Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0012
(692 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g26530.1 68417.m03822 fructose-bisphosphate aldolase, putativ... 100 1e-21
At4g26520.1 68417.m03820 fructose-bisphosphate aldolase, cytopla... 98 4e-21
At2g36460.1 68415.m04475 fructose-bisphosphate aldolase, putativ... 96 2e-20
At3g52930.1 68416.m05834 fructose-bisphosphate aldolase, putativ... 90 1e-18
At5g03690.2 68418.m00329 fructose-bisphosphate aldolase, putativ... 85 3e-17
At5g03690.1 68418.m00328 fructose-bisphosphate aldolase, putativ... 85 3e-17
At2g21330.1 68415.m02538 fructose-bisphosphate aldolase, putativ... 85 3e-17
At2g01140.1 68415.m00023 fructose-bisphosphate aldolase, putativ... 81 5e-16
At4g38970.2 68417.m05522 fructose-bisphosphate aldolase, putativ... 81 7e-16
At4g38970.1 68417.m05521 fructose-bisphosphate aldolase, putativ... 81 7e-16
At1g49850.1 68414.m05589 zinc finger (C3HC4-type RING finger) fa... 30 1.3
At2g43970.2 68415.m05468 La domain-containing protein contains P... 29 3.9
At2g43970.1 68415.m05467 La domain-containing protein contains P... 29 3.9
At1g56080.1 68414.m06439 expressed protein 29 3.9
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 28 5.1
At3g49650.1 68416.m05426 kinesin motor protein-related several k... 28 6.8
At5g60210.1 68418.m07547 cytoplasmic linker protein-related cont... 27 8.9
>At4g26530.1 68417.m03822 fructose-bisphosphate aldolase, putative
strong similarity to SP|P22197 Fructose-bisphosphate
aldolase, cytoplasmic isozyme (EC 4.1.2.13) {Arabidopsis
thaliana}
Length = 358
Score = 100 bits (239), Expect = 1e-21
Identities = 55/119 (46%), Positives = 66/119 (55%)
Frame = +2
Query: 212 GQAFAXXXXXXXXXXXXXXXQLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEK 391
G+ FA +LLF+S +SGVILF ETLYQK DG P V LL +
Sbjct: 37 GKRFASINVENIESNRQALRELLFTSPGTFP-CLSGVILFEETLYQKTTDGKPFVELLME 95
Query: 392 KGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKRTAATSPSGVAC*RLAATPP 568
G+IPGIKVDKGVV L G+ E TTQGLD L RC +Y + A A ++ AT P
Sbjct: 96 NGVIPGIKVDKGVVDLAGTNGETTTQGLDSLGARCQEYYKAGARFAKWRAVLKIGATEP 154
Score = 83.8 bits (198), Expect = 1e-16
Identities = 39/58 (67%), Positives = 42/58 (72%)
Frame = +1
Query: 514 GCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDL 687
G FAKWR VLKIG PS +IQENA LARYA ICQ +VPIVEPEVL DG HD+
Sbjct: 137 GARFAKWRAVLKIGATEPSELSIQENAKGLARYAIICQENGLVPIVEPEVLTDGSHDI 194
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/40 (65%), Positives = 29/40 (72%)
Frame = +3
Query: 132 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTE 251
+EL K A+ I P KGILAADESTGT+GKR I VEN E
Sbjct: 10 DELIKTAKYIATPGKGILAADESTGTIGKRFASINVENIE 49
>At4g26520.1 68417.m03820 fructose-bisphosphate aldolase,
cytoplasmic identical to SP|P22197 Fructose-bisphosphate
aldolase, cytoplasmic isozyme (EC 4.1.2.13) {Arabidopsis
thaliana}
Length = 358
Score = 98.3 bits (234), Expect = 4e-21
Identities = 55/119 (46%), Positives = 65/119 (54%)
Frame = +2
Query: 212 GQAFAXXXXXXXXXXXXXXXQLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEK 391
G+ FA +LLF+S +SGVILF ETLYQK DG P V LL +
Sbjct: 37 GKRFAGINVENTESNRQAYRELLFTSPGSYP-CLSGVILFEETLYQKTSDGKPFVDLLME 95
Query: 392 KGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKRTAATSPSGVAC*RLAATPP 568
