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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_A14
         (843 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L23648-3|AAN63386.1|  438|Caenorhabditis elegans Cyclin t protei...    84   1e-16
L23648-1|AAA28034.1|  468|Caenorhabditis elegans Cyclin t protei...    84   1e-16
Z83226-1|CAB05724.2|  252|Caenorhabditis elegans Hypothetical pr...    73   2e-13
Z78012-6|CAB01416.1|  480|Caenorhabditis elegans Hypothetical pr...    60   2e-09
AY557405-1|AAS64750.1|  480|Caenorhabditis elegans cyclin L prot...    60   2e-09
L23648-4|AAA28033.2|  555|Caenorhabditis elegans Cyclin t protei...    58   1e-08
L23648-5|AAN63385.1|  381|Caenorhabditis elegans Cyclin t protei...    34   0.15 
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AB009362-1|BAA23766.1|  118|Caenorhabditis elegans protein ( Cae...    29   3.1  
U41993-8|AAA83449.1|  497|Caenorhabditis elegans Temporarily ass...    29   5.5  
U41993-7|AAA83450.2|  733|Caenorhabditis elegans Temporarily ass...    29   5.5  
Z93383-3|CAB07625.1|  309|Caenorhabditis elegans Hypothetical pr...    28   9.5  
U64853-3|AAB04976.1|  565|Caenorhabditis elegans Hypothetical pr...    28   9.5  

>L23648-3|AAN63386.1|  438|Caenorhabditis elegans Cyclin t protein
           1.1, isoform b protein.
          Length = 438

 Score = 84.2 bits (199), Expect = 1e-16
 Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
 Frame = +2

Query: 32  KWYFTKEQLQNSPSRKCGLDADKELAYRQQAANLIQDM--------GQRLQVSQLCINTA 187
           KW FTKE+++ + S + G+  ++ELA RQ AA  IQ+M          ++++    +  A
Sbjct: 19  KWLFTKEEMKKTASIQEGMSREEELASRQMAAAFIQEMIDGLNNVKDPKMKIGHTGLCVA 78

Query: 188 IVYMHRFYAFHSFTQFHRNXXXXXXXXXXXKVEEQPRKLEYVIKVAHVCLHRGEGVNALT 367
             +MHRFY  HSF ++              K +E PRKL +VI V      R +     T
Sbjct: 79  HTHMHRFYYLHSFKKYDYRDVGAACVFLAGKSQECPRKLSHVISVWR---ERKDRKQLTT 135

Query: 368 PEQYQEQAQDLVFNENVLLQTLGFDVAIDHPHTHVV 475
                E AQ +V  E+++LQT+ FD+ +  PH +V+
Sbjct: 136 ETARNEAAQIIVLLESMILQTIAFDLNVHLPHIYVL 171



 Score = 28.7 bits (61), Expect = 5.5
 Identities = 16/78 (20%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
 Frame = +3

Query: 471 LCERVTLXKATKDLAQTSYFMASNSLHLTTMCLQYXPTVVACFCIHLASKWSNWLIPQSY 650
           + ++V   +  + L   +Y+ A++ + +T   L+Y    ++   IHL + ++N  I + +
Sbjct: 173 IMKKVDKKEHYRPLTSCAYYFATDVIAVTDWSLRYSAASMSIVIIHLMAAYANVRIERLF 232

Query: 651 -----EGRHWFSYVDKTV 689
                E   W++  D+T+
Sbjct: 233 ADFINEDSPWYAKFDETM 250


>L23648-1|AAA28034.1|  468|Caenorhabditis elegans Cyclin t protein
           1.1, isoform a protein.
          Length = 468

 Score = 84.2 bits (199), Expect = 1e-16
 Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
 Frame = +2

Query: 32  KWYFTKEQLQNSPSRKCGLDADKELAYRQQAANLIQDM--------GQRLQVSQLCINTA 187
           KW FTKE+++ + S + G+  ++ELA RQ AA  IQ+M          ++++    +  A
Sbjct: 19  KWLFTKEEMKKTASIQEGMSREEELASRQMAAAFIQEMIDGLNNVKDPKMKIGHTGLCVA 78

