Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10a01f
(566 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g05320.1 68414.m00539 myosin-related similar to non-muscle my... 37 0.008
At4g14760.1 68417.m02271 M protein repeat-containing protein con... 35 0.033
At4g15780.1 68417.m02402 synaptobrevin-related family protein si... 33 0.13
At5g06670.1 68418.m00753 kinesin motor protein-related 33 0.18
At1g03080.1 68414.m00282 kinase interacting family protein simil... 32 0.23
At3g55060.1 68416.m06115 expressed protein contains weak similar... 32 0.31
At3g30420.1 68416.m03847 hypothetical protein low similarity to ... 32 0.31
At3g48670.2 68416.m05314 XH/XS domain-containing protein / XS zi... 31 0.41
At3g48670.1 68416.m05313 XH/XS domain-containing protein / XS zi... 31 0.41
At5g27230.1 68418.m03248 expressed protein ; expression support... 31 0.54
At1g63300.1 68414.m07156 expressed protein similar to Intracellu... 31 0.71
At2g33610.1 68415.m04119 SWIRM domain-containing protein / DNA-b... 30 0.94
At4g35660.1 68417.m05063 expressed protein contains Pfam profile... 29 1.6
At3g47460.1 68416.m05161 SMC2-like condensin, putative similar t... 29 1.6
At1g18920.1 68414.m02355 hypothetical protein contains Pfam prof... 29 1.6
At1g12270.1 68414.m01419 stress-inducible protein, putative simi... 29 1.6
At4g32190.1 68417.m04581 centromeric protein-related low similar... 29 2.2
At3g22790.1 68416.m02873 kinase interacting family protein simil... 29 2.2
At1g62780.1 68414.m07086 expressed protein 29 2.2
At5g28400.1 68418.m03448 expressed protein 29 2.9
At5g28320.1 68418.m03438 expressed protein This is likely a pseu... 29 2.9
At4g14330.1 68417.m02207 phragmoplast-associated kinesin-related... 29 2.9
At4g31570.1 68417.m04483 expressed protein 28 3.8
At3g18480.1 68416.m02348 CCAAT displacement protein-related / CD... 28 3.8
At5g41780.1 68418.m05087 myosin heavy chain-related weak similar... 28 5.0
At5g35970.1 68418.m04332 DNA-binding protein, putative similar t... 28 5.0
At4g01730.1 68417.m00224 zinc finger (DHHC type) family protein ... 28 5.0
At3g13130.1 68416.m01643 hypothetical protein 28 5.0
At1g74770.1 68414.m08663 expressed protein 28 5.0
At1g08800.1 68414.m00979 expressed protein weak similarity to SP... 28 5.0
At5g53620.2 68418.m06662 expressed protein 27 6.6
At5g53620.1 68418.m06661 expressed protein 27 6.6
At3g51400.1 68416.m05630 expressed protein contains Pfam profile... 27 6.6
At3g46370.1 68416.m05022 leucine-rich repeat protein kinase, put... 27 6.6
At1g01660.1 68414.m00084 U-box domain-containing protein 27 6.6
At5g52280.1 68418.m06488 protein transport protein-related low s... 27 8.7
At5g16300.2 68418.m01906 expressed protein 27 8.7
At5g16300.1 68418.m01905 expressed protein 27 8.7
At5g13260.1 68418.m01523 expressed protein 27 8.7
At3g11590.1 68416.m01416 expressed protein 27 8.7
At1g62740.1 68414.m07081 stress-inducible protein, putative simi... 27 8.7
At1g12150.1 68414.m01407 expressed protein contains Pfam profile... 27 8.7
