Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10413
(805 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g50920.1 68414.m05725 GTP-binding protein-related similar to ... 161 7e-40
At1g10300.1 68414.m01160 GTP-binding protein-related contains si... 148 4e-36
At1g80770.1 68414.m09476 expressed protein 62 6e-10
At4g39520.1 68417.m05588 GTP-binding protein, putative similar t... 51 1e-06
At3g23860.1 68416.m02999 GTP-binding protein-related low similar... 46 4e-05
At1g72660.1 68414.m08403 developmentally regulated GTP-binding p... 45 5e-05
At1g17470.1 68414.m02143 developmentally regulated GTP-binding p... 45 5e-05
At1g07620.1 68414.m00817 GTP1/OBG family protein similar to SP|P... 44 2e-04
At3g12080.1 68416.m01504 GTP-binding family protein contains Pfa... 40 0.001
At5g18570.1 68418.m02195 GTP1/OBG family protein similar to SP|P... 38 0.010
At3g07050.1 68416.m00837 GTP-binding family protein contains Pfa... 36 0.042
At5g66470.1 68418.m08382 expressed protein 33 0.17
At1g52980.1 68414.m05995 GTP-binding family protein contains Pfa... 33 0.17
At5g39960.1 68418.m04846 GTP-binding family protein contains Pfa... 33 0.29
At4g15810.1 68417.m02406 chloroplast outer membrane protein, put... 32 0.51
At1g30580.1 68414.m03741 expressed protein 32 0.51
At4g02790.1 68417.m00379 GTP-binding family protein contains Pfa... 31 0.68
At1g78010.1 68414.m09091 tRNA modification GTPase, putative simi... 31 0.68
At3g21700.3 68416.m02737 expressed protein 31 0.90
At3g21700.2 68416.m02735 expressed protein 31 0.90
At3g21700.1 68416.m02736 expressed protein 31 0.90
At3g47450.2 68416.m05160 expressed protein 30 1.6
At3g47450.1 68416.m05159 expressed protein 30 1.6
At4g13030.2 68417.m02034 expressed protein 30 2.1
At4g13030.1 68417.m02033 expressed protein 30 2.1
At4g01560.1 68417.m00202 brix domain-containing protein contains... 29 2.7
At3g09660.1 68416.m01145 minichromosome maintenance family prote... 29 4.8
At4g32500.1 68417.m04626 potassium channel protein, putative sim... 28 6.3
At2g41670.1 68415.m05148 GTP-binding family protein contains Pfa... 28 6.3
At2g22870.1 68415.m02715 expressed protein 28 6.3
At2g11810.1 68415.m01269 1,2-diacylglycerol 3-beta-galactosyltra... 28 6.3
At5g45520.1 68418.m05591 hypothetical protein 28 8.3
>At1g50920.1 68414.m05725 GTP-binding protein-related similar to
GTP-binding protein SP:Q99ME9 from [Mus musculus]
Length = 671
Score = 161 bits (390), Expect = 7e-40
Identities = 70/92 (76%), Positives = 83/92 (90%)
Frame = +1
Query: 508 EQVRQHLARLPSIDPYTRTIIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTG 687
EQ+RQH+ARLPSIDP TRT++ICG+PNVGKSSF+NK+TRADV+VQPYAFTTKSL+VGHT
Sbjct: 152 EQIRQHMARLPSIDPNTRTVLICGYPNVGKSSFMNKVTRADVDVQPYAFTTKSLFVGHTD 211
Query: 688 YKYLRWQVIDTPGILDHPLEETQCYEMPAVTA 783
YKYLR+QVIDTPGILD P E+ EM ++TA
Sbjct: 212 YKYLRYQVIDTPGILDRPFEDRNIIEMCSITA 243
Score = 133 bits (322), Expect = 1e-31
Identities = 58/86 (67%), Positives = 73/86 (84%)
Frame = +2
Query: 257 EFPKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYGDSLYRCK 436
EFP+L+ +HPFY DL++VLY+KDHYKL LGQ+NTAR+LI ++KDYV+LLKYGDSLYRCK
