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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40030
         (879 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c...   102   4e-22
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c...    99   2e-21
At1g69400.2 68414.m07968 transducin family protein / WD-40 repea...    80   2e-15
At1g69400.1 68414.m07969 transducin family protein / WD-40 repea...    80   2e-15
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea...    46   3e-05
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep...    43   2e-04
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote...    41   0.001
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea...    40   0.003
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote...    39   0.004
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea...    39   0.004
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea...    38   0.007
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea...    38   0.007
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea...    37   0.015
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p...    37   0.020
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea...    36   0.036
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea...    36   0.036
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf...    35   0.082
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea...    35   0.082
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea...    33   0.19 
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ...    33   0.19 
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ...    33   0.19 
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ...    33   0.19 
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf...    33   0.19 
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ...    33   0.19 
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ...    33   0.19 
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea...    33   0.25 
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea...    33   0.25 
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p...    33   0.25 
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea...    33   0.25 
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea...    33   0.33 
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi...    32   0.44 
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ...    32   0.44 
At1g29900.1 68414.m03654 carbamoyl-phosphate synthase family pro...    32   0.44 
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea...    32   0.58 
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea...    32   0.58 
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea...    32   0.58 
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul...    29   0.59 
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p...    31   0.77 
At5g51740.1 68418.m06416 peptidase M48 family protein contains P...    31   1.0  
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea...    31   1.0  
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea...    31   1.0  
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea...    31   1.0  
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul...    28   1.3  
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea...    31   1.3  
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea...    31   1.3  
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf...    31   1.3  
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea...    31   1.3  
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea...    31   1.3  
At1g74750.1 68414.m08661 pentatricopeptide (PPR) repeat-containi...    31   1.3  
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea...    30   1.8  
At3g24900.1 68416.m03122 disease resistance family protein / LRR...    30   2.3  
At2g34260.2 68415.m04192 transducin family protein / WD-40 repea...    30   2.3  
At2g34260.1 68415.m04191 transducin family protein / WD-40 repea...    30   2.3  
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf...    29   3.1  
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro...    29   3.1  
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ...    29   3.1  
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea...    29   3.1  
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro...    29   4.1  
At2g46280.3 68415.m05757 eukaryotic translation initiation facto...    29   4.1  
At2g46280.2 68415.m05756 eukaryotic translation initiation facto...    29   4.1  
At2g46280.1 68415.m05755 eukaryotic translation initiation facto...    29   4.1  
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea...    29   4.1  
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec...    29   4.1  
At2g10500.1 68415.m01106 hypothetical protein similar to At2g108...    29   5.4  
At2g05860.1 68415.m00635 hypothetical protein similar to At2g108...    29   5.4  
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf...    29   5.4  
At1g12820.1 68414.m01489 transport inhibitor response protein, p...    29   5.4  
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro...    28   7.2  
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam...    28   7.2  
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea...    28   7.2  
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea...    28   7.2  
At5g52250.1 68418.m06485 transducin family protein / WD-40 repea...    28   9.5  
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro...    28   9.5  
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ...    28   9.5  
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta...    28   9.5  
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta...    28   9.5  
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta...    28   9.5  
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro...    28   9.5  
At2g46560.1 68415.m05808 transducin family protein / WD-40 repea...    28   9.5  
At2g46290.1 68415.m05758 eukaryotic translation initiation facto...    28   9.5  
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf...    28   9.5  
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf...    28   9.5  

>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
           checkpoint protein, putative contains 5 WD-40 repeats
           (PF00400) (1 weak); similar to testis mitotic checkpoint
           protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
          Length = 339

 Score =  102 bits (244), Expect = 4e-22
 Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 4/210 (1%)
 Frame = +3

Query: 258 YLLVSSWDCSVRLYDVTANIERHKYNHELPVLDVCFRDAVHSYSGGLDQTLKMYDLNAST 437
           +LLVSSWD SVRLYD   ++ R ++ H   VLD CF D    +S   D  ++  D NA  
Sbjct: 30  HLLVSSWDKSVRLYDANGDLMRGEFKHGGAVLDCCFHDDSSGFSVCADTKVRRIDFNAGK 89

Query: 438 ETILGEHKGAIRCVEFASELNAVLQEAGMEQSKC----GIAEFQTVSALTIREMNGYTQ* 605
           E +LG H+  +RCVE++     V+  +  +  KC    G +  +     T  +       
Sbjct: 90  EDVLGTHEKPVRCVEYSYAAGQVITGSWDKTIKCWDPRGASGTERTQIGTYMQPERVNSL 149

Query: 606 A*LAKSS*LVHXDVKIFVWDVRNMGHVNQRRDPHSNIQPRCLRVFPHKQGLRISSIRGTC 785
           + +     +      + ++D+RNM    QRR+     Q RC+R +P+  G  +SS+ G  
Sbjct: 150 SLVGNRLVVATAGRHVNIYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRV 209

Query: 786 CGGVFWVXKS*GAEEEIMPFKCPPGLKEGR 875
               F + ++  A+ +   FKC    ++GR
Sbjct: 210 SMEFFDLSEA--AQAKKYAFKCHRKSEDGR 237



 Score = 48.4 bits (110), Expect = 6e-06
 Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
 Frame = +2

Query: 509 TGSWDGTVKMWDSRVPN-----CVGTYNQGNERVYTMSIVGEKFVVGTSGRK-NICMGRS 670
           TGSWD T+K WD R  +      +GTY Q  ERV ++S+VG + VV T+GR  NI   R+
Sbjct: 114 TGSWDKTIKCWDPRGASGTERTQIGTYMQ-PERVNSLSLVGNRLVVATAGRHVNIYDLRN 172

Query: 671 *HGACKSKEGSSLQYPT 721
                + +  SSL+Y T
Sbjct: 173 -MSQPEQRRESSLKYQT 188


>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
           checkpoint protein, putative contains 5 WD-40 repeats
           (PF00400) (1 weak); similar to testis mitotic checkpoint
           protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
          Length = 340

 Score =   99 bits (238), Expect = 2e-21
 Identities = 67/212 (31%), Positives = 103/212 (48%), Gaps = 6/212 (2%)
 Frame = +3

Query: 258 YLLVSSWDCSVRLYDVTANIERHKYNHELPVLDVCFRDAVHSYSGGLDQTLKMYDLNAST 437
           +LLVSSWD  VRLYDV+ N  + ++ H   VLD CF D    +S G D  ++    N   
Sbjct: 31  HLLVSSWDKRVRLYDVSTNSLKGEFLHGGAVLDCCFHDDFSGFSVGADYKVRRIVFNVGK 90

Query: 438 ETILGEHKGAIRCVEFASELNAVLQEAGMEQSKCGIAEFQTVSALTIREMNGYTQ*A*LA 617
           E ILG H  A+RCVE++     V+  +  +  KC   + +  S     ++  Y Q   + 
Sbjct: 91  EDILGTHDKAVRCVEYSYAAGQVITGSWDKTVKCW--DPRGASGPERTQVGTYLQPERVY 148

Query: 618 KSS*LVHXDV------KIFVWDVRNMGHVNQRRDPHSNIQPRCLRVFPHKQGLRISSIRG 779
             S + H  V       + ++D+RNM    QRR+     Q RC+R +P+  G  +SS+ G
Sbjct: 149 SMSLVGHRLVVATAGRHVNIYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEG 208

Query: 780 TCCGGVFWVXKS*GAEEEIMPFKCPPGLKEGR 875
                 F + ++  A+ +   FKC    + GR
Sbjct: 209 RVAMEFFDLSEA--AQAKKYAFKCHRKSEAGR 238



 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 37/77 (48%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
 Frame = +2

Query: 509 TGSWDGTVKMWDSRVPNC-----VGTYNQGNERVYTMSIVGEKFVVGTSGRK-NICMGRS 670
           TGSWD TVK WD R  +      VGTY Q  ERVY+MS+VG + VV T+GR  NI   R+
Sbjct: 115 TGSWDKTVKCWDPRGASGPERTQVGTYLQP-ERVYSMSLVGHRLVVATAGRHVNIYDLRN 173

Query: 671 *HGACKSKEGSSLQYPT 721
                + +  SSL+Y T
Sbjct: 174 -MSQPEQRRESSLKYQT 189


>At1g69400.2 68414.m07968 transducin family protein / WD-40 repeat
           family protein similar to mitotic checkpoint protein
           (GI:9294423) {Arabidopsis thaliana}; similar to mitotic
           checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
          Length = 272