At1g04760.1 68414.m00472 synaptobrevin family protein similar to... 27 8.7
>At1g05320.1 68414.m00539 myosin-related similar to non-muscle
myosin II heavy chain (GI:19879404) [Loligo pealei];
ESTs gb|AA042402,gb|ATTS1380 come from this gene
Length = 828
Score = 37.1 bits (82), Expect = 0.008
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +2
Query: 290 KELETALRQHQNVIED-QAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERANHRL 466
K+L T L+ H+NVIE+ + Q +E EV ++ L++ LE +I++LE+ N L
Sbjct: 429 KDLITKLKSHENVIEEHKRQVLEASGVADTRKVEVEEALLKL-NTLESTIEELEKENGDL 487
Query: 467 AVDHAADKKHIKSLCSNIDTVEAKCEELQ 553
A + + + + S D +AK L+
Sbjct: 488 AEVNIKLNQKLANQGSETDDFQAKLSVLE 516
>At4g14760.1 68417.m02271 M protein repeat-containing protein
contains Pfam profile: PF02370 M protein repeat
Length = 1676
Score = 35.1 bits (77), Expect = 0.033
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Frame = +2
Query: 245 LQLAAELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQL 424
L+L + L KT+ ++ E ++R ++ E EI+ L ++ + L EVN+ Y+Q
Sbjct: 264 LELISSLEKTI----RDAEESVRVFRDQSEQAETEIKALKQELLKLNEVNEDLNVRYQQC 319
Query: 425 ELSIQDLER-ANHRLAVDHAAD-KKHIKSLCSNIDTVEAKCEELQ 553
+I LER +H A D+A + + + I TVE +C L+
Sbjct: 320 LETISKLEREVSH--AQDNAKRLSSEVLAGAAKIKTVEEQCALLE 362
Score = 28.3 bits (60), Expect = 3.8
Identities = 16/76 (21%), Positives = 34/76 (44%)
Frame = +2
Query: 239 DDLQLAAELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYE 418
D + + E +L+ L +++ + A+E+E + +LRE++ R E
Sbjct: 1017 DGMHVVEEENDAILQEAVALSNTCVVYRSFGSEMAEEVEDFVETVSSLREISTGLKRKVE 1076
Query: 419 QLELSIQDLERANHRL 466
LE ++ E+ + L
Sbjct: 1077 TLEKKLEGKEKESQGL 1092
>At4g15780.1 68417.m02402 synaptobrevin-related family protein
similar to Vesicle-associated membrane protein 722
(AtVAMP722) Synaptobrevin-related protein 1 (SP:P47192)
{Arabidopsis thaliana}
Length = 194
Score = 33.1 bits (72), Expect = 0.13
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 287 NKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRL 406
NKE +++H N I D A+EIE L K + EV L
Sbjct: 108 NKEFGPVMKEHMNYIVDHAEEIEKLIKVKAQVSEVKSIML 147
>At5g06670.1 68418.m00753 kinesin motor protein-related
Length = 992
Score = 32.7 bits (71), Expect = 0.18
Identities = 30/135 (22%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Frame = +2
Query: 158 VMDLVKKKFGGNEELEQDDITSRRCMLDDLQLAAELGKTLLERNKELETALRQHQNVIED 337
+ + + +K E+L+++ ++ + D L+L ++ + ++ + + VIE
Sbjct: 747 IQEQLTEKTSFCEDLQEEVANLKQQLSDALELG-DINSVTCHMQQSSQSPNKNEEKVIEA 805
Query: 338 QAQEIEYLTKQTVALREVNDS-RLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCS 514
QA EIE L + L E+N+ +R + E S E A+ A++ A + I L +
Sbjct: 806 QAFEIEELKLKAAELSELNEQLEIRNKKLAEESSYAKELAS-AAAIELKALSEEIARLMN 864
Query: 515 NIDTVEAKCEELQKT 559
+ + + A +QK+
Sbjct: 865 HNERLAADLAAVQKS 879
>At1g03080.1 68414.m00282 kinase interacting family protein similar to
kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1744
Score = 32.3 bits (70), Expect = 0.23
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 1/117 (0%)
Frame = +2
