Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00028
(846 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g01610.1 68417.m00210 cathepsin B-like cysteine protease, put... 84 1e-16
At1g02305.1 68414.m00175 cathepsin B-like cysteine protease, put... 81 7e-16
At4g01610.2 68417.m00211 cathepsin B-like cysteine protease, put... 79 5e-15
At1g02300.1 68414.m00173 cathepsin B-like cysteine protease, put... 53 3e-07
At4g39090.1 68417.m05535 cysteine proteinase RD19a (RD19A) / thi... 51 8e-07
At2g21430.1 68415.m02550 cysteine proteinase A494, putative / th... 45 6e-05
At4g16190.1 68417.m02457 cysteine proteinase, putative contains ... 44 2e-04
At3g19390.1 68416.m02459 cysteine proteinase, putative / thiol p... 44 2e-04
At3g54940.3 68416.m06091 cysteine proteinase, putative contains ... 42 4e-04
At3g54940.2 68416.m06090 cysteine proteinase, putative contains ... 42 4e-04
At4g35350.2 68417.m05022 cysteine endopeptidase, papain-type (XC... 41 9e-04
At4g35350.1 68417.m05023 cysteine endopeptidase, papain-type (XC... 41 9e-04
At1g47128.1 68414.m05222 cysteine proteinase (RD21A) / thiol pro... 41 0.001
At4g23520.1 68417.m03390 cysteine proteinase, putative contains ... 40 0.002
At5g43060.1 68418.m05256 cysteine proteinase, putative / thiol p... 40 0.003
At4g36880.1 68417.m05229 cysteine proteinase, putative strong si... 39 0.004
At1g20850.1 68414.m02612 cysteine endopeptidase, papain-type (XC... 39 0.004
At5g60360.1 68418.m07568 cysteine proteinase, putative / AALP pr... 39 0.005
At3g19400.2 68416.m02460 cysteine proteinase, putative non-conse... 39 0.005
At3g19400.1 68416.m02461 cysteine proteinase, putative non-conse... 39 0.005
At4g11310.1 68417.m01827 cysteine proteinase, putative contains ... 38 0.006
At1g09850.1 68414.m01109 cysteine protease, papain-like (XBCP3) ... 38 0.006
At5g45890.1 68418.m05644 senescence-specific SAG12 protein (SAG1... 38 0.008
At4g11320.1 68417.m01828 cysteine proteinase, putative contains ... 38 0.008
At3g48350.1 68416.m05277 cysteine proteinase, putative similar t... 37 0.019
At3g43960.1 68416.m04706 cysteine proteinase, putative contains ... 36 0.026
At1g06260.1 68414.m00662 cysteine proteinase, putative contains ... 36 0.026
At5g50260.1 68418.m06224 cysteine proteinase, putative similar t... 36 0.034
At2g27420.1 68415.m03314 cysteine proteinase, putative contains ... 36 0.034
At1g29080.1 68414.m03560 peptidase C1A papain family protein con... 36 0.034
At3g45310.1 68416.m04892 cysteine proteinase, putative similar t... 35 0.078
At2g34080.1 68415.m04172 cysteine proteinase, putative contains ... 35 0.078
At3g49340.1 68416.m05394 cysteine proteinase, putative contains ... 34 0.14
At1g29090.1 68414.m03561 peptidase C1A papain family protein con... 33 0.24
At1g03560.1 68414.m00337 pentatricopeptide (PPR) repeat-containi... 31 0.96
At5g07110.1 68418.m00810 prenylated rab acceptor (PRA1) family p... 30 2.2
At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 30 2.2
At5g45800.1 68418.m05632 leucine-rich repeat transmembrane prote... 29 2.9
At4g39350.1 68417.m05570 cellulose synthase, catalytic subunit (... 28 9.0
At1g48540.2 68414.m05428 leucine-rich repeat family protein 28 9.0
At1g48540.1 68414.m05427 leucine-rich repeat family protein 28 9.0
At5g17960.1 68418.m02106 DC1 domain-containing protein contains ... 23 9.7
