Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30019
         (573 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g57380.1 68418.m07169 fibronectin type III domain-containing ...    28   3.8  
At1g68940.1 68414.m07891 armadillo/beta-catenin repeat protein-r...    28   3.8  
At5g12890.1 68418.m01479 UDP-glucoronosyl/UDP-glucosyl transfera...    28   5.1  
At1g27020.1 68414.m03294 expressed protein                             27   6.7  
At1g03080.1 68414.m00282 kinase interacting family protein simil...    27   6.7  
At1g73290.1 68414.m08481 serine carboxypeptidase S10 family prot...    27   8.9  
At1g09000.1 68414.m01004 NPK1-related protein kinase, putative (...    27   8.9  

>At5g57380.1 68418.m07169 fibronectin type III domain-containing
           protein / PHD finger protein-related contains Pfam
           profiles PF00041: Fibronectin type III domain, PF00628:
           PHD-finger
          Length = 600

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +3

Query: 414 DRDRVECCSSLEQESTIKERGLQRQRAKNRLSGDGPLREP 533
           D+D  E CS+ E ES ++E  L +++A N++ G   L  P
Sbjct: 434 DKDNTEHCSAGEVESELEEERLVKRKA-NKIDGRDLLVTP 472


>At1g68940.1 68414.m07891 armadillo/beta-catenin repeat
           protein-related / U-box domain-containing protein ;
           contains Pfam profile PF04564: U-box domain
          Length = 1033

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +1

Query: 481 NVKGRKTVYRAMAHYVNHHPNSSFL 555
           N+  R+  ++A+AH   +HPN+  L
Sbjct: 546 NIDARRAAFKALAHISLYHPNNKIL 570


>At5g12890.1 68418.m01479 UDP-glucoronosyl/UDP-glucosyl transferase
           family protein contains Pfam profile: PF00201
           UDP-glucoronosyl and UDP-glucosyl transferase
          Length = 488

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +1

Query: 436 VPVWNKSPLLKNVDSNVKGRKTVYRAMAHYVNHHPNSS 549
           VPVW   P+LK+ D  V G ++   A+  +++  P+ S
Sbjct: 248 VPVWPVGPVLKSPDKKV-GSRSTEEAVKSWLDSKPDHS 284


>At1g27020.1 68414.m03294 expressed protein
          Length = 308

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 173 WENPGVTQLNRLAAHPPFASW 235
           WE P  T  N+LA    FA+W
Sbjct: 163 WEKPTSTDFNQLAKESEFAAW 183


>At1g03080.1 68414.m00282 kinase interacting family protein similar to
            kinase interacting protein 1 (GI:13936326) [Petunia
            integrifolia]
          Length = 1744

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 9/32 (28%), Positives = 21/32 (65%)
 Frame = +3

Query: 402  IKRIDRDRVECCSSLEQESTIKERGLQRQRAK 497
            ++ +  + VE C +LE  ST+K+R +++ + +
Sbjct: 1340 LEGLTNELVEACKNLESRSTLKDREIEQLKGR 1371


>At1g73290.1 68414.m08481 serine carboxypeptidase S10 family protein
           similar to serine carboxypeptidase I precursor
           (SP:P07519) [Hordeum vulgare]; glucose acyltransferase
           GB:AAD01263 [Solanum berthaultii]; contains Pfam
           profile: PF00450 Serine carboxypeptidase;
          Length = 438

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -2

Query: 461 SGLLFQTGTTLNPISVYSFDL*GILPISAYWLK 363
           SGLLF+ G     + VY+  L  ++P +  W K
Sbjct: 91  SGLLFENGPLAMKLDVYNGTLPSLVPTTYSWTK 123


>At1g09000.1 68414.m01004 NPK1-related protein kinase, putative
           (ANP1) similar to protein kinase [Nicotiana tabacum]
           gi|456309|dbj|BAA05648; identical to cDNA NPK1-related
           protein kinase 1S GI:2342422
          Length = 666

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +3

Query: 405 KRIDRDRVECCSSLEQESTIKERGLQRQRAKNRLSGDG 518
           + ++R R E        S+ ++RG+ RQR K+R +  G
Sbjct: 628 QELERKRQEIMRQAGLGSSPRDRGMSRQREKSRFASPG 665


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,793,030
Number of Sequences: 28952
Number of extensions: 248559
Number of successful extensions: 588
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 588
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1112061928
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)