Query: 203 EQDDITSRRCML-DDLQLAAELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTVA 379
E+ + S + ML LQ A E K L E N LE +L +E+ +++ L +
Sbjct: 707 EKSGLHSEKDMLISRLQSATENSKKLSEENMVLENSLFNANVELEELKSKLKSLEESCHL 766
Query: 380 LREVNDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEEL 550
L + + E L I + + L +HA K + L + ++ K EEL
Sbjct: 767 LNDDKTTLTSERESLLSHIDTMRKRIEDLEKEHAELKVKVLELATERESSLQKIEEL 823
>At3g55060.1 68416.m06115 expressed protein contains weak similarity
to intracellular protein transport protein USO1
(Swiss-Prot:P25386) [Saccharomyces cerevisiae];
expression supported by MPSS
Length = 896
Score = 31.9 bits (69), Expect = 0.31
Identities = 31/107 (28%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Frame = +2
Query: 158 VMDLVKKKFGGNEELEQDDITSR---RCMLDDLQLAAELGKTLLERNKELETALRQHQNV 328
V + + +GG++ Q+ I SR +CM DDL E+ E+ +L +A + Q
Sbjct: 276 VNEYYTQDYGGHQ---QNCIRSRNVYKCMEDDLDSELEMKIKEAEKRAKLFSAELEQQRC 332
Query: 329 IEDQAQEIEYLTKQTVALREVNDSRLRI-YEQLE-LSIQDLERANHR 463
+ D ++ L A+R++ D RL + +E + L Q +ERA+ R
Sbjct: 333 LSDCDFDVSSLVG---AIRKLEDERLHLAFENVNLLRSQIVERASAR 376
>At3g30420.1 68416.m03847 hypothetical protein low similarity to
SP|Q9UUA2 DNA repair and recombination protein pif1,
mitochondrial precursor {Schizosaccharomyces pombe}
Length = 837
Score = 31.9 bits (69), Expect = 0.31
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Frame = +2
Query: 194 EELEQDDITSRRCMLDDLQLAAELGKTLLERNK--ELETALRQHQNVIEDQAQEIEYLTK 367
E + D + ++ +L+ QL EL LE+ E+ET LRQH+ + D E
Sbjct: 260 ESMADDVLRKQQRVLNFPQL--ELKAKELEKYTLIEIETLLRQHEKSLSDYP---EMPQP 314
Query: 368 QTVALREVNDSRLRIYEQLELSIQDLERANH 460
+ L EVN+S LR ++ +++I D ER H
Sbjct: 315 EKSILEEVNNSLLR--QEFQINI-DKERETH 342
>At3g48670.2 68416.m05314 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 647
Score = 31.5 bits (68), Expect = 0.41
Identities = 25/113 (22%), Positives = 48/113 (42%)
Frame = +2
Query: 218 TSRRCMLDDLQLAAELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVND 397
T R + +DL+ A +L E + A + + + EDQ ++ E L ++ + L D
Sbjct: 362 TERMKLSEDLEQNASKNSSLELAAMEQQKADEEVKKLAEDQRRQKEELHEKIIRLERQRD 421
Query: 398 SRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQK 556
+ I ++E L H + A K + + ++ EA+ +L K
Sbjct: 422 QKQAIELEVEQLKGQLNVMKHMASDGDAEVVKEVDIIFKDLGEKEAQLADLDK 474
>At3g48670.1 68416.m05313 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 647
Score = 31.5 bits (68), Expect = 0.41
Identities = 25/113 (22%), Positives = 48/113 (42%)
Frame = +2
Query: 218 TSRRCMLDDLQLAAELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVND 397
T R + +DL+ A +L E + A + + + EDQ ++ E L ++ + L D
Sbjct: 362 TERMKLSEDLEQNASKNSSLELAAMEQQKADEEVKKLAEDQRRQKEELHEKIIRLERQRD 421
Query: 398 SRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQK 556
+ I ++E L H + A K + + ++ EA+ +L K
Sbjct: 422 QKQAIELEVEQLKGQLNVMKHMASDGDAEVVKEVDIIFKDLGEKEAQLADLDK 474
>At5g27230.1 68418.m03248 expressed protein ; expression supported
by MPSS
Length = 948
Score = 31.1 bits (67), Expect = 0.54