G+IPGIKVDKG+V L G+ E TTQGLD L RC QY A A ++ AT P
Sbjct: 96 NGVIPGIKVDKGLVDLAGTNGETTTQGLDSLGARCQQYYEAGARFAKWRAFFKIGATEP 154
Score = 79.8 bits (188), Expect = 2e-15
Identities = 37/60 (61%), Positives = 41/60 (68%)
Frame = +1
Query: 508 EDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDL 687
E G FAKWR KIG PS +IQE+A VLARYA ICQ +VPIVEPEVL G HD+
Sbjct: 135 EAGARFAKWRAFFKIGATEPSVLSIQEDARVLARYAIICQENGLVPIVEPEVLTGGSHDI 194
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/41 (60%), Positives = 30/41 (73%)
Frame = +3
Query: 129 QEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTE 251
++EL K A+ I P +GILAADEST T+GKR I VENTE
Sbjct: 9 EDELIKTAKYIATPGRGILAADESTETIGKRFAGINVENTE 49
>At2g36460.1 68415.m04475 fructose-bisphosphate aldolase, putative
similar to PIR|S65073 fructose-bisphosphate aldolase (EC
4.1.2.13) isoenzyme C-1, cytosolic [Oryza sativa];
contains Pfam profile PF00274 Fructose-bisphosphate
aldolase class-I
Length = 358
Score = 95.9 bits (228), Expect = 2e-20
Identities = 46/83 (55%), Positives = 57/83 (68%)
Frame = +2
Query: 272 QLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSE 451
+LLF++ L +SGVILF ETLYQK+ DGTP V +L+ G++PGIKVDKG V L G+
Sbjct: 57 ELLFTTPGALP-CLSGVILFEETLYQKSSDGTPFVDMLKSAGVLPGIKVDKGTVELAGTN 115
Query: 452 DECTTQGLDDLAQRCAQYKRTAA 520
E TTQGLD L RC +Y A
Sbjct: 116 GETTTQGLDGLGDRCKKYYEAGA 138
Score = 84.6 bits (200), Expect = 6e-17
Identities = 40/60 (66%), Positives = 43/60 (71%)
Frame = +1
Query: 508 EDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDL 687
E G FAKWR VLKIG N PS AI ENA LARYA ICQ +VPIVEPE+L DG HD+
Sbjct: 135 EAGARFAKWRAVLKIGVNEPSQLAIHENAYGLARYAVICQENGLVPIVEPEILVDGSHDI 194
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/45 (60%), Positives = 30/45 (66%)
Frame = +3
Query: 117 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTE 251
T + +EL A I P KGILAADESTGT+GKRL I VEN E
Sbjct: 5 TSKFADELIANAAYIGTPGKGILAADESTGTIGKRLASINVENVE 49
>At3g52930.1 68416.m05834 fructose-bisphosphate aldolase, putative
similar to SP|O65735|ALF_CICAR Fructose-bisphosphate
aldolase, cytoplasmic isozyme {Cicer arietinum},
cytosolic aldolase [Fragaria x ananassa] GI:10645188;
contains Pfam profile PF00274 Fructose-bisphosphate
aldolase class-I
Length = 358
Score = 90.2 bits (214), Expect = 1e-18
Identities = 44/83 (53%), Positives = 57/83 (68%)
Frame = +2
Query: 272 QLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSE 451
+LLF++ L +SGVILF ETLYQK+ DG V +L++ G++PGIKVDKG V L G++
Sbjct: 57 ELLFTAPGALP-CLSGVILFEETLYQKSSDGKLFVDILKEGGVLPGIKVDKGTVELAGTD 115
Query: 452 DECTTQGLDDLAQRCAQYKRTAA 520
E TTQGLD L RC +Y A
Sbjct: 116 GETTTQGLDGLGDRCKKYYEAGA 138
Score = 85.0 bits (201), Expect = 4e-17
Identities = 39/60 (65%), Positives = 43/60 (71%)
Frame = +1
Query: 508 EDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDL 687
E G FAKWR VLKIG N PS +I ENA LARYA ICQ +VPIVEPE+L DG HD+
Sbjct: 135 EAGARFAKWRAVLKIGENEPSEHSIHENAYGLARYAVICQENGLVPIVEPEILVDGSHDI 194
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/45 (60%), Positives = 30/45 (66%)
Frame = +3
Query: 117 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTE 251
T + +EL A I P KGILAADESTGT+GKRL I VEN E
Sbjct: 5 TSKFADELIANAAYIGTPGKGILAADESTGTIGKRLASINVENVE 49
>At5g03690.2 68418.m00329 fructose-bisphosphate aldolase, putative