 Score = 79.8 bits (188), Expect = 2e-15
 Identities = 54/205 (26%), Positives = 95/205 (46%)
 Frame = +3

Query: 261 LLVSSWDCSVRLYDVTANIERHKYNHELPVLDVCFRDAVHSYSGGLDQTLKMYDLNASTE 440
           LLV+SWD  +RLYDV ++    + N +  +LD CF +   S++ G D  ++ YDLNA T 
Sbjct: 28  LLVASWDSYLRLYDVESSSLSLELNSQAALLDCCFENESTSFTSGSDGFIRRYDLNAGTV 87

Query: 441 TILGEHKGAIRCVEFASELNAVLQEAGMEQSKCGIAEFQTVSALTIREMNGYTQ*A*LAK 620
             +G H      + ++ E   V+     E+ K      Q  S +   +  G      ++ 
Sbjct: 88  DTIGRHDDISTSIVYSYEKGEVISTGFDEKIKFWDTR-QRESLVFSTDAGGAVGCVTVSG 146

Query: 621 SS*LVHXDVKIFVWDVRNMGHVNQRRDPHSNIQPRCLRVFPHKQGLRISSIRGTCCGGVF 800
           ++ +V  D  + ++D+RN+    Q       +  RC+   P+ +G  + S+ G     V 
Sbjct: 147 NNLVVCVDASMHIYDLRNLDEAFQSYASQVEVPIRCITSVPYSRGYAVGSVDGRV--AVD 204

Query: 801 WVXKS*GAEEEIMPFKCPPGLKEGR 875
           +   S  +E +   F+C P  + GR
Sbjct: 205 FPNTSCSSEIK-YSFRCHPKSRNGR 228


>At1g69400.1 68414.m07969 transducin family protein / WD-40 repeat
           family protein similar to mitotic checkpoint protein
           (GI:9294423) {Arabidopsis thaliana}; similar to mitotic
           checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
          Length = 314

 Score = 79.8 bits (188), Expect = 2e-15
 Identities = 54/205 (26%), Positives = 95/205 (46%)
 Frame = +3

Query: 261 LLVSSWDCSVRLYDVTANIERHKYNHELPVLDVCFRDAVHSYSGGLDQTLKMYDLNASTE 440
           LLV+SWD  +RLYDV ++    + N +  +LD CF +   S++ G D  ++ YDLNA T 
Sbjct: 28  LLVASWDSYLRLYDVESSSLSLELNSQAALLDCCFENESTSFTSGSDGFIRRYDLNAGTV 87

Query: 441 TILGEHKGAIRCVEFASELNAVLQEAGMEQSKCGIAEFQTVSALTIREMNGYTQ*A*LAK 620
             +G H      + ++ E   V+     E+ K      Q  S +   +  G      ++ 
Sbjct: 88  DTIGRHDDISTSIVYSYEKGEVISTGFDEKIKFWDTR-QRESLVFSTDAGGAVGCVTVSG 146

Query: 621 SS*LVHXDVKIFVWDVRNMGHVNQRRDPHSNIQPRCLRVFPHKQGLRISSIRGTCCGGVF 800
           ++ +V  D  + ++D+RN+    Q       +  RC+   P+ +G  + S+ G     V 
Sbjct: 147 NNLVVCVDASMHIYDLRNLDEAFQSYASQVEVPIRCITSVPYSRGYAVGSVDGRV--AVD 204

Query: 801 WVXKS*GAEEEIMPFKCPPGLKEGR 875
           +   S  +E +   F+C P  + GR
Sbjct: 205 FPNTSCSSEIK-YSFRCHPKSRNGR 228


>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
           family protein contains 5 WD-40 repeats (PF00400) (1
           weak); similar to Hypothetical RAE1-like
           protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
           mRNA-associated protein mrnp 41 ((mRNA export protein)
           (GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
           [Homo sapiens]
          Length = 349

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 24/50 (48%), Positives = 31/50 (62%)
 Frame = +2

Query: 506 ATGSWDGTVKMWDSRVPNCVGTYNQGNERVYTMSIVGEKFVVGTSGRKNI 655
           ATGSWD T+K WD+R  N V T  Q  ++ YT+S+     VVGT+ R  I
Sbjct: 130 ATGSWDKTLKYWDTRQQNPVHT-QQLPDKCYTLSVKHPLMVVGTADRNLI 178



 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 43/183 (23%), Positives = 79/183 (43%), Gaps = 10/183 (5%)
 Frame = +3

Query: 261 LLVSSWDCSVRLYDVT------ANIERHKYNHELPVLDVCFRD-AVHSYSGGLDQTLKMY 419
           L+ +SWD  VR ++++      A+  +   +H+ PVL   ++D     +SGG D+  KM+
Sbjct: 40  LVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQAKMW 99

Query: 420 DLNASTETI-LGEHKGAIRCVEFASELNAVLQEAGMEQSKCGIAEFQTVSALTIREMNGY 596
            L +  + + +  H+G I  + +   +N +   +  +  K      Q            Y
Sbjct: 100 PLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWDTRQQNPVHTQQLPDKCY 159

Query: 597 TQ*A*LAKSS*LV--HXDVKIFVWDVRNMGHVNQRRDPHSNIQPRCLRVFPHKQGLRISS 770
           T      K   +V    D  + V++++N     +R       Q RC+  FP +QG  + S
Sbjct: 160 TL---SVKHPLMVVGTADRNLIVFNLQNPQTEFKRIQSPLKYQTRCVTAFPDQQGFLVGS 216

Query: 771 IRG 779
           I G
Sbjct: 217 IEG 219


>At1g18080.1 68414.m02238 WD-40 repeat family protein /
           auxin-dependent protein (ARCA) / guanine
           nucleotide-binding protein beta subunit, putative
           identical to SP|O24456 Guanine nucleotide-binding
           protein beta subunit-like protein (WD-40 repeat
           auxin-dependent protein ARCA) {Arabidopsis thaliana};
           contains 7 WD-40 repeats (PF00400)
          Length = 327

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
 Frame = +3

Query: 183 AHRVQIKKLTRRRYF-ER*ICTEI*QYLLVSSWDCSVRLYDVTANIERHKY-NHELPVLD 356
           A+ V  ++LT   +F E  + +   Q+ L  SWD  +RL+D+ A +   ++  H   VL 
Sbjct: 51  AYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLS 110

Query: 357 VCFR-DAVHSYSGGLDQTLKMYDLNASTETILGE----HKGAIRCVEFA 488
           V F  D     S   D+T+K+++     +  + E    H+  + CV F+
Sbjct: 111 VAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFS 159


>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
           / activated protein kinase C receptor (RACK1) identical
           to guanine nucleotide-binding protein; activated protein
           kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
           thaliana}; contains Pfam profile: PF00400 WD domain,
           G-beta repeat (7 copies)
          Length = 326

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
 Frame = +3

Query: 183 AHRVQIKKLTRRRYF-ER*ICTEI*QYLLVSSWDCSVRLYDV-TANIERHKYNHELPVLD 356
           ++ V  ++LT   +F E  + +   Q+ L  SWD  +RL+D+ T    R    H   VL 
Sbjct: 51  SYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLS 110

Query: 357 VCF-RDAVHSYSGGLDQTLKMYDLNASTETILGE---HKGAIRCVEFA 488
           V F  D     S   D+T+K+++     +  + E   HK  + CV F+
Sbjct: 111 VAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFS 158


>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
           family protein contains Pfam profile:PF00560 Leucine
           Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
           protein kinase domain; Pfam profile:PF00400 WD domain,
           G-beta repeat (7 copies)
          Length = 407

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = +2

Query: 506 ATGSWDGTVKMWDSRVPNCVGTYNQGNERVYTMSI-VGEKFVVGTS 640
           ATG  +GTV +WDS + NCV TY+   + V  +S+     F+V  S
Sbjct: 344 ATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIVSVS 389


>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
           / activated protein kinase C receptor, putative / RACK,
           putative contains 7 WD-40 repeats (PF00400); very
           similar to guanine nucleotide-binding protein; activated
           protein kinase C receptor; RACK1 (GI:9294068)
           {Arabidopsis thaliana}; similar to WD-40 repeat
           auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
           thaliana];
          Length = 326

 Score = 39.1 bits (87), Expect = 0.004
 Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
 Frame = +3

