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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_A15
         (498 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr...    31   0.35 
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p...    31   0.35 
AF078788-7|AAC26958.1|  227|Caenorhabditis elegans Hypothetical ...    29   1.4  
U58750-13|AAB00653.1|  616|Caenorhabditis elegans Hypothetical p...    29   1.9  
Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical pr...    28   3.3  
Z50863-2|CAA90737.1|  351|Caenorhabditis elegans Hypothetical pr...    28   4.3  
Z82051-3|CAB04817.1|  337|Caenorhabditis elegans Hypothetical pr...    27   10.0 
Z81086-3|CAD56586.1|  711|Caenorhabditis elegans Hypothetical pr...    27   10.0 
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr...    27   10.0 
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr...    27   10.0 
Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p...    27   10.0 
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr...    27   10.0 
U28991-7|AAK68312.1|  626|Caenorhabditis elegans Hypothetical pr...    27   10.0 
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re...    27   10.0 

>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
            F25H8.3 protein.
          Length = 2165

 Score = 31.5 bits (68), Expect = 0.35
 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
 Frame = +3

Query: 207  NRDPC-RYIRGAWSECDSKTN--IKSRKLTL-----KKGDPANCDTVKTVQKKCKKACR- 359
            NR PC R++ G WSEC    +  +K R         ++   + C   +T +   + AC  
Sbjct: 1072 NRIPCPRWVYGHWSECSRSCDGGVKMRHAQCLDAADRETHTSRCGPAQTQEHCNEHACTW 1131

Query: 360  YEKSAWSECNA 392
            ++   WS+C+A
Sbjct: 1132 WQFGVWSDCSA 1142



 Score = 26.6 bits (56), Expect = 10.0
 Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 20/101 (19%)
 Frame = +3

Query: 237  AWSECDSKTNIKSRKLTLKKGDPA--------NCD-TVKTVQK-KCK-KAC-RYEKSAWS 380
            AWS C +K    +++  ++  +P+         CD T K V++ +C+ K C R++ + WS
Sbjct: 1644 AWSACSAKCGRGTKRRVVECVNPSLNVTVASTECDQTKKPVEEVRCRTKHCPRWKTTTWS 1703

Query: 381  ECNAN-GEMTRTDTLKAN-------SDSSCEPSRRATKKCN 479
             C+   G   R   ++         SDS C P  +     N
Sbjct: 1704 SCSVTCGRGIRRREVQCYRGRKNLVSDSECNPKTKLNSVAN 1744


>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
            protein F25H8.3 protein.
          Length = 2165

 Score = 31.5 bits (68), Expect = 0.35
 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
 Frame = +3

Query: 207  NRDPC-RYIRGAWSECDSKTN--IKSRKLTL-----KKGDPANCDTVKTVQKKCKKACR- 359
            NR PC R++ G WSEC    +  +K R         ++   + C   +T +   + AC  
Sbjct: 1072 NRIPCPRWVYGHWSECSRSCDGGVKMRHAQCLDAADRETHTSRCGPAQTQEHCNEHACTW 1131

Query: 360  YEKSAWSECNA 392
            ++   WS+C+A
Sbjct: 1132 WQFGVWSDCSA 1142



 Score = 26.6 bits (56), Expect = 10.0
 Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 20/101 (19%)
 Frame = +3

Query: 237  AWSECDSKTNIKSRKLTLKKGDPA--------NCD-TVKTVQK-KCK-KAC-RYEKSAWS 380
            AWS C +K    +++  ++  +P+         CD T K V++ +C+ K C R++ + WS
Sbjct: 1644 AWSACSAKCGRGTKRRVVECVNPSLNVTVASTECDQTKKPVEEVRCRTKHCPRWKTTTWS 1703

Query: 381  ECNAN-GEMTRTDTLKAN-------SDSSCEPSRRATKKCN 479
             C+   G   R   ++         SDS C P  +     N
Sbjct: 1704 SCSVTCGRGIRRREVQCYRGRKNLVSDSECNPKTKLNSVAN 1744


>AF078788-7|AAC26958.1|  227|Caenorhabditis elegans Hypothetical
           protein ZC190.8 protein.
          Length = 227