>At4g01610.1 68417.m00210 cathepsin B-like cysteine protease,
putative similar to cathepsin B-like cysteine proteinase
GI:609175 from [Nicotiana rustica]; contains an
unusually short, 5nt exon
Length = 359
Score = 84.2 bits (199), Expect = 1e-16
Identities = 37/81 (45%), Positives = 50/81 (61%)
Frame = +2
Query: 257 EHFATLPIKTHNFDLIASLPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAMTDRV 436
+HF +PI +H+ L LP+ FD R WP C ++ + DQG CGSCWAFGAVE+++DR
Sbjct: 87 KHFLGVPIVSHDPSL--KLPKAFDARTAWPQCTSIGNILDQGHCGSCWAFGAVESLSDRF 144
Query: 437 CTYSNGTKHFHFSAEDLLSCC 499
C + S DLL+CC
Sbjct: 145 CIQFG--MNISLSVNDLLACC 163
Score = 47.2 bits (107), Expect = 1e-05
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +1
Query: 514 GCSGGMPRLAWEYWKHFGLVSGGSYNSSQGCRPY-EIPPCEHHVPGNRMPCSGDTKTPKC 690
GC GG P AW+Y+ + G+V ++ C PY + C H PG C TPKC
Sbjct: 170 GCDGGYPIAAWQYFSYSGVV-------TEECDPYFDNTGCSH--PG----CEPAYPTPKC 216
Query: 691 TKKCESGYDVNYKQDKQYGKHVYT 762
++KC S + + + K Y YT
Sbjct: 217 SRKCVSDNKL-WSESKHYSVSTYT 239
Score = 34.3 bits (75), Expect = 0.10
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3
Query: 783 IRAELFKNGPVEGAFTVYSD 842
I AE++KNGPVE +FTVY D
Sbjct: 247 IMAEVYKNGPVEVSFTVYED 266
>At1g02305.1 68414.m00175 cathepsin B-like cysteine protease,
putative similar to cathepsin B-like cysteine proteinase
[Nicotiana rustica] GI:609175; contains Pfam profile
PF00112: Papain family cysteine protease
Length = 362
Score = 81.4 bits (192), Expect = 7e-16
Identities = 36/79 (45%), Positives = 48/79 (60%)
Frame = +2
Query: 263 FATLPIKTHNFDLIASLPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAMTDRVCT 442
F +PI +H+ L LP+ FD R W C ++ + DQG CGSCWAFGAVE+++DR C
Sbjct: 92 FLGVPIVSHDISL--KLPKEFDARTAWSQCTSIGRILDQGHCGSCWAFGAVESLSDRFCI 149
Query: 443 YSNGTKHFHFSAEDLLSCC 499
N + S DLL+CC
Sbjct: 150 KYN--MNVSLSVNDLLACC 166
Score = 55.6 bits (128), Expect = 4e-08
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +1
Query: 514 GCSGGMPRLAWEYWKHFGLVSGGSYNSSQGCRPY-EIPPCEHHVPGNRMPCSGDTKTPKC 690
GC+GG P AW Y+KH G+V ++ C PY + C H PG C TPKC
Sbjct: 173 GCNGGYPIAAWRYFKHHGVV-------TEECDPYFDNTGCSH--PG----CEPAYPTPKC 219
Query: 691 TKKCESGYDVNYKQDKQYGKHVY 759
+KC SG + +++ K YG Y
Sbjct: 220 ARKCVSGNQL-WRESKHYGVSAY 241
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +3
Query: 777 DHIRAELFKNGPVEGAFTVYSD 842
D I AE++KNGPVE AFTVY D
Sbjct: 248 DDIMAEVYKNGPVEVAFTVYED 269
>At4g01610.2 68417.m00211 cathepsin B-like cysteine protease,
putative similar to cathepsin B-like cysteine proteinase
GI:609175 from [Nicotiana rustica]; contains an
unusually short, 5nt exon
Length = 359
Score = 78.6 bits (185), Expect = 5e-15
Identities = 35/81 (43%), Positives = 48/81 (59%)
Frame = +2
Query: 257 EHFATLPIKTHNFDLIASLPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAMTDRV 436
+HF +PI +H+ L LP+ FD R WP C ++ + G CGSCWAFGAVE+++DR
Sbjct: 87 KHFLGVPIVSHDPSL--KLPKAFDARTAWPQCTSIGNILGLGHCGSCWAFGAVESLSDRF 144
Query: 437 CTYSNGTKHFHFSAEDLLSCC 499
C + S DLL+CC
Sbjct: 145 CIQFG--MNISLSVNDLLACC 163
Score = 47.2 bits (107), Expect = 1e-05
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +1
Query: 514 GCSGGMPRLAWEYWKHFGLVSGGSYNSSQGCRPY-EIPPCEHHVPGNRMPCSGDTKTPKC 690
GC GG P AW+Y+ + G+V ++ C PY + C H PG C TPKC
Sbjct: 170 GCDGGYPIAAWQYFSYSGVV-------TEECDPYFDNTGCSH--PG----CEPAYPTPKC 216