Sbjct: 68 EFPRLEQIHPFYGDLLHVLYNKDHYKLALGQVNTARNLISKISKDYVKLLKYGDSLYRCK 127
Query: 437 QLKRAALGRMATIMKRQGANLTYLNR 514
LK AALGRM T++KR +L YL +
Sbjct: 128 CLKVAALGRMCTVLKRITPSLAYLEQ 153
Score = 104 bits (249), Expect = 8e-23
Identities = 47/66 (71%), Positives = 56/66 (84%)
Frame = +3
Query: 57 MSLYNFKKIAVVPTAKDFIDIILSKTQRKTPTVVHKHYKISRIRGFYIRKVKYTQQNFHD 236
M YNFK+I VVP K+F+DIILS+TQR+TPTVVHK YKI+R+R FY+RKVKYTQ NFH
Sbjct: 1 MVQYNFKRITVVPNGKEFVDIILSRTQRQTPTVVHKGYKINRLRQFYMRKVKYTQTNFHA 60
Query: 237 RLSRII 254
+LS II
Sbjct: 61 KLSAII 66
>At1g10300.1 68414.m01160 GTP-binding protein-related contains
similarity to nucleolar GTP-binding protein 1 SP: Q9BZE4
from [Homo sapiens];
Length = 687
Score = 148 bits (359), Expect = 4e-36
Identities = 66/92 (71%), Positives = 80/92 (86%)
Frame = +1
Query: 508 EQVRQHLARLPSIDPYTRTIIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTG 687
EQVRQH+ARLPSIDP TRT++ICG PNVGKSSF+NK+TRADV VQPYAFTTKSL++GHT
Sbjct: 181 EQVRQHIARLPSIDPNTRTLLICGCPNVGKSSFMNKVTRADVAVQPYAFTTKSLFLGHTD 240
Query: 688 YKYLRWQVIDTPGILDHPLEETQCYEMPAVTA 783
YK LR+QVIDTPG+LD +E+ E+ ++TA
Sbjct: 241 YKCLRYQVIDTPGLLDREIEDRNIIELCSITA 272
Score = 124 bits (299), Expect = 7e-29
Identities = 55/86 (63%), Positives = 70/86 (81%)
Frame = +2
Query: 257 EFPKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYGDSLYRCK 436
EFP+L ++ PFY DL++VLY+KDHYKL LGQ+NTA++ I +A DYV+LLK+GDSLYRCK
Sbjct: 97 EFPRLKEIQPFYEDLLHVLYNKDHYKLALGQVNTAKNKISKIAMDYVKLLKHGDSLYRCK 156
Query: 437 QLKRAALGRMATIMKRQGANLTYLNR 514
LK AALGRM T+MK G +L YL +
Sbjct: 157 CLKVAALGRMCTVMKGIGPSLAYLEQ 182
Score = 94.3 bits (224), Expect = 8e-20
Identities = 41/66 (62%), Positives = 54/66 (81%)
Frame = +3
Query: 57 MSLYNFKKIAVVPTAKDFIDIILSKTQRKTPTVVHKHYKISRIRGFYIRKVKYTQQNFHD 236
M YNFKKI VVP K F+DI+LS+TQR+TPTVVHK +I ++R FY+RKVK+T+ NF++
Sbjct: 30 MVKYNFKKITVVPNGKQFVDIVLSRTQRQTPTVVHKGDRICKLRSFYMRKVKFTESNFNE 89
Query: 237 RLSRII 254
+LS II
Sbjct: 90 KLSAII 95
>At1g80770.1 68414.m09476 expressed protein
Length = 451
Score = 61.7 bits (143), Expect = 6e-10
Identities = 28/69 (40%), Positives = 41/69 (59%)
Frame = +1
Query: 526 LARLPSIDPYTRTIIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTGYKYLRW 705
L +P +D T+ + G PNVGKSS + ++ E+ Y FTT+ + +GH Y R+
Sbjct: 243 LRAMPVVDLEMPTLCLVGAPNVGKSSLVRILSTGKPEICNYPFTTRGILMGHIVLNYQRF 302
Query: 706 QVIDTPGIL 732
QV DTPG+L
Sbjct: 303 QVTDTPGLL 311
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/94 (19%), Positives = 42/94 (44%)
Frame = +2
Query: 209 EIYPAELPRPTVQNY*EFPKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDNVAK 388
+ + EL P FP+ +HP+ L+++ Y+ LG+++ R + +V K
Sbjct: 137 DAFMKELALPLKGYMESFPRKKLLHPYERSLIDLTLGDGKYEEVLGKVDVLRKKVQSVGK 196
Query: 389 DYVRLLKYGDSLYRCKQLKRAALGRMATIMKRQG 490
++ L S ++ + ++ + ++QG
Sbjct: 197 EHASLCAKALSKKEAEERLSEGVEKLELVFQQQG 230
>At4g39520.1 68417.m05588 GTP-binding protein, putative similar to
SP|Q9Y295 Developmentally regulated GTP-binding protein
1 (DRG 1) {Homo sapiens}; contains Pfam profiles
PF02824: TGS domain, PF01018: GTP1/OBG family
Length = 369
Score = 50.8 bits (116), Expect = 1e-06