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
 Frame = +3

Query: 258 KTNIKSRKLTLKKGDPANCDTVKTVQKKCKKACRYE-KSAWSECNANGEMTRTDTLKANS 434
           K+N KS   + + G P N     T +K  KK+ R + K   ++ N   E T   T K   
Sbjct: 158 KSNRKSTDSSTELGSPTNSQYSTTTRKSSKKSTRSDRKMEKTQRNEKSEHTEEQTDKTEK 217

Query: 435 DSSCEPSRR 461
                 SR+
Sbjct: 218 TVKSTASRK 226


>U58750-13|AAB00653.1|  616|Caenorhabditis elegans Hypothetical
           protein F55G1.13 protein.
          Length = 616

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = +3

Query: 342 CKKACRYEKSAWSECNANGEMTRTDTLKANSDSSCEPS--RRATKKCN 479
           C  A R   +  SEC  + E T+T      + +SC P+    + ++CN
Sbjct: 29  CYPANRTSATTCSECTCSDESTQTSDTTCTAPTSCSPNPCTLSNQQCN 76


>Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical
           protein R13H4.8 protein.
          Length = 212

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +1

Query: 91  CCGLWQGFCCCRSHWC 138
           CCG   G CCCR   C
Sbjct: 79  CCGCGCGCCCCRPRCC 94


>Z50863-2|CAA90737.1|  351|Caenorhabditis elegans Hypothetical
           protein C14H10.4 protein.
          Length = 351

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 16/71 (22%), Positives = 34/71 (47%)
 Frame = -3

Query: 496 FTCLFLLHFFVARLLGSQEESLLAFKVSVLVISPLALHSLQADFS*RQAFLHFFCTVFTV 317
           F  ++L  FFV  L+G+ ++ +L F +  ++ S + + +     +   + + F    +T 
Sbjct: 23  FFVIYLTTFFVKNLIGTYKKMILIFSLLGILFSGIEILARPFAHNYNNSLMFFSLNFWTS 82

Query: 316 SQLAGSPFLRV 284
           SQ     F+ V
Sbjct: 83  SQTLPEFFISV 93


>Z82051-3|CAB04817.1|  337|Caenorhabditis elegans Hypothetical
           protein T23D5.6 protein.
          Length = 337

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -3

Query: 496 FTCLFLLHFFVARLLGSQEESLLAFKVSVLVISPL 392
           FT +FL  FFV + LG+ +  +L F +  +  + L
Sbjct: 24  FTLIFLTPFFVRKDLGAYKHLILLFSILGIAFASL 58


>Z81086-3|CAD56586.1|  711|Caenorhabditis elegans Hypothetical
           protein F53B6.2b protein.
          Length = 711

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 18/75 (24%)
 Frame = +3

Query: 222 RYIRGAWSECDSKT----NIKSRKLTLK---KGDPAN-----CDTVKTVQKKCKKAC--- 356
           R+  G WSEC  KT      ++R ++ K    G+  N     C+++ +V+    + C   
Sbjct: 477 RWDIGHWSECRQKTCHVAGYQARGISCKVTFHGEIRNVDNSICESLASVRPPETRPCHRE 536

Query: 357 ---RYEKSAWSECNA 392
              R+E S WSEC++
Sbjct: 537 DCPRWEASQWSECSS 551


>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical protein
            F53B6.2a protein.
          Length = 1045

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 18/75 (24%)
 Frame = +3

Query: 222  RYIRGAWSECDSKT----NIKSRKLTLK---KGDPAN-----CDTVKTVQKKCKKAC--- 356
            R+  G WSEC  KT      ++R ++ K    G+  N     C+++ +V+    + C   
Sbjct: 811  RWDIGHWSECRQKTCHVAGYQARGISCKVTFHGEIRNVDNSICESLASVRPPETRPCHRE 870

Query: 357  ---RYEKSAWSECNA 392
               R+E S WSEC++
Sbjct: 871  DCPRWEASQWSECSS 885


>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
            F29D11.1 protein.
          Length = 4753