Query: 691 TKKCESGYDVNYKQDKQYGKHVYT 762
++KC S + + + K Y YT
Sbjct: 217 SRKCVSDNKL-WSESKHYSVSTYT 239
Score = 34.3 bits (75), Expect = 0.10
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3
Query: 783 IRAELFKNGPVEGAFTVYSD 842
I AE++KNGPVE +FTVY D
Sbjct: 247 IMAEVYKNGPVEVSFTVYED 266
>At1g02300.1 68414.m00173 cathepsin B-like cysteine protease,
putative similar to cathepsin B-like cysteine proteinase
GI:609175 from [Nicotiana rustica]
Length = 379
Score = 52.8 bits (121), Expect = 3e-07
Identities = 33/96 (34%), Positives = 45/96 (46%), Gaps = 20/96 (20%)
Frame = +2
Query: 272 LPIKTHNFDLIASLPENFDPRDKWPDCPTLNEVRDQ--------------------GSCG 391
+PI H DL LP+ FD R W C ++ + G CG
Sbjct: 92 VPIVRH--DLSLKLPKEFDARTAWSHCTSIRRILVGYILNNVLLWSTITLWFWFLLGHCG 149
Query: 392 SCWAFGAVEAMTDRVCTYSNGTKHFHFSAEDLLSCC 499
SCWAFGAVE+++DR C N + SA D+++CC
Sbjct: 150 SCWAFGAVESLSDRFCIKYN--LNVSLSANDVIACC 183
Score = 48.0 bits (109), Expect = 8e-06
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +1
Query: 514 GCSGGMPRLAWEYWKHFGLVSGGSYNSSQGCRPY-EIPPCEHHVPGNRMPCSGDTKTPKC 690
GC+GG P AW Y+K+ G+V +Q C PY + C H PG C TPKC
Sbjct: 190 GCNGGFPMGAWLYFKYHGVV-------TQECDPYFDNTGCSH--PG----CEPTYPTPKC 236
Query: 691 TKKCESGYDVNYKQDKQYGKHVY 759
+KC S + + + K YG Y
Sbjct: 237 ERKCVSRNQL-WGESKHYGVGAY 258
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +3
Query: 762 LSGDEDHIRAELFKNGPVEGAFTVYSD 842
++ D I AE++KNGPVE AFTVY D
Sbjct: 260 INPDPQDIMAEVYKNGPVEVAFTVYED 286
>At4g39090.1 68417.m05535 cysteine proteinase RD19a (RD19A) / thiol
protease identical to cysteine proteinase RD19a, thiol
protease SP:P43296, GI:435618 from [Arabidopsis
thaliana]
Length = 368
Score = 51.2 bits (117), Expect = 8e-07
Identities = 27/75 (36%), Positives = 39/75 (52%)
Frame = +2
Query: 308 SLPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAMTDRVCTYSNGTKHFHFSAEDL 487
+LPE+FD W D + V++QGSCGSCW+F A A+ + K S + L
Sbjct: 134 NLPEDFD----WRDHGAVTPVKNQGSCGSCWSFSATGALEG--ANFLATGKLVSLSEQQL 187
Query: 488 LSCCPICDWDAAEEC 532
+ C CD + A+ C
Sbjct: 188 VDCDHECDPEEADSC 202
>At2g21430.1 68415.m02550 cysteine proteinase A494, putative / thiol
protease, putative identical to SP:P43295 Probable
cysteine proteinase A494 precursor [Arabidopsis
thaliana]; strong similarity to cysteine proteinase
RD19A (thiol protease) GI:435618, SP:P43296 from
[Arabidopsis thaliana]
Length = 361
Score = 45.2 bits (102), Expect = 6e-05
Identities = 26/75 (34%), Positives = 37/75 (49%)
Frame = +2
Query: 308 SLPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAMTDRVCTYSNGTKHFHFSAEDL 487
+LPE FD W D + V++QGSCGSCW+F A+ + + G K S + L
Sbjct: 131 NLPEEFD----WRDRGAVTPVKNQGSCGSCWSFSTTGAL-EGAHFLATG-KLVSLSEQQL 184
Query: 488 LSCCPICDWDAAEEC 532
+ C CD + C
Sbjct: 185 VDCDHECDPEEEGSC 199
>At4g16190.1 68417.m02457 cysteine proteinase, putative contains
similarity to papain-like cysteine proteinase isoform I
GI:7381219 from [Ipomoea batatas]
Length = 373
Score = 43.6 bits (98), Expect = 2e-04
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Frame = +2
Query: 272 LPIKTHNFDLI--ASLPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAMTDRVCTY 445
LP T ++ + LP FD W + + V++QG CGSCW+F A+ A+ +
Sbjct: 125 LPTDTQTAPILPTSDLPTEFD----WREQGAVTPVKNQGMCGSCWSFSAIGALEG---AH 177
Query: 446 SNGTKHF-HFSAEDLLSCCPICDWDAAEEC 532
