Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00006
(654 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 27 0.16
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 27 0.16
EF032397-1|ABM97933.1| 200|Apis mellifera arginine kinase protein. 24 1.5
AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein. 24 1.5
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 22 4.5
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 22 4.5
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 4.5
L10433-1|AAA27732.1| 149|Apis mellifera transposase protein. 22 6.0
L10430-1|AAA27731.1| 150|Apis mellifera transposase protein. 22 6.0
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 22 6.0
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 22 6.0
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 6.0
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 27.1 bits (57), Expect = 0.16
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -1
Query: 243 SFLKCSFTFCYYITINF*ILNSHWFIIEWKSLH 145
S+L C + Y++ + F I+ S+WFII+ + H
Sbjct: 215 SYLVCYGIWVYFVPL-FLIIYSYWFIIQAVAAH 246
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 27.1 bits (57), Expect = 0.16
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -1
Query: 243 SFLKCSFTFCYYITINF*ILNSHWFIIEWKSLH 145
S+L C + Y++ + F I+ S+WFII+ + H
Sbjct: 91 SYLVCYGIWVYFVPL-FLIIYSYWFIIQAVAAH 122
>EF032397-1|ABM97933.1| 200|Apis mellifera arginine kinase protein.
Length = 200
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/58 (20%), Positives = 29/58 (50%)
Frame = +1
Query: 139 RSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKRPSYLKVLMMGRKRKTKILAD 312
RS++G+PF QY +++ + + G E + ++ + M ++ + K++ D
Sbjct: 112 RSLEGYPFNPCLTEAQYKEMEEKVSSTLSGL--EGELKGTFYPLTGMSKETQQKLIDD 167
>AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein.
Length = 355
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/58 (20%), Positives = 29/58 (50%)
Frame = +1
Query: 139 RSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKRPSYLKVLMMGRKRKTKILAD 312
RS++G+PF QY +++ + + G E + ++ + M ++ + K++ D
Sbjct: 128 RSLEGYPFNPCLTEAQYKEMEEKVSSTLSGL--EGELKGTFYPLTGMSKETQQKLIDD 183
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/21 (33%), Positives = 15/21 (71%)
Frame = -3
Query: 439 NNIDNIISEVSSGRFVKNRIW 377
+NI ++++ G+FV++ IW
Sbjct: 78 SNIAPYLNQIYGGQFVRDLIW 98
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +3
Query: 336 AGILNNVNAEQPPNQILFLTN 398
+G++NNV + PP ++F N
Sbjct: 138 SGLINNVRSVCPPQLLVFDLN 158
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.2 bits (45), Expect = 4.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 362 GTTSQPNSVLDKPSR*NFRD 421
GT+S NS++ K NFRD
Sbjct: 930 GTSSPTNSLVGKTVAVNFRD 949
>L10433-1|AAA27732.1| 149|Apis mellifera transposase protein.
Length = 149
Score = 21.8 bits (44), Expect = 6.0
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -1
Query: 384 EFGWEVVPH 358
E GW+V+PH
Sbjct: 139 ELGWDVLPH 147
>L10430-1|AAA27731.1| 150|Apis mellifera transposase protein.
Length = 150
Score = 21.8 bits (44), Expect = 6.0
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -1
Query: 384 EFGWEVVPH 358
E GW+V+PH
Sbjct: 140 ELGWDVLPH 148
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 21.8 bits (44), Expect = 6.0
Identities = 5/9 (55%), Positives = 6/9 (66%)
Frame = +2
Query: 314 YWAWYPWCW 340
+W YPW W
Sbjct: 94 FWQQYPWQW 102
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 21.8 bits (44), Expect = 6.0
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -1
Query: 384 EFGWEVVPH 358
E GW+V+PH
Sbjct: 261 ELGWDVLPH 269
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 495 AFVELEMKCNLQQLKKH 545
AFV++ + CN LK H
Sbjct: 34 AFVDVTLACNEASLKAH 50
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,050
Number of Sequences: 438
Number of extensions: 3641
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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