Caenorhabditis elegans Hypothetical p...    29   0.62 
Z54307-9|CAE48498.1|  619|Caenorhabditis elegans Hypothetical pr...    29   0.62 
AF005246-1|AAB95119.1|  556|Caenorhabditis elegans voltage-depen...    29   0.62 
U58760-3|AAL02443.1|   53|Caenorhabditis elegans Ribosomal prote...    27   1.4  
U58760-2|AAK31460.1|  130|Caenorhabditis elegans Ribosomal prote...    27   1.4  
U40798-6|AAA81476.1| 1003|Caenorhabditis elegans Temporarily ass...    26   4.4  
AC025716-14|AAK39603.1|  227|Caenorhabditis elegans Hypothetical...    26   4.4  
AC024753-9|AAF60460.1|  139|Caenorhabditis elegans Hypothetical ...    26   4.4  
Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical pr...    25   5.8  
Z69384-8|CAM06585.1|  495|Caenorhabditis elegans Hypothetical pr...    25   5.8  
Z69384-7|CAA93417.2|  502|Caenorhabditis elegans Hypothetical pr...    25   5.8  
Z48245-2|CAA88291.1|  309|Caenorhabditis elegans Hypothetical pr...    25   5.8  
Z37139-10|CAA85495.1|  309|Caenorhabditis elegans Hypothetical p...    25   5.8  
U95074-2|AAB94648.1|  309|Caenorhabditis elegans cyclophilin iso...    25   5.8  
U36581-1|AAC47131.1|  309|Caenorhabditis elegans cyclophilin iso...    25   5.8  
U76402-1|AAB39734.1|  777|Caenorhabditis elegans degenerin protein.    25   7.7  
U40798-3|AAA81473.2|  777|Caenorhabditis elegans Uncoordinated p...    25   7.7  
AF039039-6|AAO25996.1|  308|Caenorhabditis elegans Troponin t pr...    25   7.7  
AF039039-5|AAB94176.2|  347|Caenorhabditis elegans Troponin t pr...    25   7.7  
AF026202-3|AAB71244.1|  156|Caenorhabditis elegans Hypothetical ...    25   7.7  

>Z78016-5|CAB01442.2|  479|Caenorhabditis elegans Hypothetical
           protein R186.5 protein.
          Length = 479

 Score = 28.7 bits (61), Expect = 0.62
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 257 ILSRVCAVNGKFKANLPLGTFAANFATFYS 168
           ++  +CA+ G     LP+    +NFA FYS
Sbjct: 391 LIGSICALAGVLTIALPVPVIVSNFAMFYS 420


>Z68010-3|CAA92011.1|  558|Caenorhabditis elegans Hypothetical
           protein R07A4.1 protein.
          Length = 558

 Score = 28.7 bits (61), Expect = 0.62
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 257 ILSRVCAVNGKFKANLPLGTFAANFATFYS 168
           ++  +CAV G     LP+    +NFA FYS
Sbjct: 421 LVGSLCAVMGVLTIALPVPVIVSNFAMFYS 450


>Z67756-4|CAA91765.1|  558|Caenorhabditis elegans Hypothetical
           protein R07A4.1 protein.
          Length = 558

 Score = 28.7 bits (61), Expect = 0.62
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 257 ILSRVCAVNGKFKANLPLGTFAANFATFYS 168
           ++  +CAV G     LP+    +NFA FYS
Sbjct: 421 LVGSLCAVMGVLTIALPVPVIVSNFAMFYS 450


>Z54327-13|CAE48494.1|  619|Caenorhabditis elegans Hypothetical
           protein F14F11.1h protein.
          Length = 619

 Score = 28.7 bits (61), Expect = 0.62
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 257 ILSRVCAVNGKFKANLPLGTFAANFATFYS 168
           ++  VCA+ G     LP+    +NFA FYS
Sbjct: 489 LVGSVCALMGVLTIALPVPVIVSNFAMFYS 518


>Z54307-9|CAE48498.1|  619|Caenorhabditis elegans Hypothetical
           protein F14F11.1h protein.
          Length = 619

 Score = 28.7 bits (61), Expect = 0.62
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 257 ILSRVCAVNGKFKANLPLGTFAANFATFYS 168
           ++  VCA+ G     LP+    +NFA FYS
Sbjct: 489 LVGSVCALMGVLTIALPVPVIVSNFAMFYS 518