Query: 255 QYLLVSSWDCSVRLYDV-TANIERHKYNHELPVLDVCF-RDAVHSYSGGLDQTLKMYDLN 428
           Q+ L  SWD  +RL+D+ T    R    H   VL V F  D     S   D+T+K+++  
Sbjct: 76  QFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTL 135

Query: 429 ASTETILGE---HKGAIRCVEFA 488
              +  + E   HK  + CV F+
Sbjct: 136 GECKYTISEADGHKEWVSCVRFS 158


>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
           family protein Strong similarity to gb AF096285
           serine-threonine kinase receptor-associated protein from
           Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
           domains. EST gb|F14050 comes from this gene
          Length = 333

 Score = 39.1 bits (87), Expect = 0.004
 Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
 Frame = +3

Query: 270 SSWDCSVRLYDVTANIERHKYNHELPVLDVCFRDAVHSY-SGGLDQTLKMYDLNA--STE 440
           +S D + ++++     E H + H+  V    F +  H   +GG+++ L+++DLN   +  
Sbjct: 74  ASADFTAKIWNALTGDELHSFEHKHIVRACAFSEDTHRLLTGGMEKILRIFDLNRPDAPP 133

Query: 441 TILGEHKGAIRCVEFASELNAVL 509
             +G   G+IR VE+    N +L
Sbjct: 134 KEVGNSPGSIRTVEWLHSDNTIL 156


>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
           family protein Strong similarity to gb X95263 Periodic
           tryptophan protein 2 gene (PWP2) from Homo sapiens and
           contains 6 WD40, G-beta repeat domains
          Length = 860

 Score = 38.3 bits (85), Expect = 0.007
 Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
 Frame = +3

Query: 255 QYLLVSSWDCSVRLYDVTAN---IERHKYNHELPVLDVCFR-DAVHSYSGGLDQTLKMYD 422
           Q L  SSWD +VRL+DV A+   +E  ++NH+  VL V FR D     S  LD  +  +D
Sbjct: 490 QLLASSSWDYTVRLWDVFASKGTVETFRHNHD--VLTVAFRPDGKQLASSTLDGQINFWD 547


>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
           family protein Strong similarity to gb X95263 Periodic
           tryptophan protein 2 gene (PWP2) from Homo sapiens and
           contains 6 WD40, G-beta repeat domains
          Length = 900

 Score = 38.3 bits (85), Expect = 0.007
 Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
 Frame = +3

Query: 255 QYLLVSSWDCSVRLYDVTAN---IERHKYNHELPVLDVCFR-DAVHSYSGGLDQTLKMYD 422
           Q L  SSWD +VRL+DV A+   +E  ++NH+  VL V FR D     S  LD  +  +D
Sbjct: 530 QLLASSSWDYTVRLWDVFASKGTVETFRHNHD--VLTVAFRPDGKQLASSTLDGQINFWD 587


>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
           family protein contains 3 WD-40 repeats (PF00400);
           mRNA-associated protein mrnp 41 (SP:P78406) [Homo
           sapiens]; similar to mitotic checkpoint protein
           GI:9294423 from [Arabidopsis thaliana]
          Length = 140

 Score = 37.1 bits (82), Expect = 0.015
 Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
 Frame = +3

Query: 261 LLVSSWDCSVRLYDVT------ANIERHKYNHELPVLDVCFR-DAVHSYSGGLDQTLKMY 419
           L+ +SWDC VR +++T      A+  +   +H+ PVL   ++ D    ++GG D+  KM+
Sbjct: 41  LVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQPVLCSAWKDDGTTVFTGGCDKQAKMW 100

Query: 420 DL 425
            L
Sbjct: 101 PL 102


>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
            protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
            domain; contains Pfam PF00400: WD domain, G-beta repeat
            (8 copies); identical to stomatal cytokinesis defective
            [Arabidopsis thaliana] GI:19743728; supporting cDNA
            gi|19743727|gb|AY082605.1|; PMID 12874123
          Length = 1187

 Score = 36.7 bits (81), Expect = 0.020
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +2

Query: 509  TGSWDGTVKMWDSRVPNCVGTYNQGNERVYTMSIVGEKFVVGTSGRKNI 655
            T + DGTVKMWD R   CV T  + +  + ++       ++  +GR  +
Sbjct: 955  TAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTGILAAAGRDTV 1003


>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
           family protein contains 8 WD-40 repeats (PF00400);
           similar to transducin homolog sazD - Homo sapiens,
           EMBL:U02609
          Length = 876

 Score = 35.9 bits (79), Expect = 0.036
 Identities = 11/41 (26%), Positives = 25/41 (60%)
 Frame = +2

Query: 521 DGTVKMWDSRVPNCVGTYNQGNERVYTMSIVGEKFVVGTSG 643
           DG +K+W+     C+ TY+Q  ++V+ +++  +  ++ T G
Sbjct: 604 DGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGG 644



 Score = 30.3 bits (65), Expect = 1.8
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +2

Query: 509 TGSWDGTVKMWDSRVPNCVGTYNQGNERVYTMSIVGEKFVVGTSG 643
           TGS D TV++W++   +C+G     N  +  ++   + F    SG
Sbjct: 421 TGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSG 465


>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
           family protein contains 5 (4 significant) WD-40 repeats;
           similar to periodic tryptophan protein 1 homolog
           (Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
           (PIR2:I39360) [Homo sapiens]
          Length = 494

 Score = 35.9 bits (79), Expect = 0.036
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = +2

Query: 506 ATGSWDGTVKMWD--SRVPNCVGTYNQGNERVYTMSI-VGEKFVVGTSGRK 649
           ATGS D +VK+WD  +  P+C+ T+      V+++S  V   F++   G K
Sbjct: 421 ATGSMDKSVKLWDLSNNEPSCIATHQPNAGAVFSISFAVDNPFLLAIGGSK 471


>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
           PF00400: WD domain, G-beta repeat; similar to WD-repeat
           protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
           sapiens]
          Length = 825

 Score = 34.7 bits (76), Expect = 0.082
 Identities = 13/46 (28%), Positives = 28/46 (60%)
 Frame = +3

Query: 348 VLDVCFRDAVHSYSGGLDQTLKMYDLNASTETILGEHKGAIRCVEF 485
           VLD+ +  + H  S  +D+T++++DL++ T   +  H   + C++F
Sbjct: 471 VLDLSWSKSQHLLSSSMDKTVRLWDLSSKTCLKVFSHSDYVTCIQF 516



 Score = 30.3 bits (65), Expect = 1.8
 Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
 Frame = +3

Query: 255 QYLLVSSWDCSVRLYDVTANIERHKYNHELPVLDVCFRDAVHSY--SGGLDQTLKMYDL 425
           Q+LL SS D +VRL+D+++      ++H   V  + F     +Y  SG LD  ++++ +
Sbjct: 480 QHLLSSSMDKTVRLWDLSSKTCLKVFSHSDYVTCIQFNPVDDNYFISGSLDAKVRIWSI 538



 Score = 29.9 bits (64), Expect = 2.3
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = +3

Query: 642 DVKIFVWDVRNMGHVNQRRDPHSNIQPRCLRVFPHKQGLRISSIRGTCC 788
           D K+ +W + +   V+   D H  +   C    P  QG  + S +GTCC
Sbjct: 530 DAKVRIWSIPDHQVVDWN-DLHEMVTAACYT--PDGQGALVGSYKGTCC 575


>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
           family protein contains 7 WD-40 repeats (PF00400);
           similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
           [Homo sapiens]
          Length = 343

 Score = 34.7 bits (76), Expect = 0.082
 Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 4/119 (3%)
 Frame = +3

Query: 195 QIKKLTRRRYFER*IC-TEI*QYLLVS-SWDCSVRLYDVTANIERHKYNHELPVLDVCFR 368
           QIKK+     F    C T     L++S S D + +L+D+        +  +  +  V F 
Sbjct: 130 QIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFS 189

Query: 369 DAVHS-YSGGLDQTLKMYDLNASTETI-LGEHKGAIRCVEFASELNAVLQEAGMEQSKC 539
           DA    ++GG+D  +K++DL     T+ L  H+  I  +  + +  + L   GM+   C
Sbjct: 190 DAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPD-GSYLLTNGMDNKLC 247


>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
           family protein contains 6 WD-40 repeats (PF00400);
           similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
          Length = 305

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +2

Query: 509 TGSWDGTVKMWDSRVPNCVGTY 574
           +GS DGTVK+WD R P C   Y
Sbjct: 95  SGSEDGTVKIWDLRAPGCQKEY 116



 Score = 31.5 bits (68), Expect = 0.77
 Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
 Frame = +3

