SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_A05
         (410 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88315-3|AAB42371.1|  657|Caenorhabditis elegans Heat shock prot...   220   3e-58
AF000264-1|AAC71123.1|  657|Caenorhabditis elegans Heat shock pr...   159   1e-39
U56965-1|AAB52671.1|  661|Caenorhabditis elegans Heat shock prot...   157   2e-39
M26604-1|AAA28074.1|  661|Caenorhabditis elegans protein ( C. el...   157   2e-39
M28528-1|AAA28076.1|  288|Caenorhabditis elegans protein ( C.ele...   157   4e-39
Z80223-1|CAB02319.1|  640|Caenorhabditis elegans Hypothetical pr...   155   1e-38
M18540-1|AAA28078.1|  640|Caenorhabditis elegans protein ( C.ele...   153   4e-38
Z83108-5|CAB05508.1|  645|Caenorhabditis elegans Hypothetical pr...   151   3e-37
Z83108-4|CAB05507.1|  645|Caenorhabditis elegans Hypothetical pr...   151   3e-37
Z81467-1|CAB03871.1|  643|Caenorhabditis elegans Hypothetical pr...   144   3e-35
X07678-1|CAA30525.1|  487|Caenorhabditis elegans hsp6F protein.       131   2e-31
Z81113-10|CAB54300.1|  607|Caenorhabditis elegans Hypothetical p...    70   8e-13
Z81059-7|CAB54217.1|  607|Caenorhabditis elegans Hypothetical pr...    70   8e-13
U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore co...    29   1.7  
AC024200-11|AAF36000.1|  271|Caenorhabditis elegans Hypothetical...    27   4.0  
AL110487-17|CAB54422.2|  135|Caenorhabditis elegans Hypothetical...    27   5.3  
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr...    26   9.2  
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr...    26   9.2  
Z70681-3|CAA94579.2|  403|Caenorhabditis elegans Hypothetical pr...    26   9.2  
AL117207-14|CAB60394.2|  333|Caenorhabditis elegans Hypothetical...    26   9.2  

>U88315-3|AAB42371.1|  657|Caenorhabditis elegans Heat shock protein
           protein 6 protein.
          Length = 657

 Score =  220 bits (538), Expect = 3e-58
 Identities = 107/116 (92%), Positives = 112/116 (96%)
 Frame = +1

Query: 1   VTPLSLGIETLGGVFTKLITRNTTIPTKKSQVFSTAADGQTQVEIKVHQGEREMATDNKL 180
           VTPLSLGIETLGG+ TKLITRNTTIPTKKSQVFSTAADGQTQV+IKV QGEREMAT NKL
Sbjct: 419 VTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKL 478

Query: 181 LGQFSLVGIPPAPRGVPQIEVCFDIDANGIVHVSARDKGTGKEQQIVIQSSGGLSK 348
           LGQFSLVGIPPAPRGVPQ+EV FDIDANGIV+VSARD+GTGKEQQIVIQSSGGLSK
Sbjct: 479 LGQFSLVGIPPAPRGVPQVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSSGGLSK 534



 Score = 29.1 bits (62), Expect = 1.3
 Identities = 12/21 (57%), Positives = 17/21 (80%)
 Frame = +2

Query: 347 RDEIENMVKAAEQFAATDKQR 409
           +D+IENM+K AE+ AA D +R
Sbjct: 534 KDQIENMIKEAEKNAAEDAKR 554


>AF000264-1|AAC71123.1|  657|Caenorhabditis elegans Heat shock
           protein protein 4 protein.
          Length = 657

 Score =  159 bits (385), Expect = 1e-39
 Identities = 74/108 (68%), Positives = 86/108 (79%)
 Frame = +1

Query: 1   VTPLSLGIETLGGVFTKLITRNTTIPTKKSQVFSTAADGQTQVEIKVHQGEREMATDNKL 180
           V PL+LGIET+GGV TKLI RNT IPTKKSQVFSTAAD Q+ V I +++GER M  DN  
Sbjct: 421 VNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHK 480