TK S + L+ C CD A C
Sbjct: 178 FLATKELVSLSEQQLVDCDHECDPAQANSC 207
>At3g19390.1 68416.m02459 cysteine proteinase, putative / thiol
protease, putative contains similarity to cysteine
proteinase RD21A (thiol protease) GI:435619, SP:P43297
from [Arabidopsis thaliana]
Length = 452
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/39 (53%), Positives = 26/39 (66%)
Frame = +2
Query: 308 SLPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAM 424
SLP+ D R K +N V+DQGSCGSCWAF A+ A+
Sbjct: 128 SLPDAIDWRAKG----AVNPVKDQGSCGSCWAFSAIGAV 162
>At3g54940.3 68416.m06091 cysteine proteinase, putative contains
similarity to cysteine proteinase GI:479060 from
[Glycine max]
Length = 368
Score = 42.3 bits (95), Expect = 4e-04
Identities = 25/65 (38%), Positives = 35/65 (53%)
Frame = +2
Query: 302 IASLPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAMTDRVCTYSNGTKHFHFSAE 481
+ LPE+FD R+K + EV++QG+CGSCWAF A + S G K S +
Sbjct: 134 VDGLPEDFDWREKGG----VTEVKNQGACGSCWAFSTTGA-AEGAHFVSTG-KLLSLSEQ 187
Query: 482 DLLSC 496
L+ C
Sbjct: 188 QLVDC 192
>At3g54940.2 68416.m06090 cysteine proteinase, putative contains
similarity to cysteine proteinase GI:479060 from
[Glycine max]
Length = 211
Score = 42.3 bits (95), Expect = 4e-04
Identities = 25/65 (38%), Positives = 35/65 (53%)
Frame = +2
Query: 302 IASLPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAMTDRVCTYSNGTKHFHFSAE 481
+ LPE+FD R+K + EV++QG+CGSCWAF A + S G K S +
Sbjct: 134 VDGLPEDFDWREKGG----VTEVKNQGACGSCWAFSTTGA-AEGAHFVSTG-KLLSLSEQ 187
Query: 482 DLLSC 496
L+ C
Sbjct: 188 QLVDC 192
>At4g35350.2 68417.m05022 cysteine endopeptidase, papain-type (XCP1)
identical to papain-type cysteine endopeptidase XCP1
GI:6708181 from [Arabidopsis thaliana]
Length = 288
Score = 41.1 bits (92), Expect = 9e-04
Identities = 24/65 (36%), Positives = 34/65 (52%)
Frame = +2
Query: 302 IASLPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAMTDRVCTYSNGTKHFHFSAE 481
I LP++ D R K P V+DQG CGSCWAF V A+ + + + G S +
Sbjct: 134 ITDLPKSVDWRKKGAVAP----VKDQGQCGSCWAFSTVAAV-EGINQITTGNLS-SLSEQ 187
Query: 482 DLLSC 496
+L+ C
Sbjct: 188 ELIDC 192
>At4g35350.1 68417.m05023 cysteine endopeptidase, papain-type (XCP1)
identical to papain-type cysteine endopeptidase XCP1
GI:6708181 from [Arabidopsis thaliana]
Length = 355
Score = 41.1 bits (92), Expect = 9e-04
Identities = 24/65 (36%), Positives = 34/65 (52%)
Frame = +2
Query: 302 IASLPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAMTDRVCTYSNGTKHFHFSAE 481
I LP++ D R K P V+DQG CGSCWAF V A+ + + + G S +
Sbjct: 134 ITDLPKSVDWRKKGAVAP----VKDQGQCGSCWAFSTVAAV-EGINQITTGNLS-SLSEQ 187
Query: 482 DLLSC 496
+L+ C
Sbjct: 188 ELIDC 192
>At1g47128.1 68414.m05222 cysteine proteinase (RD21A) / thiol
protease identical to SP|P43297 Cysteine proteinase
RD21A precursor (EC 3.4.22.-) {Arabidopsis thaliana},
thiol protease RD21A SP:P43297 from [Arabidopsis
thaliana]
Length = 462
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = +2
Query: 311 LPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAM 424
LPE+ D R K + EV+DQG CGSCWAF + A+
Sbjct: 137 LPESIDWRKKG----AVAEVKDQGGCGSCWAFSTIGAV 170
>At4g23520.1 68417.m03390 cysteine proteinase, putative contains
similarity to cysteine proteinase (thiol protease) RD21A
GI:435619, SP:P43297 from [Arabidopsis thaliana]
Length = 356