Query: 255 QYLLVSSWDCSVRLYDVTANIERHKY---NHELPVLDVCFR-DAVHSYSGGLDQTLKMYD 422
           ++ L ++ +  +RL+DV +N  +      +H   V+ V F+ DA   YSG  D T+K++D
Sbjct: 47  KHYLAAACNPHIRLFDVNSNSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWD 106

Query: 423 LNA 431
           L A
Sbjct: 107 LRA 109



 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/50 (24%), Positives = 23/50 (46%)
 Frame = +2

Query: 506 ATGSWDGTVKMWDSRVPNCVGTYNQGNERVYTMSIVGEKFVVGTSGRKNI 655
           AT S+D T++ W++    C  T    +  V  + I  +K  +  +   +I
Sbjct: 9   ATASYDHTIRFWEAETGRCYRTIQYPDSHVNRLEITPDKHYLAAACNPHI 58


>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
           (beta prime), putative contains 7 WD-40 repeats
           (PF00400) (1 weak); identical to coatomer protein
           complex, beta prime (beta'-COP) protein {Arabidopsis
           thaliana} (GI:9294445); similar to Coatomer beta'
           subunit (Beta'-coat protein) (Beta'-COP) (p102)
           (SP:P35606) [Homo sapiens]
          Length = 918

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = +2

Query: 509 TGSWDGTVKMWDSRVPNCVGTYNQGNERVYTMSIV--GEKFVVG-TSGRKNICMGR 667
           TGS DGTV++W +       T N G ERV+ +  +    + V+G   G   + +GR
Sbjct: 246 TGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMVKLGR 301


>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
           (beta prime), putative contains 7 WD-40 repeats
           (PF00400) (1 weak); identical to coatomer protein
           complex, beta prime (beta'-COP) protein {Arabidopsis
           thaliana} (GI:9294445); similar to Coatomer beta'
           subunit (Beta'-coat protein) (Beta'-COP) (p102)
           (SP:P35606) [Homo sapiens]
          Length = 918

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = +2

Query: 509 TGSWDGTVKMWDSRVPNCVGTYNQGNERVYTMSIV--GEKFVVG-TSGRKNICMGR 667
           TGS DGTV++W +       T N G ERV+ +  +    + V+G   G   + +GR
Sbjct: 246 TGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMVKLGR 301


>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
           (beta prime), putative contains 7 WD-40 repeats
           (PF00400) (1 weak); identical to coatomer protein
           complex, beta prime (beta'-COP) protein {Arabidopsis
           thaliana} (GI:9294445); similar to Coatomer beta'
           subunit (Beta'-coat protein) (Beta'-COP) (p102)
           (SP:P35606) [Homo sapiens]
          Length = 909

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = +2

Query: 509 TGSWDGTVKMWDSRVPNCVGTYNQGNERVYTMSIV--GEKFVVG-TSGRKNICMGR 667
           TGS DGTV++W +       T N G ERV+ +  +    + V+G   G   + +GR
Sbjct: 246 TGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMVKLGR 301


>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
           PF00400: WD domain, G-beta repeat; similar to WD-repeat
           protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
           sapiens]
          Length = 883

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 13/50 (26%), Positives = 29/50 (58%)
 Frame = +3

Query: 336 HELPVLDVCFRDAVHSYSGGLDQTLKMYDLNASTETILGEHKGAIRCVEF 485
           H   VLD+ +  + H  S  +D+T+++++L++ T   +  H   + C++F
Sbjct: 512 HVDDVLDLAWSKSQHLLSSSMDKTVRLWNLSSQTCLKVFSHSDYVTCIQF 561


>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
           (beta prime), putative contains 7 WD-40 repeats
           (PF00400) (1 weak); similar to Coatomer beta' subunit
           (Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
           [Homo sapiens]; similar to Coatomer beta' subunit
           (Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
           musculus]
          Length = 920

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +2

Query: 509 TGSWDGTVKMWDSRVPNCVGTYNQGNERVYTMS-IVGEKFVV 631
           TGS DGTV++W +       T N G ERV+ +  I G + VV
Sbjct: 246 TGSEDGTVRIWHATTYRLENTLNYGLERVWAIGHIKGSRRVV 287



 Score = 28.7 bits (61), Expect = 5.4
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +2

Query: 509 TGSWDGTVKMWDSRVPNCVGTYNQGNERVYTMSIVGEKFVVGT 637
           TGS D T K+WD +  +CV T       V  +S   E  ++ T
Sbjct: 204 TGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIIT 246



 Score = 28.3 bits (60), Expect = 7.2
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +2

Query: 518 WDGTVKMWDSRVPNCVGTYNQGNERVYTMSIVGEKFV-VGTSGRKNICMG 664
           +DG  ++ +  + +     N+ NERV T   VG+ F+   +S R N C+G
Sbjct: 499 FDGGKQIDEEGIEDAFELLNETNERVRTGLWVGDCFIYTNSSWRLNYCVG 548


>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
           (beta prime), putative contains 7 WD-40 repeats
           (PF00400) (1 weak); similar to (SP:O55029) Coatomer
           beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
           (SP:O55029) [Mus musculus]; similar to GI:298096 from
           [Homo sapiens]
          Length = 926

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = +2

Query: 509 TGSWDGTVKMWDSRVPNCVGTYNQGNERVYTMSIV--GEKFVVG-TSGRKNICMGR 667
           TGS DGTV++W +       T N G ERV+ +  +    + V+G   G   + +GR
Sbjct: 246 TGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMVKLGR 301


>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
           family protein contains 5 (4 significant) WD-40 repeats;
           similar to periodic tryptophan protein 1 homolog  
           (Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
           (PIR2:I39360) [Homo sapiens]
          Length = 461

 Score = 33.1 bits (72), Expect = 0.25
 Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 2/26 (7%)
 Frame = +2

Query: 506 ATGSWDGTVKMWD--SRVPNCVGTYN 577
           ATGS D TVK+WD  +  P+C+ T+N
Sbjct: 386 ATGSKDRTVKLWDLSNNEPSCIATHN 411


>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
           family protein contains 7 WD-40 repeats (PF00400);
           similar to serine/threonine kinase receptor associated
           protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
           UNR-interacting protein GB:NP_009109 [Homo sapiens]
          Length = 341

 Score = 33.1 bits (72), Expect = 0.25
 Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
 Frame = +3

Query: 270 SSWDCSVRLYDVTANIERHKYNHELPVLDVCF-RDAVHSYSGGLDQTLKMYDLNA--STE 440
           +S D S +L+D       H + H+  V    F +D  +  +GG ++ L+++DLN   +  
Sbjct: 79  ASADFSAKLWDALTGDVLHSFEHKHIVRACAFSQDTKYLITGGFEKILRVFDLNRLDAPP 138

Query: 441 TILGEHKGAIR 473
           T + +  G+IR
Sbjct: 139 TEIDKSPGSIR 149


>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
           subunit, putative contains 5 WD-40 repeats (PF00400);
           similar to katanin p80 subunit (GI:3005601)
           [Strongylocentrotus purpuratus]
          Length = 1180

 Score = 33.1 bits (72), Expect = 0.25
 Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
 Frame = +3

Query: 255 QYLLVSSWDCSVRLYDVTAN--IERHKYNHELPVLDVCFR-DAVHSYSGGLDQTLKMYDL 425
           ++L   S D +++++D+     I+ +K  H   +  + F  D     SGGLD  +K++DL
Sbjct: 113 EFLASGSSDANLKIWDIRKKGCIQTYK-GHSRGISTIRFTPDGRWVVSGGLDNVVKVWDL 171

Query: 426 NASTETILGE---HKGAIRCVEF 485
            A    +L E   H+G IR ++F
Sbjct: 172 TAG--KLLHEFKFHEGPIRSLDF 192



 Score = 32.7 bits (71), Expect = 0.33
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = +2

Query: 506 ATGSWDGTVKMWDSRVPNCVGTYNQGNERVYTMSIVGEKFVVGTSGRKNI 655
           A+GS D  +K+WD R   C+ TY   +  + T+    +   V + G  N+
Sbjct: 116 ASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNV 165


>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
           family protein similar to splicing factor hPRP17
           (gi|3283220); contains 7 WD-40 repeats (PF00400);similar
           to ESTs emb|F15435 and dbj|AUO62661
          Length = 573

 Score = 33.1 bits (72), Expect = 0.25
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
 Frame = +3

