Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30189.Seq
(763 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 182 2e-46
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 182 2e-46
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 182 2e-46
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 182 2e-46
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 107 6e-24
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 91 6e-19
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 60 1e-09
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 58 5e-09
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 40 0.002
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 40 0.002
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 39 0.003
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 39 0.003
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 37 0.013
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 36 0.022
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 35 0.068
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 33 0.16
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 33 0.16
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 33 0.27
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 33 0.27
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 32 0.36
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 32 0.48
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 31 0.63
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 31 0.63
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 31 1.1
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 31 1.1
At5g35980.1 68418.m04333 protein kinase family protein contains ... 30 1.9
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 2.6
At1g62660.1 68414.m07071 beta-fructosidase (BFRUCT3) / beta-fruc... 29 4.5
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 28 5.9
At5g38320.1 68418.m04625 expressed protein ; expression support... 28 7.8
At5g04540.1 68418.m00454 expressed protein 28 7.8
At3g10550.1 68416.m01266 expressed protein 28 7.8
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 182 bits (443), Expect = 2e-46
Identities = 86/141 (60%), Positives = 103/141 (73%)
Frame = +2
Query: 257 IDIALWKFETSKYYVTIIDAPGHXDFIXXMXTGTSQADCAVLIVAAGTGEFEAGISKNGQ 436
IDIALWKFET+KYY T+IDAPGH DFI M TGTSQADCAVLI+ + TG FEAGISK+GQ
Sbjct: 73 IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQ 132
Query: 437 TREHALLAFTLGVKQLIVGVNKMDPLNHHTVSPDLRKSXRKYPHTSRRLGYNPAAVAFVP 616
TREHALLAFTLGVKQ+I NKMD + ++ +++GYNP + FVP
Sbjct: 133 TREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVP 192
Query: 617 ISGWHGDNMLEPSTKMPWFXG 679
ISG+ GDNM+E ST + W+ G
Sbjct: 193 ISGFEGDNMIERSTNLDWYKG 213
Score = 130 bits (313), Expect = 1e-30
Identities = 61/68 (89%), Positives = 62/68 (91%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 223 DKLKAERE 246
DKLKAERE
Sbjct: 61 DKLKAERE 68
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 182 bits (443), Expect = 2e-46
Identities = 86/141 (60%), Positives = 103/141 (73%)
Frame = +2
Query: 257 IDIALWKFETSKYYVTIIDAPGHXDFIXXMXTGTSQADCAVLIVAAGTGEFEAGISKNGQ 436
IDIALWKFET+KYY T+IDAPGH DFI M TGTSQADCAVLI+ + TG FEAGISK+GQ
Sbjct: 73 IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQ 132
Query: 437 TREHALLAFTLGVKQLIVGVNKMDPLNHHTVSPDLRKSXRKYPHTSRRLGYNPAAVAFVP 616
TREHALLAFTLGVKQ+I NKMD + ++ +++GYNP + FVP
Sbjct: 133 TREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVP 192
Query: 617 ISGWHGDNMLEPSTKMPWFXG 679
ISG+ GDNM+E ST + W+ G