Query: 188 IVYMHRFYAFHSFTQFHRNXXXXXXXXXXXKVEEQPRKLEYVIKVAHVCLHRGEGVNALT 367
             +MHRFY  HSF ++              K +E PRKL +VI V      R +     T
Sbjct: 79  HTHMHRFYYLHSFKKYDYRDVGAACVFLAGKSQECPRKLSHVISVWR---ERKDRKQLTT 135

Query: 368 PEQYQEQAQDLVFNENVLLQTLGFDVAIDHPHTHVV 475
                E AQ +V  E+++LQT+ FD+ +  PH +V+
Sbjct: 136 ETARNEAAQIIVLLESMILQTIAFDLNVHLPHIYVL 171



 Score = 28.7 bits (61), Expect = 5.5
 Identities = 16/78 (20%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
 Frame = +3

Query: 471 LCERVTLXKATKDLAQTSYFMASNSLHLTTMCLQYXPTVVACFCIHLASKWSNWLIPQSY 650
           + ++V   +  + L   +Y+ A++ + +T   L+Y    ++   IHL + ++N  I + +
Sbjct: 173 IMKKVDKKEHYRPLTSCAYYFATDVIAVTDWSLRYSAASMSIVIIHLMAAYANVRIERLF 232

Query: 651 -----EGRHWFSYVDKTV 689
                E   W++  D+T+
Sbjct: 233 ADFINEDSPWYAKFDETM 250


>Z83226-1|CAB05724.2|  252|Caenorhabditis elegans Hypothetical
           protein F43D2.1 protein.
          Length = 252

 Score = 73.3 bits (172), Expect = 2e-13
 Identities = 46/144 (31%), Positives = 70/144 (48%), Gaps = 1/144 (0%)
 Frame = +2

Query: 35  WYFTKEQLQNSPSRKCGLDADKELAYRQQAANLIQDMGQRLQVS-QLCINTAIVYMHRFY 211
           W +  E L+ +PS + GL  ++EL +R++   L+ ++G  L    +  I  A VY HRFY
Sbjct: 4   WIWPLEALKTTPSIRAGLTKEQELLWRREGIKLLSEVGNALNCKPRPTIGVAAVYFHRFY 63

Query: 212 AFHSFTQFHRNXXXXXXXXXXXKVEEQPRKLEYVIKVAHVCLHRGEGVNALTPEQYQEQA 391
             HSF  F R            KVE+ P+K + V + A    H  E        +YQ   
Sbjct: 64  MIHSFQSFSREVTALSCLFLAGKVEDFPKKCKDVCQAA--VTHYPE-----IYSKYQNLV 116

Query: 392 QDLVFNENVLLQTLGFDVAIDHPH 463
            D++  E VLL +L FD+ +  P+
Sbjct: 117 DDVMGLERVLLHSLKFDLHVALPY 140


>Z78012-6|CAB01416.1|  480|Caenorhabditis elegans Hypothetical
           protein C52E4.6a protein.
          Length = 480

 Score = 60.1 bits (139), Expect = 2e-09
 Identities = 49/173 (28%), Positives = 70/173 (40%), Gaps = 20/173 (11%)
 Frame = +2

Query: 29  EKWYFTKEQ-----LQNSPSRKCGLDADKELAYRQQAANLIQDMGQRLQVSQLCINTAIV 193
           +KW  T ++     + N PS   GL  + E   R     LIQ     L++ Q    T  +
Sbjct: 73  DKWLMTLDEESRLKIDNPPSLVDGLSKETESELRYLGCELIQQGAILLKLPQTAAATGQI 132

Query: 194 YMHRFYAFHSFTQFHRNXXXXXXXXXXXKVEEQPRKLEYVIKVAHVC--LHR----GEGV 355
              R+Y   SF ++H             K+EE+PR+   V  V H    LHR    G  +
Sbjct: 133 LFQRYYYQKSFVRYHFEHAVQACLLLASKIEEEPRRPREVYNVFHRLERLHRLQQSGHDI 192

Query: 356 NALTPE---------QYQEQAQDLVFNENVLLQTLGFDVAIDHPHTHVVRTCH 487
           N  T            Y    Q ++ +E  +L TLGF V + HPH  +V   H
Sbjct: 193 NKETTRGMKPPAVDMNYINTKQHMINSERRILATLGFVVHVKHPHRLIVAYGH 245