Query: 261 LLVSSWDCSVRLYDV--TANIERHKYNHELPVLDVCF-RDAVHSYSGGLDQTLKMYD 422
           LL +  DC V+++DV  +    R    H   V D+CF  D     + G D+ +K +D
Sbjct: 298 LLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWD 354


>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
           family protein similar to TBP-associated factor
           (GI:1732075) [Homo sapiens] and to 100 kDa subunit of
           Pol II transcription factor (GI:1491718) {Homo sapiens];
           contains Pfam PF00400: WD domain, G-beta repeat (6
           copies)|8689032|gb|AV528749.1|AV528749
          Length = 666

 Score = 32.7 bits (71), Expect = 0.33
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 506 ATGSWDGTVKMWDSRVPNCVGTYNQGNERVYTMSIVGE 619
           A+G  DGT+ MWD     C+      N  V+++S  GE
Sbjct: 557 ASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGE 594



 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 506 ATGSWDGTVKMWDSRVPNCV 565
           ATGS D TV++WD +   CV
Sbjct: 515 ATGSSDKTVRLWDVQTGECV 534


>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
           similarity to unknown protein (ref|NP_005638.1)
          Length = 613

 Score = 32.3 bits (70), Expect = 0.44
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = +2

Query: 506 ATGSWDGTVKMWDSRVPNCVGTYNQGNERVYTMS 607
           A+ S+D TVK+WD+ +   + ++N   E VY+++
Sbjct: 515 ASASFDSTVKLWDAELGKMLCSFNGHREPVYSLA 548


>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
           WD-40 repeats (PF00400); similar to pre-mRNA splicing
           factor PRP17 (SP:O60508) [Homo sapiens]
          Length = 457

 Score = 32.3 bits (70), Expect = 0.44
 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
 Frame = +3

Query: 261 LLVSSWDCSVRLYDVTANIERHKYNHELPVLDVCFR-DAVHSY-SGGLDQTLKMYDLNAS 434
           LL   +DC+ RL+DV   +E   +  +  V  V F  D  + + SGG   +L+++D+ A+
Sbjct: 220 LLSCGYDCTSRLFDVERGVETQSFKEDEVVGVVKFHPDNCNVFLSGGSKGSLRLWDIRAN 279



 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +3

Query: 285 SVRLYDVTANIERHKYNHEL-PVLDVCF 365
           S+RL+D+ AN   H+Y  +L P+LDV F
Sbjct: 270 SLRLWDIRANKFVHEYVRDLGPILDVEF 297


>At1g29900.1 68414.m03654 carbamoyl-phosphate synthase family
           protein similar to carbamoylphosphate synthetase
           GI:6552726 from [Medicago sativa]; contains Pfam
           profiles PF02786: Carbamoyl-phosphate synthase L chain
           ATP binding domain, PF00289: Carbamoyl-phosphate
           synthase L chain N-terminal domain, PF02787:
           Carbamoyl-phosphate synthetase large chain
           oligomerisation domain
          Length = 1187

 Score = 32.3 bits (70), Expect = 0.44
 Identities = 23/67 (34%), Positives = 31/67 (46%)
 Frame = +3

Query: 396 LDQTLKMYDLNASTETILGEHKGAIRCVEFASELNAVLQEAGMEQSKCGIAEFQTVSALT 575
           LD+ + M    A    I G    +I   E     NA+L E  +EQ K GIA+ +   AL 
Sbjct: 748 LDKHMPMSLSGAGPVRIWGTSPDSIDAAEDRERFNAILDELKIEQPKGGIAKSE-ADALA 806

Query: 576 IREMNGY 596
           I +  GY
Sbjct: 807 IAKEVGY 813


>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
           family protein contains 6 WD-40 repeats (PF00400);
           katanin p80 subunit (GI:3005601) [Strongylocentrotus
           purpuratus]
          Length = 836

 Score = 31.9 bits (69), Expect = 0.58
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = +2

Query: 506 ATGSWDGTVKMWDSRVPNCVGTYNQGNERVYTMSIVGEKFVVGTSGRKNI 655
           A+GS D  +K+WD R   C+ TY      V  +    +   V + G  NI
Sbjct: 117 ASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNI 166



 Score = 28.3 bits (60), Expect = 7.2
 Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
 Frame = +3

Query: 255 QYLLVSSWDCSVRLYDVTANIERHKYN-HELPVLDVCFR-DAVHSYSGGLDQTLKMYDLN 428
           ++    S D +++++D+      H Y  H   V  + F  D     SGG D  +K++DL 
Sbjct: 114 EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLT 173

Query: 429 A-STETILGEHKGAIRCVEF 485
           A    T    H+G I+ ++F
Sbjct: 174 AGKLLTEFKSHEGQIQSLDF 193


>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
           family protein contains 6 WD-40 repeats (PF00400);
           katanin p80 subunit (GI:3005601) [Strongylocentrotus
           purpuratus]
          Length = 837

 Score = 31.9 bits (69), Expect = 0.58
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = +2

Query: 506 ATGSWDGTVKMWDSRVPNCVGTYNQGNERVYTMSIVGEKFVVGTSGRKNI 655
           A+GS D  +K+WD R   C+ TY      V  +    +   V + G  NI
Sbjct: 117 ASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNI 166



 Score = 28.3 bits (60), Expect = 7.2
 Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
 Frame = +3

Query: 255 QYLLVSSWDCSVRLYDVTANIERHKYN-HELPVLDVCFR-DAVHSYSGGLDQTLKMYDLN 428
           ++    S D +++++D+      H Y  H   V  + F  D     SGG D  +K++DL 
Sbjct: 114 EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLT 173

Query: 429 A-STETILGEHKGAIRCVEF 485
           A    T    H+G I+ ++F
Sbjct: 174 AGKLLTEFKSHEGQIQSLDF 193


>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
           family protein contains 7 WD-40 repeats (PF00400); G
           protein beta subunit-like protein, Schistosoma mansoni,
           gb:U30261
          Length = 321

 Score = 31.9 bits (69), Expect = 0.58
 Identities = 12/34 (35%), Positives = 24/34 (70%)
 Frame = +2

Query: 506 ATGSWDGTVKMWDSRVPNCVGTYNQGNERVYTMS 607
           ATGS D TV++WD ++   + T +  N++V++++
Sbjct: 259 ATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVA 292


>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
           regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
           phosphatases pleiotropic regulator PRL2 {Arabidopsis
           thaliana}, GB:Q39190 from [Arabidopsis thaliana];
           contains Pfam PF00400: WD domain, G-beta repeat (7
           copies, 1 weak)
          Length = 479

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +2

Query: 509 TGSWDGTVKMWDSRVPNCVGTYNQGNERVYTMSI 610
           TGS D T+K WD R    + T     + V  M++
Sbjct: 312 TGSHDSTIKFWDLRYGKSMATITNHKKTVRAMAL 345



 Score = 27.5 bits (58), Expect(2) = 0.59
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +2

Query: 521 DGTVKMWDSRVPNCVGTYNQGNERVYTMSIVGEKFVVGTSGRKNIC 658
           D  VK WD      + +Y+     VY +++     VV T GR ++C
Sbjct: 233 DKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVC 278



 Score = 23.0 bits (47), Expect(2) = 0.59
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 509 TGSWDGTVKMWD 544
           TGS D T+K+WD
Sbjct: 187 TGSADRTIKIWD 198


>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
           subunit, putative similar to contains 6 WD-40 repeats
           (PF00400); katanin p80 subunit (GI:3005601)
           [Strongylocentrotus purpuratus]
          Length = 974

 Score = 31.5 bits (68), Expect = 0.77
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
 Frame = +3

Query: 255 QYLLVSSWDCSVRLYDVTAN--IERHKYNHELPVLDVCFR-DAVHSYSGGLDQTLKMYDL 425
           ++L   S D ++R++D      I+ +K  H   +  + F  D     SGGLD  +K++DL
Sbjct: 62  EFLASGSSDTNLRVWDTRKKGCIQTYK-GHTRGISTIEFSPDGRWVVSGGLDNVVKVWDL 120

Query: 426 NASTETILGE---HKGAIRCVEF 485
            A    +L E   H+G IR ++F
Sbjct: 121 TAG--KLLHEFKCHEGPIRSLDF 141



 Score = 31.1 bits (67), Expect = 1.0
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +2

Query: 506 ATGSWDGTVKMWDSRVPNCVGTYNQGNERVYTMSIVGEKFVVGTSGRKNI 655
           A+GS D  +++WD+R   C+ TY      + T+    +   V + G  N+
Sbjct: 65  ASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNV 114