Sbjct: 193 ISGFEGDNMIERSTNLDWYKG 213
Score = 130 bits (313), Expect = 1e-30
Identities = 61/68 (89%), Positives = 62/68 (91%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 223 DKLKAERE 246
DKLKAERE
Sbjct: 61 DKLKAERE 68
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 182 bits (443), Expect = 2e-46
Identities = 86/141 (60%), Positives = 103/141 (73%)
Frame = +2
Query: 257 IDIALWKFETSKYYVTIIDAPGHXDFIXXMXTGTSQADCAVLIVAAGTGEFEAGISKNGQ 436
IDIALWKFET+KYY T+IDAPGH DFI M TGTSQADCAVLI+ + TG FEAGISK+GQ
Sbjct: 73 IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQ 132
Query: 437 TREHALLAFTLGVKQLIVGVNKMDPLNHHTVSPDLRKSXRKYPHTSRRLGYNPAAVAFVP 616
TREHALLAFTLGVKQ+I NKMD + ++ +++GYNP + FVP
Sbjct: 133 TREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVP 192
Query: 617 ISGWHGDNMLEPSTKMPWFXG 679
ISG+ GDNM+E ST + W+ G
Sbjct: 193 ISGFEGDNMIERSTNLDWYKG 213
Score = 130 bits (313), Expect = 1e-30
Identities = 61/68 (89%), Positives = 62/68 (91%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 223 DKLKAERE 246
DKLKAERE
Sbjct: 61 DKLKAERE 68
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 182 bits (443), Expect = 2e-46
Identities = 86/141 (60%), Positives = 103/141 (73%)
Frame = +2
Query: 257 IDIALWKFETSKYYVTIIDAPGHXDFIXXMXTGTSQADCAVLIVAAGTGEFEAGISKNGQ 436
IDIALWKFET+KYY T+IDAPGH DFI M TGTSQADCAVLI+ + TG FEAGISK+GQ
Sbjct: 73 IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQ 132
Query: 437 TREHALLAFTLGVKQLIVGVNKMDPLNHHTVSPDLRKSXRKYPHTSRRLGYNPAAVAFVP 616
TREHALLAFTLGVKQ+I NKMD + ++ +++GYNP + FVP
Sbjct: 133 TREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVP 192
Query: 617 ISGWHGDNMLEPSTKMPWFXG 679
ISG+ GDNM+E ST + W+ G
Sbjct: 193 ISGFEGDNMIERSTNLDWYKG 213
Score = 130 bits (313), Expect = 1e-30
Identities = 61/68 (89%), Positives = 62/68 (91%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 223 DKLKAERE 246
DKLKAERE
Sbjct: 61 DKLKAERE 68
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 107 bits (258), Expect = 6e-24
Identities = 61/152 (40%), Positives = 84/152 (55%), Gaps = 3/152 (1%)
Frame = +2
Query: 257 IDIALWKFETSKYYVTIIDAPGHXDFIXXMXTGTSQADCAVLIVAAGTGEFEAGISKNGQ 436
+++ FET TI+DAPGH ++ M +G SQAD VL+++A GEFE G + GQ
Sbjct: 167 VEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQ 226
Query: 437 TREHALLAFTLGVKQLIVGVNKMDPLNHHTVSPDLRKSXRKYPHTSRRLGYNPAA-VAFV 613
TREH LA TLGV +LIV VNKMD + + +K + GYN V F+
Sbjct: 227 TREHVQLAKTLGVSKLIVVVNKMDDPTVNWSKERYDEIEQKMVPFLKASGYNTKKDVVFL 286
Query: 614 PISGWHGDNMLEPSTK--MPWFXGMASWSVXE 703
PISG G NM + + PW+ G + + V +
Sbjct: 287 PISGLMGKNMDQRMGQEICPWWSGPSFFEVLD 318
Score = 68.1 bits (159), Expect = 6e-12
Identities = 28/64 (43%), Positives = 46/64 (71%)
Frame = +1
Query: 52 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 231
+K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTN 157
Query: 232 KAER 243
+ ER
Sbjct: 158 EEER 161
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 91.5 bits (217), Expect = 6e-19
Identities = 50/143 (34%), Positives = 80/143 (55%), Gaps = 4/143 (2%)
Frame = +2
Query: 263 IALWKFETSKYYVTIIDAPGHXDFIXXMXTGTSQADCAVLIVAAGTGEFEAGISK-NGQT 439
+A+ F + +++V ++D+PGH DF+ M G +QAD A+L++ A G FEAG GQT
Sbjct: 307 VAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAGFDNLKGQT 366
Query: 440 REHALLAFTLGVKQLIVGVNKMDPLNHHTVSPDLRKSXRKYPHTSRRLGYNPAAVAFVPI 619
REHA + GV+Q+IV +NKMD + + DL K S R + +++ ++P+
Sbjct: 367 REHARVLRGFGVEQVIVAINKMDIVGYSKERFDLIKQHVGSFLQSCR--FKDSSLTWIPL 424
Query: 620 SGWHGDNML-EPSTK--MPWFXG 679
S N++ PS W+ G
Sbjct: 425 SAMENQNLVAAPSDNRLSSWYQG 447
Score = 77.4 bits (182), Expect = 1e-14