Query: 181 LGQFSLVGIPPAPRGVPQIEVCFDIDANGIVHVSARDKGTGKEQQIVI 324
           LG F + GIPPAPRGVPQIEV F+ID NGI+HVSA DKGTG + ++ I
Sbjct: 481 LGNFDVTGIPPAPRGVPQIEVTFEIDVNGILHVSAEDKGTGNKNKLTI 528


>U56965-1|AAB52671.1|  661|Caenorhabditis elegans Heat shock protein
           protein 3 protein.
          Length = 661

 Score =  157 bits (382), Expect = 2e-39
 Identities = 74/108 (68%), Positives = 86/108 (79%)
 Frame = +1

Query: 1   VTPLSLGIETLGGVFTKLITRNTTIPTKKSQVFSTAADGQTQVEIKVHQGEREMATDNKL 180
           V PL++GIET+GGV TKLI RNT IPTKKSQVFSTAAD Q  V I+V +GER M  DN  
Sbjct: 424 VNPLTMGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADNQPTVTIQVFEGERPMTKDNHQ 483

Query: 181 LGQFSLVGIPPAPRGVPQIEVCFDIDANGIVHVSARDKGTGKEQQIVI 324
           LG+F L G+PPAPRGVPQIEV F+ID NGI+HV+A DKGTG + +I I
Sbjct: 484 LGKFDLTGLPPAPRGVPQIEVTFEIDVNGILHVTAEDKGTGNKNKITI 531


>M26604-1|AAA28074.1|  661|Caenorhabditis elegans protein ( C.
           elegans BiP (hsp3)gene, complete cds. ).
          Length = 661

 Score =  157 bits (382), Expect = 2e-39
 Identities = 74/108 (68%), Positives = 86/108 (79%)
 Frame = +1

Query: 1   VTPLSLGIETLGGVFTKLITRNTTIPTKKSQVFSTAADGQTQVEIKVHQGEREMATDNKL 180
           V PL++GIET+GGV TKLI RNT IPTKKSQVFSTAAD Q  V I+V +GER M  DN  
Sbjct: 424 VNPLTMGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADNQPTVTIQVFEGERPMTKDNHQ 483

Query: 181 LGQFSLVGIPPAPRGVPQIEVCFDIDANGIVHVSARDKGTGKEQQIVI 324
           LG+F L G+PPAPRGVPQIEV F+ID NGI+HV+A DKGTG + +I I
Sbjct: 484 LGKFDLTGLPPAPRGVPQIEVTFEIDVNGILHVTAEDKGTGNKNKITI 531


>M28528-1|AAA28076.1|  288|Caenorhabditis elegans protein (
           C.elegans heat shockprotein 4 gene, 3' end. ).
          Length = 288

 Score =  157 bits (380), Expect = 4e-39
 Identities = 73/108 (67%), Positives = 85/108 (78%)
 Frame = +1

Query: 1   VTPLSLGIETLGGVFTKLITRNTTIPTKKSQVFSTAADGQTQVEIKVHQGEREMATDNKL 180
           V PL+LGIET+GGV TKLI RNT IPTKKSQVF TAAD Q+ V I +++GER M  DN  
Sbjct: 52  VNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFPTAADSQSAVSIVIYEGERPMVMDNHK 111

Query: 181 LGQFSLVGIPPAPRGVPQIEVCFDIDANGIVHVSARDKGTGKEQQIVI 324
           LG F + GIPPAPRGVPQIEV F+ID NGI+HVSA DKGTG + ++ I
Sbjct: 112 LGNFDVTGIPPAPRGVPQIEVTFEIDVNGILHVSAEDKGTGNKNKLTI 159


>Z80223-1|CAB02319.1|  640|Caenorhabditis elegans Hypothetical
           protein F26D10.3 protein.
          Length = 640

 Score =  155 bits (376), Expect = 1e-38
 Identities = 78/117 (66%), Positives = 89/117 (76%), Gaps = 1/117 (0%)
 Frame = +1

