Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10a16f
(656 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60900.1 68418.m07640 lectin protein kinase family protein co... 34 0.096
At4g26690.1 68417.m03846 glycerophosphoryl diester phosphodieste... 32 0.39
At2g26890.1 68415.m03226 DNAJ heat shock N-terminal domain-conta... 30 1.6
At1g66970.1 68414.m07615 glycerophosphoryl diester phosphodieste... 30 1.6
At2g27110.2 68415.m03258 far-red impaired responsive protein, pu... 29 2.7
At2g27110.1 68415.m03257 far-red impaired responsive protein, pu... 29 2.7
At5g65683.1 68418.m08265 zinc finger (C3HC4-type RING finger) fa... 29 3.6
At1g69440.1 68414.m07979 PAZ domain-containing protein / piwi do... 29 3.6
At5g66960.1 68418.m08442 prolyl oligopeptidase family protein si... 28 6.3
At5g10910.1 68418.m01266 mraW methylase family protein contains ... 28 6.3
At4g31877.1 68417.m04530 expressed protein 28 6.3
At2g35930.1 68415.m04410 U-box domain-containing protein similar... 28 6.3
At3g52450.1 68416.m05768 U-box domain-containing protein similar... 27 8.3
At1g04960.1 68414.m00494 expressed protein 27 8.3
>At5g60900.1 68418.m07640 lectin protein kinase family protein
contains Pfam domains, PF01453: Lectin (probable mannose
binding) and PF00069: Protein kinase domain
Length = 748
Score = 33.9 bits (74), Expect = 0.096
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = -3
Query: 237 DHVILLGDLLDVLKHGRLEDMVKQ----LHDAKLLHLHVKVYHWFLGEDH 100
D+VIL+ D + GRLED+ + ++D + + +VK+ W + E+H
Sbjct: 653 DNVILINWAYDCFRQGRLEDLTEDDSEAMNDMETVERYVKIAIWCIQEEH 702
>At4g26690.1 68417.m03846 glycerophosphoryl diester
phosphodiesterase family protein weak similarity to
glycerophosphodiester phosphodiesterase [Borrelia
hermsii] GI:1399038; contains Pfam profile PF03009:
Glycerophosphoryl diester phosphodiesterase family
Length = 759
Score = 31.9 bits (69), Expect = 0.39
Identities = 32/135 (23%), Positives = 61/135 (45%), Gaps = 16/135 (11%)
Frame = +3
Query: 240 LEDMVKQTMFEDIKEIAKEYNIEKSCDKYMNVDVVKQFME---MYKMGMLPRGETFVHTN 410
L D KQ+ +E + ++ E NI D ++ +K+F + + K+ + P ++F+ T
Sbjct: 544 LVDFKKQSQYETVYKV--EENIRDILDSA--IEDIKKFADAVVIQKLSVFPVAQSFITTQ 599
Query: 411 --------ELQMEEAVKVFRVLYYAKDFDVFMRTACWMRERI-----NGGMFVYAFTAAC 551
+ Q+ V++F+ + ++ +D F + I NG + + FTAA
Sbjct: 600 TNVVEKLQKSQLPVYVELFQNEFLSQPYDFFADATVEINSYITGAGINGTITEFPFTAAR 659
Query: 552 FHRTDCKGLYLPAPY 596
+ R C G PY
Sbjct: 660 YKRNLCLGRKETIPY 674
>At2g26890.1 68415.m03226 DNAJ heat shock N-terminal domain-containing
protein contains Pfam profile PF00226: DnaJ domain
Length = 2554
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = -1
Query: 587 GQVETLAVGSVEAR--GSKSVDEHASVDPFSHPARSPHENIEV 465
G+ ET++ G V+A GS V+E S DP S P ++P E + +
Sbjct: 2332 GRRETMSSGEVKAEEIGSDGVNE--STDPSSLPGQTPQERVRL 2372
>At1g66970.1 68414.m07615 glycerophosphoryl diester
phosphodiesterase family protein contains Pfam PF03009 :
Glycerophosphoryl diester phosphodiesterase family
Length = 763
Score = 29.9 bits (64), Expect = 1.6
Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 12/131 (9%)
Frame = +3
Query: 240 LEDMVKQTMFEDIKEIAKEY-NIEKSC----DKYMNVDVVKQFMEMYKMGMLPRGETFV- 401
L D KQ+ +E + +I + NI S K+ N V+ + G+T V
Sbjct: 551 LVDFKKQSKYETVYKIEETIGNIRDSAIEDIKKFANAVVINKDSVFPNSDSFLTGQTNVV 610
Query: 402 -HTNELQMEEAVKVFRVLYYAKDFDVFMRTACWMRERI-----NGGMFVYAFTAACFHRT 563
+ Q+ V++FR + ++ +D F + I NG + + FTAA + R
Sbjct: 611 ERLQKSQLPVYVELFRNEFVSQAYDFFSDATVEINAYIYGAGINGTITEFPFTAARYKRN 670
Query: 564 DCKGLYLPAPY 596
C G PY
Sbjct: 671 RCLGREEVPPY 681
>At2g27110.2 68415.m03258 far-red impaired responsive protein,
putative similar to far-red impaired response protein
FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282
Length = 851
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +3
Query: 390 ETFVHT-NELQMEEAVKVFRVLYYAKDFDVFMRTACWMRERIN 515
ETF HT N ++ + FRV + D ++ T C+ R N
Sbjct: 495 ETFAHTANRIEDDGTTSTFRVANFENDNKAYIVTFCYPEMRAN 537