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +2
Query: 311 LPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAM 424
LPE+ D W ++E++DQG+C SCWAF V A+
Sbjct: 133 LPESVD----WRQEGAVSEIKDQGTCNSCWAFSTVAAV 166
>At5g43060.1 68418.m05256 cysteine proteinase, putative / thiol
protease, putative similar to cysteine proteinase RD21A
precursor (thiol protease) GI:435619, SP:P43297 from
[Arabidopsis thaliana]
Length = 463
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +2
Query: 308 SLPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAM 424
+LP++ D W + +V+DQGSCGSCWAF + A+
Sbjct: 137 ALPDSVD----WRKEGAVADVKDQGSCGSCWAFSTIGAV 171
>At4g36880.1 68417.m05229 cysteine proteinase, putative strong
similarity to cysteine proteinase COT44 precursor
SP:P25251 from [Brassica napus] (Rape)
Length = 376
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +2
Query: 311 LPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAM 424
+PE D R K +N ++DQG+CGSCWAF A+
Sbjct: 145 VPETVDWRQKG----AVNPIKDQGTCGSCWAFSTTAAV 178
>At1g20850.1 68414.m02612 cysteine endopeptidase, papain-type (XCP2)
identical to papain-type cysteine endopeptidase XCP2
GI:6708183 from [Arabidopsis thaliana]
Length = 356
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/41 (43%), Positives = 27/41 (65%)
Frame = +2
Query: 302 IASLPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAM 424
+ ++P++ D R K + EV++QGSCGSCWAF V A+
Sbjct: 135 VEAVPKSVDWRKKG----AVAEVKNQGSCGSCWAFSTVAAV 171
>At5g60360.1 68418.m07568 cysteine proteinase, putative / AALP
protein (AALP) identical to AALP protein GI:7230640 from
[Arabidopsis thaliana]; similar to barley aleurain
Length = 358
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Frame = +2
Query: 305 ASLPENFDPRDKWPDCPTLNEVRDQGSCGSCWAF---GAVEA 421
A+LPE D W + ++ V+DQG CGSCW F GA+EA
Sbjct: 139 AALPETKD----WREDGIVSPVKDQGGCGSCWTFSTTGALEA 176
>At3g19400.2 68416.m02460 cysteine proteinase, putative
non-consensus AT acceptor site at exon 3; contains
similarity to cysteine protease CYP1 GI:2828252, TDI-65
GI:5726641 from [Lycopersicon esculentum]
Length = 290
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +2
Query: 311 LPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAMTDRVCTYSNGTKHFHFSAEDLL 490
LP+ D W + V+DQG+CGSCWAF AV A+ + + + G + S ++L+
Sbjct: 130 LPDEVD----WRANGAVVSVKDQGNCGSCWAFSAVGAV-EGINQITTG-ELISLSEQELV 183
Query: 491 SC 496
C
Sbjct: 184 DC 185
>At3g19400.1 68416.m02461 cysteine proteinase, putative
non-consensus AT acceptor site at exon 3; contains
similarity to cysteine protease CYP1 GI:2828252, TDI-65
GI:5726641 from [Lycopersicon esculentum]
Length = 362
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +2
Query: 311 LPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAMTDRVCTYSNGTKHFHFSAEDLL 490
LP+ D W + V+DQG+CGSCWAF AV A+ + + + G + S ++L+
Sbjct: 130 LPDEVD----WRANGAVVSVKDQGNCGSCWAFSAVGAV-EGINQITTG-ELISLSEQELV 183
Query: 491 SC 496
C
Sbjct: 184 DC 185
>At4g11310.1 68417.m01827 cysteine proteinase, putative contains
similarity to cysteine proteinase RD21A (thiol protease)
GI:435619, SP:P43297 from [Arabidopsis thaliana]
Length = 364
Score = 38.3 bits (85), Expect = 0.006
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +2
Query: 311 LPENFDPRDKWPDCPTLNEVRDQGSCGSCWAF---GAVEAMTDRVCTYSNGTKHFHFSAE 481