Query: 1   VTPLSLGIETLGGVFTKLITRNTTIPTKKSQVFSTAADGQTQVEIKVHQGEREMATDNKL 180
           V PLSLGIET GGV T LI RNTTIPTK +Q F+T +D Q  V I+V++GER M  DN L
Sbjct: 397 VAPLSLGIETAGGVMTALIKRNTTIPTKTAQTFTTYSDNQPGVLIQVYEGERAMTKDNNL 456

Query: 181 LGQFSLVGIPPAPRGVPQIEVCFDIDANGIVHVSARDKGTGKEQQIVI-QSSGGLSK 348
           LG+F L GIPPAPRGVPQIEV FDIDANGI++VSA DK TGK+ +I I    G LSK
Sbjct: 457 LGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSATDKSTGKQNKITITNDKGRLSK 513


>M18540-1|AAA28078.1|  640|Caenorhabditis elegans protein (
           C.elegans heat shockprotein 70A gene, complete cds. ).
          Length = 640

 Score =  153 bits (372), Expect = 4e-38
 Identities = 75/108 (69%), Positives = 85/108 (78%)
 Frame = +1

Query: 1   VTPLSLGIETLGGVFTKLITRNTTIPTKKSQVFSTAADGQTQVEIKVHQGEREMATDNKL 180
           V PLSLGIET GGV T LI RNTTIPTK +Q F+T +D Q  V I+V++GER M  DN L
Sbjct: 397 VAPLSLGIETAGGVMTALIKRNTTIPTKTAQTFTTYSDNQPGVLIQVYEGERAMTKDNNL 456

Query: 181 LGQFSLVGIPPAPRGVPQIEVCFDIDANGIVHVSARDKGTGKEQQIVI 324
           LG+F L GIPPAPRGVPQIEV FDIDANGI++VSA DK TGK +QI I
Sbjct: 457 LGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSATDKSTGKAKQITI 504


>Z83108-5|CAB05508.1|  645|Caenorhabditis elegans Hypothetical
           protein F44E5.5 protein.
          Length = 645

 Score =  151 bits (365), Expect = 3e-37
 Identities = 74/113 (65%), Positives = 83/113 (73%)
 Frame = +1

Query: 1   VTPLSLGIETLGGVFTKLITRNTTIPTKKSQVFSTAADGQTQVEIKVHQGEREMATDNKL 180
           V PLSLGIET GGV T LI RNT IPTK  + F+T AD Q  V I+V++GER M  DN  
Sbjct: 397 VAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHR 456

Query: 181 LGQFSLVGIPPAPRGVPQIEVCFDIDANGIVHVSARDKGTGKEQQIVIQSSGG 339
           LG F L GIPPAPRGVPQIEV FDIDANGI++VSA DK TGK  +I IQ+  G
Sbjct: 457 LGTFELSGIPPAPRGVPQIEVTFDIDANGILNVSAEDKSTGKSNRITIQNEKG 509


>Z83108-4|CAB05507.1|  645|Caenorhabditis elegans Hypothetical
           protein F44E5.4 protein.
          Length = 645

 Score =  151 bits (365), Expect = 3e-37
 Identities = 74/113 (65%), Positives = 83/113 (73%)
 Frame = +1

Query: 1   VTPLSLGIETLGGVFTKLITRNTTIPTKKSQVFSTAADGQTQVEIKVHQGEREMATDNKL 180
           V PLSLGIET GGV T LI RNT IPTK  + F+T AD Q  V I+V++GER M  DN  
Sbjct: 397 VAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHR 456

Query: 181 LGQFSLVGIPPAPRGVPQIEVCFDIDANGIVHVSARDKGTGKEQQIVIQSSGG 339
           LG F L GIPPAPRGVPQIEV FDIDANGI++VSA DK TGK  +I IQ+  G
Sbjct: 457 LGTFELSGIPPAPRGVPQIEVTFDIDANGILNVSAEDKSTGKSNRITIQNEKG 509