>At2g27110.1 68415.m03257 far-red impaired responsive protein,
putative similar to far-red impaired response protein
FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282
Length = 851
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +3
Query: 390 ETFVHT-NELQMEEAVKVFRVLYYAKDFDVFMRTACWMRERIN 515
ETF HT N ++ + FRV + D ++ T C+ R N
Sbjct: 495 ETFAHTANRIEDDGTTSTFRVANFENDNKAYIVTFCYPEMRAN 537
>At5g65683.1 68418.m08265 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profiles PF00097: Zinc
finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 717
Score = 28.7 bits (61), Expect = 3.6
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = -1
Query: 626 AVNEEVGIDLVRSGQVETLAVGSVEARGSKSVDEHASVDPFS-HPARSPHENIEVLSVVE 450
AVN G D +R ++ + G ++ + DE + P S + HE+ E VE
Sbjct: 197 AVNNNFGSDPIRRPEIREIKTG--KSLRVYNDDEPLAYSPVSLAQINTIHESDEN-DDVE 253
Query: 449 DSEDFDGFF 423
D +DF GFF
Sbjct: 254 DDDDFPGFF 262
>At1g69440.1 68414.m07979 PAZ domain-containing protein / piwi
domain-containing protein similar to SP|Q9XGW1 PINHEAD
protein (ZWILLE protein) {Arabidopsis thaliana};
contains Pfam profiles PF02171: Piwi domain, PF02170:
PAZ domain
Length = 990
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -2
Query: 331 FMYLSQLFSMLYSLAISLMSSNMVCLTISSSRPCYTP 221
++ L F Y I N+ CL IS +RPCY P
Sbjct: 442 YLRLMSYFKDHYGYEIQF--KNLPCLQISRARPCYLP 476
>At5g66960.1 68418.m08442 prolyl oligopeptidase family protein
similar to OpdB [Treponema denticola] GI:13786054;
contains Pfam profiles PF00326: prolyl oligopeptidase
family, PF02897: Prolyl oligopeptidase, N-terminal
beta-propeller domain
Length = 792
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -3
Query: 336 RHSCTCRNFS-RCYTPWRSP*CPQTWSA*PYPP 241
RH+C R RCY P +SP P A P PP
Sbjct: 11 RHNCRFRRQQCRCYKPPKSPPPPPPPPALPKPP 43
>At5g10910.1 68418.m01266 mraW methylase family protein contains
Pfam profile PF01795: MraW methylase family
Length = 434
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Frame = -3
Query: 243 PADHV-ILLGDLLDVLKHGRLEDMVKQL-----HDAKLLHLHVKVYHWFLGEDHRPVA 88
P+ HV ++LG++LD+ RL V H + ++ H ++ + F+G D PVA
Sbjct: 92 PSSHVPVMLGEVLDIFSSVRLRSFVDCTLGAAGHSSSIIQSHSELKN-FVGMDVDPVA 148
>At4g31877.1 68417.m04530 expressed protein
Length = 102
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Frame = -2
Query: 427 SSIWSSLVWTKVSPRGSMPILYISMNCLTTSTFM----YLSQLFSML 299
+S+ SL++ S S+P+ + S NC+ S F+ ++SQ + ML
Sbjct: 6 ASLACSLLYLSDSGSDSVPVTFSSSNCVPISHFLSHVFFISQRYEML 52
>At2g35930.1 68415.m04410 U-box domain-containing protein similar to
immediate-early fungal elicitor protein CMPG1
[Petroselinum crispum] GI:14582200; contains Pfam
profile PF04564: U-box domain
Length = 411
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 139 KMKELCIMKLLDHILQPTMFEDIKEIAKEYNMVGWRIWSSRPCL 270
+M +L ++ L +LQ + KE AKE + R+W PCL
Sbjct: 358 EMLQLGVVAKLCLVLQVSCGGKTKEKAKELLKLHARVWKDSPCL 401
>At3g52450.1 68416.m05768 U-box domain-containing protein similar to
immediate-early fungal elicitor protein CMPG1
[Petroselinum crispum] GI:14582200; contains Pfam
profile PF04564: U-box domain
Length = 435
Score = 27.5 bits (58), Expect = 8.3
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 127 NLDMKMKELCIMKLLDHILQPTMFEDIKEIAKEYNMVGWRIWSSRPCL 270
+L +M +L ++ L +LQ + KE AKE + R+W PC+
Sbjct: 378 SLLQEMLQLGVVAKLCLVLQVSCGNKTKEKAKELLKLHARVWRESPCV 425
>At1g04960.1 68414.m00494 expressed protein
Length = 317
Score = 27.5 bits (58), Expect = 8.3
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3
Query: 204 VLKHGRLEDMVKQLHD 157
VL+HGRL D++ QL D
Sbjct: 25 VLRHGRLSDLIAQLQD 40
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,411,448
Number of Sequences: 28952
Number of extensions: 273219
Number of successful extensions: 799
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 798
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1373722560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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