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
 Frame = +3

Query: 246  ECDSKTNIKSRKLTLKKGDPANCDTVKTVQKKCKKA---CRYE---KSAWSECNANGEMT 407
            EC  +  +    +T   G+  + +  KT +K+C K    C  +    S W EC+ + +  
Sbjct: 3068 ECIPRAWLCDGDVTCAGGEDESTELCKTEKKECNKGEFRCSNQHCIHSTW-ECDGDNDCL 3126

Query: 408  RTDTLKAN-SDSSCEPS--RRATKKCNKN 485
                  AN + SSC+P   + A  KC  N
Sbjct: 3127 DGSDEHANCTYSSCQPDFFQCANHKCVPN 3155


>Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
            protein C28A5.6 protein.
          Length = 1061

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 23/102 (22%), Positives = 34/102 (33%)
 Frame = +3

Query: 186  RSVRGAKNRDPCRYIRGAWSECDSKTNIKSRKLTLKKGDPANCDTVKTVQKKCKKACRYE 365
            R  +  K +D C       S C  +T+    + +   G        K+ ++K K A R  
Sbjct: 773  RKSKSEKKKDSCERSSAETSSCTEQTSSPMSEASSSDGRKKPKKAGKSAERKEKSAERNP 832

Query: 366  KSAWSECNANGEMTRTDTLKANSDSSCEPSRRATKKCNKNKQ 491
             S   +  A   M   +     SD       RA     K KQ
Sbjct: 833  SSEKDDDGATEAMIGVERRSTPSDVVKNKKGRAKGDPEKQKQ 874


>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical protein
            C28A5.6 protein.
          Length = 1061

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 23/102 (22%), Positives = 34/102 (33%)
 Frame = +3

Query: 186  RSVRGAKNRDPCRYIRGAWSECDSKTNIKSRKLTLKKGDPANCDTVKTVQKKCKKACRYE 365
            R  +  K +D C       S C  +T+    + +   G        K+ ++K K A R  
Sbjct: 773  RKSKSEKKKDSCERSSAETSSCTEQTSSPMSEASSSDGRKKPKKAGKSAERKEKSAERNP 832

Query: 366  KSAWSECNANGEMTRTDTLKANSDSSCEPSRRATKKCNKNKQ 491
             S   +  A   M   +     SD       RA     K KQ
Sbjct: 833  SSEKDDDGATEAMIGVERRSTPSDVVKNKKGRAKGDPEKQKQ 874


>U28991-7|AAK68312.1|  626|Caenorhabditis elegans Hypothetical
           protein F08F8.9a protein.
          Length = 626

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
 Frame = +3

Query: 273 SRKLTLKKGDPANCDTVKTVQKKCK---KACRYEKSAWSECNANGEMTRT-DTLKANSDS 440
           SR +++ +   A+    + V++K +   +  R +   + E ++ G + R+ D  +A S  
Sbjct: 535 SRSISINEDPAASHYYGQRVERKKRLGGELARRQGRVYEEVSSPGPLKRSADQSRAGSIQ 594

Query: 441 SCE-PSRRATKKCNKNKQV 494
             E PSR+  ++ NKN QV
Sbjct: 595 PAEGPSRKQRRRNNKNVQV 613


>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
            protein protein.
          Length = 4753

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
 Frame = +3

Query: 246  ECDSKTNIKSRKLTLKKGDPANCDTVKTVQKKCKKA---CRYE---KSAWSECNANGEMT 407
            EC  +  +    +T   G+  + +  KT +K+C K    C  +    S W EC+ + +  
Sbjct: 3068 ECIPRAWLCDGDVTCAGGEDESTELCKTEKKECNKGEFRCSNQHCIHSTW-ECDGDNDCL 3126

Query: 408  RTDTLKAN-SDSSCEPS--RRATKKCNKN 485
                  AN + SSC+P   + A  KC  N
Sbjct: 3127 DGSDEHANCTYSSCQPDFFQCANHKCVPN 3155


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,344,416
Number of Sequences: 27780
Number of extensions: 181384
Number of successful extensions: 509
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 504
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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