>Z81467-1|CAB03871.1|  643|Caenorhabditis elegans Hypothetical
           protein C12C8.1 protein.
          Length = 643

 Score =  144 bits (348), Expect = 3e-35
 Identities = 69/113 (61%), Positives = 82/113 (72%)
 Frame = +1

Query: 1   VTPLSLGIETLGGVFTKLITRNTTIPTKKSQVFSTAADGQTQVEIKVHQGEREMATDNKL 180
           V PLS GIET GGV T LI RNT IP K S+ F+T AD Q  V I+V++GER M  DN  
Sbjct: 397 VVPLSHGIETAGGVMTNLIDRNTRIPAKASKTFTTYADNQPGVSIQVYEGERAMTRDNHR 456

Query: 181 LGQFSLVGIPPAPRGVPQIEVCFDIDANGIVHVSARDKGTGKEQQIVIQSSGG 339
           LG F L GIPPAPRGVPQ++V FDIDANGI++VSA DK TG+  +I I++  G
Sbjct: 457 LGTFELTGIPPAPRGVPQVDVTFDIDANGILNVSAADKSTGRSNRITIRNEKG 509


>X07678-1|CAA30525.1|  487|Caenorhabditis elegans hsp6F protein.
          Length = 487

 Score =  131 bits (316), Expect = 2e-31
 Identities = 64/69 (92%), Positives = 66/69 (95%)
 Frame = +1

Query: 1   VTPLSLGIETLGGVFTKLITRNTTIPTKKSQVFSTAADGQTQVEIKVHQGEREMATDNKL 180
           VTPLSLGIETLGG+ TKLITRNTTIPTKKSQVFSTAADGQTQV+IKV QGEREMAT NKL
Sbjct: 419 VTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKL 478

Query: 181 LGQFSLVGI 207
           LGQFSLVGI
Sbjct: 479 LGQFSLVGI 487


>Z81113-10|CAB54300.1|  607|Caenorhabditis elegans Hypothetical
           protein F11F1.1 protein.
          Length = 607

 Score = 69.7 bits (163), Expect = 8e-13
 Identities = 34/102 (33%), Positives = 57/102 (55%)
 Frame = +1

Query: 1   VTPLSLGIETLGGVFTKLITRNTTIPTKKSQVFSTAADGQTQVEIKVHQGEREMATDNKL 180
           V P+S+G++      + LI + T  P  K + F  + D QT + + V++GER + + N+ 
Sbjct: 392 VIPMSIGVQCNRDYMSVLIKKGTVFPCTKRKTFINSDDFQTSINVPVYEGERVLCSHNRQ 451

Query: 181 LGQFSLVGIPPAPRGVPQIEVCFDIDANGIVHVSARDKGTGK 306
           LG+ SL  I P  RG   +++  ++D NGI+  +A D  T K
Sbjct: 452 LGEISL-PIQPKRRGESVVDITLEVDYNGILQATALDLNTKK 492


>Z81059-7|CAB54217.1|  607|Caenorhabditis elegans Hypothetical
           protein F11F1.1 protein.
          Length = 607

 Score = 69.7 bits (163), Expect = 8e-13
 Identities = 34/102 (33%), Positives = 57/102 (55%)
 Frame = +1

Query: 1   VTPLSLGIETLGGVFTKLITRNTTIPTKKSQVFSTAADGQTQVEIKVHQGEREMATDNKL 180
           V P+S+G++      + LI + T  P  K + F  + D QT + + V++GER + + N+ 
Sbjct: 392 VIPMSIGVQCNRDYMSVLIKKGTVFPCTKRKTFINSDDFQTSINVPVYEGERVLCSHNRQ 451

Query: 181 LGQFSLVGIPPAPRGVPQIEVCFDIDANGIVHVSARDKGTGK 306
           LG+ SL  I P  RG   +++  ++D NGI+  +A D  T K
Sbjct: 452 LGEISL-PIQPKRRGESVVDITLEVDYNGILQATALDLNTKK 492