Identities = 23/55 (41%), Positives = 35/55 (63%)
Frame = +1
Query: 571 ICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTGYKYLRWQVIDTPGILD 735
+ GFP+VGKS+ +NK+T EV Y FTT + G Y+ + Q++D PGI++
Sbjct: 70 LVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPGIIE 124
>At3g23860.1 68416.m02999 GTP-binding protein-related low similarity
to SP|Q99ME9 Nucleolar GTP-binding protein 1 (Chronic
renal failure gene protein) {Mus musculus}
Length = 230
Score = 45.6 bits (103), Expect = 4e-05
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Frame = +2
Query: 257 EFPKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYG---DSLY 427
EFP + + P YA L++ Y+ HY + Q++ + L++ ++ +YV LL+ DS
Sbjct: 72 EFPCVRHLDPVYASLLHQRYNMYHYDRAVRQVSVTQTLVNVMSFNYVDLLRKDDDCDSRD 131
Query: 428 RCKQLKRAALGRMATIMK 481
+C+ L AL RM T K
Sbjct: 132 KCRSLGVTALARMLTFAK 149
>At1g72660.1 68414.m08403 developmentally regulated GTP-binding
protein, putative very strong similarity to
developmentally regulated GTP binding protein (DRG1)
[Arabidopsis thaliana] GI:2345150
Length = 399
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +1
Query: 565 IIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTGYKYLRWQVIDTPGILD 735
+ + GFP+VGKS+ + +T E Y FTT + G Y + Q++D PGI++
Sbjct: 65 VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGVIHYNDTKIQLLDLPGIIE 121
>At1g17470.1 68414.m02143 developmentally regulated GTP-binding
protein (DRG1) identical to developmentally regulated
GTP binding protein (DRG1) [Arabidopsis thaliana]
GI:2345150
Length = 399
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +1
Query: 565 IIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTGYKYLRWQVIDTPGILD 735
+ + GFP+VGKS+ + +T E Y FTT + G Y + Q++D PGI++
Sbjct: 65 VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGVIHYNDTKIQLLDLPGIIE 121
>At1g07620.1 68414.m00817 GTP1/OBG family protein similar to
SP|P20964 Spo0B-associated GTP-binding protein {Bacillus
subtilis}; contains Pfam profile PF01018: GTP1/OBG
family
Length = 1016
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/54 (37%), Positives = 29/54 (53%)
Frame = +1
Query: 571 ICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTGYKYLRWQVIDTPGIL 732
+ G PN GKS+ + ++RA V YAFTT +G+ Y V D PG++
Sbjct: 831 LVGMPNAGKSTLLGALSRAKPRVGHYAFTTLRPNLGNVNYDDFSMTVADIPGLI 884
>At3g12080.1 68416.m01504 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 663
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = +1
Query: 553 YTRTIIICGFPNVGKSSFINKITRAD-VEVQPYAFTTK-SLYVGHTGYKYLRWQVIDTPG 726
Y I I G PNVGKSS +N + R D V P + TT+ ++ TG ++++IDT G
Sbjct: 367 YIPAIAIIGRPNVGKSSILNALVREDRTIVSPVSGTTRDAIDAEFTGPDGEKFRLIDTAG 426
Query: 727 I 729
I
Sbjct: 427 I 427
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +1
Query: 565 IIICGFPNVGKSSFINKI---TRADVEVQPYAFTTKSLYVGHTGYKYLRWQVIDTPGIL 732
+ I G PNVGKS+ N++ RA V +P T LY G + + + V+DT G++
Sbjct: 161 VAIVGRPNVGKSALFNRLVGENRAIVVDEP-GVTRDRLY-GRSYWGDQEFVVVDTGGVM 217
>At5g18570.1 68418.m02195 GTP1/OBG family protein similar to
SP|P20964 Spo0B-associated GTP-binding protein {Bacillus
subtilis}; contains Pfam profile PF01018: GTP1/OBG
