Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0007
         (665 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    25   0.49 
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   3.5  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   4.6  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   4.6  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   4.6  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    22   6.0  

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -2

Query: 208 QQHASCAAEQRPNTAPISSF*LSLCVDCVVCFMYY 104
           ++H +CA +  P  A +SS  +S  V C+V    Y
Sbjct: 179 EEHPTCALDLTPTYAVVSSS-ISFYVPCIVMLGIY 212


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 406 LPGNFKVDCDESGWIFGCL*NYICN 480
           +PG F +    + WIF C+  Y  N
Sbjct: 53  VPGPFSLPIFGTRWIFSCIGYYKLN 77


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 467 FYKQPNIQPLSSQSTLKFPG 408
           F +   +QP  SQS L+ PG
Sbjct: 431 FLRYKKLQPQYSQSELQMPG 450


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 467 FYKQPNIQPLSSQSTLKFPG 408
           F +   +QP  SQS L+ PG
Sbjct: 431 FLRYKKLQPQYSQSELQMPG 450


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +2

Query: 11  FNDKSKKSATEYFYVRLIISKYRYLLLGM 97
           + + S ++ T Y+   L +S   +L+LG+
Sbjct: 59  WRNPSMQTPTNYYLFNLAVSDLLFLILGL 87


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 467 ITFATCLFFLLMALIMIGV 523
           ITFA+ L F+L+  I + V
Sbjct: 82  ITFASFLLFILLVQIAVAV 100


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,421
Number of Sequences: 438
Number of extensions: 4350
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)