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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_A20
         (844 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z50797-1|CAA90671.1|  206|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z54236-7|CAA90982.1| 1471|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z69360-4|CAC42291.2|  732|Caenorhabditis elegans Hypothetical pr...    29   5.5  
Z69360-3|CAA93286.2|  369|Caenorhabditis elegans Hypothetical pr...    29   5.5  
Z69360-2|CAA93285.2|  780|Caenorhabditis elegans Hypothetical pr...    29   5.5  
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    29   5.5  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    29   5.5  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    29   5.5  
Z81094-5|CAB03149.2|  675|Caenorhabditis elegans Hypothetical pr...    28   7.2  
AF536544-1|AAN77185.1|  675|Caenorhabditis elegans SR-related CT...    28   7.2  
AF000263-12|AAO21392.1|  838|Caenorhabditis elegans Hypothetical...    28   7.2  
AF000263-11|AAL77184.1|  866|Caenorhabditis elegans Hypothetical...    28   7.2  
AF000263-10|AAM22070.1|  163|Caenorhabditis elegans Hypothetical...    28   7.2  
AF000263-9|AAO21391.2|  184|Caenorhabditis elegans Hypothetical ...    28   7.2  
AF000263-8|AAK21461.1|  924|Caenorhabditis elegans Hypothetical ...    28   7.2  
AF000263-7|AAK21463.1|  925|Caenorhabditis elegans Hypothetical ...    28   7.2  
Z84574-5|CAB06541.1|  846|Caenorhabditis elegans Hypothetical pr...    28   9.5  
U40800-4|AAO91742.1|  763|Caenorhabditis elegans Hypothetical pr...    28   9.5  

>Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical
           protein F28D9.1 protein.
          Length = 601

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = +1

Query: 271 RSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRRS 372
           R R   S+  +P+P RRR  SP + P   RRRRS
Sbjct: 438 RRRRSPSQSKSPAPRRRR--SPSKSPQAPRRRRS 469


>Z50797-1|CAA90671.1|  206|Caenorhabditis elegans Hypothetical
           protein T22H6.1 protein.
          Length = 206

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
 Frame = -3

Query: 365 LRLQVPGWRPGEQARRLEGD------GAVSSDRPDRDRALRTSQRRCKSHYPMTY 219
           LRLQV G + GEQ  +  G         +S++ P RDRAL      CK  Y + Y
Sbjct: 77  LRLQVKGLKHGEQITKSSGKCNSKKLDTISAETPLRDRAL------CKFEYVLNY 125


>Z54236-7|CAA90982.1| 1471|Caenorhabditis elegans Hypothetical
           protein C27B7.7 protein.
          Length = 1471

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = +3

Query: 405 SRGEGRPSEGVVRARRLHSRRSVLEAWSRRLADPSAGL 518
           +RG+ RPS  V  + R ++ +  ++ WSR  A  SAG+
Sbjct: 469 ARGKPRPSISVAISDRKNASQVEVDVWSRLQATSSAGI 506


>Z69360-4|CAC42291.2|  732|Caenorhabditis elegans Hypothetical
           protein F25H8.5c protein.
          Length = 732

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 19/54 (35%), Positives = 24/54 (44%)
 Frame = -3

Query: 548 ENRADRLDGSEAGRRVCQAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATP 387
           E RA R +     R  C+  RP+   GPP   PPR+N      P PP  +   P
Sbjct: 68  EERA-RAEADARRRERCRNRRPQPTPGPP---PPRNNCLPPPGPPPPCQQYQQP 117


>Z69360-3|CAA93286.2|  369|Caenorhabditis elegans Hypothetical
           protein F25H8.5b protein.
          Length = 369

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 19/54 (35%), Positives = 24/54 (44%)
 Frame = -3

Query: 548 ENRADRLDGSEAGRRVCQAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATP 387
           E RA R +     R  C+  RP+   GPP   PPR+N      P PP  +   P
Sbjct: 68  EERA-RAEADARRRERCRNRRPQPTPGPP---PPRNNCLPPPGPPPPCQQYQQP 117


>Z69360-2|CAA93285.2|  780|Caenorhabditis elegans Hypothetical
           protein F25H8.5a protein.
          Length = 780

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 19/54 (35%), Positives = 24/54 (44%)
 Frame = -3

Query: 548 ENRADRLDGSEAGRRVCQAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATP 387
           E RA R +     R  C+  RP+   GPP   PPR+N      P PP  +   P
Sbjct: 68  EERA-RAEADARRRERCRNRRPQPTPGPP---PPRNNCLPPPGPPPPCQQYQQP 117


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 16/50 (32%), Positives = 18/50 (36%)
 Frame = -3

Query: 485 PRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATPPVIGSERLRLQVPGWRP 336
           P +  GPP   PP       G P PP      PP+ G        PG  P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 16/50 (32%), Positives = 18/50 (36%)
 Frame = -3

Query: 485 PRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATPPVIGSERLRLQVPGWRP 336
           P +  GPP   PP       G P PP      PP+ G        PG  P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 16/50 (32%), Positives = 18/50 (36%)
 Frame = -3

Query: 485 PRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATPPVIGSERLRLQVPGWRP 336
           P +  GPP   PP       G P PP      PP+ G        PG  P
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 352


>Z81094-5|CAB03149.2|  675|Caenorhabditis elegans Hypothetical
           protein F58G11.5 protein.
          Length = 675