family
Length = 681
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 571 ICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTGYKYLRWQVI-DTPGILD 735
I G PN GKS+ ++ I+ A + Y FTT +G + Y V+ D PG+L+
Sbjct: 383 IVGAPNAGKSTLLSVISAAQPTIANYPFTTLLPNLGVVSFDYDSTMVVADLPGLLE 438
>At3g07050.1 68416.m00837 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 582
Score = 35.5 bits (78), Expect = 0.042
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 562 TIIICGFPNVGKSSFINKITRAD-VEVQPYAFTTKSLYVGHTGYKYLRWQVIDTPGIL 732
T+ I G PNVGKSS IN + RA V V T+SL H +++D PG++
Sbjct: 255 TVGIIGLPNVGKSSLINSLKRAHVVNVGATPGLTRSLQEVHLDKNV---KLLDCPGVV 309
>At5g66470.1 68418.m08382 expressed protein
Length = 427
Score = 33.5 bits (73), Expect = 0.17
Identities = 22/107 (20%), Positives = 44/107 (41%), Gaps = 1/107 (0%)
Frame = +1
Query: 487 RS*SYIPEQVRQHLARLPSIDPYTRTIIICGFPNVGKSSFINKITRADVE-VQPYAFTTK 663
R+ + + + + L P+ + + + G PNVGKS+ N++ + V TT+
Sbjct: 106 RNMALLDDYEMEELGHTPNTHHRSGYVAVVGMPNVGKSTLSNQMIGQKISIVTDKPQTTR 165
Query: 664 SLYVGHTGYKYLRWQVIDTPGILDHPLEETQCYEMPAVTAFGSSQSC 804
+G + + DTPG+++ + M V + C
Sbjct: 166 HRILGICSSPEYQMILYDTPGVIEKKMHRLDTMMMKNVRDAAINADC 212
>At1g52980.1 68414.m05995 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 576
Score = 33.5 bits (73), Expect = 0.17
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +1
Query: 514 VRQHLARLPSIDPYTRTIIICGFPNVGKSSFINKITRADV-EVQPYAFTTKS-LYVGHTG 687
V + ARL S D ++ G+PNVGKSS IN + +V +V P TK Y+ T
Sbjct: 296 VLRQFARLKS-DKQAISVGFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTK 354
Query: 688 YKYLRWQVIDTPGIL 732
+L ID PG++
Sbjct: 355 RIFL----IDCPGVV 365
>At5g39960.1 68418.m04846 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 616
Score = 32.7 bits (71), Expect = 0.29
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +1
Query: 562 TIIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTGYKYLRWQVIDTPGI 729
T+++ G PNVGKS+ N+ A V P T+ + G LR+ V+D+ GI
Sbjct: 119 TVMLMGRPNVGKSALYNR--EALVYNTPDDHVTRDIREGIAKLGDLRFNVLDSAGI 172
>At4g15810.1 68417.m02406 chloroplast outer membrane protein,
putative similar to chloroplast protein import component
Toc159 [Pisum sativum] GI:8489806, chloroplast outer
envelope protein 86 [Pisum sativum] GI:599958,
GTP-binding protein [Pisum sativum] GI:576509
Length = 898
Score = 31.9 bits (69), Expect = 0.51
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +1
Query: 553 YTRTIIICGFPNVGKSSFINKIT-RADVEVQPYAFTTKSL--YVGHTGYKYLRWQVIDTP 723
++ +++ G VGKS+ +N I V + TT S VG+ G ++ ++DTP
Sbjct: 608 FSINVLVIGKTGVGKSATVNSIFGETKSAVGAFGVTTNSANYVVGNVGG--IQISILDTP 665
Query: 724 GILDHPLEE 750
G+L EE
Sbjct: 666 GLLSSATEE 674
>At1g30580.1 68414.m03741 expressed protein
Length = 394
Score = 31.9 bits (69), Expect = 0.51
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 571 ICGFPNVGKSSFINKITRADVEVQPYAFTT 660
I G PNVGKS+ N +T+ + + + F T
Sbjct: 29 IVGLPNVGKSTLFNTLTKLSIPAENFPFCT 58
>At4g02790.1 68417.m00379 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 372
Score = 31.5 bits (68), Expect = 0.68
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +1