Identities = 32/63 (50%), Positives = 46/63 (73%)
Frame = +1
Query: 58 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 237
+ +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAE 297
Query: 238 ERE 246
ERE
Sbjct: 298 ERE 300
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 60.5 bits (140), Expect = 1e-09
Identities = 31/87 (35%), Positives = 49/87 (56%)
Frame = +2
Query: 257 IDIALWKFETSKYYVTIIDAPGHXDFIXXMXTGTSQADCAVLIVAAGTGEFEAGISKNGQ 436
I+ A ++ET + +D PGH D++ M TG +Q D A+L+V+ G Q
Sbjct: 130 INTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP-------Q 182
Query: 437 TREHALLAFTLGVKQLIVGVNKMDPLN 517
T+EH LLA +GV ++V +NK D ++
Sbjct: 183 TKEHILLAKQVGVPDMVVFLNKEDQVD 209
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 40 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEK 174
K ++K H+NI IGHVD GK+T T L I +K+++
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE 116
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 58.4 bits (135), Expect = 5e-09
Identities = 29/78 (37%), Positives = 45/78 (57%)
Frame = +2
Query: 275 KFETSKYYVTIIDAPGHXDFIXXMXTGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 454
++ET+K + +D PGH D++ M TG +Q D +L+V+ G QT+EH L
Sbjct: 124 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP-------QTKEHIL 176
Query: 455 LAFTLGVKQLIVGVNKMD 508
LA +GV L+ +NK+D
Sbjct: 177 LARQVGVPSLVCFLNKVD 194
Score = 32.7 bits (71), Expect = 0.27
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 49 KEKTHINIVVIGHVDSGKSTTT 114
+ K H+N+ IGHVD GK+T T
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLT 84
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +2
Query: 236 LSVSRYPIDIALWKFETSKYYVTIIDAPGHXDFIXXMXTGTSQADCAVLIVAAGTG 403
+S+ P+ + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 190 ISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +2
Query: 236 LSVSRYPIDIALWKFETSKYYVTIIDAPGHXDFIXXMXTGTSQADCAVLIVAAGTG 403
+S+ P+ + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 190 ISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/78 (29%), Positives = 38/78 (48%)
Frame = +2
Query: 284 TSKYYVTIIDAPGHXDFIXXMXTGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 463
T + +V+ +D PGH + M G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 464 TLGVKQLIVGVNKMDPLN 517
+ +K +I+ NK+D +N
Sbjct: 178 MMRLKHIIILQNKIDLIN 195
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/78 (29%), Positives = 38/78 (48%)
Frame = +2
Query: 284 TSKYYVTIIDAPGHXDFIXXMXTGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 463
T + +V+ +D PGH + M G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 464 TLGVKQLIVGVNKMDPLN 517
+ +K +I+ NK+D +N
Sbjct: 178 MMRLKHIIILQNKIDLIN 195
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 37.1 bits (82), Expect = 0.013
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Frame = +2
Query: 278 FETSKY----YVTIIDAPGHXDFIXXMXTGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 445
FE SK +V+ +D PGH + M G + D A+L++AA QT E
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSE 165
Query: 446 HALLAFTLGVKQLIVGVNKMDPLNHHTVSPDLRKSXRKY 562
H + +K +I+ NK+D L V+ + ++ +K+
Sbjct: 166 HLAAVEIMQLKHIIILQNKID-LIQENVAINQHEAIQKF 203
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 36.3 bits (80), Expect = 0.022
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +2
Query: 296 YVTIIDAPGHXDFIXXMXTGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 475
+V+ +D PGH + M G + D A+LI+AA QT EH + +
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHL 173
Query: 476 KQLIVGVNKMD 508
K +I+ NK+D
Sbjct: 174 KDIIIIQNKID 184
