Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS301A07f
(412 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 138 1e-33
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 138 1e-33
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 138 1e-33
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 138 1e-33
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 138 1e-33
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 138 1e-33
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 134 2e-32
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 134 2e-32
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 134 2e-32
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 129 8e-31
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 80 7e-16
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 65 2e-11
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 60 8e-10
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 59 1e-09
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 57 5e-09
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 44 4e-05
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 40 5e-04
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.043
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 33 0.099
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 3.7
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 27 3.7
At5g66360.2 68418.m08367 ribosomal RNA adenine dimethylase famil... 26 8.6
At5g66360.1 68418.m08366 ribosomal RNA adenine dimethylase famil... 26 8.6
At3g48860.2 68416.m05337 expressed protein 26 8.6
At3g48860.1 68416.m05336 expressed protein 26 8.6
At3g07870.1 68416.m00962 F-box family protein contains F-box dom... 26 8.6
At2g46240.1 68415.m05750 IQ domain-containing protein / BAG doma... 26 8.6
At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin ... 26 8.6
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 138 bits (335), Expect = 1e-33
Identities = 63/72 (87%), Positives = 67/72 (93%)
Frame = +3
Query: 111 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 290
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 291 GILTLKYPIEHG 326
GILTLKYPIEHG
Sbjct: 65 GILTLKYPIEHG 76
Score = 69.3 bits (162), Expect = 9e-13
Identities = 28/33 (84%), Positives = 28/33 (84%)
Frame = +1
Query: 313 PSNTEIVTNWDDMEKIWHHTFYNELRVAPEEHP 411
P IV NWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 72 PIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHP 104
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 138 bits (335), Expect = 1e-33
Identities = 63/72 (87%), Positives = 67/72 (93%)
Frame = +3
Query: 111 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 290
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 291 GILTLKYPIEHG 326
GILTLKYPIEHG
Sbjct: 65 GILTLKYPIEHG 76
Score = 69.7 bits (163), Expect = 7e-13
Identities = 28/33 (84%), Positives = 29/33 (87%)
Frame = +1
Query: 313 PSNTEIVTNWDDMEKIWHHTFYNELRVAPEEHP 411
P IV+NWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 72 PIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP 104
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 138 bits (335), Expect = 1e-33
Identities = 63/72 (87%), Positives = 67/72 (93%)
Frame = +3
Query: 111 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 290
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 291 GILTLKYPIEHG 326
GILTLKYPIEHG
Sbjct: 65 GILTLKYPIEHG 76
Score = 69.3 bits (162), Expect = 9e-13
Identities = 28/33 (84%), Positives = 28/33 (84%)
Frame = +1
Query: 313 PSNTEIVTNWDDMEKIWHHTFYNELRVAPEEHP 411
P IV NWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 72 PIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHP 104
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 138 bits (335), Expect = 1e-33
Identities = 63/72 (87%), Positives = 67/72 (93%)
Frame = +3
Query: 111 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 290
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 291 GILTLKYPIEHG 326
GILTLKYPIEHG
Sbjct: 65 GILTLKYPIEHG 76
Score = 69.3 bits (162), Expect = 9e-13
Identities = 28/33 (84%), Positives = 28/33 (84%)
Frame = +1
Query: 313 PSNTEIVTNWDDMEKIWHHTFYNELRVAPEEHP 411
P IV NWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 72 PIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHP 104
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 138 bits (335), Expect = 1e-33
Identities = 63/72 (87%), Positives = 67/72 (93%)
Frame = +3
Query: 111 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 290
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 291 GILTLKYPIEHG 326
GILTLKYPIEHG
Sbjct: 65 GILTLKYPIEHG 76
Score = 69.7 bits (163), Expect = 7e-13
Identities = 28/33 (84%), Positives = 29/33 (87%)
Frame = +1
Query: 313 PSNTEIVTNWDDMEKIWHHTFYNELRVAPEEHP 411
P IV+NWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 72 PIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP 104
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 138 bits (335), Expect = 1e-33
Identities = 63/72 (87%), Positives = 67/72 (93%)
Frame = +3
Query: 111 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 290
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 291 GILTLKYPIEHG 326
GILTLKYPIEHG
Sbjct: 65 GILTLKYPIEHG 76
Score = 69.3 bits (162), Expect = 9e-13
Identities = 28/33 (84%), Positives = 28/33 (84%)