Identities = 28/128 (21%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Frame = +2
Query: 200 LEQDDITSR--RCMLDDLQLAAELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTK-- 367
LE DI+ R R L+ LQ A L + KE+E+ ++V+E++A+E+E L +
Sbjct: 8 LELVDISKRNFRKTLESLQEGAHSLLLLTIQWKEIESYFDSTRSVLEERAKELEALEESI 67
Query: 368 --QTVALREVNDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKC 541
+ + L + I E ++ + E+ ++ A+ + K ++ +
Sbjct: 68 KVKALELEKKEKELCLIDESMKAKQSEFEKKEKDFDLEQKAEVEKRKREVEQLEKFTTRM 127
Query: 542 EELQKTVD 565
E +++ D
Sbjct: 128 ESVERVSD 135
>At1g63300.1 68414.m07156 expressed protein similar to Intracellular
protein transport protein USO1 (Swiss-Prot:P25386)
[Saccharomyces cerevisiae]; similar to Myosin II heavy
chain, non muscle (Swiss-Prot:P08799) [Dictyostelium
discoideum]
Length = 1029
Score = 30.7 bits (66), Expect = 0.71
Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Frame = +2
Query: 269 KTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLE 448
+ L E++ E++ R ++V + QEI+ L ++ L++ DS + EQ E DLE
Sbjct: 703 ENLDEKSNEIDNQKRHEEDVTANLNQEIKILKEEIENLKKNQDSLMLQAEQAENLRVDLE 762
Query: 449 RANHR-LAVDHAADKKHIK--SLCSNIDTVEAKCEEL 550
+ + + + ++++K L S I + + E L
Sbjct: 763 KTKKSVMEAEASLQRENMKKIELESKISLMRKESESL 799
>At2g33610.1 68415.m04119 SWIRM domain-containing protein /
DNA-binding family protein contains similarity to
SWI/SNF complex 170 KDa subunit [Homo sapiens]
gi|1549241|gb|AAC50694; contains Pfam domain PF04433:
SWIRM domain, PF00249: Myb-like DNA-binding domain
Length = 469
Score = 30.3 bits (65), Expect = 0.94
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 6/118 (5%)
Frame = +2
Query: 197 ELEQDDITSRRCMLDDLQLAAELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQT- 373
+ E D SR D AA G+T RN E E A +++IE + E+E K+T
Sbjct: 356 DYEADKNASRDPNRQDAN-AASSGETT--RN-ESERAWADAKSLIEKEEHEVEGAIKETV 411
Query: 374 -VALREVNDSRLRIYEQLELSIQ----DLERANHRLAVDHAADKKHIKSLCSNIDTVE 532
V ++++ D R+ +E+L+L ++ LE + L VD H + D +E
Sbjct: 412 EVEMKKIRD-RIVHFEKLDLEMERSRKQLEEVRNLLFVDQLNIFFHTRKARKTEDRIE 468
>At4g35660.1 68417.m05063 expressed protein contains Pfam profile
PF03087: Arabidopsis protein of unknown function;
expression supported by MPSS
Length = 288
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 191 NEELEQDDITSRRCMLDDLQLAAELGKTLLERNKELETALRQHQNVIEDQAQEI 352
N +L +D + +LD +L TL+E +EL++ALR+ + + EI
Sbjct: 86 NRKLVEDALDESIVLLDVSDFTRDLIGTLMEHIQELQSALRRRRGNLSSVQSEI 139
>At3g47460.1 68416.m05161 SMC2-like condensin, putative similar to
SMC2-like condensin (TITAN3) [Arabidopsis thaliana]
GI:14279543; contains Pfam profiles PF02483: SMC family
C-terminal domain, PF02463: RecF/RecN/SMC N terminal
domain
Length = 1171
Score = 29.5 bits (63), Expect = 1.6
Identities = 29/93 (31%), Positives = 43/93 (46%)
Frame = +2
Query: 269 KTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLE 448
KTL R + L+ H+NV E E E +T++ L+ S + Q+ D+
Sbjct: 794 KTLKARIQASSKDLKGHENVRERLVMEQEAVTQEQSYLKSQLTS---LRTQISTLASDV- 849
Query: 449 RANHRLAVDHAADKKHIKSLCSNIDTVEAKCEE 547
N R VD A K H +SL S + + AK +E