>At5g51740.1 68418.m06416 peptidase M48 family protein contains Pfam
           domain, PF01435: Peptidase family M48
          Length = 442

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -2

Query: 725 SWLDIGVRIPPLIYMPHVTNVPYKYFYVXMYQLRTFR 615
           SW  +G     + Y P ++  P +Y+YV  YQ+R F+
Sbjct: 57  SWTSLGRNTNRIAYNPFLSQ-PKRYYYVDRYQVRHFK 92


>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
           family protein similar to katanin p80 subunit
           [Strongylocentrotus purpuratus] GI:3005601; contains
           Pfam profile PF00400: WD domain, G-beta repeat
          Length = 871

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = +2

Query: 506 ATGSWDGTVKMWDSRVPNCVGTYNQGNERVYTMSIVGEKFVVGTSGRKNI 655
           A+GS D  +K+WD R   C+ TY      V  +    +   + + G  N+
Sbjct: 210 ASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNV 259


>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
           family protein contains seven G-protein beta WD-40
           repeats; similar to uncharacterized KIAA1449 protein
           (gi:7959157) [Homo sapiens]
          Length = 753

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
 Frame = +3

Query: 255 QYLLVSSWDCSVRLYDVTANIERHKYN-HELPVLDV-CFRDAVHSYSGGLDQTLKMYDLN 428
           ++ L  S D  +RL+D+      H Y  H   V  + C     H YSGG DQ L + DL 
Sbjct: 268 RFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYLTDL- 326

Query: 429 ASTETIL 449
           A+ E++L
Sbjct: 327 ATRESVL 333



 Score = 28.7 bits (61), Expect = 5.4
 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = +2

Query: 509 TGSWDGTVKMW--DSRVPNCVGTYNQGNERVYTMSIVGEKFVVGTS 640
           TGS DGT+K W  D     C  T+    + V   ++ GE  +V  S
Sbjct: 57  TGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALAGESTLVSCS 102


>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
           family protein contains seven G-protein beta WD-40
           repeats; similar to uncharacterized KIAA1449 protein
           (gi:7959157) [Homo sapiens]
          Length = 753

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
 Frame = +3

Query: 255 QYLLVSSWDCSVRLYDVTANIERHKYN-HELPVLDV-CFRDAVHSYSGGLDQTLKMYDLN 428
           ++ L  S D  +RL+D+      H Y  H   V  + C     H YSGG DQ L + DL 
Sbjct: 268 RFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYLTDL- 326

Query: 429 ASTETIL 449
           A+ E++L
Sbjct: 327 ATRESVL 333



 Score = 28.7 bits (61), Expect = 5.4
 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = +2

Query: 509 TGSWDGTVKMW--DSRVPNCVGTYNQGNERVYTMSIVGEKFVVGTS 640
           TGS DGT+K W  D     C  T+    + V   ++ GE  +V  S
Sbjct: 57  TGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALAGESTLVSCS 102


>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
           regulator 1 (PRL1) identical to PP1/PP2A phosphatases
           pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
           thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
           contains Pfam PF00400: WD domain, G-beta repeat (7
           copies)
          Length = 486

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +2

Query: 509 TGSWDGTVKMWDSRVPNCVGTYNQGNERVYTMSI 610
           TGS D T+K WD R    + T     + V  M++
Sbjct: 319 TGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTL 352



 Score = 26.2 bits (55), Expect(2) = 1.3
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +2

Query: 521 DGTVKMWDSRVPNCVGTYNQGNERVYTMSIVGEKFVVGTSGRKNIC 658
           D  VK WD      + +Y+     VY +++     V+ T GR ++C
Sbjct: 239 DKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVC 284



 Score = 23.0 bits (47), Expect(2) = 1.3
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 509 TGSWDGTVKMWD 544
           TGS D T+K+WD
Sbjct: 193 TGSADRTIKIWD 204


>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
           family protein contains Pfam PF00400: WD domain, G-beta
           repeat (4 copies, 1 weak); similar to Will die slowly
           protein. {Drosophila melanogaster} (SP:Q9V3J8)
           {Drosophila melanogaster}
          Length = 331

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +2

Query: 500 CSATGSWDGTVKMWDSRVPNCVG 568
           C  +GS D TV +WD RV  C G
Sbjct: 134 CFISGSLDRTVLLWDQRVEKCQG 156


>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
           family protein contains Pfam PF00400: WD domain, G-beta
           repeat (4 copies, 1 weak); similar to Will die slowly
           protein. {Drosophila melanogaster} (SP:Q9V3J8)
           {Drosophila melanogaster}
          Length = 328

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +2

Query: 500 CSATGSWDGTVKMWDSRVPNCVG 568
           C  +GS D TV +WD RV  C G
Sbjct: 131 CFISGSLDRTVLLWDQRVEKCQG 153


>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
           PF00400: WD domain, G-beta repeat; similar to WD-repeat
           protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
           sapiens]
          Length = 709

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 14/66 (21%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = +3

Query: 291 RLYDVTANIERHKYNHELPVLDVCFRDAVHSYSGGLDQTLKMYDLNASTETI-LGEHKGA 467
           +++ ++   +     H   +LD+ + +     S  +D+T++++ + +S E I +  HK  
Sbjct: 347 KVFSISETPQHEFRGHTGEILDLSWSEKGFLLSSSVDETVRLWRVGSSDECIRVFSHKSF 406

Query: 468 IRCVEF 485
           + CV F
Sbjct: 407 VTCVAF 412


>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
           family protein similar to Vegetatible incompatibility
           protein HET-E-1 (SP:Q00808) {Podospora anserina};
           contains 5 WD-40 repeats (PF00400); similar to  beta
           transducin-like protein HET-E2C*4
           (GP:17225206)[Podospora anserina]
          Length = 530

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
 Frame = +2

Query: 509 TGSWDGTVKMWDSRV--PNCVGTYNQG 583
           TGS+D TVK+WD+RV   N +   N G
Sbjct: 196 TGSYDHTVKVWDARVHTSNWIAEINHG 222


>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
           family protein similar to WD-repeat protein 5
           (SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
           repeats
          Length = 367

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
 Frame = +2

Query: 509 TGSWDGTVKMWDSRVPNCV---GTYNQGNE-RVYTMSIVG-EKFVVGTSGRKNICM 661
           TGS DGT ++WD +   CV   G+ ++ +  RV +M++ G E ++V   G KN+ +
Sbjct: 218 TGSEDGTARIWDCKTGKCVKVIGSQDKKSRLRVSSMALDGSESWLVCGQG-KNLAL 272


>At1g74750.1 68414.m08661 pentatricopeptide (PPR) repeat-containing
           protein low similarity to post-transcriptional control
           of chloroplast gene expression CRP1 [Zea mays]
           GI:3289002; contains Pfam profile PF01535: PPR repeat
          Length = 855

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -1

Query: 741 ETLVGIVVGYWSEDPSFDLHAPCYERPIQIFLRPDVPTTN 622
           E + G++V  W +  + D     Y+  +Q  LRP+VPT N
Sbjct: 569 EPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCN 608


>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
           family protein Similar to En/Spm-like transposon protein
           (gi:2739374)[Arabidopsis thaliana]; similar to
           GTP-binding regulatory protein and WD-repeat protein;
           contains 7 WD-40 repeats
          Length = 388

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
 Frame = +3

Query: 267 VSSWDCSVRLYDVTANIERHKYNHELPVLDVCFRDA-------VHSYSGGLDQTLKMYDL 425
           V  W CS + Y   A +E H     +  L   FRD+        H YSGGLD  +K++ +
Sbjct: 327 VRLWKCSAKDYSCLAMLEGHL--GPVKCLTGAFRDSRKADEASYHIYSGGLDSQVKVWQV 384


>At3g24900.1 68416.m03122 disease resistance family protein / LRR
           family protein contains leucine rich-repeat domains
           Pfam:PF00560, INTERPRO:IPR001611; similar to Cf-2.2
           [Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780
          Length = 884

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
 Frame = +2

Query: 71  NLR-LEYSQINNSIIVLISVFIPHTRLLPQ*LSHGWRSRAPSSN*KAYPKTLFRALNLHR 247
           NL+ L  S +N S  + + +F     LL   LS GW S+A  S     P TL   L  H 
Sbjct: 343 NLKELHLSFLNTSYPINLKLFSSLKYLLLLDLSGGWISQASLSLDSYIPSTLEALLLKHC 402

