Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30168.Seq
         (847 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g05160.1 68414.m00519 ent-kaurenoic acid hydroxylase (KAO1) /...    31   1.3  
At5g56450.1 68418.m07046 mitochondrial substrate carrier family ...    28   6.8  
At4g21326.1 68417.m03081 subtilase family protein contains simil...    28   6.8  

>At1g05160.1 68414.m00519 ent-kaurenoic acid hydroxylase (KAO1) /
           cytochrome P450 88A3, putative (CYP88A3) identical to
           Cytochrome P450 88A3 (SP:O23051) [Arabidopsis thaliana];
           nearly identical to ent-kaurenoic acid hydroxylase
           (KAO1) GI:13021852 from [Arabidopsis thaliana]
          Length = 490

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
 Frame = -2

Query: 798 FGXNFSXXKLN----HDSLGITNHFXLPGDMDWPATQRFFQWIKTINVN 664
           FG N+   K+N      SLG   H+  PGD+ WP       +++    +
Sbjct: 20  FGLNWLVRKVNVWLYESSLGENRHYLPPGDLGWPFIGNMLSFLRAFKTS 68


>At5g56450.1 68418.m07046 mitochondrial substrate carrier family
           protein contains Pfam profile: PF00153 mitochondrial
           carrier protein
          Length = 330

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +1

Query: 4   RGTGGAFVLVLYDEIKKVL 60
           R TG A +LV YDE+K+ L
Sbjct: 307 RSTGSAAILVFYDEVKRFL 325


>At4g21326.1 68417.m03081 subtilase family protein contains
           similarity to subtilase; SP1 GI:9957714 from [Oryza
           sativa]
          Length = 690

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 686 HWKNRCVAGQSISPGR 733
           HWK +CVAG+   P +
Sbjct: 112 HWKGKCVAGEDFDPAK 127


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,379,074
Number of Sequences: 28952
Number of extensions: 313729
Number of successful extensions: 492
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 492
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1960634400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)