Frame = +1
Query: 313 PSNTEIVTNWDDMEKIWHHTFYNELRVAPEEHP 411
P IV NWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 72 PIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHP 104
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 134 bits (324), Expect = 2e-32
Identities = 59/72 (81%), Positives = 66/72 (91%)
Frame = +3
Query: 111 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 290
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 291 GILTLKYPIEHG 326
GILTLKYPIEHG
Sbjct: 65 GILTLKYPIEHG 76
Score = 68.9 bits (161), Expect = 1e-12
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +1
Query: 313 PSNTEIVTNWDDMEKIWHHTFYNELRVAPEEHP 411
P +V+NWDDMEKIWHHTFYNELR+APEEHP
Sbjct: 72 PIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHP 104
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 134 bits (324), Expect = 2e-32
Identities = 59/72 (81%), Positives = 66/72 (91%)
Frame = +3
Query: 111 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 290
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 291 GILTLKYPIEHG 326
GILTLKYPIEHG
Sbjct: 65 GILTLKYPIEHG 76
Score = 68.9 bits (161), Expect = 1e-12
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +1
Query: 313 PSNTEIVTNWDDMEKIWHHTFYNELRVAPEEHP 411
P +V+NWDDMEKIWHHTFYNELR+APEEHP
Sbjct: 72 PIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHP 104
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 134 bits (324), Expect = 2e-32
Identities = 59/72 (81%), Positives = 66/72 (91%)
Frame = +3
Query: 111 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 290
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 291 GILTLKYPIEHG 326
GILTLKYPIEHG
Sbjct: 65 GILTLKYPIEHG 76
Score = 68.9 bits (161), Expect = 1e-12
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +1
Query: 313 PSNTEIVTNWDDMEKIWHHTFYNELRVAPEEHP 411
P +V+NWDDMEKIWHHTFYNELR+APEEHP
Sbjct: 72 PIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHP 104
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 129 bits (311), Expect = 8e-31
Identities = 56/72 (77%), Positives = 67/72 (93%)
Frame = +3
Query: 111 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 290
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 291 GILTLKYPIEHG 326
GIL+LKYPIEHG
Sbjct: 66 GILSLKYPIEHG 77
Score = 66.1 bits (154), Expect = 9e-12
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = +1
Query: 313 PSNTEIVTNWDDMEKIWHHTFYNELRVAPEEHP 411
P +V+NWDDMEKIWHHTFYNELR+ PEEHP
Sbjct: 73 PIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHP 105
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 79.8 bits (188), Expect = 7e-16
Identities = 37/67 (55%), Positives = 47/67 (70%)
Frame = +3
Query: 126 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 305
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R ILTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 306 KYPIEHG 326
K P+EHG
Sbjct: 59 KDPMEHG 65
Score = 64.9 bits (151), Expect = 2e-11
Identities = 26/33 (78%), Positives = 27/33 (81%)
Frame = +1
Query: 313 PSNTEIVTNWDDMEKIWHHTFYNELRVAPEEHP 411
P IV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 61 PMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 65.3 bits (152), Expect = 2e-11
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = +1
Query: 313 PSNTEIVTNWDDMEKIWHHTFYNELRVAPEEHP 411
P +V+NWDDMEKIW+HTFY+ELRVAPEEHP
Sbjct: 27 PMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHP 59
Score = 48.8 bits (111), Expect = 1e-06
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = +3
Query: 234 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 326
MVGM + D +VGD+A+++ GILTL YP+EHG
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHG 31
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 59.7 bits (138), Expect = 8e-10
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Frame = +3
Query: 126 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 299
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+ R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQL 66
Query: 300 TLKYPIEHG 326
+ YP+ +G
Sbjct: 67 DINYPVHNG 75
Score = 50.0 bits (114), Expect = 6e-07
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +1
Query: 307 NTPSNTEIVTNWDDMEKIWHHTFYNELRVAPEE 405
N P + IV NWDDME +W H FYNEL++ P +
Sbjct: 69 NYPVHNGIVQNWDDMEHVWDHAFYNELKINPSD 101
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 58.8 bits (136), Expect = 1e-09
Identities = 30/67 (44%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Frame = +3
Query: 111 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV---GMGQKDSYVGDEAQ 281
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ + +D+ D+ +
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 282 SKRGILT 302
KR + T
Sbjct: 65 GKRKLYT 71
Score = 41.9 bits (94), Expect = 2e-04
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 310 TPSNTEIVTNWDDMEKIWHHTFYNELRVAPEEHP 411
+P+ IVT+WD ++ +W H F N L + P EHP
Sbjct: 87 SPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHP 120
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 56.8 bits (131), Expect = 5e-09
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +3
Query: 111 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 212
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 37.5 bits (83), Expect = 0.003
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 310 TPSNTEIVTNWDDMEKIWHHTFYNELRVAPEEHP 411