LP++ D W + + EV+DQG C SCWAF GAVE + +++ T T S +
Sbjct: 137 LPKSVD----WRNEGAVTEVKDQGHCRSCWAFSTVGAVEGL-NKIVTGELVT----LSEQ 187
Query: 482 DLLSC 496
DL++C
Sbjct: 188 DLINC 192
>At1g09850.1 68414.m01109 cysteine protease, papain-like (XBCP3)
identical to papain-like cysteine peptidase XBCP3
GI:14600257 from [Arabidopsis thaliana]; contains Pfam
profiles PF00112: Papain family cysteine protease and
PF00396: Granulin
Length = 437
Score = 38.3 bits (85), Expect = 0.006
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 341 WPDCPTLNEVRDQGSCGSCWAFGAVEAM 424
W + V+DQGSCG+CW+F A AM
Sbjct: 124 WRKKGAVTNVKDQGSCGACWSFSATGAM 151
>At5g45890.1 68418.m05644 senescence-specific SAG12 protein (SAG12)
/ cysteine proteinase, putative identical to
senescence-specific protein SAG12 GI:1046373 from
[Arabidopsis thaliana]
Length = 346
Score = 37.9 bits (84), Expect = 0.008
Identities = 23/63 (36%), Positives = 31/63 (49%)
Frame = +2
Query: 308 SLPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAMTDRVCTYSNGTKHFHFSAEDL 487
+LP + D R K P +++QGSCG CWAF AV A+ T K S + L
Sbjct: 129 ALPVSVDWRKKGAVTP----IKNQGSCGCCWAFSAVAAIEG--ATQIKKGKLISLSEQQL 182
Query: 488 LSC 496
+ C
Sbjct: 183 VDC 185
>At4g11320.1 68417.m01828 cysteine proteinase, putative contains
similarity to cysteine proteinase RD21A (thiol protease)
GI:435619, SP:P43297 from [Arabidopsis thaliana]
Length = 371
Score = 37.9 bits (84), Expect = 0.008
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +2
Query: 311 LPENFDPRDKWPDCPTLNEVRDQGSCGSCWAF---GAVEAMTDRVCTYSNGTKHFHFSAE 481
LP++ D W + + EV+DQG C SCWAF GAVE + +++ T T S +
Sbjct: 144 LPKSVD----WRNEGAVTEVKDQGLCRSCWAFSTVGAVEGL-NKIVTGELVT----LSEQ 194
Query: 482 DLLSC 496
DL++C
Sbjct: 195 DLINC 199
>At3g48350.1 68416.m05277 cysteine proteinase, putative similar to
cysteine endopeptidase precursor [Ricinus communis]
GI:2944446; contains Pfam profile PF00112: Papain family
cysteine protease
Length = 364
Score = 36.7 bits (81), Expect = 0.019
Identities = 21/68 (30%), Positives = 35/68 (51%)
Frame = +2
Query: 293 FDLIASLPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAMTDRVCTYSNGTKHFHF 472
++ + +P + D R+K + EV++Q CGSCWAF V A+ +N K
Sbjct: 120 YENVTRVPSSVDWREKG----AVTEVKNQQDCGSCWAFSTVAAVEGINKIRTN--KLVSL 173
Query: 473 SAEDLLSC 496
S ++L+ C
Sbjct: 174 SEQELVDC 181
>At3g43960.1 68416.m04706 cysteine proteinase, putative contains
similarity to cysteine proteinase RD21A (thiol protease)
GI:435619, SP:P43297 from [Arabidopsis thaliana]
Length = 376
Score = 36.3 bits (80), Expect = 0.026
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +2
Query: 311 LPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAMTDRVCTYSNGTKHFHFSAEDLL 490
LP+ D R++ P V+ QG CGSCWAF A A+ + + + G + S ++L+
Sbjct: 127 LPDEVDWRERGAVVP---RVKRQGECGSCWAFAATGAV-EGINQITTG-ELVSLSEQELI 181
Query: 491 SC 496
C
Sbjct: 182 DC 183
>At1g06260.1 68414.m00662 cysteine proteinase, putative contains
similarity to thiol-protease, pre-pro-TPE4A protein
GI:3688528 [Pisum sativum]
Length = 343
Score = 36.3 bits (80), Expect = 0.026
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 341 WPDCPTLNEVRDQGSCGSCWAFGAVEAM 424
W + +R+QG CG CWAF AV A+
Sbjct: 133 WRTQGAVTPIRNQGKCGGCWAFSAVAAI 160
>At5g50260.1 68418.m06224 cysteine proteinase, putative similar to
cysteine endopeptidase precursor CysEP GI:2944446 from
