Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_A09
         (577 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z83230-9|CAB05748.1|  248|Caenorhabditis elegans Hypothetical pr...    29   2.4  
AF067937-7|AAN84819.1|  392|Caenorhabditis elegans Hypothetical ...    29   2.4  
AF067937-6|AAF99915.1|  426|Caenorhabditis elegans Hypothetical ...    29   2.4  
U40948-5|AAA81731.2|  955|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z68752-7|CAA92982.2|  693|Caenorhabditis elegans Hypothetical pr...    27   7.2  
U13644-7|AAM48536.2|  700|Caenorhabditis elegans Hypothetical pr...    27   7.2  
U13644-6|AAB52678.1|  739|Caenorhabditis elegans Hypothetical pr...    27   7.2  
Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical pr...    27   9.5  
AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical ...    27   9.5  
AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.      27   9.5  
AC024805-3|AAK39338.1|  801|Caenorhabditis elegans Hypothetical ...    27   9.5  

>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical protein
            F32H2.5 protein.
          Length = 2586

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = +3

Query: 258  IGSLDLTNRQKLGAATAGVALDNVNGHGVSLTDTHIPGFGD 380
            IG +DL+    LG A     LDNV+ HG+ L     P  GD
Sbjct: 1832 IGKVDLSQNSSLGMAKL---LDNVSVHGILLDSIMDPTVGD 1869


>Z83230-9|CAB05748.1|  248|Caenorhabditis elegans Hypothetical
           protein F56A8.8 protein.
          Length = 248

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +1

Query: 454 PEILPDIANVPNFNTVGCGIDYMSQDTIGGSATAVHTD 567
           PE+L  + NV  F     GIDY++  T      +V+TD
Sbjct: 199 PEVLQSMLNVGTFGNQNIGIDYVTDCTREHYKKSVNTD 236


>AF067937-7|AAN84819.1|  392|Caenorhabditis elegans Hypothetical
           protein F22F7.1b protein.
          Length = 392

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +3

Query: 210 GVKVPFAGNDKNIVSAIGSLDLTNRQ 287
           GV VPF G DK+I++     D T+RQ
Sbjct: 237 GVAVPFPGADKSIINRSQYYDATSRQ 262


>AF067937-6|AAF99915.1|  426|Caenorhabditis elegans Hypothetical
           protein F22F7.1a protein.
          Length = 426

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +3

Query: 210 GVKVPFAGNDKNIVSAIGSLDLTNRQ 287
           GV VPF G DK+I++     D T+RQ
Sbjct: 237 GVAVPFPGADKSIINRSQYYDATSRQ 262


>U40948-5|AAA81731.2|  955|Caenorhabditis elegans Hypothetical
           protein F55D10.1 protein.
          Length = 955

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -2

Query: 537 NRILGHIVYSATDSVEVGYISDIWQYFWWRKPSL 436
           N I  H++    D  ++G+I  + QYFW  KP L
Sbjct: 34  NVITAHLIPHTHD--DLGWIKTVDQYFWGAKPEL 65


>Z68752-7|CAA92982.2|  693|Caenorhabditis elegans Hypothetical
           protein T12G3.1 protein.
          Length = 693

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
 Frame = -1

Query: 322 SSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPAPEVPSELS--VRAPCASLRTL 149
           +SATPAV AP+  + V    PI  T+ +       L P    P E++  V AP +   + 
Sbjct: 534 TSATPAVTAPASIVPVTPTAPIVETLIVP-----PLPPVESNPEEVTPMVTAPISIHSSF 588

Query: 148 ELVNSSGSS 122
           E ++S   S
Sbjct: 589 ENISSDFES 597


>U13644-7|AAM48536.2|  700|Caenorhabditis elegans Hypothetical
           protein F56D2.6b protein.
          Length = 700

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +1

Query: 106 TIFNTMRSLNY*QALESAGTRTELSRSTPMVPLVLELKYPLLVTTRI 246
           T+   +  LNY QA+   G  TEL       PL  +L   L+ +T +
Sbjct: 479 TLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTEL 525


>U13644-6|AAB52678.1|  739|Caenorhabditis elegans Hypothetical
           protein F56D2.6a protein.
          Length = 739

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +1

Query: 106 TIFNTMRSLNY*QALESAGTRTELSRSTPMVPLVLELKYPLLVTTRI 246
           T+   +  LNY QA+   G  TEL       PL  +L   L+ +T +
Sbjct: 479 TLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTEL 525


>Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical
           protein Y76A2B.1 protein.
          Length = 1057

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -1

Query: 385 TLSPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPI 257
           T+SP P   V    TP   T S +TP+V  P+F   V  + P+
Sbjct: 485 TISPEPVTIVKPASTP--ATDSVSTPSVVGPAFGKKVPEQPPV 525


>AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical
           protein Y76A2B.1 protein.
          Length = 1057

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -1

Query: 385 TLSPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPI 257
           T+SP P   V    TP   T S +TP+V  P+F   V  + P+
Sbjct: 485 TISPEPVTIVKPASTP--ATDSVSTPSVVGPAFGKKVPEQPPV 525


>AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.
          Length = 1057

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -1

Query: 385 TLSPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPI 257
           T+SP P   V    TP   T S +TP+V  P+F   V  + P+
Sbjct: 485 TISPEPVTIVKPASTP--ATDSVSTPSVVGPAFGKKVPEQPPV 525


>AC024805-3|AAK39338.1|  801|Caenorhabditis elegans Hypothetical
           protein Y51H7C.6a protein.
          Length = 801

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 78  RYLIVSEPVYYIQHYEEPELLTSSRVRRDAHGAL 179
           R L+ +EP+ +  +Y+   LLTSS + R    +L
Sbjct: 671 RLLVENEPLLFADNYQTLLLLTSSEIARQIEQSL 704


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,567,826
Number of Sequences: 27780
Number of extensions: 284022
Number of successful extensions: 834
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)