Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301B03f
         (438 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g22235.1 68416.m02808 expressed protein                             28   2.4  
At1g23240.2 68414.m02908 caleosin-related family protein similar...    28   3.2  

>At3g22235.1 68416.m02808 expressed protein 
          Length = 75

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 8/24 (33%), Positives = 17/24 (70%)
 Frame = -1

Query: 168 WRVLELFIISNYIFNFVVNSEIAC 97
           W V+ +F +S+YI+ ++ + E+ C
Sbjct: 26  WMVVTMFYVSDYIYIYIYSVELGC 49


>At1g23240.2 68414.m02908 caleosin-related family protein similar to
           caleosin GB:AAF13743 GI:6478218 from [Sesamum indicum];
           similar to Ca+2-binding EF hand protein GB:AAB71227
           [Glycine max]; contains Pfam profilePF05042: Caleosin
           related protein
          Length = 174

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +3

Query: 228 RFL*SHYPFVFNYHSLFLSETILLQSLQNSVK--REPADIQDVFIQSQFIR 374
           RF+ S +  +FN H+    + +  + +Q  +K  R+P DI   F+ S+  +
Sbjct: 122 RFVESKFEEIFNKHARTHKDALTAEEIQKMLKTNRDPFDITGWFVVSELFQ 172


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,526,233
Number of Sequences: 28952
Number of extensions: 101000
Number of successful extensions: 158
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 158
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 692941200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)