[Ricinus communis]
Length = 361
Score = 35.9 bits (79), Expect = 0.034
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +2
Query: 281 KTHNFDLIASLPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAM 424
K+ + + +LP + D W + V++QG CGSCWAF V A+
Sbjct: 116 KSFMYANVNTLPTSVD----WRKNGAVTPVKNQGQCGSCWAFSTVVAV 159
>At2g27420.1 68415.m03314 cysteine proteinase, putative contains
similarity to cysteine protease SPCP1 GI:13491750 from
[Ipomoea batatas]
Length = 348
Score = 35.9 bits (79), Expect = 0.034
Identities = 24/76 (31%), Positives = 37/76 (48%)
Frame = +2
Query: 308 SLPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAMTDRVCTYSNGTKHFHFSAEDL 487
++ +N + D W + V+ QG CG CWAF AV A+ + + + G + S + L
Sbjct: 124 NVSDNGESMD-WRQEGAVTPVKYQGRCGGCWAFSAVAAV-EGITKITKG-ELVSLSEQQL 180
Query: 488 LSCCPICDWDAAEECR 535
L CD D + CR
Sbjct: 181 LD----CDRDYNQGCR 192
>At1g29080.1 68414.m03560 peptidase C1A papain family protein
contains similarity to cysteine protease SPCP1
GI:13491750 from [Ipomoea batatas]; contains Pfam
profile PF00112: Papain family cysteine protease
Length = 346
Score = 35.9 bits (79), Expect = 0.034
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +2
Query: 341 WPDCPTLNEVRDQGSCGSCWAFGAVEAMTDRVCTYSNGTKHFHFSAEDLLSC 496
W + + V+ QG CG CWAF A+ A+ + + + G S + LL C
Sbjct: 136 WRNEGAVTPVKSQGECGGCWAFSAIAAV-EGLTKIARGNL-ISLSEQQLLDC 185
>At3g45310.1 68416.m04892 cysteine proteinase, putative similar to
AALP protein GI:7230640 from [Arabidopsis thaliana] and
barley aleurain
Length = 358
Score = 34.7 bits (76), Expect = 0.078
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
Frame = +2
Query: 326 DPRDKWPDCPTLNEVRDQGSCGSCWAF---GAVEA 421
D +D W + ++ V++QG CGSCW F GA+EA
Sbjct: 143 DTKD-WREDGIVSPVKEQGHCGSCWTFSTTGALEA 176
>At2g34080.1 68415.m04172 cysteine proteinase, putative contains
similarity to cysteine protease SPCP1 GI:13491750 from
[Ipomoea batatas]
Length = 345
Score = 34.7 bits (76), Expect = 0.078
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = +2
Query: 341 WPDCPTLNEVRDQGSCGSCWAFGAVEAMTDRVCTYSNGTKHFHFSAEDLLSC 496
W + V+ QG CG CWAF AV A+ + V + G S + LL C
Sbjct: 136 WRAEGAVTPVKYQGQCGCCWAFSAVAAV-EGVAKIAGGNL-VSLSEQQLLDC 185
>At3g49340.1 68416.m05394 cysteine proteinase, putative contains
PS00640: Eukaryotic thiol (cysteine) proteases
asparagine active site; similar to cysteine proteinase
GI:535454 from [Alnus glutinosam]
Length = 341
Score = 33.9 bits (74), Expect = 0.14
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +2
Query: 341 WPDCPTLNEVRDQGSCGSCWAFGAVEAMTDRVCTYSNGTKHFHFSAEDLLSC 496
W + V+ Q CG CWAF AV A+ + + +NG + S + LL C
Sbjct: 133 WIQEGAVTSVKHQQQCGCCWAFSAVAAV-EGMTKIANG-ELVSLSEQQLLDC 182
>At1g29090.1 68414.m03561 peptidase C1A papain family protein
contains similarity to cysteine protease SPCP1
GI:13491750 from [Ipomoea batatas]; contains Pfam
profile PF00112: Papain family cysteine protease
Length = 355
Score = 33.1 bits (72), Expect = 0.24
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +2
Query: 368 VRDQGSCGSCWAFGAVEAMTDRVCTYSNGTKHFHFSAEDLLSC 496
V+ QG CG CWAF +V A+ T G S + LL C
Sbjct: 154 VKYQGQCGCCWAFSSVAAVEG--LTKIVGNNLVSLSEQQLLDC 194
>At1g03560.1 68414.m00337 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 660
Score = 31.1 bits (67), Expect = 0.96
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +3