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 34.7 bits (76), Expect = 0.068
Identities = 24/76 (31%), Positives = 35/76 (46%)
Frame = +2
Query: 281 ETSKYYVTIIDAPGHXDFIXXMXTGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 460
E S Y + +ID PGH DF + S A+L+V A G QT + LA
Sbjct: 131 EASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG-------VQAQTVANFYLA 183
Query: 461 FTLGVKQLIVGVNKMD 508
F + ++ +NK+D
Sbjct: 184 FEANL-TIVPVINKID 198
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +1
Query: 31 D*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK 150
D K EK N +I H+D GKST L+ G I K
Sbjct: 57 DLTKFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKK 95
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +2
Query: 293 YYVTIIDAPGHXDFIXXMXTGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 448
Y V IID PGH DF + D A+L++ + G I+ + Q R +
Sbjct: 133 YKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRY 184
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGI 144
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +2
Query: 293 YYVTIIDAPGHXDFIXXMXTGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 448
Y V IID PGH DF + D A+L++ + G I+ + Q R +
Sbjct: 133 YKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRY 184
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGI 144
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 32.7 bits (71), Expect = 0.27
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGG 141
NI ++ HVD GK+T HLI GG
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG 35
Score = 32.3 bits (70), Expect = 0.36
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 293 YYVTIIDAPGHXDFIXXMXTGTSQADCAVLIVAAGTG 403
Y + +ID+PGH DF + T +D A+++V A G
Sbjct: 74 YSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 32.7 bits (71), Expect = 0.27
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 55 KTHINIVVIGHVDSGKSTTTGHLIYKCG 138
K + NI ++ H+D+GK+TTT ++Y G
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG 121
Score = 27.9 bits (59), Expect = 7.8
Identities = 24/75 (32%), Positives = 33/75 (44%)
Frame = +2
Query: 290 KYYVTIIDAPGHXDFIXXMXTGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTL 469
K+ + IID PGH DF + D A+ + + AG+ +T A
Sbjct: 160 KHRINIIDTPGHVDFTLEVERALRVLDGAICLF-----DSVAGVEPQSETVWRQ--ADKY 212
Query: 470 GVKQLIVGVNKMDPL 514
GV + I VNKMD L
Sbjct: 213 GVPR-ICFVNKMDRL 226
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 32.3 bits (70), Expect = 0.36
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 299 VTIIDAPGHXDFIXXMXTGTSQADCAVLIVAAGTG 403
+T +D PGH F G + D VL+VAA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 31.9 bits (69), Expect = 0.48
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 278 FETSKYYVTIIDAPGHXDFIXXMXTGTSQADCAVLIVAAGTG 403
+E + + + +ID PGH DF + + + A+L+V A G
Sbjct: 147 YEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 188
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 165
N +I H+D GKST L+ G + R +++
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDMKE 120
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 31.5 bits (68), Expect = 0.63
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = +2
Query: 305 IIDAPGHXDFIXXMXTGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 484
+ID PGH F G+S D A+L+V + + G+ QT E +L + +
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV-----DIKHGLEP--QTIE-SLNLLRMRNTEF 756
Query: 485 IVGVNKMDPL 514
I+ +NK+D L
Sbjct: 757 IIALNKVDRL 766
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 31.5 bits (68), Expect = 0.63
