Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_B05
(598 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 23 3.0
AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropi... 22 5.3
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 21 6.9
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 6.9
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 6.9
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 6.9
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 6.9
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 6.9
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 6.9
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 21 6.9
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 6.9
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 21 6.9
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 21 9.2
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 22.6 bits (46), Expect = 3.0
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +1
Query: 415 QPRFQCQSIRH*KPAKYSSSSELQHCR 495
QP F+C+ + +Y S+ L H R
Sbjct: 418 QPAFRCKPSQRFASGRYYSAYSLHHVR 444
>AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropin
releasing hormone-binding protein protein.
Length = 332
Score = 21.8 bits (44), Expect = 5.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 51 RTDTRNNLANIFV 13
R DT+NNL N +V
Sbjct: 50 RQDTKNNLLNAYV 62
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 21.4 bits (43), Expect = 6.9
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 514 HVVHSGTDSVEVRNLRNIWQVFSGE 440
H H V+V NLR +V +GE
Sbjct: 39 HCSHCDRQFVQVANLRRHLRVHTGE 63
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +2
Query: 407 HNDNHDFSAKAFATKNLPNIPQVP 478
+N+N++ + K N+ NI Q+P
Sbjct: 97 YNNNYNTNYKKLQYYNIINIEQIP 120
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +2
Query: 407 HNDNHDFSAKAFATKNLPNIPQVP 478
+N+N++ + K N+ NI Q+P
Sbjct: 97 YNNNYNTNYKKLQYYNIINIEQIP 120
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +2
Query: 407 HNDNHDFSAKAFATKNLPNIPQVP 478
+N+N++ + K N+ NI Q+P
Sbjct: 97 YNNNYNTNYKKLQYYNIINIEQIP 120
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +2
Query: 407 HNDNHDFSAKAFATKNLPNIPQVP 478
+N+N++ + K N+ NI Q+P
Sbjct: 97 YNNNYNTNYKKLQYYNIINIEQIP 120
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +2
Query: 407 HNDNHDFSAKAFATKNLPNIPQVP 478
+N+N++ + K N+ NI Q+P
Sbjct: 97 YNNNYNTNYKKLQYYNIINIEQIP 120
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +2
Query: 407 HNDNHDFSAKAFATKNLPNIPQVP 478
+N+N++ + K N+ NI Q+P
Sbjct: 97 YNNNYNTNYKKLQYYNIINIEQIP 120
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +2
Query: 407 HNDNHDFSAKAFATKNLPNIPQVP 478
+N+N++ + K N+ NI Q+P
Sbjct: 101 YNNNYNTNYKKLQYYNIINIEQIP 124
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +2
Query: 407 HNDNHDFSAKAFATKNLPNIPQVP 478
+N+N++ + K N+ NI Q+P
Sbjct: 97 YNNNYNTNYKKLQYYNIINIEQIP 120
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 21.4 bits (43), Expect = 6.9
Identities = 10/45 (22%), Positives = 18/45 (40%)
Frame = +2
Query: 398 NLFHNDNHDFSAKAFATKNLPNIPQVPNFNTVGAGVDYMFKDKIG 532
+L N+N DF + P++ P ++ G D +G
Sbjct: 349 HLISNENRDFQTTPTVSVEQPHLFLYPEVSSTYTGFGIQSTDFVG 393
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 21.0 bits (42), Expect = 9.2
Identities = 10/40 (25%), Positives = 15/40 (37%)
Frame = +2
Query: 101 YIEQYEDQPEQWANSRVRRQAGALTVNSDGTSGAMVKVPI 220
Y + E W N+ V R NS+ + + V I
Sbjct: 264 YFHSLASRVESWVNTSVIRNYTLFNENSEAAARSFVPFSI 303
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,040
Number of Sequences: 438
Number of extensions: 3952
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -