Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0062.Seq
(512 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 122 2e-28
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 120 4e-28
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 109 1e-24
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 89 2e-18
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 87 5e-18
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 87 5e-18
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 87 7e-18
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 87 9e-18
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 87 9e-18
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 87 9e-18
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 85 3e-17
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 85 3e-17
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 85 3e-17
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 85 3e-17
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 85 3e-17
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 85 3e-17
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 83 1e-16
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 83 1e-16
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 83 1e-16
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 81 3e-16
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 81 4e-16
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 81 4e-16
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 79 1e-15
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 75 3e-14
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 75 3e-14
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 73 9e-14
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 73 9e-14
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 73 9e-14
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 73 1e-13
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 72 2e-13
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 71 6e-13
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 69 2e-12
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 69 2e-12
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 68 3e-12
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 68 4e-12
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 66 1e-11
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 66 1e-11
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 65 2e-11
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 64 7e-11
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 63 9e-11
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 62 2e-10
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 62 3e-10
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 62 3e-10
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 51 4e-07
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 50 1e-06
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 49 2e-06
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 49 2e-06
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 48 3e-06
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 45 3e-05
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 42 3e-04
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 40 0.001
At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family pro... 38 0.004
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 38 0.004
At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family pro... 38 0.005
At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family pro... 33 0.085
At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family pro... 33 0.11
At1g75230.2 68414.m08739 HhH-GPD base excision DNA repair family... 33 0.15
At1g75230.1 68414.m08740 HhH-GPD base excision DNA repair family... 33 0.15
At1g02890.1 68414.m00256 AAA-type ATPase family protein contains... 31 0.34
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 30 0.80
At4g16140.1 68417.m02445 proline-rich family protein contains pr... 29 1.8
At2g38950.1 68415.m04786 transcription factor jumonji (jmj) fami... 28 4.2
At1g55000.1 68414.m06282 peptidoglycan-binding LysM domain-conta... 28 4.2
At3g14950.1 68416.m01891 tetratricopeptide repeat (TPR)-containi... 27 5.6
At1g55430.1 68414.m06340 DC1 domain-containing protein contains ... 27 5.6
At5g61790.1 68418.m07754 calnexin 1 (CNX1) identical to calnexin... 27 7.4
At5g61620.1 68418.m07732 myb family transcription factor contain... 27 9.8
At4g39850.1 68417.m05646 peroxisomal ABC transporter (PXA1) iden... 27 9.8
At3g16020.1 68416.m02026 hypothetical protein 27 9.8
At2g02680.1 68415.m00207 DC1 domain-containing protein contains ... 27 9.8
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 122 bits (293), Expect = 2e-28
Identities = 48/79 (60%), Positives = 61/79 (77%)
Frame = +1
Query: 22 EEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKV 201
+ PV+GF L+ E N+FEW V I GPPDTLY+GG+F A M FP +YP SPP++RF + +
Sbjct: 18 KHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDI 77
Query: 202 WHPNVYENGDLCISILHPP 258
WHPNVY +G +CISILHPP
Sbjct: 78 WHPNVYPDGRVCISILHPP 96
Score = 65.3 bits (152), Expect = 2e-11
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Frame = +3
Query: 252 PPVDDPQSGELPCERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYRRWRDSKGK- 428
PP DDP EL ERW P +V +++LS+IS+L+ PN SPANV+A+ + WR+ + +
Sbjct: 95 PPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAA---KEWREKRDEF 151
Query: 429 DKEYENIIRKQAQV 470
K+ +RK ++
Sbjct: 152 KKKVSRCVRKSQEM 165
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 120 bits (290), Expect = 4e-28
Identities = 46/79 (58%), Positives = 63/79 (79%)
Frame = +1
Query: 22 EEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKV 201
++PV+GF L+ E N+F+W V+I GPPDTLY+GG+F A M FP +YP SPP++ F +++
Sbjct: 19 KKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEM 78
Query: 202 WHPNVYENGDLCISILHPP 258
WHPNVY +G +CISILHPP
Sbjct: 79 WHPNVYSDGKVCISILHPP 97
Score = 65.7 bits (153), Expect = 2e-11
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Frame = +3
Query: 252 PPVDDPQSGELPCERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYRRWRDSKGK- 428
PP DDP EL ERW P +V +++LS+IS+L+ PN SPANV+A+ + WRD++ +
Sbjct: 96 PPGDDPHGYELASERWTPVHTVESIVLSIISMLSGPNDESPANVEAA---KEWRDNRAEF 152
Query: 429 DKEYENIIRKQAQV 470
K+ +R+ ++
Sbjct: 153 RKKVSRCVRRSQEM 166
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 109 bits (262), Expect = 1e-24
Identities = 42/64 (65%), Positives = 52/64 (81%)
Frame = +1
Query: 67 NLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISI 246
N+FEW V I GPPDTLY+GG+F A M FP +YP SPP++RF + +WHPNVY +G +CISI
Sbjct: 65 NIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISI 124
Query: 247 LHPP 258
LHPP
Sbjct: 125 LHPP 128
Score = 66.9 bits (156), Expect = 7e-12
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Frame = +3
Query: 252 PPVDDPQSGELPCERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYRRWRDSKGK- 428
PP DDP EL ERW P +V +++LS+IS+L+ PN SPANV+A+ + WRD + +
Sbjct: 127 PPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAA---KEWRDKRDEF 183
Query: 429 DKEYENIIRKQAQV 470
K+ +RK ++
Sbjct: 184 KKKVSRCVRKSQEM 197
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 88.6 bits (210), Expect = 2e-18
Identities = 31/66 (46%), Positives = 44/66 (66%)
Frame = +1
Query: 64 DNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCIS 243
+++F W+ I GPP++ Y GG F + FPPDYP+ PP + F TKV+HPN+ NG +C+
Sbjct: 28 EDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLD 87
Query: 244 ILHPPW 261
IL W
Sbjct: 88 ILKEQW 93
Score = 36.3 bits (80), Expect = 0.012
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 291 ERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYR 404
E+W+P ++ VLLS+ SLL +PN P + + MY+
Sbjct: 91 EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK 128
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 87.4 bits (207), Expect = 5e-18
Identities = 31/66 (46%), Positives = 44/66 (66%)
Frame = +1
Query: 64 DNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCIS 243
D++F+W+ I GP D+ + GG F + FPPDYP+ PP + F TKV+HPN+ NG +C+
Sbjct: 28 DDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLD 87
Query: 244 ILHPPW 261
IL W
Sbjct: 88 ILKEQW 93
Score = 35.1 bits (77), Expect = 0.028
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 291 ERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYR 404
E+W+P +V VLLS+ SLL +PN P + + +Y+
Sbjct: 91 EQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHIYK 128
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 87.4 bits (207), Expect = 5e-18
Identities = 31/66 (46%), Positives = 44/66 (66%)
Frame = +1
Query: 64 DNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCIS 243
D++F+W+ I GP D+ + GG F + FPPDYP+ PP + F TKV+HPN+ NG +C+
Sbjct: 28 DDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLD 87
Query: 244 ILHPPW 261
IL W
Sbjct: 88 ILKEQW 93
Score = 35.1 bits (77), Expect = 0.028
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 291 ERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYR 404
E+W+P +V VLLS+ SLL +PN P + + +Y+
Sbjct: 91 EQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHIYK 128
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 87.0 bits (206), Expect = 7e-18
Identities = 32/66 (48%), Positives = 43/66 (65%)
Frame = +1
Query: 64 DNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCIS 243
+++F W+ I GP D+ Y GG F + FPPDYP+ PP + F TKV+HPNV NG +C+
Sbjct: 28 EDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLD 87
Query: 244 ILHPPW 261
IL W
Sbjct: 88 ILKEQW 93
Score = 36.3 bits (80), Expect = 0.012
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 291 ERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYR 404
E+W+P ++ VLLS+ SLL +PN P + + MY+
Sbjct: 91 EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK 128
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 86.6 bits (205), Expect = 9e-18
Identities = 31/66 (46%), Positives = 43/66 (65%)
Frame = +1
Query: 64 DNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCIS 243
+++F W+ I GP D+ Y GG F + FPPDYP+ PP + F TKV+HPN+ NG +C+
Sbjct: 58 EDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLD 117
Query: 244 ILHPPW 261
IL W
Sbjct: 118 ILKEQW 123
Score = 36.3 bits (80), Expect = 0.012
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 291 ERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYR 404
E+W+P ++ VLLS+ SLL +PN P + + MY+
Sbjct: 121 EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK 158
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 86.6 bits (205), Expect = 9e-18
Identities = 31/66 (46%), Positives = 43/66 (65%)
Frame = +1
Query: 64 DNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCIS 243
+++F W+ I GP D+ Y GG F + FPPDYP+ PP + F TKV+HPN+ NG +C+
Sbjct: 28 EDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLD 87
Query: 244 ILHPPW 261
IL W
Sbjct: 88 ILKEQW 93
Score = 36.3 bits (80), Expect = 0.012
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 291 ERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYR 404
E+W+P ++ VLLS+ SLL +PN P + + MY+
Sbjct: 91 EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK 128
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 86.6 bits (205), Expect = 9e-18
Identities = 33/68 (48%), Positives = 46/68 (67%)
Frame = +1
Query: 58 GEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLC 237
GED +F W+ I GP ++ Y GG F ++ FPPDYP+ PP + F TKV+HPN+ NG++C
Sbjct: 27 GED-MFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNINSNGNIC 85
Query: 238 ISILHPPW 261
+ IL W
Sbjct: 86 LDILKDQW 93
Score = 33.5 bits (73), Expect = 0.085
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +3
Query: 291 ERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYR 404
++W+P ++ VLLS+ SLL +PN P + + +Y+
Sbjct: 91 DQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHIYK 128
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 85.0 bits (201), Expect = 3e-17
Identities = 30/66 (45%), Positives = 43/66 (65%)
Frame = +1
Query: 64 DNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCIS 243
+++F W+ I GP ++ Y GG F + FPPDYP+ PP + F TKV+HPN+ NG +C+
Sbjct: 29 EDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLD 88
Query: 244 ILHPPW 261
IL W
Sbjct: 89 ILKEQW 94
Score = 36.3 bits (80), Expect = 0.012
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 291 ERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYR 404
E+W+P ++ VLLS+ SLL +PN P + + MY+
Sbjct: 92 EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK 129
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 85.0 bits (201), Expect = 3e-17
Identities = 30/66 (45%), Positives = 43/66 (65%)
Frame = +1
Query: 64 DNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCIS 243
+++F W+ I GP ++ Y GG F + FPPDYP+ PP + F TKV+HPN+ NG +C+
Sbjct: 28 EDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLD 87
Query: 244 ILHPPW 261
IL W
Sbjct: 88 ILKEQW 93
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 85.0 bits (201), Expect = 3e-17
Identities = 30/66 (45%), Positives = 43/66 (65%)
Frame = +1
Query: 64 DNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCIS 243
+++F W+ I GP ++ Y GG F + FPPDYP+ PP + F TKV+HPN+ NG +C+
Sbjct: 28 EDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLD 87
Query: 244 ILHPPW 261
IL W
Sbjct: 88 ILKEQW 93
Score = 36.3 bits (80), Expect = 0.012
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 291 ERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYR 404
E+W+P ++ VLLS+ SLL +PN P + + MY+
Sbjct: 91 EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK 128
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 85.0 bits (201), Expect = 3e-17
Identities = 30/66 (45%), Positives = 43/66 (65%)
Frame = +1
Query: 64 DNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCIS 243
+++F W+ I GP ++ Y GG F + FPPDYP+ PP + F TKV+HPN+ NG +C+
Sbjct: 28 EDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLD 87
Query: 244 ILHPPW 261
IL W
Sbjct: 88 ILKEQW 93
Score = 36.3 bits (80), Expect = 0.012
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 291 ERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYR 404
E+W+P ++ VLLS+ SLL +PN P + + MY+
Sbjct: 91 EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK 128
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 84.6 bits (200), Expect = 3e-17
Identities = 30/66 (45%), Positives = 43/66 (65%)
Frame = +1
Query: 64 DNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCIS 243
+++F W+ I GP ++ Y GG F + FPPDYP+ PP + F TKV+HPN+ NG +C+
Sbjct: 28 EDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLD 87
Query: 244 ILHPPW 261
IL W
Sbjct: 88 ILKEQW 93
Score = 36.3 bits (80), Expect = 0.012
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 291 ERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYR 404
E+W+P ++ VLLS+ SLL +PN P + + MY+
Sbjct: 91 EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK 128
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 84.6 bits (200), Expect = 3e-17
Identities = 30/66 (45%), Positives = 43/66 (65%)
Frame = +1
Query: 64 DNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCIS 243
+++F W+ I GP ++ Y GG F + FPPDYP+ PP + F TKV+HPN+ NG +C+
Sbjct: 28 EDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLD 87
Query: 244 ILHPPW 261
IL W
Sbjct: 88 ILKEQW 93
Score = 36.3 bits (80), Expect = 0.012
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 291 ERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYR 404
E+W+P ++ VLLS+ SLL +PN P + + MY+
Sbjct: 91 EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK 128
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 83.0 bits (196), Expect = 1e-16
Identities = 29/67 (43%), Positives = 46/67 (68%)
Frame = +1
Query: 61 EDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCI 240
++N+ W IFGP DT + GG FK ++F DYP PP++RF+++++HPN+Y +G +C+
Sbjct: 30 DNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICL 89
Query: 241 SILHPPW 261
IL W
Sbjct: 90 DILQNQW 96
Score = 37.1 bits (82), Expect = 0.007
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +3
Query: 294 RWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMY 401
+W+P V +L S+ SLL +PN SPAN +A+ M+
Sbjct: 95 QWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMF 130
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 83.0 bits (196), Expect = 1e-16
Identities = 29/67 (43%), Positives = 46/67 (68%)
Frame = +1
Query: 61 EDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCI 240
++N+ W IFGP DT + GG FK ++F DYP PP++RF+++++HPN+Y +G +C+
Sbjct: 30 DNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICL 89
Query: 241 SILHPPW 261
IL W
Sbjct: 90 DILQNQW 96
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 294 RWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMY 401
+W+P V +L S+ SLL +PN SPAN +A+ MY
Sbjct: 95 QWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMY 130
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 83.0 bits (196), Expect = 1e-16
Identities = 29/67 (43%), Positives = 46/67 (68%)
Frame = +1
Query: 61 EDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCI 240
++N+ W IFGP DT + GG FK ++F DYP PP++RF+++++HPN+Y +G +C+
Sbjct: 30 DNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICL 89
Query: 241 SILHPPW 261
IL W
Sbjct: 90 DILQNQW 96
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 294 RWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMY 401
+W+P V +L S+ SLL +PN SPAN +A+ MY
Sbjct: 95 QWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMY 130
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 81.4 bits (192), Expect = 3e-16
Identities = 29/67 (43%), Positives = 44/67 (65%)
Frame = +1
Query: 61 EDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCI 240
++N+ W IFGP DT + GG FK + F DYP PP +RF+++++HPN+Y +G +C+
Sbjct: 30 DNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICL 89
Query: 241 SILHPPW 261
IL W
Sbjct: 90 DILQNQW 96
Score = 37.1 bits (82), Expect = 0.007
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +3
Query: 294 RWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMY 401
+W+P V VL S+ SLL +PN SPAN +A+ ++
Sbjct: 95 QWSPIYDVAAVLTSIQSLLCDPNPDSPANAEAARLF 130
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 81.0 bits (191), Expect = 4e-16
Identities = 29/69 (42%), Positives = 42/69 (60%)
Frame = +1
Query: 55 LGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDL 234
+ E+++F W+ I GP D+ Y GG F + F DYP+ PP + F TKV+HPN+ G +
Sbjct: 26 VAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPFKPPKVNFKTKVYHPNIDSKGSI 85
Query: 235 CISILHPPW 261
C+ IL W
Sbjct: 86 CLDILKEQW 94
Score = 34.3 bits (75), Expect = 0.049
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 291 ERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYR 404
E+W+P + VLLS+ SLL +PN P + + +Y+
Sbjct: 92 EQWSPAPTTSKVLLSICSLLTDPNPNDPLVPEIAHLYK 129
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 81.0 bits (191), Expect = 4e-16
Identities = 29/66 (43%), Positives = 42/66 (63%)
Frame = +1
Query: 64 DNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCIS 243
+N++EW I GP T Y+GG F +KFP DYP+ PP F T ++HPN+ + G +C++
Sbjct: 34 NNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMN 93
Query: 244 ILHPPW 261
IL W
Sbjct: 94 ILKDKW 99
Score = 31.1 bits (67), Expect = 0.46
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 291 ERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYRRWR 413
++W P V VLLS++ LL +PN P + +++ R
Sbjct: 97 DKWTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKNNR 137
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 79.4 bits (187), Expect = 1e-15
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Frame = +1
Query: 19 REEPVEGFRVKLLGED-NLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLT 195
+ E V ++L+ +D N+F+W I GP +T Y+GG F+ P YP PP +RFLT
Sbjct: 16 QREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLT 75
Query: 196 KVWHPNV-YENGDLCISILHPPW 261
K++HPNV ++ G++C+ IL W
Sbjct: 76 KIFHPNVHFKTGEICLDILKNAW 98
Score = 29.5 bits (63), Expect = 1.4
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +3
Query: 297 WNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYR 404
W+P ++++V ++I+L+ P SP N D+ + R
Sbjct: 98 WSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLR 133
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 74.9 bits (176), Expect = 3e-14
Identities = 32/79 (40%), Positives = 46/79 (58%)
Frame = +1
Query: 25 EPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVW 204
EP G EDN+ + V I GP + Y+GG FK + P +YP + P +RFLTK++
Sbjct: 20 EPAPGISASP-SEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIY 78
Query: 205 HPNVYENGDLCISILHPPW 261
HPN+ + G +C+ IL W
Sbjct: 79 HPNIDKLGRICLDILKDKW 97
Score = 35.1 bits (77), Expect = 0.028
Identities = 14/46 (30%), Positives = 29/46 (63%)
Frame = +3
Query: 291 ERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYRRWRDSKGK 428
++W+P +RTVLLS+ +LL+ PN P + + + + W+ ++ +
Sbjct: 95 DKWSPALQIRTVLLSIQALLSAPNPDDPLSENIA---KHWKSNEAE 137
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 74.9 bits (176), Expect = 3e-14
Identities = 32/79 (40%), Positives = 46/79 (58%)
Frame = +1
Query: 25 EPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVW 204
EP G EDN+ + V I GP + Y+GG FK + P +YP + P +RFLTK++
Sbjct: 20 EPAPGISASP-SEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIY 78
Query: 205 HPNVYENGDLCISILHPPW 261
HPN+ + G +C+ IL W
Sbjct: 79 HPNIDKLGRICLDILKDKW 97
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 73.3 bits (172), Expect = 9e-14
Identities = 30/66 (45%), Positives = 40/66 (60%)
Frame = +1
Query: 64 DNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCIS 243
DNL+ W I GP T Y+GG F + FP DYP+ PP + F T+++H NV GDL ++
Sbjct: 63 DNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVN 122
Query: 244 ILHPPW 261
IL W
Sbjct: 123 ILRDSW 128
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 73.3 bits (172), Expect = 9e-14
Identities = 28/66 (42%), Positives = 39/66 (59%)
Frame = +1
Query: 64 DNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCIS 243
+N+F WE + GP Y+ G F + PP YPY PP I F TK++HPN+ E G++ +
Sbjct: 57 ENIFRWEATVNGPVGCPYEKGVFTVSVHIPPKYPYEPPKITFKTKIFHPNISEIGEIFVD 116
Query: 244 ILHPPW 261
IL W
Sbjct: 117 ILGSRW 122
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 73.3 bits (172), Expect = 9e-14
Identities = 31/79 (39%), Positives = 46/79 (58%)
Frame = +1
Query: 25 EPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVW 204
EP G E+N+ + V I GP + Y+GG FK + P +YP + P +RFLTK++
Sbjct: 20 EPAPGISASP-SEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIY 78
Query: 205 HPNVYENGDLCISILHPPW 261
HPN+ + G +C+ IL W
Sbjct: 79 HPNIDKLGRICLDILKDKW 97
Score = 35.5 bits (78), Expect = 0.021
Identities = 15/49 (30%), Positives = 30/49 (61%)
Frame = +3
Query: 291 ERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYRRWRDSKGKDKE 437
++W+P +RTVLLS+ +LL+ PN P + + + + W+ ++ + E
Sbjct: 95 DKWSPALQIRTVLLSIQALLSAPNPDDPLSENIA---KHWKSNEAEAVE 140
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 72.9 bits (171), Expect = 1e-13
Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Frame = +1
Query: 64 DNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYE-NGDLCI 240
D + E+ V GP D+LYQGG +K ++ P YPY PS+ F+TK++HPNV E +G +C+
Sbjct: 27 DGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCL 86
Query: 241 SILHPPW 261
+++ W
Sbjct: 87 DVINQTW 93
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 72.1 bits (169), Expect = 2e-13
Identities = 28/75 (37%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Frame = +1
Query: 40 FRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVY 219
++V+++ D + E+ V GP D++Y+GG +K ++ P YPY PS+ F+TK++HPNV
Sbjct: 20 YKVEMIN-DGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVD 78
Query: 220 E-NGDLCISILHPPW 261
E +G +C+ +++ W
Sbjct: 79 EMSGSVCLDVINQTW 93
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 70.5 bits (165), Expect = 6e-13
Identities = 27/67 (40%), Positives = 42/67 (62%)
Frame = +1
Query: 61 EDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCI 240
EDN+F W+ I G DT+++G ++ + F DYP+ PP ++F T +HPNV G++C+
Sbjct: 61 EDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICL 120
Query: 241 SILHPPW 261
IL W
Sbjct: 121 DILQDKW 127
Score = 41.5 bits (93), Expect = 3e-04
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +3
Query: 291 ERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMY 401
++W+ VRT+LLS+ SLL EPN SP N A+ ++
Sbjct: 125 DKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLW 161
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 68.9 bits (161), Expect = 2e-12
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Frame = +1
Query: 64 DNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYE-NGDLCI 240
D+L + V GP D+LYQGG +K ++ P YPY PS+ F+ K++HPNV E +G +C+
Sbjct: 27 DDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCL 86
Query: 241 SILHPPW 261
+++ W
Sbjct: 87 DVINQTW 93
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 68.5 bits (160), Expect = 2e-12
Identities = 26/61 (42%), Positives = 39/61 (63%)
Frame = +1
Query: 79 WEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPP 258
+ V I GP + Y+GG FK + P +YP + P +RFLTK++HPN+ + G +C+ IL
Sbjct: 4 FNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDK 63
Query: 259 W 261
W
Sbjct: 64 W 64
Score = 35.5 bits (78), Expect = 0.021
Identities = 15/49 (30%), Positives = 30/49 (61%)
Frame = +3
Query: 291 ERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYRRWRDSKGKDKE 437
++W+P +RTVLLS+ +LL+ PN P + + + + W+ ++ + E
Sbjct: 62 DKWSPALQIRTVLLSIQALLSAPNPDDPLSENIA---KHWKSNEAEAVE 107
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 68.1 bits (159), Expect = 3e-12
Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +1
Query: 19 REEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTK 198
R + G RV DNL I GP T Y+GG F+ + P YP+ PP ++F TK
Sbjct: 16 RNQDSSGIRV-CPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTK 74
Query: 199 VWHPNV-YENGDLCISILHPPW 261
VWHPN+ ++G +C+ IL W
Sbjct: 75 VWHPNISSQSGAICLDILKDQW 96
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 67.7 bits (158), Expect = 4e-12
Identities = 29/83 (34%), Positives = 49/83 (59%)
Frame = +1
Query: 13 SAREEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFL 192
S E P +G +V ++ +++ + I GP T Y+ G F+ + D+P+SPP F+
Sbjct: 21 SLDESPPDGIKV-VVNDEDFSQICADIEGPVGTPYENGLFRMKLALSHDFPHSPPKGYFM 79
Query: 193 TKVWHPNVYENGDLCISILHPPW 261
TK++HPNV NG++C++ L W
Sbjct: 80 TKIFHPNVASNGEICVNTLKKDW 102
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 66.5 bits (155), Expect = 1e-11
Identities = 26/67 (38%), Positives = 41/67 (61%)
Frame = +1
Query: 61 EDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCI 240
EDN+F W+ I G DT+++G ++ + F DYP+ P ++F T +HPNV G++C+
Sbjct: 62 EDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNICL 121
Query: 241 SILHPPW 261
IL W
Sbjct: 122 DILQDKW 128
Score = 40.3 bits (90), Expect = 7e-04
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +3
Query: 291 ERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMY 401
++W+ VRT+LLS+ SLL EPN SP N A+ ++
Sbjct: 126 DKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLW 162
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 66.5 bits (155), Expect = 1e-11
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +1
Query: 28 PVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKV-W 204
P GFR K+ DNL +W + + G P TLY ++ ++FP YP P + F++
Sbjct: 31 PPTGFRHKVT--DNLQKWTIDVTGAPGTLYANETYQLQVEFPEHYPMEAPQVVFVSPAPS 88
Query: 205 HPNVYENGDLCISILHPPW 261
HP++Y NG +C+ IL+ W
Sbjct: 89 HPHIYSNGHICLDILYDSW 107
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 65.3 bits (152), Expect = 2e-11
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +1
Query: 28 PVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKV-W 204
P GF+ K+ DNL W + + G P TLY ++ + FP YP P + FL
Sbjct: 31 PPTGFKHKVT--DNLQRWIIEVIGAPGTLYANDTYQLQVDFPEHYPMESPQVIFLHPAPL 88
Query: 205 HPNVYENGDLCISILHPPW 261
HP++Y NG +C+ IL+ W
Sbjct: 89 HPHIYSNGHICLDILYDSW 107
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 63.7 bits (148), Expect = 7e-11
Identities = 28/65 (43%), Positives = 37/65 (56%)
Frame = +1
Query: 58 GEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLC 237
G NL W I G T ++GG+F M F DYP PP +F +HPNVY +G +C
Sbjct: 35 GTVNLMVWHCTIPGKAGTDWEGGFFPLTMHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVC 94
Query: 238 ISILH 252
+SIL+
Sbjct: 95 LSILN 99
Score = 29.9 bits (64), Expect = 1.1
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 297 WNPTQSVRTVLLSVISLLNEPNTFSPANVD 386
W P +V+ +L+ + LL+ PN PA D
Sbjct: 104 WRPAITVKQILVGIQDLLDTPNPADPAQTD 133
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 63.3 bits (147), Expect = 9e-11
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +1
Query: 28 PVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKV-W 204
P GF+ ++ DNL +W + + G P TLY + ++FP YP P + F+
Sbjct: 31 PPTGFKHRVT--DNLQKWVIEVTGAPGTLYANETYNLQVEFPQHYPMEAPQVIFVPPAPL 88
Query: 205 HPNVYENGDLCISILHPPW 261
HP++Y NG +C+ IL+ W
Sbjct: 89 HPHIYSNGHICLDILYDSW 107
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 62.1 bits (144), Expect = 2e-10
Identities = 23/59 (38%), Positives = 36/59 (61%)
Frame = +1
Query: 82 EVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPP 258
+ I GP DT+Y G F ++ P YP+ PP + F T ++HPN+ +G +C+ IL+ P
Sbjct: 48 DAQIEGPEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLP 106
Score = 28.3 bits (60), Expect = 3.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 285 PCERWNPTQSVRTVLLSVISLLNEPN 362
P W P+ ++ TVL S+ LL+EPN
Sbjct: 107 PKGAWQPSLNISTVLTSMRLLLSEPN 132
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 61.7 bits (143), Expect = 3e-10
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +1
Query: 28 PVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKV-W 204
P GF+ ++ DNL W + + G P TLY ++ ++FP YP P + F
Sbjct: 31 PPSGFKHRV--SDNLQRWIIEVHGVPGTLYANETYQLQVEFPEHYPMEAPQVIFQHPAPL 88
Query: 205 HPNVYENGDLCISILHPPW 261
HP++Y NG +C+ +L+ W
Sbjct: 89 HPHIYSNGHICLDVLYDSW 107
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 61.7 bits (143), Expect = 3e-10
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +1
Query: 61 EDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCI 240
E+N+FEW+ AI GP DT ++GG + ++ P DYP+ PPS LT + N +C+
Sbjct: 37 EENIFEWQFAIRGPGDTEFEGGIYHGRIQLPADYPFKPPSFMLLTP--NGRFETNTKICL 94
Query: 241 SI--LHP 255
SI HP
Sbjct: 95 SISNYHP 101
Score = 26.6 bits (56), Expect = 9.8
Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +3
Query: 291 ERWNPTQSVRTVLLSVISLL-NEPN 362
E W P+ SVRT L+++I+ + PN
Sbjct: 102 EHWQPSWSVRTALVALIAFMPTSPN 126
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 51.2 bits (117), Expect = 4e-07
Identities = 23/68 (33%), Positives = 38/68 (55%)
Frame = +1
Query: 58 GEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLC 237
G+++L +EV I P + Y G F + YP+ P ++ TKV+HPN+ G++C
Sbjct: 56 GKNDLMNFEVTI-KPDEGYYLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGNVC 114
Query: 238 ISILHPPW 261
++IL W
Sbjct: 115 LNILREDW 122
Score = 32.7 bits (71), Expect = 0.15
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 291 ERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYR 404
E W P ++ TV+ + L EPN P N +A+ + R
Sbjct: 120 EDWKPVLNINTVIYGLFHLFTEPNYEDPLNHEAAAVLR 157
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 49.6 bits (113), Expect = 1e-06
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +1
Query: 61 EDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLT--KVWHPNVYENGDL 234
E+ + A+ G P T Y G F + PP YP+ PP + + + +PN+YE+G +
Sbjct: 688 EERMDLLRAALVGAPGTPYHDGLFFFDIMLPPQYPHEPPMVHYHSGGMRLNPNLYESGRV 747
Query: 235 CISILH 252
C+S+L+
Sbjct: 748 CLSLLN 753
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family protein
low similarity to ubiquitin-conjugating BIR-domain enzyme
APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating
enzyme [Mus musculus] GI:3319990; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1102
Score = 48.8 bits (111), Expect = 2e-06
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +1
Query: 61 EDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVW--HPNVYENGDL 234
ED + I G T YQ G F P DYP PPS + + W +PN+YE G +
Sbjct: 876 EDRMDLLRAVIVGAFGTPYQDGLFFFDFHLPSDYPSVPPSAYYHSGGWRLNPNLYEEGKV 935
Query: 235 CISILH 252
C+S+L+
Sbjct: 936 CLSLLN 941
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 48.8 bits (111), Expect = 2e-06
Identities = 21/64 (32%), Positives = 32/64 (50%)
Frame = +1
Query: 64 DNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCIS 243
+++ EW + G T + GG++ +KFPP+YPY PP I T + L +S
Sbjct: 32 NDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYKPPGITMTTPNGRFMTQKKICLSMS 91
Query: 244 ILHP 255
HP
Sbjct: 92 DFHP 95
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 48.4 bits (110), Expect = 3e-06
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +1
Query: 64 DNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLT 195
+++ EW + G T + GG++ +KFPP+YPY PP I T
Sbjct: 32 NDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYKPPGITMTT 75
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 45.2 bits (102), Expect = 3e-05
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +1
Query: 79 WEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKV 201
W I GPP+T Y+G F+ + +YP SPP++RF T++
Sbjct: 47 WTGTILGPPNTAYEGKIFQLKLFCGKEYPESPPTVRFQTRI 87
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 41.5 bits (93), Expect = 3e-04
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +1
Query: 79 WEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKV 201
W I GP +T Y+G F+ + DYP SPP++RF +++
Sbjct: 47 WTGTILGPHNTAYEGKIFQLKLFCGKDYPESPPTVRFQSRI 87
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +1
Query: 91 IFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVW--HPNVYENGDLCISIL 249
I G T Y G F ++FP YP PP++ + + +PN+Y G +C+S+L
Sbjct: 307 IIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVHYHSGGLRINPNLYNCGKVCLSLL 361
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +1
Query: 91 IFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVW--HPNVYENGDLCISIL 249
I G T Y G F ++FP YP PP + + + +PN+Y+ G +C+S++
Sbjct: 641 IIGAEGTPYHDGLFFFDIQFPDTYPSVPPKVHYHSGGLRINPNLYKCGKVCLSLI 695
Score = 34.3 bits (75), Expect = 0.049
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +1
Query: 91 IFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVW--HPNVYENGDLCISI 246
I G T Y G F ++FP YP PP++ + + +PN+Y G + +SI
Sbjct: 953 IIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVYYHSGGLRINPNLYNCGKVLVSI 1006
>At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 37.9 bits (84), Expect = 0.004
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +1
Query: 79 WEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKV 201
W I GP +T+++G ++ + DYP PP++RF ++V
Sbjct: 49 WTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRV 89
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 37.9 bits (84), Expect = 0.004
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +1
Query: 91 IFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVW--HPNVYENGDLCISIL 249
I G T Y G F + FP YP +PP + + + +PN+Y G +C+S+L
Sbjct: 368 IIGAQGTPYHDGLFFFDIFFPDTYPSTPPIVHYHSGGLRINPNLYNCGKVCLSLL 422
>At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 145
Score = 37.5 bits (83), Expect = 0.005
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +1
Query: 79 WEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKV 201
W I GP +T+++G ++ + DYP PP++RF +++
Sbjct: 48 WTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRI 88
>At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 147
Score = 33.5 bits (73), Expect = 0.085
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 79 WEVAIFGPPD-TLYQGGYFKAHMKFPPDYPYSPPSIRFLTKV 201
W I GP + T+++G ++ + DYP PP++RF ++V
Sbjct: 49 WTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRV 90
>At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 33.1 bits (72), Expect = 0.11
Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 79 WEVAIFGPPD-TLYQGGYFKAHMKFPPDYPYSPPSIRFLTKV 201
W I GP + T+++G ++ + DYP PP++RF +++
Sbjct: 48 WTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRI 89
>At1g75230.2 68414.m08739 HhH-GPD base excision DNA repair family
protein contains Pfam domain PF00730: HhH-GPD
superfamily base excision DNA repair protein
Length = 394
Score = 32.7 bits (71), Expect = 0.15
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +3
Query: 267 PQSGELPCERWNPTQSVRT-VLLSVISLLNEPNTFSPANVDASVMYRRWRDSKGKDKEYE 443
P E CE+W P +SV + L +I N P + A A++ + + D + +++E +
Sbjct: 305 PSKMEQLCEKWRPYRSVASWYLWRLIESKNTPPNAAAATAGAALSFPQLEDIQQQEQEQQ 364
Query: 444 NIIRKQAQVARME 482
+ +Q Q M+
Sbjct: 365 HQQHQQQQPQLMD 377
>At1g75230.1 68414.m08740 HhH-GPD base excision DNA repair family
protein contains Pfam domain PF00730: HhH-GPD
superfamily base excision DNA repair protein
Length = 391
Score = 32.7 bits (71), Expect = 0.15
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +3
Query: 267 PQSGELPCERWNPTQSVRT-VLLSVISLLNEPNTFSPANVDASVMYRRWRDSKGKDKEYE 443
P E CE+W P +SV + L +I N P + A A++ + + D + +++E +
Sbjct: 305 PSKMEQLCEKWRPYRSVASWYLWRLIESKNTPPNAAAATAGAALSFPQLEDIQQQEQEQQ 364
Query: 444 NIIRKQAQVARME 482
+ +Q Q M+
Sbjct: 365 HQQHQQQQPQLMD 377
>At1g02890.1 68414.m00256 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family; similar to
mitochondrial sorting protein 1 (MSP1) (TAT-binding
homolog 4) (Swiss-Prot:P28737) [Saccharomyces
cerevisiae]
Length = 1252
Score = 31.5 bits (68), Expect = 0.34
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +3
Query: 255 PVDDPQSGELPCERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYRRWRDSKGKDK 434
P +P++G +P +P +R +L SLL +P+ F + ++ R+ + K
Sbjct: 364 PFQEPEAGNIP----DPAYEIRPIL----SLLGDPSEFDLRGSISKILVDERREVREMPK 415
Query: 435 EYENIIRKQAQV-ARMEAEKEGI 500
EYE R A V R +A K+ +
Sbjct: 416 EYE---RPSASVLTRRQAHKDSL 435
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 30.3 bits (65), Expect = 0.80
Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = +3
Query: 405 RWRDSK-GKDKEYENIIRKQAQVARMEAEKE 494
RW++++ GK KE E +RK+ + R+E E+E
Sbjct: 231 RWKEAEDGKKKEEEERLRKEEEERRIEEERE 261
>At4g16140.1 68417.m02445 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 164
Score = 29.1 bits (62), Expect = 1.8
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 94 FGPPDTLYQGGYFKAHMKFPPDYPYSPP 177
+ PP + GGY+ K +YPY+PP
Sbjct: 90 YRPPPSSSSGGYYYPPPKSGGNYPYTPP 117
>At2g38950.1 68415.m04786 transcription factor jumonji (jmj) family
protein / zinc finger (C5HC2 type) family protein
contains Pfam domains, PF02375: jmjN domain, PF02373:
jmjC domain and PF02928: C5HC2 zinc finger
Length = 708
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 399 YRRWRDSKGKDKEYENIIRKQAQVARMEAE 488
Y RW DS G D + NII+ + ++ + E
Sbjct: 492 YTRWNDSCGTDGLFSNIIKSRIKLEKNRRE 521
>At1g55000.1 68414.m06282 peptidoglycan-binding LysM
domain-containing protein contains Pfam profile PF01476:
LysM domain
Length = 221
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 196 KVWHPNVYENGDLCISILHPPWMILSLANCPANV 297
KVW+ +V DL +S PW I L PA+V
Sbjct: 29 KVWN-SVATEDDLVVSAFTAPWRIKELVGRPASV 61
>At3g14950.1 68416.m01891 tetratricopeptide repeat (TPR)-containing
protein low similarity to SP|Q99615 DnaJ homolog
subfamily C member 7 (Tetratricopeptide repeat protein
2) {Homo sapiens}; contains Pfam profile PF00515: TPR
Domain
Length = 721
Score = 27.5 bits (58), Expect = 5.6
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -1
Query: 113 SVSGGPKIATSHSNRLSSPSNLTRKPSTGSSRAEFG 6
SV P + S S+ LSS + ++ +T SS A+FG
Sbjct: 84 SVQPVPSASKSKSSNLSSAAKSSKSSTTPSSAAQFG 119
>At1g55430.1 68414.m06340 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 657
Score = 27.5 bits (58), Expect = 5.6
Identities = 12/52 (23%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 351 NEPNTFSPANVD--ASVMYRRWRDSKGKDKEYENIIRKQAQVARMEAEKEGI 500
+ P TF+ + + AS++++ WRDS ++ E +I + +A + +
Sbjct: 88 SHPLTFTALDPEFNASIIHQNWRDSSASEESSEELINEVVDYDHEDAGDDAV 139
>At5g61790.1 68418.m07754 calnexin 1 (CNX1) identical to calnexin
homolog 1, Arabidopsis thaliana, EMBL:AT08315
[SP|P29402]
Length = 530
Score = 27.1 bits (57), Expect = 7.4
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 121 GGYFKAHMKFPPDYPY 168
G Y + H+KFPP PY
Sbjct: 161 GEYVEHHLKFPPSVPY 176
>At5g61620.1 68418.m07732 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 317
Score = 26.6 bits (56), Expect = 9.8
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Frame = +1
Query: 142 MKFPPDYPYSPPSIRFLTKVWHPN---VYENGDLCISILHP 255
M++ P Y PP F ++HPN Y N + + +HP
Sbjct: 222 MEYMPIYQPIPPYYNFPPIMYHPNYPMYYANPQVPVRFVHP 262
>At4g39850.1 68417.m05646 peroxisomal ABC transporter (PXA1)
identical to peroxisomal ABC transporter PXA1
GI:15320529 from [Arabidopsis thaliana]; contains Pfam
profile PF00005: ABC transporter;
Length = 1337
Score = 26.6 bits (56), Expect = 9.8
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -1
Query: 356 LVEE*DYREEYGANRLCRVPTFAGQFARLRIIHGGW 249
LVE+ R E G+N L P +G+ + R++ G W
Sbjct: 463 LVEDLTLRVEQGSNLLITGPNGSGKSSLFRVLGGLW 498
>At3g16020.1 68416.m02026 hypothetical protein
Length = 98
Score = 26.6 bits (56), Expect = 9.8
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +1
Query: 190 LTKVWHPNVYENGDLCISILHPPWMILSLANCPANVGTLHNRFAP 324
L K H + E GDL +L + SL + N+ LHN FAP
Sbjct: 9 LLKYIHQQLEEKGDLQAIVL----LKYSLYSMSVNIHGLHNDFAP 49
>At2g02680.1 68415.m00207 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 649
Score = 26.6 bits (56), Expect = 9.8
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -3
Query: 168 IRVVRGEFHVCLEVSTLIKCIRRSEDCHF 82
+ + G+F +C E +TL IR D H+
Sbjct: 510 LNCIEGDFIICFECATLPYVIRYKHDDHY 538
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,337,178
Number of Sequences: 28952
Number of extensions: 289759
Number of successful extensions: 857
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 927799552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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