Sbjct: 850 -GNQRAKVD-AIQKDHDQSL-SELKLIHAKMKE 879
>At1g18920.1 68414.m02355 hypothetical protein contains Pfam profile
PF03794: Domain of Unknown function
Length = 980
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 7/55 (12%)
Frame = +2
Query: 335 DQAQEIEYLTKQTVALREVNDSRLRI-------YEQLELSIQDLERANHRLAVDH 478
D E+E+L K + L E+ + + + YE+L +S+QD+ ++ H+L +H
Sbjct: 688 DHELEVEHLNKVSFLLNELAELNMLVLDHKNVKYEKLCMSLQDICKSIHKLLSEH 742
>At1g12270.1 68414.m01419 stress-inducible protein, putative similar
to sti (stress inducible protein) [Glycine max]
GI:872116; contains Pfam profile PF00515 TPR Domain
Length = 572
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 260 ELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREV 391
ELG ++ K+ ETA++ + IE ++I YLT + E+
Sbjct: 249 ELGNAAYKK-KDFETAIQHYSTAIEIDDEDISYLTNRAAVYLEM 291
>At4g32190.1 68417.m04581 centromeric protein-related low similarity
to SP|Q02224 Centromeric protein E (CENP-E protein)
{Homo sapiens}
Length = 783
Score = 29.1 bits (62), Expect = 2.2
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 10/99 (10%)
Frame = +2
Query: 203 EQDDITSRRCMLDDLQLAAELGKTLLERNKELETALRQHQNVIED----------QAQEI 352
E+D + R +L D + L +R K + A +H+++ E+ QA+EI
Sbjct: 125 EEDLHDAERKLLSDKNKLNRAKEELEKREKTISEASLKHESLQEELKRANVELASQAREI 184
Query: 353 EYLTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLA 469
E L + LRE ++ R + L L ++LE+ +A
Sbjct: 185 EELKHK---LRERDEERAALQSSLTLKEEELEKMRQEIA 220
>At3g22790.1 68416.m02873 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1694
Score = 29.1 bits (62), Expect = 2.2
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Frame = +2
Query: 260 ELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDS-RLRIYEQLELSI 436
E+ L ++ ++ E + N EI+ L + V + EV D RLR Y+Q +I
Sbjct: 300 EMISNLEKKVRDAEENAQNFSNQSAKAEDEIKALRHELVKVNEVKDGLRLR-YQQCLETI 358
Query: 437 QDLER-ANHRLAVDHAAD-KKHIKSLCSNIDTVEAKCEELQKT 559
LER +H A D+A + + + + TVE +C L+ +
Sbjct: 359 SKLEREVSH--AQDNAKRLSSEVLAGAAKLKTVEDQCTLLESS 399
Score = 27.1 bits (57), Expect = 8.7
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 215 ITSRRCMLDDLQLAAELGKTLLERNKELETAL 310
I R +L LQ+ E + LLE+N LET+L
Sbjct: 659 IAERANLLSQLQIMTENMQKLLEKNSLLETSL 690
>At1g62780.1 68414.m07086 expressed protein
Length = 237
Score = 29.1 bits (62), Expect = 2.2
Identities = 31/99 (31%), Positives = 41/99 (41%), Gaps = 1/99 (1%)
Frame = +2
Query: 254 AAELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELS 433
A E + L KE ALRQ + V + A+ IEY E +RLR E
Sbjct: 61 AREAFQKQLREEKERRQALRQSRVVPDTAAELIEYFLDTEAQEIEYEIARLRGRLNDEFF 120
Query: 434 IQ-DLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEE 547
Q LE R AV AD I+ ++T++ EE
Sbjct: 121 AQIRLEIGQIRFAVTKTAD---IEDRLIELETLQKALEE 156
>At5g28400.1 68418.m03448 expressed protein
Length = 996
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +2
Query: 197 ELEQDDITSRRCMLDDLQLAAELGKTLLE 283
E+++D++ SRR LDDL+L + + +LE
Sbjct: 921 EVDEDEVLSRRSGLDDLELVSSRLQKVLE 949
>At5g28320.1 68418.m03438 expressed protein This is likely a
pseudogene.