>U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore
           complex protein protein7 protein.
          Length = 1217

 Score = 28.7 bits (61), Expect = 1.7
 Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 7/66 (10%)
 Frame = -1

Query: 272 TMPFASMSKQTSIWGTPRGAGGIPTSENCPSSLLSVAISRSPWCTLIST-------WVCP 114
           T+PF S S    ++G P+     PT+      +    I+ +P   + S+       W CP
Sbjct: 618 TIPFGSGSSVAPLFGAPKTTAPPPTTVPATIPVAPTTIASAPVAAVTSSSNGTRVDWECP 677

Query: 113 SAAVEN 96
              V N
Sbjct: 678 DCMVSN 683


>AC024200-11|AAF36000.1|  271|Caenorhabditis elegans Hypothetical
           protein Y71F9AL.6 protein.
          Length = 271

 Score = 27.5 bits (58), Expect = 4.0
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = -1

Query: 290 SRADTWTMPFASMSKQTSIW-GTPRGAGGIPTSENCPSSLLSVAIS 156
           SR   W   +   SK  SI  GTP     +P   + P SLL +AIS
Sbjct: 90  SRDGRW---YTGTSKTLSIVVGTPESTSSLPVPLSLPHSLLDMAIS 132


>AL110487-17|CAB54422.2|  135|Caenorhabditis elegans Hypothetical
           protein Y39E4B.13 protein.
          Length = 135

 Score = 27.1 bits (57), Expect = 5.3
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = +1

Query: 88  SQVFSTAADGQTQVEIKVHQGEREMATDNKLLGQFSLVGIPPAPRGVP 231
           +Q  +  ++ +T  +I+  Q E+    D K+  + +  G PP P   P
Sbjct: 71  NQPLADKSEERTMADIESIQSEKVQIRDKKMKSKLAAPGAPPKPAQSP 118


>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical
           protein T04F3.1 protein.
          Length = 3517

 Score = 26.2 bits (55), Expect = 9.2
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +1

Query: 142 HQGEREMATD-NKLLGQFSLVGIPPAPRGVPQIEVC 246
           H  ER+ + D  +     S++GIPPA   + QI +C
Sbjct: 683 HNEERKASRDLRRRASDSSMIGIPPADIDLNQIFLC 718


>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical
           protein T04F3.1 protein.
          Length = 3517

 Score = 26.2 bits (55), Expect = 9.2
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +1

Query: 142 HQGEREMATD-NKLLGQFSLVGIPPAPRGVPQIEVC 246
           H  ER+ + D  +     S++GIPPA   + QI +C
Sbjct: 683 HNEERKASRDLRRRASDSSMIGIPPADIDLNQIFLC 718


>Z70681-3|CAA94579.2|  403|Caenorhabditis elegans Hypothetical
           protein C30F2.3 protein.
          Length = 403

 Score = 26.2 bits (55), Expect = 9.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -1

Query: 209 GIPTSENCPSSLLSVAISRSPWCTLISTWVC 117
           GI T ++CPS + S+  S +  CT +    C
Sbjct: 371 GISTQQSCPSLIASLTESYNGCCTAVRAAGC 401


>AL117207-14|CAB60394.2|  333|Caenorhabditis elegans Hypothetical
           protein Y60A3A.6 protein.
          Length = 333

 Score = 26.2 bits (55), Expect = 9.2
 Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +1

Query: 223 GVP-QIEVCFDIDANGIVHVSARDKGTGKEQQIVIQSSGGLS 345
           G+P  ++V   +   G++ VS       +  Q++I SSGG+S
Sbjct: 91  GIPTSVQVYIGVSCVGVIGVSVLIFFESRYHQLIIGSSGGIS 132


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.315    0.133    0.378 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,791,013
Number of Sequences: 27780
Number of extensions: 149665
Number of successful extensions: 376
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 376
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 662437636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)

- SilkBase 1999-2023 -