Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30001
(340 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g50930.1 68416.m05576 AAA-type ATPase family protein contains... 29 0.79
At5g23240.1 68418.m02719 DNAJ heat shock N-terminal domain-conta... 28 1.4
At4g32620.1 68417.m04644 expressed protein predicted protein T10... 28 1.4
At5g23630.1 68418.m02771 ATPase E1-E2 type family protein / halo... 27 2.4
At3g49450.1 68416.m05405 F-box family protein contains F-box dom... 27 4.2
At2g36680.2 68415.m04500 expressed protein 27 4.2
At2g36680.1 68415.m04499 expressed protein 27 4.2
At1g73960.1 68414.m08565 expressed protein similar to TATA bindi... 26 5.6
At5g40860.1 68418.m04962 hypothetical protein 26 7.4
At4g02810.1 68417.m00381 expressed protein 26 7.4
At3g26130.1 68416.m03260 glycosyl hydrolase family 5 protein / c... 26 7.4
At2g46900.1 68415.m05857 expressed protein contains Pfam profile... 26 7.4
At1g35710.1 68414.m04439 leucine-rich repeat transmembrane prote... 26 7.4
At1g02080.1 68414.m00130 transcriptional regulator-related conta... 26 7.4
At5g18200.1 68418.m02136 expressed protein 25 9.7
At4g31430.2 68417.m04465 expressed protein 25 9.7
At4g03490.1 68417.m00476 ankyrin repeat family protein contains ... 25 9.7
At3g55370.2 68416.m06150 Dof-type zinc finger domain-containing ... 25 9.7
At3g55370.1 68416.m06149 Dof-type zinc finger domain-containing ... 25 9.7
At2g13550.1 68415.m01494 expressed protein 25 9.7
At1g72440.1 68414.m08377 CCAAT-box-binding transcription factor-... 25 9.7
At1g66950.1 68414.m07612 ABC transporter family protein similar ... 25 9.7
>At3g50930.1 68416.m05576 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 576
Score = 29.1 bits (62), Expect = 0.79
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 310 GCRSFFGFFSLPQLFLVFTFESTAKTEMFQPVD 212
G RS FG+FS ++ FE A E+F+ +
Sbjct: 94 GFRSIFGYFSSQMTIIIEEFEGFAHNEVFEAAE 126
>At5g23240.1 68418.m02719 DNAJ heat shock N-terminal
domain-containing protein low similarity to SP|O34136
Chaperone protein dnaJ (40 kDa heat shock chaperone
protein) (HSP40) {Deinococcus proteolyticus}; contains
Pfam profile PF00226: DnaJ domain
Length = 465
Score = 28.3 bits (60), Expect = 1.4
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +3
Query: 183 FWTRRNVV*PSTG*NISVFAVDSKVKTRNNCGSEKKPKKERQPKMSY 323
+W+ N PS+G N A + TR SE+KP R+ + +
Sbjct: 340 YWSPSNAALPSSGNNNGSKASSNPQVTRKTFPSEEKPTSRRENRRQF 386
>At4g32620.1 68417.m04644 expressed protein predicted protein
T10M13.8, Arabidopsis thaliana
Length = 1544
Score = 28.3 bits (60), Expect = 1.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 243 VDSKVKTRNNCGSEKKPKKERQPKM 317
V SK T N+CGS+KK +P M
Sbjct: 1302 VMSKANTPNSCGSQKKQSPTEKPAM 1326
>At5g23630.1 68418.m02771 ATPase E1-E2 type family protein /
haloacid dehalogenase-like hydrolase familiy protein
similar to SP|O14072 Cation-transporting ATPase 4 (EC
3.6.3.-) {Schizosaccharomyces pombe}; contains InterPro
accession IPR001757: ATPase, E1-E2 type; contains Pfam
profile PF00702: haloacid dehalogenase-like hydrolase
Length = 1179
Score = 27.5 bits (58), Expect = 2.4
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -1
Query: 340 PYGVSQ*LILG--CRSFFGFFSLPQLFLVFTFEST-AKTEMFQPVDGQTTFRRVQNICVQ 170
P+ V Q +G C F ++S+ LF++F FEST AK+ + D ++ Q + V