similar to PIR|S65073 fructose-bisphosphate aldolase (EC
4.1.2.13) isoenzyme C-1, cytosolic [Oryza sativa];
contains Pfam profile PF00274 Fructose-bisphosphate
aldolase class-I
Length = 359
Score = 85.4 bits (202), Expect = 3e-17
Identities = 40/60 (66%), Positives = 43/60 (71%)
Frame = +1
Query: 508 EDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDL 687
E G FAKWR VLKIG N PS AI ENA LARYA ICQ +VPIVEPE+L DG HD+
Sbjct: 135 EAGARFAKWRAVLKIGNNEPSELAIHENAYGLARYAVICQENGLVPIVEPEILVDGSHDI 194
Score = 84.6 bits (200), Expect = 6e-17
Identities = 41/83 (49%), Positives = 54/83 (65%)
Frame = +2
Query: 272 QLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSE 451
+LLF++ L + ISG+ILF ETLYQK G V ++++ G++PGIKVDKG V L G+
Sbjct: 57 ELLFTTPGAL-QYISGIILFEETLYQKTASGKLFVDVMKEAGVLPGIKVDKGTVELAGTN 115
Query: 452 DECTTQGLDDLAQRCAQYKRTAA 520
E TT GLD L RC +Y A
Sbjct: 116 GETTTTGLDGLGDRCKKYYEAGA 138
Score = 48.4 bits (110), Expect = 4e-06
Identities = 25/40 (62%), Positives = 27/40 (67%)
Frame = +3
Query: 132 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTE 251
+EL A I P KGILAADESTGT+GKR I VEN E
Sbjct: 10 DELIANAAYIGTPGKGILAADESTGTIGKRFVSINVENVE 49
>At5g03690.1 68418.m00328 fructose-bisphosphate aldolase, putative
similar to PIR|S65073 fructose-bisphosphate aldolase (EC
4.1.2.13) isoenzyme C-1, cytosolic [Oryza sativa];
contains Pfam profile PF00274 Fructose-bisphosphate
aldolase class-I
Length = 393
Score = 85.4 bits (202), Expect = 3e-17
Identities = 40/60 (66%), Positives = 43/60 (71%)
Frame = +1
Query: 508 EDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDL 687
E G FAKWR VLKIG N PS AI ENA LARYA ICQ +VPIVEPE+L DG HD+
Sbjct: 169 EAGARFAKWRAVLKIGNNEPSELAIHENAYGLARYAVICQENGLVPIVEPEILVDGSHDI 228
Score = 84.6 bits (200), Expect = 6e-17
Identities = 41/83 (49%), Positives = 54/83 (65%)
Frame = +2
Query: 272 QLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSE 451
+LLF++ L + ISG+ILF ETLYQK G V ++++ G++PGIKVDKG V L G+
Sbjct: 91 ELLFTTPGAL-QYISGIILFEETLYQKTASGKLFVDVMKEAGVLPGIKVDKGTVELAGTN 149
Query: 452 DECTTQGLDDLAQRCAQYKRTAA 520
E TT GLD L RC +Y A
Sbjct: 150 GETTTTGLDGLGDRCKKYYEAGA 172
Score = 47.6 bits (108), Expect = 8e-06
Identities = 25/39 (64%), Positives = 26/39 (66%)
Frame = +3
Query: 135 ELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTE 251
EL A I P KGILAADESTGT+GKR I VEN E
Sbjct: 45 ELIANAAYIGTPGKGILAADESTGTIGKRFVSINVENVE 83
>At2g21330.1 68415.m02538 fructose-bisphosphate aldolase, putative
strong similarity to plastidic fructose-bisphosphate
aldolase (EC 4.1.2.13) from Nicotiana paniculata
(NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057
[SP|Q40677]
Length = 399
Score = 85.4 bits (202), Expect = 3e-17
Identities = 42/74 (56%), Positives = 50/74 (67%)
Frame = +2
Query: 299 LSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLD 478
L + ISG ILF ETLYQ DG +V +L ++ I+PGIKVDKG+VPL GS DE QGLD
Sbjct: 109 LGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLVGSYDESWCQGLD 168
Query: 479 DLAQRCAQYKRTAA 520
LA R A Y + A
Sbjct: 169 GLASRTAAYYQQGA 182
Score = 64.5 bits (150), Expect = 6e-11
Identities = 32/60 (53%), Positives = 41/60 (68%)
Frame = +1
Query: 508 EDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDL 687
+ G FAKWR V+ I N PS A++E A LARYA+I Q +VPIVEPE++ DGEH +