Query: 248 NLTVLAGIFMGL 283
           N++V   I   L
Sbjct: 403 NISVFPNILKTL 414


>At2g34260.2 68415.m04192 transducin family protein / WD-40 repeat
           family protein similar to Vegetatible incompatibility
           protein HET-E-1 (SP:Q00808) {Podospora anserina}
          Length = 296

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +2

Query: 506 ATGSWDGTVKMWDSRVPNCVGTYNQGNERVYTMSIVGEKF-VVGTSG 643
           A+G   G VK+WD+R  +C   +N   + +  M+   +   +V TSG
Sbjct: 52  ASGDDKGCVKIWDTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSG 98


>At2g34260.1 68415.m04191 transducin family protein / WD-40 repeat
           family protein similar to Vegetatible incompatibility
           protein HET-E-1 (SP:Q00808) {Podospora anserina}
          Length = 353

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +2

Query: 506 ATGSWDGTVKMWDSRVPNCVGTYNQGNERVYTMSIVGEKF-VVGTSG 643
           A+G   G VK+WD+R  +C   +N   + +  M+   +   +V TSG
Sbjct: 109 ASGDDKGCVKIWDTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSG 155


>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
           PF00400: WD domain, G-beta repeat; similar to WD-repeat
           protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
           sapiens]
          Length = 654

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
 Frame = +3

Query: 258 YLLVSSWDCSVRLYDVTANIERHKYNHELPVLDVCFRDAVHSY--SGGLDQTLKMYDLNA 431
           YLL +S D +VRL+ V +N     + H   V  V F     +Y  SG +D  +++++++ 
Sbjct: 341 YLLSASMDKTVRLWKVGSNDCLGVFAHNSYVTSVQFNPVNENYFMSGSIDGKVRIWNISG 400

Query: 432 STETILGEHKGAIRCV 479
            +     + K  I  V
Sbjct: 401 CSVVDWADLKDIISAV 416


>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
           protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
           contains Zinc finger C-x8-C-x5-C-x3-H type domain
           (PF00642); identical to zfwd4 protein (GI:12057170)
           [Arabidopsis thaliana]
          Length = 419

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +3

Query: 384 YSGGLDQTLKMYDLNA-STETILGEHKGAI 470
           YSG +D+T+KM+DLN       L +H G +
Sbjct: 272 YSGSVDKTIKMWDLNTLQCIMTLKQHTGTV 301



 Score = 29.5 bits (63), Expect = 3.1
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +2

Query: 509 TGSWDGTVKMWDSRVPNCVGTYNQGNERVYTMSIVGEKFVVGTS 640
           +GS D T+KMWD     C+ T  Q    V T  +  +K ++ +S
Sbjct: 273 SGSVDKTIKMWDLNTLQCIMTLKQHTGTV-TSLLCWDKCLISSS 315


>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
           WD-40 repeats (PF00400); similiar to rab11 binding
           protein (GI:4512103) [Bos taurus]
          Length = 903

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 11/47 (23%), Positives = 26/47 (55%)
 Frame = +3

Query: 348 VLDVCFRDAVHSYSGGLDQTLKMYDLNASTETILGEHKGAIRCVEFA 488
           +LD+ +  +    S  +D+T++++D+   T   L  H   + C++F+
Sbjct: 509 ILDLSWSKSQLLLSSSMDKTVRLWDIETKTCLKLFAHNDYVTCIQFS 555


>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
           family protein contains 5 WD-40 repeats (PF00400);
           similar to Will die slowly protein
           (SP:Q9V3J8)[Drosophila melanogaster]
          Length = 511

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +2

Query: 509 TGSWDGTVKMWDSRVPNCVGTY 574
           T S D TVK+WDS+  +C+ T+
Sbjct: 364 TASSDCTVKVWDSKTTDCLQTF 385


>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
           protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
           [Arabidopsis thaliana]
          Length = 430

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +2

Query: 509 TGSWDGTVKMWDSRVPNCVGTYNQGNE 589
           T S D TV++WD     C G  N G E
Sbjct: 161 TASKDETVRIWDCASGQCTGVLNLGGE 187


>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
           subunit 2 / TGF-beta receptor interacting protein 1 /
           eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
           eukaryotic translation initiation factor 3 subunit 2
           (SP:Q38884) {Arabidopsis thaliana}; contains Pfam
           PF00400: WD domain, G-beta repeat (5 copies)
          Length = 254

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +3

Query: 366 RDAVHSYSGGLDQTLKMYDLNASTETILGEHKGAIRCVEFA 488
           RD+    +G  DQT K++D+ +  E    +     R V+FA
Sbjct: 62  RDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFA 102


>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
           subunit 2 / TGF-beta receptor interacting protein 1 /
           eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
           eukaryotic translation initiation factor 3 subunit 2
           (SP:Q38884) {Arabidopsis thaliana}; contains Pfam
           PF00400: WD domain, G-beta repeat (5 copies)
          Length = 328

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +3

Query: 366 RDAVHSYSGGLDQTLKMYDLNASTETILGEHKGAIRCVEFA 488
           RD+    +G  DQT K++D+ +  E    +     R V+FA
Sbjct: 62  RDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFA 102


>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
           subunit 2 / TGF-beta receptor interacting protein 1 /
           eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
           eukaryotic translation initiation factor 3 subunit 2
           (SP:Q38884) {Arabidopsis thaliana}; contains Pfam
           PF00400: WD domain, G-beta repeat (5 copies)
          Length = 328

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +3

Query: 366 RDAVHSYSGGLDQTLKMYDLNASTETILGEHKGAIRCVEFA 488
           RD+    +G  DQT K++D+ +  E    +     R V+FA
Sbjct: 62  RDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFA 102


>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
           family protein similar to Pop3 (GI:3434986)
           [Schizosaccharomyces pombe]; contains Pfam PF00400: WD
           domain, G-beta repeat (6 copies, 2 weak);
          Length = 312

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +2

Query: 509 TGSWDGTVKMWDSRVPNC 562
           +GS DG+VK+WD RV  C
Sbjct: 101 SGSEDGSVKIWDLRVREC 118


>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
           receptor (PEX7) identical to peroxisomal targeting
           signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
           thaliana]; WD-40 repeat protein family member; contains
           6 WD-40 repeats (PF00400); similar to peroxismal
           targeting signal 2 receptor (PTS2R) (Peroxin-7)
           (PEX7)(SP:O00628) [Homo sapiens]
          Length = 317

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 509 TGSWDGTVKMWDSRVPNCVGTYNQGNERVY 598
           T SWD TVK+W    P  V T+ +    VY
Sbjct: 124 TSSWDDTVKLWAMDRPASVRTFKEHAYCVY 153


>At2g10500.1 68415.m01106 hypothetical protein similar to At2g10840,
           At5g35280, At2g05860, At4g07310, At4g07430, At1g39270
          Length = 194

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
 Frame = -1

Query: 747 YGETLVGIVVGYWSEDPSFD---LHAPCYERPIQ-IFLRPDVPTTN 622
           YG  ++ +V+G+W  D  FD       C   PI  +F  PD+P +N
Sbjct: 144 YGGGVIVVVLGWWKIDRYFDGPKNVRVCTAGPISTVFPDPDIPKSN 189


>At2g05860.1 68415.m00635 hypothetical protein similar to At2g10840,
           At5g35280, At2g10500, At4g07310, At4g07430, At1g39270
          Length = 238

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
 Frame = -1

Query: 747 YGETLVGIVVGYWSEDPSFD---LHAPCYERPIQ-IFLRPDVPTTN 622
           YG  ++ +V+G+W  D  FD       C   PI  +F  PD+P +N
Sbjct: 188 YGGGVIVVVLGWWKIDRYFDGPKNVRVCTAGPISTVFPDPDIPESN 233


>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
           PF00400: WD domain, G-beta repeat; similar to WD-repeat
           protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
           sapiens]; similar to rab11 binding protein GI:4512103
           from [Bos taurus]
          Length = 593

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 14/52 (26%), Positives = 24/52 (46%)
 Frame = +3

Query: 330 YNHELPVLDVCFRDAVHSYSGGLDQTLKMYDLNASTETILGEHKGAIRCVEF 485
           Y H   VLD+ + D+    S   D+T++++         +  H   + CVEF
Sbjct: 269 YGHTGDVLDLAWSDSNLLLSASKDKTVRLWRTGCDQCLHVFHHNNYVTCVEF 320


