Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0198.Seq
(797 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g56040.1 68414.m06434 U-box domain-containing protein contain... 31 0.89
At5g26110.1 68418.m03106 expressed protein 30 2.0
At5g20730.3 68418.m02464 auxin-responsive factor (ARF7) identica... 30 2.0
At5g20730.2 68418.m02463 auxin-responsive factor (ARF7) identica... 30 2.0
At5g20730.1 68418.m02462 auxin-responsive factor (ARF7) identica... 30 2.0
At4g36520.1 68417.m05185 trichohyalin-related low similarity to ... 29 3.6
At2g22795.1 68415.m02704 expressed protein 29 3.6
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 29 4.7
At5g44310.2 68418.m05424 late embryogenesis abundant domain-cont... 28 6.2
At5g44310.1 68418.m05423 late embryogenesis abundant domain-cont... 28 6.2
At3g53350.3 68416.m05888 myosin heavy chain-related low similari... 28 6.2
At3g53350.2 68416.m05887 myosin heavy chain-related low similari... 28 6.2
At3g53350.1 68416.m05886 myosin heavy chain-related low similari... 28 6.2
At2g32240.1 68415.m03940 expressed protein contains Pfam profile... 28 8.3
>At1g56040.1 68414.m06434 U-box domain-containing protein contains
Pfam profile PF04564: U-box domain
Length = 437
Score = 31.1 bits (67), Expect = 0.89
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Frame = +2
Query: 146 TKKPELYGSTIGKIRMGSRHQNSISQS-RKSRIRDYSLNRQNEIQQLKESFILQQQKRED 322
T L+ S IGK+ +Q R SR+ + N E++ KE+ K+ED
Sbjct: 109 TDAMNLFRSIIGKLADFHFSDEKFNQLVRSSRVVELEGNYNEEVKLRKEAEDALAMKKED 168
Query: 323 LNKYKEFVHSEYQENTRL-LFAHKQQLEQEVKLRQLACSET 442
+ ++ + S +E +L L A + + E +LR +ET
Sbjct: 169 VEMMEQLLESYKEEQGKLQLQAKALEHKLEAELRHRKETET 209
>At5g26110.1 68418.m03106 expressed protein
Length = 226
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 315 ERILISIRSLCTLNIKRILASYLLTSSSWSRKLN 416
ER L+S+ S C + RIL +Y +S WS N
Sbjct: 177 ERALLSMHSSCGNVMDRILTAYRKSSKQWSATFN 210
>At5g20730.3 68418.m02464 auxin-responsive factor (ARF7) identical
to auxin response factor 7 GI:4104929 from [Arabidopsis
thaliana]
Length = 1150
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/75 (25%), Positives = 38/75 (50%)
Frame = +2
Query: 203 HQNSISQSRKSRIRDYSLNRQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQENTRLLF 382
HQ SQS++ + + L +Q ++Q + S Q Q ++ ++ Q+ +L
Sbjct: 516 HQQQQSQSQQQQQQQQLLQQQQQLQSQQHSNNNQSQSQQQQQLLQQ------QQQQQLQQ 569
Query: 383 AHKQQLEQEVKLRQL 427
H+Q L+Q+ + +QL
Sbjct: 570 QHQQPLQQQTQQQQL 584
>At5g20730.2 68418.m02463 auxin-responsive factor (ARF7) identical
to auxin response factor 7 GI:4104929 from [Arabidopsis
thaliana]
Length = 1164
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/75 (25%), Positives = 38/75 (50%)
Frame = +2
Query: 203 HQNSISQSRKSRIRDYSLNRQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQENTRLLF 382
HQ SQS++ + + L +Q ++Q + S Q Q ++ ++ Q+ +L
Sbjct: 515 HQQQQSQSQQQQQQQQLLQQQQQLQSQQHSNNNQSQSQQQQQLLQQ------QQQQQLQQ 568
Query: 383 AHKQQLEQEVKLRQL 427
H+Q L+Q+ + +QL
Sbjct: 569 QHQQPLQQQTQQQQL 583
>At5g20730.1 68418.m02462 auxin-responsive factor (ARF7) identical
to auxin response factor 7 GI:4104929 from [Arabidopsis
thaliana]
Length = 1165
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/75 (25%), Positives = 38/75 (50%)
Frame = +2
Query: 203 HQNSISQSRKSRIRDYSLNRQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQENTRLLF 382
HQ SQS++ + + L +Q ++Q + S Q Q ++ ++ Q+ +L
Sbjct: 516 HQQQQSQSQQQQQQQQLLQQQQQLQSQQHSNNNQSQSQQQQQLLQQ------QQQQQLQQ 569
Query: 383 AHKQQLEQEVKLRQL 427
H+Q L+Q+ + +QL
Sbjct: 570 QHQQPLQQQTQQQQL 584
>At4g36520.1 68417.m05185 trichohyalin-related low similarity to
SP|Q07283 Trichohyalin {Homo sapiens}
Length = 1400
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Frame = +2
Query: 251 SLNRQNEIQQLKESFILQQQKREDLNKYKEFVHS-----EYQENTRLLFAHKQQLEQEVK 415
+ ++ E ++++E+F L+Q+K + + +E + E +E L K LEQE K
Sbjct: 716 AFEKEEENRRMREAFALEQEKERRIKEAREKEENERRIKEAREKAELEQRLKATLEQEEK 775
Query: 416 LRQL 427
RQ+
Sbjct: 776 ERQI 779
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/85 (21%), Positives = 37/85 (43%)
Frame = +2
Query: 257 NRQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQENTRLLFAHKQQLEQEVKLRQLACS 436