Query: 571 ICGFPNVGKSSFINKITRADV-EVQPYAFTTKSLYVGHTGYKYLRWQVIDTPGILDHPLE 747
I G+PNVGKSS IN++ + + P T+ + G K L ++D+PG+L ++
Sbjct: 218 IIGYPNVGKSSLINRLLKRKICAAAPRPGVTREMKWVKLG-KDL--DLLDSPGMLPMRID 274
Query: 748 E 750
+
Sbjct: 275 D 275
>At1g78010.1 68414.m09091 tRNA modification GTPase, putative similar
to tRNA modification GTPase trmE [strain PCC 7120,
Anabaena sp.] SWISS-PROT:Q8YN91
Length = 560
Score = 31.5 bits (68), Expect = 0.68
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 565 IIICGFPNVGKSSFINKITRAD-VEVQPYAFTTKSLYVGHTGYKYLRWQVIDTPGI 729
I I G PNVGKSS +N ++++ V A TT+ + + + + ++DT GI
Sbjct: 320 IAIVGRPNVGKSSLLNAWSKSERAIVTEVAGTTRDVVEANVTVRGVPITLLDTAGI 375
>At3g21700.3 68416.m02737 expressed protein
Length = 292
Score = 31.1 bits (67), Expect = 0.90
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 6/91 (6%)
Frame = +1
Query: 457 GSHGHHHETARS*SYIPEQVRQHLARLPSIDPYTRTIIICGFPNVGKSSFINKITRADVE 636
G G E R S + + H R D + I + G P +GK+SF+ K + E
Sbjct: 75 GGGGGGGEFVRRSSVVYDNDNSH--RRSDSDLVSLKISLLGDPEIGKTSFLAKYVGEEKE 132
Query: 637 VQPYAF------TTKSLYVGHTGYKYLRWQV 711
V+ T K+LY+G Y W++
Sbjct: 133 VEMRELEKGINCTDKTLYMGGARISYSIWEL 163
>At3g21700.2 68416.m02735 expressed protein
Length = 248
Score = 31.1 bits (67), Expect = 0.90
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 6/91 (6%)
Frame = +1
Query: 457 GSHGHHHETARS*SYIPEQVRQHLARLPSIDPYTRTIIICGFPNVGKSSFINKITRADVE 636
G G E R S + + H R D + I + G P +GK+SF+ K + E
Sbjct: 75 GGGGGGGEFVRRSSVVYDNDNSH--RRSDSDLVSLKISLLGDPEIGKTSFLAKYVGEEKE 132
Query: 637 VQPYAF------TTKSLYVGHTGYKYLRWQV 711
V+ T K+LY+G Y W++
Sbjct: 133 VEMRELEKGINCTDKTLYMGGARISYSIWEL 163
>At3g21700.1 68416.m02736 expressed protein
Length = 291
Score = 31.1 bits (67), Expect = 0.90
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 6/91 (6%)
Frame = +1
Query: 457 GSHGHHHETARS*SYIPEQVRQHLARLPSIDPYTRTIIICGFPNVGKSSFINKITRADVE 636
G G E R S + + H R D + I + G P +GK+SF+ K + E
Sbjct: 75 GGGGGGGEFVRRSSVVYDNDNSH--RRSDSDLVSLKISLLGDPEIGKTSFLAKYVGEEKE 132
Query: 637 VQPYAF------TTKSLYVGHTGYKYLRWQV 711
V+ T K+LY+G Y W++
Sbjct: 133 VEMRELEKGINCTDKTLYMGGARISYSIWEL 163
>At3g47450.2 68416.m05160 expressed protein
Length = 561
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 559 RTIIICGFPNVGKSSFINKITRADVEVQPYA 651
R + I G NVGKS+FIN + + E P A
Sbjct: 280 RDVYILGAANVGKSAFINALLKTMAERDPVA 310
>At3g47450.1 68416.m05159 expressed protein
Length = 561
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 559 RTIIICGFPNVGKSSFINKITRADVEVQPYA 651
R + I G NVGKS+FIN + + E P A
Sbjct: 280 RDVYILGAANVGKSAFINALLKTMAERDPVA 310
>At4g13030.2 68417.m02034 expressed protein
Length = 479
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +1
Query: 550 PYTRTIIICGFPNVGKSSFINKITR 624
P T +I++ G GKSS +NKITR
Sbjct: 102 PKTTSIMLVGPKGAGKSSLVNKITR 126
>At4g13030.1 68417.m02033 expressed protein
Length = 481
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +1
Query: 550 PYTRTIIICGFPNVGKSSFINKITR 624
P T +I++ G GKSS +NKITR
Sbjct: 104 PKTTSIMLVGPKGAGKSSLVNKITR 128
>At4g01560.1 68417.m00202 brix domain-containing protein contains
Pfam domain, PF04427: Brix domain