Identities = 23/72 (31%), Positives = 34/72 (47%)
Frame = +2
Query: 299 VTIIDAPGHXDFIXXMXTGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 478
+ +ID PGH F G++ D A+L+V + G+ QT E L VK
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV-----DIMRGLEP--QTIESLNLLRRRNVK 610
Query: 479 QLIVGVNKMDPL 514
I+ +NK+D L
Sbjct: 611 -FIIALNKVDRL 621
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +2
Query: 305 IIDAPGHXDFIXXMXTGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 484
+ID PGH F G+S D A+L+V + G+ QT E +L + +
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV-----DITHGLQP--QTIE-SLNLLRMRNTEF 164
Query: 485 IVGVNKMDPL 514
I+ +NK+D L
Sbjct: 165 IIALNKVDRL 174
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = +2
Query: 305 IIDAPGHXDFIXXMXTGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 484
+ID PGH F G+S D A+L+V + G+ QT E +L + +
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV-----DIMHGLEP--QTIE-SLNLLRMRNTEF 823
Query: 485 IVGVNKMDPL 514
IV +NK+D L
Sbjct: 824 IVALNKVDRL 833
>At5g35980.1 68418.m04333 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 956
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 530 SPDLRKSXRKYPHTS--RRLGYNPAAVAFVPISGWHGDNMLEPSTKMPWFXG 679
SPD R+ +YPH + LG +P+A F P+ + P+T + G
Sbjct: 587 SPDARRRVMQYPHGNGPNGLGTSPSAGNFAPLPLGTSPSQFTPNTNNQFLAG 638
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 287 SKYYVTIIDAPGHXDFIXXMXTGTSQADCAVLIV 388
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCG 138
N+ VI HVD GKST T L+ G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44
>At1g62660.1 68414.m07071 beta-fructosidase (BFRUCT3) /
beta-fructofuranosidase / invertase, vacuolar identical
to beta-fructosidase GB:CAA67560 GI:1429209 [Arabidopsis
thaliana]; supported by full-length cDNA GI:14517549;
identical to cDNA Beta-fructosidase GI:3115854
Length = 648
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = -1
Query: 538 IWAHCMVVQWIHFVYSYDELFDTEGESEQGMLTG-LTVLRDTSFEFTGTGSYDE 380
+W H + IH++Y + + G+ TG T L D S TGS DE
Sbjct: 148 VWGHAVSKDLIHWLYLPIAMVPDQWYDANGVWTGSATFLDDGSIVMLYTGSTDE 201
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +2
Query: 308 IDAPGHXDFIXXMXTGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 487
+D PGH F G D A+++VAA G QT E A+ ++
Sbjct: 557 LDTPGHEAFGAMRARGARVTDIAIIVVAADDG-------IRPQTNE-AIAHAKAAAVPIV 608
Query: 488 VGVNKMD 508
+ +NK+D
Sbjct: 609 IAINKID 615
>At5g38320.1 68418.m04625 expressed protein ; expression supported
by MPSS
Length = 212
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +2
Query: 617 ISGWHGDNMLEPSTKMPWFXGMASWSVXEGXADGKIAPLKSRMHP 751
IS ++ LE S G +SWS E DGKI P++ + P
Sbjct: 36 ISNFYWGFPLEFSIPRGAISGESSWSAEEFFNDGKILPIEMKKIP 80
>At5g04540.1 68418.m00454 expressed protein
Length = 833
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Frame = +3
Query: 549 QXGSILIHQED-W-ATTQLLSLSCPFLD 626
+ S+L+H D W TTQL+SL+C LD
Sbjct: 432 ESASVLVHCSDGWDRTTQLVSLACLLLD 459
>At3g10550.1 68416.m01266 expressed protein
Length = 634
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Frame = +3
Query: 549 QXGSILIHQED-W-ATTQLLSLSCPFLD 626
+ S+L+H D W TTQL+SL+C LD
Sbjct: 229 ESASVLVHCSDGWDRTTQLVSLACLLLD 256
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,650,834
Number of Sequences: 28952
Number of extensions: 346584
Number of successful extensions: 1022
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1004
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1702303248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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