Length = 967
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +2
Query: 197 ELEQDDITSRRCMLDDLQLAAELGKTLLE 283
E+++D++ SRR LDDL+L + + +LE
Sbjct: 892 EVDEDEVLSRRSGLDDLELVSSRLQKVLE 920
>At4g14330.1 68417.m02207 phragmoplast-associated kinesin-related
protein 2 (PAKRP2) identical to cDNA
phragmoplast-associated kinesin-related protein 2
(PAKRP2) GI:16973450
Length = 869
Score = 28.7 bits (61), Expect = 2.9
Identities = 20/93 (21%), Positives = 43/93 (46%)
Frame = +2
Query: 173 KKKFGGNEELEQDDITSRRCMLDDLQLAAELGKTLLERNKELETALRQHQNVIEDQAQEI 352
K K+GG+E + SR +D+ + + K ++ KE A +Q + E+ A
Sbjct: 376 KDKYGGDESASAVILGSRIAAMDEFIIKLQSEKK--QKEKERNEAQKQLKKKEEEVAALR 433
Query: 353 EYLTKQTVALREVNDSRLRIYEQLELSIQDLER 451
LT++ + + ++ E+ +L +L++
Sbjct: 434 SLLTQREACATNEEEIKEKVNERTQLLKSELDK 466
>At4g31570.1 68417.m04483 expressed protein
Length = 2712
Score = 28.3 bits (60), Expect = 3.8
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +2
Query: 275 LLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERA 454
L+E K+L+T + + V E E+ Y+ ALRE + + ++E ++DL+
Sbjct: 1406 LVEVEKKLKTYIEAGERV-EALESELSYIRNSATALRESFLLKDSLLHRIEEILEDLDLP 1464
Query: 455 NHRLAVD 475
H A D
Sbjct: 1465 EHFHARD 1471
>At3g18480.1 68416.m02348 CCAAT displacement protein-related /
CDP-related similar to CCAAT displacement protein (CDP)
(Cut-like 1) (Swiss-Prot:P39880) [Homo sapiens];
contains Pfam:PF00904 Involucrin repeat
Length = 689
Score = 28.3 bits (60), Expect = 3.8
Identities = 30/139 (21%), Positives = 56/139 (40%), Gaps = 2/139 (1%)
Frame = +2
Query: 146 TMSEVMDLVKKKFGGNEELEQDDITSRRCMLDDLQLAAELGKT-LLERNKELETALRQHQ 322
TM ++ +L + + ++ ++ + L E +T LL +E Q Q
Sbjct: 228 TMQKLHELAQNQLFELRAQSDEETAGKQSEVSLLMDEVERAQTRLLTLEREKGHLRSQLQ 287
Query: 323 NVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIK 502
ED + L ++ +I +L + I ++E A H A+ K +
Sbjct: 288 TANEDTDNKKSDNIDSNSMLENSLTAKEKIISELNMEIHNVETALANERESHVAEIKKLN 347
Query: 503 SLCSNIDT-VEAKCEELQK 556
SL + DT +E +ELQ+
Sbjct: 348 SLLNKKDTIIEEMKKELQE 366
>At5g41780.1 68418.m05087 myosin heavy chain-related weak similarity
to M protein, serotype 5 precursor (SP:P02977)
{Streptococcus pyogenes} and to Myosin heavy chain,
non-muscle (SP:Q99323) (Zipper protein) (Myosin II)
{Drosophila melanogaster}
Length = 537
Score = 27.9 bits (59), Expect = 5.0
Identities = 27/114 (23%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Frame = +2
Query: 194 EELEQDDITSRRCMLDDLQLAAELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQT 373
+E+ + + + L+ + ELG + KE+++A + + + E+E L +
Sbjct: 387 KEMVEQGLAGPEMAIKKLEESGELGNRVTRLAKEIDSARKWVKEKDNNMKHEVETL-EAK 445
Query: 374 VALREVNDSRLRIYEQL-ELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVE 532
+ RE +S L+ E+L +L + E +L++ A K IK L N+ E