Sbjct: 179 QQGARFAKWRTVVSIP-NGPSALAVKEAAWGLARYAAISQDSGLVPIVEPEIMLDGEHGI 237
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/40 (57%), Positives = 28/40 (70%)
Frame = +3
Query: 132 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTE 251
+EL K A+ I +P GI+A DES T GKRL IG+ENTE
Sbjct: 54 DELVKTAKTIASPGHGIMAMDESNATCGKRLASIGLENTE 93
>At2g01140.1 68415.m00023 fructose-bisphosphate aldolase, putative
similar to plastidic aldolase NPALDP1 from Nicotiana
paniculata [GI:4827251]; contains Pfam profile PF00274
Fructose-bisphosphate aldolase class-I
Length = 391
Score = 81.4 bits (192), Expect = 5e-16
Identities = 43/83 (51%), Positives = 51/83 (61%)
Frame = +2
Query: 272 QLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSE 451
QLL ++ L + ISG ILF ETLYQ DG V L I+PGIKVDKG+ PL GS
Sbjct: 93 QLLLTTPG-LGDYISGSILFEETLYQSTKDGKTFVDCLRDANIVPGIKVDKGLSPLAGSN 151
Query: 452 DECTTQGLDDLAQRCAQYKRTAA 520
+E QGLD LA R A+Y + A
Sbjct: 152 EESWCQGLDGLASRSAEYYKQGA 174
Score = 60.5 bits (140), Expect = 1e-09
Identities = 30/60 (50%), Positives = 40/60 (66%)
Frame = +1
Query: 508 EDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDL 687
+ G FAKWR V+ + PS A++E A LARYA+I Q +VPIVEPE+L DG+H +
Sbjct: 171 KQGARFAKWRTVVSVPCG-PSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPI 229
Score = 52.4 bits (120), Expect = 3e-07
Identities = 27/58 (46%), Positives = 36/58 (62%)
Frame = +3
Query: 132 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEETVVVIANCYSALTLCSP 305
+EL K A++I +P +GILA DES T GKRL IG++NTE+ Y L L +P
Sbjct: 46 DELVKTAKSIASPGRGILAIDESNATCGKRLASIGLDNTEDN----RQAYRQLLLTTP 99
>At4g38970.2 68417.m05522 fructose-bisphosphate aldolase, putative
strong similarity to plastidic fructose-bisphosphate
aldolase (EC 4.1.2.13) from Nicotiana paniculata
(NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057
[SP|Q40677]
Length = 381
Score = 81.0 bits (191), Expect = 7e-16
Identities = 38/74 (51%), Positives = 50/74 (67%)
Frame = +2
Query: 299 LSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLD 478
L + +SG ILF ETLYQ +G +V +L ++ I+PGIKVDKG+VPL GS +E QGLD
Sbjct: 108 LGQYVSGAILFEETLYQSTTEGKKMVDVLVEQNIVPGIKVDKGLVPLVGSNNESWCQGLD 167
Query: 479 DLAQRCAQYKRTAA 520
L+ R A Y + A
Sbjct: 168 GLSSRTAAYYQQGA 181
Score = 68.1 bits (159), Expect = 5e-12
Identities = 34/60 (56%), Positives = 42/60 (70%)
Frame = +1
Query: 508 EDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDL 687
+ G FAKWR V+ I N PS A++E A LARYA+I Q +VPIVEPE+L DGEHD+
Sbjct: 178 QQGARFAKWRTVVSIP-NGPSALAVKEAAWGLARYAAISQDSGLVPIVEPEILLDGEHDI 236
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/40 (60%), Positives = 29/40 (72%)
Frame = +3
Query: 132 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTE 251
+EL K A+ I +P +GILA DES T GKRL IG+ENTE
Sbjct: 53 DELVKTAKTIASPGRGILAMDESNATCGKRLDSIGLENTE 92
>At4g38970.1 68417.m05521 fructose-bisphosphate aldolase, putative
strong similarity to plastidic fructose-bisphosphate
aldolase (EC 4.1.2.13) from Nicotiana paniculata
(NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057
[SP|Q40677]
Length = 398
Score = 81.0 bits (191), Expect = 7e-16
Identities = 38/74 (51%), Positives = 50/74 (67%)
Frame = +2
Query: 299 LSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLD 478
L + +SG ILF ETLYQ +G +V +L ++ I+PGIKVDKG+VPL GS +E QGLD
