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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0023X.Seq
         (452 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    22   2.7  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    22   2.7  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   3.6  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    21   6.3  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    21   6.3  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   6.3  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    21   8.3  
AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex det...    21   8.3  
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    21   8.3  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    21   8.3  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    21   8.3  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    21   8.3  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    21   8.3  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    21   8.3  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    21   8.3  
AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex det...    21   8.3  
AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex det...    21   8.3  
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    21   8.3  
AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex det...    21   8.3  
AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    21   8.3  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    21   8.3  
AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex det...    21   8.3  
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    21   8.3  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    21   8.3  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    21   8.3  
AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    21   8.3  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    21   8.3  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    21   8.3  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    21   8.3  

>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = +3

Query: 240 DGVDLHERSRWTT*GRAAYVWRPTWFRRW 326
           DG++     RW   G  A VW   +F  W
Sbjct: 197 DGIENIGSIRWELAGTLAVVWIMCYFCIW 225


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = +3

Query: 240 DGVDLHERSRWTT*GRAAYVWRPTWFRRW 326
           DG++     RW   G  A VW   +F  W
Sbjct: 250 DGIENIGSIRWELAGTLAVVWIMCYFCIW 278


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 268 RDLSCKSTPSTYIE 227
           R +SC +TP ++IE
Sbjct: 656 RPISCHTTPDSFIE 669


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 34  FCDCLSLSLYSFYAILD 84
           +C+  SLS+  F A+LD
Sbjct: 540 YCNLFSLSVDHFNAVLD 556


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 34  FCDCLSLSLYSFYAILD 84
           +C+  SLS+  F A+LD
Sbjct: 508 YCNLFSLSVDHFNAVLD 524


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 155 PSLAGSWKQEQVKIIYYD 102
           P+L   WK E+++ IY +
Sbjct: 489 PNLLEGWKVEKIQEIYLE 506


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 274 VHRDLSCKSTPST 236
           +HRDL  KST +T
Sbjct: 135 IHRDLPGKSTTTT 147


>AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 274 VHRDLSCKSTPST 236
           +HRDL  KST +T
Sbjct: 135 IHRDLPGKSTTTT 147


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 274 VHRDLSCKSTPST 236
           +HRDL  KST +T
Sbjct: 135 IHRDLPGKSTTTT 147


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 274 VHRDLSCKSTPST 236
           +HRDL  KST +T
Sbjct: 135 IHRDLPGKSTTTT 147


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 274 VHRDLSCKSTPST 236
           +HRDL  KST +T
Sbjct: 135 IHRDLPGKSTTTT 147


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 274 VHRDLSCKSTPST 236
           +HRDL  KST +T
Sbjct: 135 IHRDLPGKSTTTT 147


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 274 VHRDLSCKSTPST 236
           +HRDL  KST +T
Sbjct: 124 IHRDLPGKSTTTT 136


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 274 VHRDLSCKSTPST 236
           +HRDL  KST +T
Sbjct: 135 IHRDLPGKSTTTT 147


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 274 VHRDLSCKSTPST 236
           +HRDL  KST +T
Sbjct: 135 IHRDLPGKSTTTT 147


>AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 274 VHRDLSCKSTPST 236
           +HRDL  KST +T
Sbjct: 124 IHRDLPGKSTTTT 136


>AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 274 VHRDLSCKSTPST 236
           +HRDL  KST +T
Sbjct: 135 IHRDLPGKSTTTT 147


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 274 VHRDLSCKSTPST 236
           +HRDL  KST +T
Sbjct: 135 IHRDLPGKSTTTT 147


>AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 274 VHRDLSCKSTPST 236
           +HRDL  KST +T
Sbjct: 124 IHRDLPGKSTTTT 136


>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 274 VHRDLSCKSTPST 236
           +HRDL  KST +T
Sbjct: 135 IHRDLPGKSTTTT 147


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 274 VHRDLSCKSTPST 236
           +HRDL  KST +T
Sbjct: 135 IHRDLPGKSTTTT 147


>AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 274 VHRDLSCKSTPST 236
           +HRDL  KST +T
Sbjct: 135 IHRDLPGKSTTTT 147


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 274 VHRDLSCKSTPST 236
           +HRDL  KST +T
Sbjct: 135 IHRDLPGKSTTTT 147


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 274 VHRDLSCKSTPST 236
           +HRDL  KST +T
Sbjct: 124 IHRDLPGKSTTTT 136


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 274 VHRDLSCKSTPST 236
           +HRDL  KST +T
Sbjct: 140 IHRDLPGKSTTTT 152


>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
           determiner protein.
          Length = 385

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 274 VHRDLSCKSTPST 236
           +HRDL  KST +T
Sbjct: 135 IHRDLPGKSTTTT 147


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 274 VHRDLSCKSTPST 236
           +HRDL  KST +T
Sbjct: 135 IHRDLPGKSTTTT 147


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 274 VHRDLSCKSTPST 236
           +HRDL  KST +T
Sbjct: 135 IHRDLPGKSTTTT 147


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 274 VHRDLSCKSTPST 236
           +HRDL  KST +T
Sbjct: 135 IHRDLPGKSTTTT 147


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,707
Number of Sequences: 438
Number of extensions: 1960
Number of successful extensions: 30
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11943513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)

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