N E ++++ SF+ + +++ED K KE S QE T + E+ +
Sbjct: 485 NEDKETEKIESSFLEETKEKEDETKEKE--ESSSQEKTEEKETETKDNEESSSQEETKDK 542
Query: 437 ETDGLDRGVIDCQXQCKDIGTRVDD 511
E + +++ Q + K+ T +
Sbjct: 543 ENEKIEKEEASSQEESKENETETKE 567
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/55 (20%), Positives = 31/55 (56%)
Frame = +2
Query: 200 RHQNSISQSRKSRIRDYSLNRQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQE 364
+ Q + + + R+R + E+++ K + + ++++RE+ Y E + ++Y+E
Sbjct: 405 KRQMFLKTTAEGRLRARQKRNEEELEKEKRNQLEEERRRENPESYLEELQAQYKE 459
>At5g44310.2 68418.m05424 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to 51 kDa seed maturation protein
[Glycine max] GI:414977; contains Pfam profile PF02987:
Late embryogenesis abundant protein
Length = 331
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/115 (18%), Positives = 50/115 (43%)
Frame = +2
Query: 173 TIGKIRMGSRHQNSISQSRKSRIRDYSLNRQNEIQQLKESFILQQQKREDLNKYKEFVHS 352
T K+ G+ ++ K + +DY+ + + + + + F ++K +D+ +
Sbjct: 220 TKDKVNEGASRAADKAEETKDKAKDYAEDSKEKAEDMAHGF---KEKAQDIGEKTMDTVK 276
Query: 353 EYQENTRLLFAHKQQLEQEVKLRQLACSETDGLDRGVIDCQXQCKDIGTRVDDYK 517
+ E + ++ E V + A D +D+G+ D + K+ + DD+K
Sbjct: 277 DVWETAKS--TAQKVTEAVVGSGEEADKARDDVDKGLEDLSKKAKENRNKDDDFK 329
>At5g44310.1 68418.m05423 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to 51 kDa seed maturation protein
[Glycine max] GI:414977; contains Pfam profile PF02987:
Late embryogenesis abundant protein
Length = 295
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/115 (18%), Positives = 50/115 (43%)
Frame = +2
Query: 173 TIGKIRMGSRHQNSISQSRKSRIRDYSLNRQNEIQQLKESFILQQQKREDLNKYKEFVHS 352
T K+ G+ ++ K + +DY+ + + + + + F ++K +D+ +
Sbjct: 184 TKDKVNEGASRAADKAEETKDKAKDYAEDSKEKAEDMAHGF---KEKAQDIGEKTMDTVK 240
Query: 353 EYQENTRLLFAHKQQLEQEVKLRQLACSETDGLDRGVIDCQXQCKDIGTRVDDYK 517
+ E + ++ E V + A D +D+G+ D + K+ + DD+K
Sbjct: 241 DVWETAKS--TAQKVTEAVVGSGEEADKARDDVDKGLEDLSKKAKENRNKDDDFK 293
>At3g53350.3 68416.m05888 myosin heavy chain-related low similarity
to filamin-interacting protein S-FILIP [Rattus
norvegicus] GI:21392397, nonmuscle heavy chain myosin
II-A [Mus musculus] GI:17978023
Length = 394
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +2
Query: 215 ISQSRKSRIRDYSLNRQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQE 364
+ Q + R+ + E+++LKE+ L +Q+ L E + YQE
Sbjct: 191 VRQLEEERVNSRDSSSSMEVEELKEAMNLSRQEITQLKSAVEAAETRYQE 240
>At3g53350.2 68416.m05887 myosin heavy chain-related low similarity
to filamin-interacting protein S-FILIP [Rattus
norvegicus] GI:21392397, nonmuscle heavy chain myosin
II-A [Mus musculus] GI:17978023
Length = 394
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +2
Query: 215 ISQSRKSRIRDYSLNRQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQE 364
+ Q + R+ + E+++LKE+ L +Q+ L E + YQE
Sbjct: 191 VRQLEEERVNSRDSSSSMEVEELKEAMNLSRQEITQLKSAVEAAETRYQE 240
>At3g53350.1 68416.m05886 myosin heavy chain-related low similarity
to filamin-interacting protein S-FILIP [Rattus
norvegicus] GI:21392397, nonmuscle heavy chain myosin
II-A [Mus musculus] GI:17978023
Length = 396
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +2
Query: 215 ISQSRKSRIRDYSLNRQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQE 364
+ Q + R+ + E+++LKE+ L +Q+ L E + YQE
Sbjct: 193 VRQLEEERVNSRDSSSSMEVEELKEAMNLSRQEITQLKSAVEAAETRYQE 242
>At2g32240.1 68415.m03940 expressed protein contains Pfam profile:
PF04508 viral A-type inclusion protein repeat
Length = 775
Score = 27.9 bits (59), Expect = 8.3
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +2
Query: 263 QNEIQQLKESFILQQQKRED-LNKYKEFVHSEYQENTRLLFAHKQQLEQEVKLRQLACSE 439
Q+ I + K++ +Q + E L K +E + ++ + T K LEQ+V+L E
Sbjct: 639 QSSIDEQKQAHSQKQSELESALKKSQEEIEAKKKAVTEFESMVKD-LEQKVQLADAKTKE 697
Query: 440 TDGLDRGV 463
T+ +D GV
Sbjct: 698 TEAMDVGV 705
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,493,530
Number of Sequences: 28952
Number of extensions: 262246
Number of successful extensions: 712
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 705
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1804564000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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