>AF005246-1|AAB95119.1|  556|Caenorhabditis elegans
           voltage-dependent potassium channelalpha subunit
           protein.
          Length = 556

 Score = 28.7 bits (61), Expect = 0.62
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 257 ILSRVCAVNGKFKANLPLGTFAANFATFYS 168
           ++  +CAV G     LP+    +NFA FYS
Sbjct: 419 LVGSLCAVMGVLTIALPVPVIVSNFAMFYS 448


>U58760-3|AAL02443.1|   53|Caenorhabditis elegans Ribosomal protein,
           large subunitprotein 22, isoform b protein.
          Length = 53

 Score = 27.5 bits (58), Expect = 1.4
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 213 ISLKFTIDCTHPAEDSILDV 272
           + LKF ++C +P ED IL +
Sbjct: 19  VHLKFNVECKNPVEDGILRI 38


>U58760-2|AAK31460.1|  130|Caenorhabditis elegans Ribosomal protein,
           large subunitprotein 22, isoform a protein.
          Length = 130

 Score = 27.5 bits (58), Expect = 1.4
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 213 ISLKFTIDCTHPAEDSILDV 272
           + LKF ++C +P ED IL +
Sbjct: 19  VHLKFNVECKNPVEDGILRI 38


>U40798-6|AAA81476.1| 1003|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 158 protein.
          Length = 1003

 Score = 25.8 bits (54), Expect = 4.4
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = -1

Query: 221 KANLPLGTFAANFATFYSFLTSLLV*LAFLCDGLLCNCHLGNRH 90
           +A++P GT AAN  T + + +     LAF+  G + N  L +++
Sbjct: 357 QASIPAGTIAANLTTSFVYFS-----LAFIFGGAIDNAVLRDKN 395


>AC025716-14|AAK39603.1|  227|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.16 protein.
          Length = 227

 Score = 25.8 bits (54), Expect = 4.4
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +2

Query: 65  GCRNRHEARVCCQDGSYKEARRKERPVTPEDW*ERSKRWQNSRQR 199
           GC   H  R   + G  K AR K    +  D  + SKR QNS+++
Sbjct: 31  GCTTGH--RENSRGGKGKSARSKRSKRSKRDKKQNSKRQQNSKRQ 73


>AC024753-9|AAF60460.1|  139|Caenorhabditis elegans Hypothetical
           protein Y23H5B.2 protein.
          Length = 139

 Score = 25.8 bits (54), Expect = 4.4
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +2

Query: 65  GCRNRHEARVCCQDGSYKEARRKERPVTPEDW*ERSKRWQNSRQR 199
           GC   H  R   + G  K AR K    +  D  + SKR QNS+++
Sbjct: 31  GCTTGH--RENSRGGKGKSARSKRSKRSKRDKKQNSKRQQNSKRQ 73


>Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical
           protein F28D9.1 protein.
          Length = 601

 Score = 25.4 bits (53), Expect = 5.8
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +1

Query: 34  VAAL*TSGSPGLQESARGTCLLPRWQLQRSPSQRKASYTRR 156
           VAA   SGSP  + S   +   P  + +RSPSQ K+   +R
Sbjct: 293 VAARAKSGSPRRRRSPSASKSPPPARRRRSPSQSKSPAPKR 333


>Z69384-8|CAM06585.1|  495|Caenorhabditis elegans Hypothetical
           protein T11G6.2b protein.
          Length = 495

 Score = 25.4 bits (53), Expect = 5.8
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -2

Query: 151 WCNWPFFATGFFVTAILATDTCLVPI 74
           W  W     GF V  IL T  CLVP+
Sbjct: 427 WFGWDAVFYGFIVM-ILCTALCLVPV 451


>Z69384-7|CAA93417.2|  502|Caenorhabditis elegans Hypothetical
           protein T11G6.2a protein.
          Length = 502

 Score = 25.4 bits (53), Expect = 5.8
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -2

Query: 151 WCNWPFFATGFFVTAILATDTCLVPI 74
           W  W     GF V  IL T  CLVP+
Sbjct: 434 WFGWDAVFYGFIVM-ILCTALCLVPV 458


>Z48245-2|CAA88291.1|  309|Caenorhabditis elegans Hypothetical
           protein T27D1.1 protein.
          Length = 309

 Score = 25.4 bits (53), Expect = 5.8
 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = +2