Sbjct: 446 LECREAQESLLK--EKLSKLEAKLAEEGTEKLSLSKAMRK--IKKLEINVKEKE 495
>At5g35970.1 68418.m04332 DNA-binding protein, putative similar to
SWISS-PROT:Q60560 DNA-binding protein SMUBP-2
(Immunoglobulin MU binding protein 2, SMUBP-2)
[Mesocricetus auratus]
Length = 961
Score = 27.9 bits (59), Expect = 5.0
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Frame = +2
Query: 146 TMSEVMDLVKKKFGGNEELEQDDITS--RRCMLDDL------QLAAELGKTLLERNKELE 301
++ E+++ F E ++ D+ R+C+ DD+ QL +LGKTL ++ KE
Sbjct: 575 SLGEIVNSKLASFRAELERKKSDLRKDLRQCLRDDVLAAGIRQLLKQLGKTLKKKEKETV 634
Query: 302 TALRQHQNVI 331
+ + V+
Sbjct: 635 KEILSNAQVV 644
>At4g01730.1 68417.m00224 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 499
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -1
Query: 161 LLLTLFTVYGTMRYIDVFLSHKLIIMRNGSETS*Y 57
++L LFT YG+ +FL H ++++R G T Y
Sbjct: 248 IILVLFTAYGSAAMGQLFLFH-VVLIRKGMRTYDY 281
>At3g13130.1 68416.m01643 hypothetical protein
Length = 201
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 470 VDHAADKKHIKSLCSNIDTVEAKCEEL 550
V HA DK ++ LC+ + V AKC L
Sbjct: 41 VTHAVDKNYMFLLCNGLVVVVAKCSGL 67
>At1g74770.1 68414.m08663 expressed protein
Length = 985
Score = 27.9 bits (59), Expect = 5.0
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +2
Query: 293 ELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLAV 472
ELET + I ++ E+ L T+ + R YE+L LS++++ ++ H+L
Sbjct: 695 ELETKHFDKVSFILNEMSELNMLVS-TINTTAADHDRKMKYERLCLSLREICKSMHKLLS 753
Query: 473 DH 478
+H
Sbjct: 754 EH 755
>At1g08800.1 68414.m00979 expressed protein weak similarity to
SP|Q02455 Myosin-like protein MLP1 {Saccharomyces
cerevisiae}; contains Pfam profile PF04576: Protein of
unknown function, DUF593
Length = 1113
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +2
Query: 200 LEQDDITSRRCMLDDLQLAAELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQT 373
L+++ + + L +L++ E + +E + L L + + +I+D EIEY QT
Sbjct: 932 LQEEKASFQMEALQNLRMMEEQAEYDMEAIQRLNDLLVEREKLIQDLEAEIEYFRDQT 989
>At5g53620.2 68418.m06662 expressed protein
Length = 682
Score = 27.5 bits (58), Expect = 6.6
Identities = 20/75 (26%), Positives = 36/75 (48%)
Frame = +2
Query: 197 ELEQDDITSRRCMLDDLQLAAELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTV 376
+LE+ D LD+ A+ G L E+NKEL T R+ + +++Q I +++
Sbjct: 142 KLEEKDRELHAIKLDNEAAWAKEG-ILREQNKELATFRRERDHSEAERSQNIHKISELQE 200
Query: 377 ALREVNDSRLRIYEQ 421
++E + EQ
Sbjct: 201 HIQEKESQLSELQEQ 215
>At5g53620.1 68418.m06661 expressed protein
Length = 682
Score = 27.5 bits (58), Expect = 6.6
Identities = 20/75 (26%), Positives = 36/75 (48%)
Frame = +2
Query: 197 ELEQDDITSRRCMLDDLQLAAELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTV 376
+LE+ D LD+ A+ G L E+NKEL T R+ + +++Q I +++
Sbjct: 142 KLEEKDRELHAIKLDNEAAWAKEG-ILREQNKELATFRRERDHSEAERSQNIHKISELQE 200