 Score = 33.1 bits (72), Expect = 0.25
 Identities = 18/64 (28%), Positives = 31/64 (48%)
 Frame = +3

Query: 489 LXKATKDLAQTSYFMASNSLHLTTMCLQYXPTVVACFCIHLASKWSNWLIPQSYEGRHWF 668
           + ++  D+ Q S+   ++ L  T + ++Y P  +AC CI LA++     I       HWF
Sbjct: 249 ITQSRPDILQRSWNYMNDGLR-TDIFMRYKPETIACACIFLAARTVENPIALPSTPFHWF 307

Query: 669 SYVD 680
              D
Sbjct: 308 EAFD 311


>AY557405-1|AAS64750.1|  480|Caenorhabditis elegans cyclin L
           protein.
          Length = 480

 Score = 60.1 bits (139), Expect = 2e-09
 Identities = 49/173 (28%), Positives = 70/173 (40%), Gaps = 20/173 (11%)
 Frame = +2

Query: 29  EKWYFTKEQ-----LQNSPSRKCGLDADKELAYRQQAANLIQDMGQRLQVSQLCINTAIV 193
           +KW  T ++     + N PS   GL  + E   R     LIQ     L++ Q    T  +
Sbjct: 73  DKWLMTLDEESRLKIDNPPSLVDGLSKETESELRYLGCELIQQGAILLKLPQTAAATGQI 132

Query: 194 YMHRFYAFHSFTQFHRNXXXXXXXXXXXKVEEQPRKLEYVIKVAHVC--LHR----GEGV 355
              R+Y   SF ++H             K+EE+PR+   V  V H    LHR    G  +
Sbjct: 133 LFQRYYYQKSFVRYHFEHAVQACLLLASKIEEEPRRPREVYNVFHRLERLHRLQQSGHDI 192

Query: 356 NALTPE---------QYQEQAQDLVFNENVLLQTLGFDVAIDHPHTHVVRTCH 487
           N  T            Y    Q ++ +E  +L TLGF V + HPH  +V   H
Sbjct: 193 NKETTRGMKPPAVDMNYINTKQHMINSERRILATLGFVVHVKHPHRLIVAYGH 245



 Score = 33.1 bits (72), Expect = 0.25
 Identities = 18/64 (28%), Positives = 31/64 (48%)
 Frame = +3

Query: 489 LXKATKDLAQTSYFMASNSLHLTTMCLQYXPTVVACFCIHLASKWSNWLIPQSYEGRHWF 668
           + ++  D+ Q S+   ++ L  T + ++Y P  +AC CI LA++     I       HWF
Sbjct: 249 ITQSRPDILQRSWNYMNDGLR-TDIFMRYKPETIACACIFLAARTVENPIALPSTPFHWF 307

Query: 669 SYVD 680
              D
Sbjct: 308 EAFD 311


>L23648-4|AAA28033.2|  555|Caenorhabditis elegans Cyclin t protein
           1.2, isoform a protein.
          Length = 555

 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 37/147 (25%), Positives = 70/147 (47%), Gaps = 3/147 (2%)
 Frame = +2

Query: 47  KEQLQNSPSRKCGLDADKELAYRQQAANLIQDMGQRL---QVSQLCINTAIVYMHRFYAF 217
           ++ L ++PSR+ G+  ++EL+ RQQ    I D+  +L   +        A    +RF+  
Sbjct: 28  QDMLADTPSRREGMTYEEELSKRQQGGVFIFDIAMQLTHGKGEHGLSGVAATLFNRFFNV 87

Query: 218 HSFTQFHRNXXXXXXXXXXXKVEEQPRKLEYVIKVAHVCLHRGEGVNALTPEQYQEQAQD 397
           HS  +               K E+ P+KL+YV+       +        + + + +Q   
Sbjct: 88  HSLKRCDFRDVAAACVFLAGKNEDAPKKLKYVVTQLWQFKYP-HNKQFQSEQHFLDQCNV 146

Query: 398 LVFNENVLLQTLGFDVAIDHPHTHVVR 478
           +   E+VLL+T+ FD+ +D PH +V++
Sbjct: 147 VTLIEDVLLKTISFDINVDLPHQYVLK 173



 Score = 33.9 bits (74), Expect = 0.15
 Identities = 13/42 (30%), Positives = 28/42 (66%)
 Frame = +3