Query: 42 CYNRKTKKMFISRAAYVTLVCVLAAAKDL 128
C++RK KK + YV+LV VLA AKD+
Sbjct: 140 CWSRKQKKYTHNLECYVSLVDVLALAKDV 168
>At5g07110.1 68418.m00810 prenylated rab acceptor (PRA1) family
protein weak similarity to prenylated Rab acceptor 1
(PRA1) [Homo sapiens] GI:4877285; contains Pfam profile
PF03208: Prenylated rab acceptor (PRA1)
Length = 216
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +3
Query: 21 PSIRKKVCYNRKTKKMFISRAAYVTLVCVLAAAKDLPHPLS 143
PS+ + RK F RA Y+TLV +L AA L HP +
Sbjct: 60 PSLSEATSRVRKNFSYF--RANYITLVAILLAASLLTHPFA 98
>At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein
contains Pfam PF01422: NF-X1 type zinc finger; similar
to transcriptional repressor NF-X1 (SP:Q12986) [Homo
sapiens]; similar to EST gb|T21002
Length = 1188
Score = 29.9 bits (64), Expect = 2.2
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +1
Query: 604 CRPYEIPPCEHHVPGNRMPCSGDTKTPKCTKK 699
C P PPC+ P PC T +C+++
Sbjct: 343 CHPGPCPPCKAFAPPRSCPCGKKMVTTRCSER 374
>At5g45800.1 68418.m05632 leucine-rich repeat transmembrane protein
kinase, putative
Length = 666
Score = 29.5 bits (63), Expect = 2.9
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 7/128 (5%)
Frame = -3
Query: 421 SFDGTESPTTATRPLISDFIQRWTVRPFVSGIEVFRQTGD*IEVMS-LYWQGRKM--FIS 251
SF ++S +T + P +DF Q TV +VSG + + V++ + RK+ +S
Sbjct: 13 SFSHSDSSSTVSCPNGTDFHQLTTVFRYVSGFNSSWFSSNCSAVITHVVLPSRKLNGTVS 72
Query: 250 ITPIIFLRCAN--DVSRGKLRPAFQLFCFRL--IVLMNSSESGCGKSLAAARTHTSVTYA 83
PI L D+S L + + + + +V +N S + G S+ + SV A
Sbjct: 73 WNPIRNLTRLRVLDLSNNSLDGSLPTWLWSMPGLVSVNLSRNRFGGSIRVIPVNGSVLSA 132
Query: 82 AREINIFF 59
+E+N+ F
Sbjct: 133 VKELNLSF 140
>At4g39350.1 68417.m05570 cellulose synthase, catalytic subunit
(Ath-A) identical to gi:2827141
Length = 1084
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 742 YGKHVYTCPETKTTSARNCSRMVPSKVLSQY 834
YG VY P T +++ MVP K +++Y
Sbjct: 175 YGNRVYPAPFTDSSAPPQARSMVPQKDIAEY 205
>At1g48540.2 68414.m05428 leucine-rich repeat family protein
Length = 1051
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -3
Query: 682 ESSCHRYRASCCRVRDVHTEGSRKVCNLD 596
E SC+R + CR+ +H+E N D
Sbjct: 357 EGSCNRKKKKICRLASIHSEAESTYVNSD 385
>At1g48540.1 68414.m05427 leucine-rich repeat family protein
Length = 1063
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -3
Query: 682 ESSCHRYRASCCRVRDVHTEGSRKVCNLD 596
E SC+R + CR+ +H+E N D
Sbjct: 357 EGSCNRKKKKICRLASIHSEAESTYVNSD 385
>At5g17960.1 68418.m02106 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 599
Score = 23.4 bits (48), Expect(2) = 9.7
Identities = 11/43 (25%), Positives = 20/43 (46%)
Frame = +1
Query: 610 PYEIPPCEHHVPGNRMPCSGDTKTPKCTKKCESGYDVNYKQDK 738
P+ C+ + NR+ CS + C + +++YK DK
Sbjct: 449 PFRCNGCKRGLTKNRLQCSTLCEYSICYECATIPSELHYKYDK 491
Score = 22.6 bits (46), Expect(2) = 9.7
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 757 YTCPETKTTSARNC 798
YTC E TT RNC
Sbjct: 522 YTCNECCTTIHRNC 535
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,218,408
Number of Sequences: 28952
Number of extensions: 421412
Number of successful extensions: 1190
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1183
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1960634400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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