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = +1

Query: 274 SRSGRSEDTAPSPSRRRACSPGRHPGTWRRRRSLPITGGVATSALGGKGAPAKV*FERG 450
           S + RS   +P    +R+ SP R P   RR+RS   +   + S+     +  K   ERG
Sbjct: 514 SEARRSNSRSPPRDHKRSRSPSRSPSPRRRQRSSSNSSRSSGSSSRSSSSSRKSSPERG 572


>AF536544-1|AAN77185.1|  675|Caenorhabditis elegans SR-related CTD
           associated factor 6 protein.
          Length = 675

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = +1

Query: 274 SRSGRSEDTAPSPSRRRACSPGRHPGTWRRRRSLPITGGVATSALGGKGAPAKV*FERG 450
           S + RS   +P    +R+ SP R P   RR+RS   +   + S+     +  K   ERG
Sbjct: 514 SEARRSNSRSPPRDHKRSRSPSRSPSPRRRQRSSSNSSRSSGSSSRSSSSSRKSSPERG 572


>AF000263-12|AAO21392.1|  838|Caenorhabditis elegans Hypothetical
           protein T08B2.5f protein.
          Length = 838

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 19/41 (46%), Positives = 20/41 (48%)
 Frame = +1

Query: 247 RRCDVRSARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRR 369
           RR   RS   R GRS     SPSRRR     R   + RRRR
Sbjct: 31  RRSRSRSRDRRGGRSRSR--SPSRRRTSRDRRDDRSSRRRR 69


>AF000263-11|AAL77184.1|  866|Caenorhabditis elegans Hypothetical
           protein T08B2.5c protein.
          Length = 866

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 19/41 (46%), Positives = 20/41 (48%)
 Frame = +1

Query: 247 RRCDVRSARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRR 369
           RR   RS   R GRS     SPSRRR     R   + RRRR
Sbjct: 59  RRSRSRSRDRRGGRSRSR--SPSRRRTSRDRRDDRSSRRRR 97


>AF000263-10|AAM22070.1|  163|Caenorhabditis elegans Hypothetical
           protein T08B2.5d protein.
          Length = 163

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 19/41 (46%), Positives = 20/41 (48%)
 Frame = +1

Query: 247 RRCDVRSARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRR 369
           RR   RS   R GRS     SPSRRR     R   + RRRR
Sbjct: 117 RRSRSRSRDRRGGRSRSR--SPSRRRTSRDRRDDRSSRRRR 155


>AF000263-9|AAO21391.2|  184|Caenorhabditis elegans Hypothetical
           protein T08B2.5e protein.
          Length = 184

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 19/41 (46%), Positives = 20/41 (48%)
 Frame = +1

Query: 247 RRCDVRSARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRR 369
           RR   RS   R GRS     SPSRRR     R   + RRRR
Sbjct: 138 RRSRSRSRDRRGGRSRSR--SPSRRRTSRDRRDDRSSRRRR 176


>AF000263-8|AAK21461.1|  924|Caenorhabditis elegans Hypothetical
           protein T08B2.5a protein.
          Length = 924

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 19/41 (46%), Positives = 20/41 (48%)
 Frame = +1

Query: 247 RRCDVRSARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRR 369
           RR   RS   R GRS     SPSRRR     R   + RRRR
Sbjct: 117 RRSRSRSRDRRGGRSRSR--SPSRRRTSRDRRDDRSSRRRR 155


>AF000263-7|AAK21463.1|  925|Caenorhabditis elegans Hypothetical
           protein T08B2.5b protein.
          Length = 925

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 19/41 (46%), Positives = 20/41 (48%)
 Frame = +1

Query: 247 RRCDVRSARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRR 369
           RR   RS   R GRS     SPSRRR     R   + RRRR
Sbjct: 118 RRSRSRSRDRRGGRSRSR--SPSRRRTSRDRRDDRSSRRRR 156


>Z84574-5|CAB06541.1|  846|Caenorhabditis elegans Hypothetical
           protein F33E2.6 protein.
          Length = 846

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 27/84 (32%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
 Frame = -3

Query: 467 PPRVEPPRSNYTFAGAPFPPRAEVATPPVIGSERLRLQVPGWRP--GEQARRLEGDGAVS 294
           PPR EPP+   T A    PP+ E     V  +   R +VP   P   EQ R       VS
Sbjct: 660 PPRTEPPK---TEAPRTVPPKTEAPMTEVPMTGPSRTEVPMTEPPKTEQPRTAPPRTEVS 716

Query: 293 SDRPDRDRALRTSQRRCKSHYPMT 222
              P      +T   R  +  PMT
Sbjct: 717 MTLPPETVPPKTEAPR--TEVPMT 738


>U40800-4|AAO91742.1|  763|Caenorhabditis elegans Hypothetical
           protein D2096.12 protein.
          Length = 763

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 5/86 (5%)
 Frame = -3

Query: 590 PEGEASVVAAHPVRENRADRLDGSEAGRRVCQAARPRLQHGPPRVEPPRSNYTFAGAPFP 411
           P+ + S     P +    + L  S +  +  +A  P +Q  PP   PP+  +    +  P
Sbjct: 43  PDSDDSFETFAPTQTTTGNSLKSSASSTQSTEAKPPPVQFPPPSKNPPKHVHQQNVSKSP 102

Query: 410 -----PRAEVATPPVIGSERLRLQVP 348
                PR +V T P I + +   Q P
Sbjct: 103 LIPQLPRNQVPTRPQINTVQSVQQKP 128


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,595,042
Number of Sequences: 27780
Number of extensions: 302817
Number of successful extensions: 1144
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1133
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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