Query: 504 KDLAQTSYFMASNSLHLTTMCLQYXPTVVACFCIHLASKWSN 629
           KD+ +T+Y+MA++ L +T   ++Y    +A  C+++A+ + N
Sbjct: 186 KDMVKTAYYMATDVLIITDWSVRYSCASIATACVNIAAFFHN 227


>L23648-5|AAN63385.1|  381|Caenorhabditis elegans Cyclin t protein
           1.2, isoform b protein.
          Length = 381

 Score = 33.9 bits (74), Expect = 0.15
 Identities = 13/42 (30%), Positives = 28/42 (66%)
 Frame = +3

Query: 504 KDLAQTSYFMASNSLHLTTMCLQYXPTVVACFCIHLASKWSN 629
           KD+ +T+Y+MA++ L +T   ++Y    +A  C+++A+ + N
Sbjct: 12  KDMVKTAYYMATDVLIITDWSVRYSCASIATACVNIAAFFHN 53


>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical
           protein R10E11.1b protein.
          Length = 2056

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +1

Query: 391 AGPCVQRERSATDIRFRCSDRPPPHARC 474
           A  C QRE+   D  F   ++PPPHA C
Sbjct: 416 AHKCSQREKENRD--FAAKNQPPPHAAC 441


>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical
           protein R10E11.1a protein.
          Length = 2045

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +1

Query: 391 AGPCVQRERSATDIRFRCSDRPPPHARC 474
           A  C QRE+   D  F   ++PPPHA C
Sbjct: 416 AHKCSQREKENRD--FAAKNQPPPHAAC 441


>AB009362-1|BAA23766.1|  118|Caenorhabditis elegans protein (
           Caenorhabditis elegansmRNA, partial cds. ).
          Length = 118

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +1

Query: 391 AGPCVQRERSATDIRFRCSDRPPPHARC 474
           A  C QRE+   D  F   ++PPPHA C
Sbjct: 20  AHKCSQREKENRD--FAAKNQPPPHAAC 45


>U41993-8|AAA83449.1|  497|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 153, isoform a protein.
          Length = 497

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 12/35 (34%), Positives = 23/35 (65%)
 Frame = +2

Query: 341 RGEGVNALTPEQYQEQAQDLVFNENVLLQTLGFDV 445
           +   +NA T +  +E+ +D + NEN+ + T+GFD+
Sbjct: 150 KNRAINANT-DLTEEKLRDKIKNENIEMMTIGFDL 183


>U41993-7|AAA83450.2|  733|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 153, isoform b protein.
          Length = 733

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 12/35 (34%), Positives = 23/35 (65%)
 Frame = +2

Query: 341 RGEGVNALTPEQYQEQAQDLVFNENVLLQTLGFDV 445
           +   +NA T +  +E+ +D + NEN+ + T+GFD+
Sbjct: 386 KNRAINANT-DLTEEKLRDKIKNENIEMMTIGFDL 419


>Z93383-3|CAB07625.1|  309|Caenorhabditis elegans Hypothetical
           protein F54B8.3 protein.
          Length = 309

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +1

Query: 427 DIRFRCSDRPPPHARCANVSPX*KRPKIWLKHHILWHQTV 546
           DI F CSD      R A +    K  +I LKH +L  + +
Sbjct: 172 DIGFSCSDMTDQFPRIAQLDQYKKAKRIRLKHFVLKEEQI 211


>U64853-3|AAB04976.1|  565|Caenorhabditis elegans Hypothetical
           protein K11G9.1 protein.
          Length = 565

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 20/66 (30%), Positives = 27/66 (40%)
 Frame = +1

Query: 163 LSTMYQHGDSVHASVLRLPFVHTVSQECHSCSSFVPGCEGGRAAKEAGICYKSGPRMPPQ 342
           L  +Y+HGD      L +P+    + E       VP  +      E   C K GPR PP 
Sbjct: 25  LGNLYRHGDKEVHGYLGMPYAKPPTGEMRFAKP-VPADDW----TETRDCTKYGPRCPPS 79

Query: 343 R*GGER 360
             G E+
Sbjct: 80  GQGLEK 85


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,572,798
Number of Sequences: 27780
Number of extensions: 408148
Number of successful extensions: 1078
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1069
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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