Sbjct: 201 PFFVFQVFCVGLWCLDEFWYYSVFTLFMLFMFESTMAKSRLKTLTDLRSVRVDSQTVMVY 260
Query: 169 R 167
R
Sbjct: 261 R 261
>At3g49450.1 68416.m05405 F-box family protein contains F-box domain
Pfam:PF00646
Length = 397
Score = 26.6 bits (56), Expect = 4.2
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -2
Query: 222 NLSTVRQHFDVSKIYAFNVC 163
NL V H DV K Y+F VC
Sbjct: 108 NLVVVDNHMDVPKDYSFGVC 127
>At2g36680.2 68415.m04500 expressed protein
Length = 168
Score = 26.6 bits (56), Expect = 4.2
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = -3
Query: 239 KDRNVSTCRRSDNISTCPKYMRSTFATPSPFRTQFTNQLPLATLTDVIFPGEKTGDI 69
K++ R S S P Y S +PS R Q + Q+P + PGE G I
Sbjct: 8 KEQQQGQSRPSPEASATPWYSPSLVTSPSSSRPQTSGQIP-----SHVSPGEAAGII 59
>At2g36680.1 68415.m04499 expressed protein
Length = 218
Score = 26.6 bits (56), Expect = 4.2
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = -3
Query: 239 KDRNVSTCRRSDNISTCPKYMRSTFATPSPFRTQFTNQLPLATLTDVIFPGEKTGDI 69
K++ R S S P Y S +PS R Q + Q+P + PGE G I
Sbjct: 8 KEQQQGQSRPSPEASATPWYSPSLVTSPSSSRPQTSGQIP-----SHVSPGEAAGII 59
>At1g73960.1 68414.m08565 expressed protein similar to TATA binding
protein associated factor (GI:2827282) [Homo sapiens];
similar to Transcription initiation factor TFIID 150 kDa
subunit (TAFII-150) (TAFII150) (Swiss-Prot:Q24325)
[Drosophila melanogaster]
Length = 1390
Score = 26.2 bits (55), Expect = 5.6
Identities = 13/57 (22%), Positives = 28/57 (49%)
Frame = -1
Query: 307 CRSFFGFFSLPQLFLVFTFESTAKTEMFQPVDGQTTFRRVQNICVQRLQHLRHFVRN 137
CR FG S+ + +++S A +M + G +FR++ + R + + +R+
Sbjct: 424 CRDLFGTHSIGMHGKIRSWKSGAVLQMLEKQMGSDSFRKILQKIISRAKDPSNSIRS 480
>At5g40860.1 68418.m04962 hypothetical protein
Length = 184
Score = 25.8 bits (54), Expect = 7.4
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 201 HFDVSKIYAFNVCNT-FAISYAIH*STSPGNTNRCHFSRR 85
H D+S + F V N+ F I Y + + S GNT RC S +
Sbjct: 31 HPDISLVNNFYVINSRFEIVY-VDFTPSVGNTPRCSISEK 69
>At4g02810.1 68417.m00381 expressed protein
Length = 271
Score = 25.8 bits (54), Expect = 7.4
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = -1
Query: 340 PYGVSQ*LILGCRSFFGFFSLPQLFLVFTFESTAKTEMFQPVDGQTTFRRVQNICVQRL 164
P VSQ +G SF +FS P+ + + T KT P++ ++ + +C + L
Sbjct: 13 PKQVSQNPDVGGWSFLQYFSEPKGIVQNREDDTKKTAYVYPIEKRSVAKLSLEMCTESL 71
>At3g26130.1 68416.m03260 glycosyl hydrolase family 5 protein /
cellulase family protein contains Pfam profile: PF00150
cellulase (glycosyl hydrolase family 5)
Length = 551
Score = 25.8 bits (54), Expect = 7.4
Identities = 18/60 (30%), Positives = 22/60 (36%)
Frame = -1
Query: 298 FFGFFSLPQLFLVFTFESTAKTEMFQPVDGQTTFRRVQNICVQRLQHLRHFVRNSLINFP 119
F F LP + F F + + VD RRV+ CV HL V L P
Sbjct: 6 FISVFLLPYVITTFAFPPSTDSRWI--VDDGNKGRRVKLTCVNWPSHLETAVAEGLSKQP 63
>At2g46900.1 68415.m05857 expressed protein contains Pfam profile
PF04910: Protein of unknown function, DUF654
Length = 627
Score = 25.8 bits (54), Expect = 7.4
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = -3
Query: 176 RSTFATPSPFRTQFTNQLPLATLTDVIFPGEKTGDINDVI 57
R P P N+ PLA L + I P GD D I
Sbjct: 576 RGQHQAPPPRPRDLANRSPLAVLIESILPWANFGDGEDEI 615
>At1g35710.1 68414.m04439 leucine-rich repeat transmembrane protein
kinase, putative similar to many predicted protein
kinases
Length = 1120