Query: 128 RKERPVTPEDW*ERS-KRWQNSRQRCQEED 214
           R+ER  TPE W   +  +W +   +  EED
Sbjct: 278 RRERSATPEHWRRNAPTKWVHDSHKHPEED 307


>Z37139-10|CAA85495.1|  309|Caenorhabditis elegans Hypothetical
           protein T27D1.1 protein.
          Length = 309

 Score = 25.4 bits (53), Expect = 5.8
 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = +2

Query: 128 RKERPVTPEDW*ERS-KRWQNSRQRCQEED 214
           R+ER  TPE W   +  +W +   +  EED
Sbjct: 278 RRERSATPEHWRRNAPTKWVHDSHKHPEED 307


>U95074-2|AAB94648.1|  309|Caenorhabditis elegans cyclophilin
           isoform 9 protein.
          Length = 309

 Score = 25.4 bits (53), Expect = 5.8
 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = +2

Query: 128 RKERPVTPEDW*ERS-KRWQNSRQRCQEED 214
           R+ER  TPE W   +  +W +   +  EED
Sbjct: 278 RRERSATPEHWRRNAPTKWVHDSHKHPEED 307


>U36581-1|AAC47131.1|  309|Caenorhabditis elegans cyclophilin
           isoform 9 protein.
          Length = 309

 Score = 25.4 bits (53), Expect = 5.8
 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = +2

Query: 128 RKERPVTPEDW*ERS-KRWQNSRQRCQEED 214
           R+ER  TPE W   +  +W +   +  EED
Sbjct: 278 RRERSATPEHWRRNAPTKWVHDSHKHPEED 307


>U76402-1|AAB39734.1|  777|Caenorhabditis elegans degenerin protein.
          Length = 777

 Score = 25.0 bits (52), Expect = 7.7
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 259 LSSAGCVQSMVNLRLIFLLAPLPR 188
           L  AG + +     LIFL+A LPR
Sbjct: 383 LKDAGAITTQTKENLIFLVAALPR 406


>U40798-3|AAA81473.2|  777|Caenorhabditis elegans Uncoordinated
           protein 8 protein.
          Length = 777

 Score = 25.0 bits (52), Expect = 7.7
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 259 LSSAGCVQSMVNLRLIFLLAPLPR 188
           L  AG + +     LIFL+A LPR
Sbjct: 383 LKDAGAITTQTKENLIFLVAALPR 406


>AF039039-6|AAO25996.1|  308|Caenorhabditis elegans Troponin t
           protein 4, isoform b protein.
          Length = 308

 Score = 25.0 bits (52), Expect = 7.7
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +2

Query: 71  RNRHEARVCCQDGSYKEARRKERPVTPEDW*ERSKRWQNSRQRCQEED 214
           + RHE     +   Y++ARR ER    E+  E+ K  Q  R+  +E++
Sbjct: 55  KRRHENDEQAKLEDYEKARRSEREKEEEEL-EKLKEKQAQRKLAREQE 101


>AF039039-5|AAB94176.2|  347|Caenorhabditis elegans Troponin t
           protein 4, isoform a protein.
          Length = 347

 Score = 25.0 bits (52), Expect = 7.7
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +2

Query: 71  RNRHEARVCCQDGSYKEARRKERPVTPEDW*ERSKRWQNSRQRCQEED 214
           + RHE     +   Y++ARR ER    E+  E+ K  Q  R+  +E++
Sbjct: 55  KRRHENDEQAKLEDYEKARRSEREKEEEEL-EKLKEKQAQRKLAREQE 101


>AF026202-3|AAB71244.1|  156|Caenorhabditis elegans Hypothetical
           protein C10E2.4 protein.
          Length = 156

 Score = 25.0 bits (52), Expect = 7.7
 Identities = 13/58 (22%), Positives = 23/58 (39%)
 Frame = +2

Query: 38  RRSKLVDPPGCRNRHEARVCCQDGSYKEARRKERPVTPEDW*ERSKRWQNSRQRCQEE 211
           R S +   P C++  ++    +        R+ R    E W    ++WQN + R   E
Sbjct: 19  RTSVIHTAPACQSVLDSEGDTESTRPTPTPRRSRNSAEEQWLAHGEKWQNEQLRLSME 76


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,087,133
Number of Sequences: 27780
Number of extensions: 136174
Number of successful extensions: 393
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 393
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 238114316
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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