+P IV++WD ++ IW H F + L + P EHP
Sbjct: 93 SPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHP 126
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 44.0 bits (99), Expect = 4e-05
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +3
Query: 126 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 272
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 40.3 bits (90), Expect = 5e-04
Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 21/89 (23%)
Frame = +3
Query: 123 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG-----------------RPRHQ-GVMVGMG 248
A+V+DNG+G K GFAG+ P + P++V + +H GV +
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL- 66
Query: 249 QKDSYVGDEAQSK-RGILT--LKYPIEHG 326
D Y+GDEA +K R T L YPIEHG
Sbjct: 67 --DFYIGDEALAKSRSSSTHNLHYPIEHG 93
Score = 34.3 bits (75), Expect = 0.032
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 331 VTNWDDMEKIWHHTFYNELRVAPEEH 408
V +WD ME+ W +N LR PE+H
Sbjct: 95 VEDWDAMERYWQQCIFNYLRCDPEDH 120
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.043
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -1
Query: 247 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 110
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 32.7 bits (71), Expect = 0.099
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 126 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 218
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 3.7
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 223 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 101
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 27.5 bits (58), Expect = 3.7
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 123 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 215
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At5g66360.2 68418.m08367 ribosomal RNA adenine dimethylase family
protein similar to SP|P41819 Dimethyladenosine
transferase (EC 2.1.1.-) (S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase) {Saccharomyces
cerevisiae}; contains Pfam profile PF00398: ribosomal
RNA adenine dimethylase family protein
Length = 380
Score = 26.2 bits (55), Expect = 8.6
Identities = 14/61 (22%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = -3
Query: 269 SYIRVLLSHTDHHA-LMAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFVAHLEL 93
SY+ L+ D H+ P HDR G + E H G + +G + + +
Sbjct: 18 SYLSSLVFRRDSHSQARTKPDHDRRRRGYERDVRIEEKKEHDGLFLCKSKGQHLLTNTRI 77
Query: 92 V 90
+
Sbjct: 78 L 78
>At5g66360.1 68418.m08366 ribosomal RNA adenine dimethylase family
protein similar to SP|P41819 Dimethyladenosine
transferase (EC 2.1.1.-) (S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase) {Saccharomyces
cerevisiae}; contains Pfam profile PF00398: ribosomal
RNA adenine dimethylase family protein
Length = 352
Score = 26.2 bits (55), Expect = 8.6
Identities = 14/61 (22%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = -3
Query: 269 SYIRVLLSHTDHHA-LMAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFVAHLEL 93
SY+ L+ D H+ P HDR G + E H G + +G + + +
Sbjct: 18 SYLSSLVFRRDSHSQARTKPDHDRRRRGYERDVRIEEKKEHDGLFLCKSKGQHLLTNTRI 77
Query: 92 V 90
+
Sbjct: 78 L 78
>At3g48860.2 68416.m05337 expressed protein
Length = 577
Score = 26.2 bits (55), Expect = 8.6
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -1
Query: 202 EGNTARGASSPAKPALHIPEPLSTTNAATSSSH 104
E + R AS+ KPA H P +S+T + +S+ +
Sbjct: 82 EDLSLRFASASLKPARHAPSSISSTGSNSSNGN 114
>At3g48860.1 68416.m05336 expressed protein
Length = 494
Score = 26.2 bits (55), Expect = 8.6
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -1
Query: 202 EGNTARGASSPAKPALHIPEPLSTTNAATSSSH 104
E + R AS+ KPA H P +S+T + +S+ +
Sbjct: 82 EDLSLRFASASLKPARHAPSSISSTGSNSSNGN 114
>At3g07870.1 68416.m00962 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 26.2 bits (55), Expect = 8.6
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -1
Query: 223 WRGLPTIEGNTARGASSPAKPA--LHIPEPL 137
WR + T G + +SSP KP LH P+
Sbjct: 55 WRSVLTQHGRLSSSSSSPTKPCLLLHCDSPI 85
>At2g46240.1 68415.m05750 IQ domain-containing protein / BAG
domain-containing protein contains Pfam profiles
PF00612: IQ calmodulin-binding motif, PF02179: BAG
(Apoptosis regulator Bcl-2 protein) domain
Length = 1043
Score = 26.2 bits (55), Expect = 8.6
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 301 PSNTPSNTEIVTNWDDMEKIWHHTFYNELRVAPEEHP 411
PS++P N E ++ + + LR++PEEHP
Sbjct: 693 PSDSPVNLEHSQLTEENKMVSDTNLEKVLRLSPEEHP 729
>At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin
family protein / PAN domain-containing protein contains
Pfam profiles: PF01453 lectin (probable mannose
binding), PF00024 PAN domain
Length = 764
Score = 26.2 bits (55), Expect = 8.6
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 111 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM 236
E++ A + + G G+C A +D + V I GR +GV+
Sbjct: 632 EDLEAKLTEYGFGLCAADKDVEDFGKTVLALITGRYEPEGVV 673
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,416,722
Number of Sequences: 28952
Number of extensions: 242410
Number of successful extensions: 682
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 680
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 615542944
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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