Sbjct: 108 LGQYVSGAILFEETLYQSTTEGKKMVDVLVEQNIVPGIKVDKGLVPLVGSNNESWCQGLD 167
Query: 479 DLAQRCAQYKRTAA 520
L+ R A Y + A
Sbjct: 168 GLSSRTAAYYQQGA 181
Score = 68.1 bits (159), Expect = 5e-12
Identities = 34/60 (56%), Positives = 42/60 (70%)
Frame = +1
Query: 508 EDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDL 687
+ G FAKWR V+ I N PS A++E A LARYA+I Q +VPIVEPE+L DGEHD+
Sbjct: 178 QQGARFAKWRTVVSIP-NGPSALAVKEAAWGLARYAAISQDSGLVPIVEPEILLDGEHDI 236
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/40 (60%), Positives = 29/40 (72%)
Frame = +3
Query: 132 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTE 251
+EL K A+ I +P +GILA DES T GKRL IG+ENTE
Sbjct: 53 DELVKTAKTIASPGRGILAMDESNATCGKRLDSIGLENTE 92
>At1g49850.1 68414.m05589 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 250
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Frame = +1
Query: 397 HHPRHQGRQGC----RPAVRIGRRMHHPGSGRPRPALRPVQ 507
HH + GC RP R+ R HHP R RP +R VQ
Sbjct: 44 HHNQRHDSDGCDPLRRPTPRLRRFFHHPIQERSRP-IRDVQ 83
>At2g43970.2 68415.m05468 La domain-containing protein contains Pfam
profile PF05383: La domain
Length = 529
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +1
Query: 385 GEEGHHPRHQGRQGCRPAVRIGRRMHHPGSGRPRPALRPVQEDG 516
G HH H + G +P+ M PG G+ +P P DG
Sbjct: 470 GRGNHHHHHHHQVGTQPSNNPMNNMEQPGMGKQQPP-GPRMPDG 512
>At2g43970.1 68415.m05467 La domain-containing protein contains Pfam
profile PF05383: La domain
Length = 545
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +1
Query: 385 GEEGHHPRHQGRQGCRPAVRIGRRMHHPGSGRPRPALRPVQEDG 516
G HH H + G +P+ M PG G+ +P P DG
Sbjct: 486 GRGNHHHHHHHQVGTQPSNNPMNNMEQPGMGKQQPP-GPRMPDG 528
>At1g56080.1 68414.m06439 expressed protein
Length = 310
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +2
Query: 590 TPMFSPATPPSVRANASCQLSSPKSYLMAST 682
TP FSPA PS +SP+SY AS+
Sbjct: 169 TPQFSPAFTPSGTPKILSTAASPRSYSAASS 199
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 563 PPRTKLSRKTPMFSPATPPSVRANASCQLSSP 658
PP +K+S +SP PPS + + S + SP
Sbjct: 410 PPSSKMSPTVRAYSPPPPPSSKMSPSVRAYSP 441
>At3g49650.1 68416.m05426 kinesin motor protein-related several
kinesin-like proteins
Length = 813
Score = 27.9 bits (59), Expect = 6.8
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 334 RDPLPEG*RWNPSGLPAGEEGHHPRHQGRQGCRPAVRIGRRMHHPG-SGRPRPALRPVQE 510
+DP +G +W P+ EE H + RQ P + R H G G RPA R +
Sbjct: 617 QDPSSKGQQWAPTPTLCREEHHSSYYFMRQ--EPPAFVNLRKSHDGWVGGSRPASR-IDT 673
Query: 511 DGCH 522
G H
Sbjct: 674 GGNH 677
>At5g60210.1 68418.m07547 cytoplasmic linker protein-related
contains weak similarity to cytoplasmic linker protein
CLIP-170 (GI:2905649) [Gallus gallus]
Length = 588
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +3
Query: 78 KK*PTMSTYFQYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDI 233
KK P+ T + +LQEELKK I A++ K+LQ++
Sbjct: 90 KKRPSRITELELLVSQLQEELKKAKDQISVSETSKKQAEQEAEESRKQLQEV 141
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,605,279
Number of Sequences: 28952
Number of extensions: 382609
Number of successful extensions: 1281
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1277
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1477286152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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