Score = 25.8 bits (54), Expect = 7.4
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 210 PSTG*NISVFAVDSKVK 260
P TG N+S+F+VD K K
Sbjct: 824 PETGENMSIFSVDGKFK 840
>At1g02080.1 68414.m00130 transcriptional regulator-related contains
Pfam PF04054: CCR4-Not complex component, Not1; contains
TIGRFAM TIGR01612: reticulocyte binding protein; similar
to General negative regulator of transcription subunit 1
(SP:P25655) {Saccharomyces cerevisiae}; Location of ESTs
gb|T44328 and gb|AA395265
Length = 2378
Score = 25.8 bits (54), Expect = 7.4
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 217 VDGQTTFRRVQNICVQRLQHLRHFVRNSLINFP 119
V+GQ + VQ + V LQ L F+RN+ + P
Sbjct: 2051 VNGQKGWPYVQRLLVDLLQFLEPFLRNAELGGP 2083
>At5g18200.1 68418.m02136 expressed protein
Length = 351
Score = 25.4 bits (53), Expect = 9.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 179 YILDTSKCCLTVDRLKHFCL 238
Y +T KCCL + KHF +
Sbjct: 209 YFEETGKCCLCEAKSKHFVI 228
>At4g31430.2 68417.m04465 expressed protein
Length = 574
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 129 STSPGNTNRCHFSRRKNGR 73
S+SPGNT +SRR GR
Sbjct: 541 SSSPGNTKVLAYSRRGRGR 559
>At4g03490.1 68417.m00476 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 587
Score = 25.4 bits (53), Expect = 9.7
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -2
Query: 216 STVRQHFDVSKIYAFNVCNTFAISYAI 136
S V+ ++ S +AF +CN+ A+ A+
Sbjct: 385 SNVKHSYEESAFHAFVICNSIAVYTAV 411
>At3g55370.2 68416.m06150 Dof-type zinc finger domain-containing
protein
Length = 354
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 145 RNGEGVANVERIYFGHVEMLSDRRQVET 228
R+G+GV N+ R + G++ + S R + T
Sbjct: 305 RDGDGVNNLSRNFLGNININSGRNEEYT 332
>At3g55370.1 68416.m06149 Dof-type zinc finger domain-containing
protein
Length = 323
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 145 RNGEGVANVERIYFGHVEMLSDRRQVET 228
R+G+GV N+ R + G++ + S R + T
Sbjct: 274 RDGDGVNNLSRNFLGNININSGRNEEYT 301
>At2g13550.1 68415.m01494 expressed protein
Length = 181
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 243 VDSKVKTRNNCGSEKKPKKERQPKM 317
+ S KTR+ G++ KP+ QPK+
Sbjct: 94 IASTDKTRSRSGNQSKPQPHIQPKL 118
>At1g72440.1 68414.m08377 CCAAT-box-binding transcription
factor-related similar to CCAAT-box-binding
transcription factor (CCAAT-binding factor) (CBF)
(Swiss-Prot:Q03701) [Homo sapiens], GB:P53569 [Mus
musculus]
Length = 1056
Score = 25.4 bits (53), Expect = 9.7
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 210 PSTG*NISVFAVDSKVKTRNNCGSEKKPKKERQPK 314
PS+G N + F +K KT+ KKPKK++Q K
Sbjct: 35 PSSGFNDTDFRKPAKSKTQKR----KKPKKDQQHK 65
>At1g66950.1 68414.m07612 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1454
Score = 25.4 bits (53), Expect = 9.7
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = -1
Query: 208 QTTFRRVQNICVQRLQHLRHF-VRNSLINFPW 116
QTTF RV C Q H H V SLI W
Sbjct: 933 QTTFARVSGYCEQNDIHSPHVTVYESLIYSAW 964
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,424,491
Number of Sequences: 28952
Number of extensions: 113091
Number of successful extensions: 385
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 385
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 399440640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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