Length = 343
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 54 KMSLYNFKKIAVVPTAKDFIDIILSKTQRKTP 149
K Y+ KKI T KDF +I+ T R+ P
Sbjct: 159 KRGTYDLKKIVEYATKKDFTSLIVVHTNRREP 190
>At3g09660.1 68416.m01145 minichromosome maintenance family protein
/ MCM family protein similar to SP|P49717 DNA
replication licensing factor MCM4 (CDC21 homolog) {Mus
musculus}; contains Pfam profile PF00493: MCM2/3/5
family
Length = 777
Score = 28.7 bits (61), Expect = 4.8
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 10/83 (12%)
Frame = +2
Query: 257 EFPKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLI----------DNVAKDYVRLL 406
+F K+ D+ F+ +L +D+ K + +N A H + +NV K VRL
Sbjct: 83 QFKKISDIENFFINL------EDNPKGVIPCMNAAVHKVLFDQWETNEFENVMKINVRLH 136
Query: 407 KYGDSLYRCKQLKRAALGRMATI 475
Y +S K L+ A +G++ T+
Sbjct: 137 NYPESSISLKNLRAAYIGKLVTV 159
>At4g32500.1 68417.m04626 potassium channel protein, putative
similar to potassium channel [Solanum tuberosum]
gi|1514649|emb|CAA60016; similar to AKT1 [Arabidopsis
thaliana] gi|563112|gb|AAA96810; member of the 1 pore, 6
transmembrane (1P/6TM- Shaker-type) K+ channel family,
PMID:11500563
Length = 880
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 338 GLGQLNTARHLIDNVAKDYVRLLKYGDSLYRCKQLKRAALGRMAT-IMKRQGANL 499
G+G + AR I A +++K DSL ++ LG +AT I+ R+GA +
Sbjct: 808 GVGGVYPARVTISGEASSSGKVVKLPDSLEELIEIGEKKLGFVATKILSREGAEI 862
>At2g41670.1 68415.m05148 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 386
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 556 TRTIIICGFPNVGKSSFINKI 618
T +++ G PNVGKS+ IN I
Sbjct: 136 TLLVMVVGVPNVGKSALINSI 156
>At2g22870.1 68415.m02715 expressed protein
Length = 300
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = +1
Query: 565 IIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTGYKYLRWQVIDTPG 726
I I G NVGKSS IN + R K+ + H W ++D PG
Sbjct: 123 IAILGRSNVGKSSLINCLVRKKEVALTSKKPGKTQLINHF-LVNKSWYIVDLPG 175
>At2g11810.1 68415.m01269 1,2-diacylglycerol
3-beta-galactosyltransferase, putative /
monogalactosyldiacylglycerol synthase, putative / MGDG
synthase, putative identical to
monogalactosyldiacylglycerol synthase type C
[gi:9927295] from Arabidopsis thaliana, similar to MGDG
synthase type A [gi:9884651] from Glycine max
Length = 465
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 696 IFVTSMTNIQTLCGKRIWLHFHISTCYFINK 604
IFVT +T++ T C R W H +S CY +K
Sbjct: 203 IFVTVITDLNT-C-HRTWFHHGVSRCYCPSK 231
>At5g45520.1 68418.m05591 hypothetical protein
Length = 1167
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/38 (31%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = -1
Query: 352 QLSESKF-VMILVVQYVHEISIKWMDII*LWEFLIILD 242
+++E K+ V IL ++Y+HE ++W D+ L+ + +L+
Sbjct: 1106 RITEDKWDVEILRLKYLHEFKVEWRDLQTLFPKMTLLE 1143
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,942,066
Number of Sequences: 28952
Number of extensions: 389560
Number of successful extensions: 948
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1824072800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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