Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0004
(777 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 3.2
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 3.2
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 3.2
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 5.5
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 5.5
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 5.5
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 5.5
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 5.5
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 22 5.5
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 22 7.3
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 7.3
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 7.3
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 7.3
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 7.3
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 3.2
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -2
Query: 659 VPIAHETKPTRLTARKIRGRPENAGPDPVRNVRR 558
VPI TKP AR +G N G + V V++
Sbjct: 292 VPIDANTKPCTWAARPWQGYMTNNGVNNVEAVQK 325
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 3.2
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -2
Query: 659 VPIAHETKPTRLTARKIRGRPENAGPDPVRNVRR 558
VPI TKP AR +G N G + V V++
Sbjct: 292 VPIDANTKPCTWAARPWQGYMTNNGVNNVEAVQK 325
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 3.2
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -2
Query: 659 VPIAHETKPTRLTARKIRGRPENAGPDPVRNVRR 558
VPI TKP AR +G N G + V V++
Sbjct: 292 VPIDANTKPCTWAARPWQGYMTNNGVNNVEAVQK 325
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.5
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -3
Query: 700 ASSELTVERRSYR---TCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 572
+S+ L RS++ +C SR + +RH+ R +G R+ R +S
Sbjct: 213 SSNSLRSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.5
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -3
Query: 700 ASSELTVERRSYR---TCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 572
+S+ L RS++ +C SR + +RH+ R +G R+ R +S
Sbjct: 213 SSNSLRSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.5
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -3
Query: 700 ASSELTVERRSYR---TCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 572
+S+ L RS++ +C SR + +RH+ R +G R+ R +S
Sbjct: 213 SSNSLRSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.2 bits (45), Expect = 5.5
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -3
Query: 700 ASSELTVERRSYR---TCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 572
+S+ L RS++ +C SR + +RH+ R +G R+ R +S
Sbjct: 213 SSNSLRSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.5
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -3
Query: 700 ASSELTVERRSYR---TCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 572
+S+ L RS++ +C SR + +RH+ R +G R+ R +S
Sbjct: 213 SSNSLRSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 22.2 bits (45), Expect = 5.5
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -1
Query: 129 PDLSAASSGHFGLPRRTLVFK 67
PDL+ S G GLP L +
Sbjct: 336 PDLAGTSQGSAGLPSAILAMR 356
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.8 bits (44), Expect = 7.3
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = -1
Query: 198 SEPYLPSIGFHGTRTLRQKRKLFPDLSA 115
SE P+ HG R RQ+ + D +
Sbjct: 472 SENNYPTTSIHGDRLQRQREEALADFKS 499
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.3
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -3
Query: 700 ASSELTVERRSYR---TCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 572
+S+ L RS++ +C SR + +RH+ R +G R+ R +S
Sbjct: 213 SSNSLGSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.8 bits (44), Expect = 7.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 610 IFLAVSRVGFVSCAIGTFCTT 672
+F+A+ V FVS IG FC T
Sbjct: 417 LFIAI--VCFVSYLIGLFCIT 435
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.8 bits (44), Expect = 7.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 610 IFLAVSRVGFVSCAIGTFCTT 672
+F+A+ V FVS IG FC T
Sbjct: 470 LFIAI--VCFVSYLIGLFCIT 488
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.8 bits (44), Expect = 7.3
Identities = 7/29 (24%), Positives = 16/29 (55%)
Frame = -1
Query: 309 LRIWVRTGATSPRTSLT*ISRSAESIRTP 223
++ W+ G T + +S+ +++RTP
Sbjct: 513 IKEWIERGTTKSMEAANIMSKLPKTVRTP 541
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,277
Number of Sequences: 438
Number of extensions: 5582
Number of successful extensions: 20
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24396777
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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