>At1g12820.1 68414.m01489 transport inhibitor response protein,
           putative E3 ubiquitin ligase SCF complex F-box subunit;
           similar to transport inhibitor response 1 GI:2352492
           from [Arabidopsis thaliana]
          Length = 577

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -2

Query: 647 YVXMYQLRTFRQLCSLCIPVHFPDCKCRHSLELCY 543
           Y  +  L  F ++  LC+P  +P C+   SL L Y
Sbjct: 259 YTSLRSLSGFLEVAPLCLPAFYPICQNLISLNLSY 293


>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
           protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
           contains Zinc finger C-x8-C-x5-C-x3-H type domain
           (PF00642); identical to zfwd3 protein (GP:12057168)
           {Arabidopsis thaliana}
          Length = 472

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +3

Query: 384 YSGGLDQTLKMYDLNA-STETILGEHKGAI 470
           YSG +D+T+K++DLN       L +H G +
Sbjct: 326 YSGSVDKTIKVWDLNTLQCRMTLKQHIGTV 355


>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
           protein contains G-protein beta WD-40 repeats
          Length = 539

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 509 TGSWDGTVKMWDSRVPNCVGT 571
           +GSWD +V++WD     CV T
Sbjct: 272 SGSWDMSVRIWDRSSMKCVKT 292


>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
           family protein contains 7 WD-40 repeats (PF00400);
           similar to Myosin heavy chain kinase B (MHCK
           B).(SP:P90648) [Dictyostelium discoideum]
          Length = 495

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = +2

Query: 512 GSWDGTVKMWDSRVPNCVGTYNQGNE-RVYTMSIVGEKFVVGTSGRKNICMGR 667
           GS DG V  W+    +  G   +G++  V  + I G   + G S  KNIC+ R
Sbjct: 342 GSSDGLVNYWERSKRSFTGGILKGHKSAVLCLGIAGNLLLSG-SADKNICVWR 393


>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
           family protein contains 3 WD-40 repeats (PF00400); WDVCF
           variant 1 (gi:12006981) [Mus musculus]
          Length = 386

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
 Frame = +3

Query: 258 YLLVSSWDCSVRLYDV-TANIERHKYN-HELPVLDVCFRDAVHS-YSGGLDQTLKMYDLN 428
           ++L    D S+ L+D+  A I       H  PVL +    +     SGG D  + MY+LN
Sbjct: 233 HVLAGYEDGSILLWDIRNAKIPLTSVKFHSEPVLSLSVASSCDGGISGGADDKIVMYNLN 292

Query: 429 AST 437
            ST
Sbjct: 293 HST 295


>At5g52250.1 68418.m06485 transducin family protein / WD-40 repeat
           family protein contains 7 WD-40 repeats (PF00400);
           similar to photomorphogenesis repressor PnCOP1
           (GI:11127996) [Ipomoea nil]
          Length = 385

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +2

Query: 506 ATGSWDGTVKMWDSR 550
           A+GS DGTV+MWD R
Sbjct: 184 ASGSDDGTVQMWDPR 198


>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
           protein (ZFWD2), putative 99.8% identical to zfwd2
           protein (GI:12057166) [Arabidopsis thaliana]; contains 6
           copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
           contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
           (and similar) domain
          Length = 437

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +2

Query: 509 TGSWDGTVKMWDSRVPNCVGTYNQGNE 589
           TGS D T+++WD     C G    G E
Sbjct: 168 TGSKDETLRVWDCASGQCTGVLKLGGE 194


>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
           WD-40 repeats (PF00400); rab11 binding protein, Bos
           taurus, EMBL:AF117897
          Length = 905

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/46 (26%), Positives = 25/46 (54%)
 Frame = +3

Query: 348 VLDVCFRDAVHSYSGGLDQTLKMYDLNASTETILGEHKGAIRCVEF 485
           VLD+ +  +    S  +D+T++++D+   +   L  H   + CV+F
Sbjct: 522 VLDLSWSRSQLLLSSSMDKTVRLWDIETQSCLKLFAHNDYVTCVQF 567


>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
           subunit (GB1) / GTP-binding protein beta subunit (AGB1)
           / transducin contains 7 WD-40 repeats (PF00400);
           identical to Guanine nucleotide-binding protein beta
           subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
           al, PNAS 91:9954 (1994)
          Length = 347

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = +2

Query: 509 TGSWDGTVKMWDSRVPN-CVGTYNQGNERVYTMSIVGEKFVVGTSGRKNIC 658
           +GS D T ++WD+R  +  V T++     V T+    + +  GT      C
Sbjct: 222 SGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTC 272


>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
           subunit (GB1) / GTP-binding protein beta subunit (AGB1)
           / transducin contains 7 WD-40 repeats (PF00400);
           identical to Guanine nucleotide-binding protein beta
           subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
           al, PNAS 91:9954 (1994)
          Length = 315

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = +2

Query: 509 TGSWDGTVKMWDSRVPN-CVGTYNQGNERVYTMSIVGEKFVVGTSGRKNIC 658
           +GS D T ++WD+R  +  V T++     V T+    + +  GT      C
Sbjct: 160 SGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTC 210


>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
           subunit (GB1) / GTP-binding protein beta subunit (AGB1)
           / transducin contains 7 WD-40 repeats (PF00400);
           identical to Guanine nucleotide-binding protein beta
           subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
           al, PNAS 91:9954 (1994)
          Length = 377

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = +2

Query: 509 TGSWDGTVKMWDSRVPN-CVGTYNQGNERVYTMSIVGEKFVVGTSGRKNIC 658
           +GS D T ++WD+R  +  V T++     V T+    + +  GT      C
Sbjct: 222 SGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTC 272


>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
           A-related contains 7 WD-40 repeats (PF00400); similar to
           phytochrome A supressor spa1  (GI:4809171) [Arabidopsis
           thaliana]; contains non-consensus (GC) donor splice
           sites at introns 4 and 6
          Length = 1017

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +2

Query: 506 ATGSWDGTVKMWDSRVPNCVGT 571
           A+GS D +VK+W+    NC+GT
Sbjct: 813 ASGSDDCSVKLWNINERNCLGT 834


>At2g46560.1 68415.m05808 transducin family protein / WD-40 repeat
            family protein similar to CPY (GI:3096961) {Chironomus
            thummi}; contains Pfam PF00400: WD domain, G-beta repeat
            (8 copies, 3 weak)|9780477|gb|BE522499.1|BE522499
          Length = 2471

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +2

Query: 509  TGSWDGTVKMWDSRVPNCVGTYNQGNER 592
            TGS DG VK+WD++    +  + + +ER
Sbjct: 2392 TGSKDGEVKLWDAKAAKLIHHWPKLHER 2419


>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
           subunit 2, putative / eIF-3 beta, putative / eIF3i,
           putative strong similarity to SP|Q38884 Eukaryotic
           translation initiation factor 3 subunit 2 (eIF-3 beta)
           (eIF3 p36) (eIF3i) (TGF-beta receptor interacting
           protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
           Pfam PF00400: WD domain, G-beta repeat (5
           copies)|19799885|gb|AU231175.1|AU231175
          Length = 355

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 509 TGSWDGTVKMWDSRVPNCVGTY 574
           TGS D T K+WD R    + TY
Sbjct: 237 TGSHDKTAKLWDMRTLTLIKTY 258


>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
           PF00400: WD domain, G-beta repeat; similar to WD-repeat
           protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
           sapiens]
          Length = 647

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
 Frame = +3

Query: 258 YLLVSSWDCSVRLYDVTANIERHKYNHELPVLDVCFRDAVHSY--SGGLDQTLKMYDL 425
           YLL SS D +VRL+ V  +     + H   V  V F     +Y  SG +D  ++++D+
Sbjct: 335 YLLSSSVDETVRLWRVGCDECLRTFTHNNFVTCVAFNPVDDNYFISGSIDGKVRIWDV 392


>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
           PF00400: WD domain, G-beta repeat; similar to WD-repeat
           protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
           sapiens]
          Length = 647

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
 Frame = +3

Query: 258 YLLVSSWDCSVRLYDVTANIERHKYNHELPVLDVCFRDAVHSY--SGGLDQTLKMYDL 425
           YLL SS D +VRL+ V  +     + H   V  V F     +Y  SG +D  ++++D+
Sbjct: 335 YLLSSSVDETVRLWRVGCDECLRTFTHNNFVTCVAFNPVDDNYFISGSIDGKVRIWDV 392


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,604,165
Number of Sequences: 28952
Number of extensions: 455963
Number of successful extensions: 1387
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 1173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1378
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2067932800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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