Query: 377 ALREVNDSRLRIYEQ 421
++E + EQ
Sbjct: 201 HIQEKESQLSELQEQ 215
>At3g51400.1 68416.m05630 expressed protein contains Pfam profile
PF03087: Arabidopsis protein of unknown function
Length = 277
Score = 27.5 bits (58), Expect = 6.6
Identities = 11/43 (25%), Positives = 25/43 (58%)
Frame = +2
Query: 437 QDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTVD 565
Q ++ R ++ K IKS+ +N+D V+ E+L+++++
Sbjct: 214 QMMDEELRRFSMAEEIKKDRIKSMITNLDKVDVAVEDLEESLE 256
>At3g46370.1 68416.m05022 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thalian] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 793
Score = 27.5 bits (58), Expect = 6.6
Identities = 28/106 (26%), Positives = 47/106 (44%)
Frame = +2
Query: 182 FGGNEELEQDDITSRRCMLDDLQLAAELGKTLLERNKELETALRQHQNVIEDQAQEIEYL 361
+G + D+ S +LDD QL A++ L R+ +L Q V+ ++
Sbjct: 602 YGCRPSIVHRDVKSTNILLDD-QLMAKIADFGLSRSFKLGEE-SQASTVVAGTLGYLDPE 659
Query: 362 TKQTVALREVNDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHI 499
+T L E++D +Y I LE ++ +DHA +K HI
Sbjct: 660 YYRTCRLAEMSD----VYS---FGILLLEIITNQNVIDHAREKAHI 698
>At1g01660.1 68414.m00084 U-box domain-containing protein
Length = 568
Score = 27.5 bits (58), Expect = 6.6
Identities = 18/89 (20%), Positives = 43/89 (48%)
Frame = +2
Query: 254 AAELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELS 433
A + K L++ ++ ++ + +++ + +E+E + K+ V + +R+YE+
Sbjct: 386 ACMISKNLMQLYEDEVRQRKEAEELVKRRREELEKVKKEKEEACSVGQNFMRLYEEEARR 445
Query: 434 IQDLERANHRLAVDHAADKKHIKSLCSNI 520
+ E ++ AA+K S+CS I
Sbjct: 446 RKGTEEELSKV----AAEKDAASSVCSEI 470
>At5g52280.1 68418.m06488 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 853
Score = 27.1 bits (57), Expect = 8.7
Identities = 19/90 (21%), Positives = 36/90 (40%)
Frame = +2
Query: 293 ELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLAV 472
E+E+ L +H+N+ + E L Q L E+ + Q + + +E N L++
Sbjct: 593 EMESKLSEHENLTKKTLAEANNLRLQNKTLEEMQEKTHTEITQEKEQRKHVEEKNKALSM 652
Query: 473 DHAADKKHIKSLCSNIDTVEAKCEELQKTV 562
+ + L D A E +K +
Sbjct: 653 KVQMLESEVLKLTKLRDESSAAATETEKII 682
>At5g16300.2 68418.m01906 expressed protein
Length = 1034
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +2
Query: 356 YLTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNI 520
+ TK +R V + + E + ++ L +R +D A H+KSLC +I
Sbjct: 32 FRTKPMSEIRIVESATRKNIEDKKEELRQLVGTRYRDLIDSADSIVHMKSLCESI 86
>At5g16300.1 68418.m01905 expressed protein
Length = 1068
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +2
Query: 356 YLTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNI 520
+ TK +R V + + E + ++ L +R +D A H+KSLC +I
Sbjct: 32 FRTKPMSEIRIVESATRKNIEDKKEELRQLVGTRYRDLIDSADSIVHMKSLCESI 86
>At5g13260.1 68418.m01523 expressed protein
Length = 537
Score = 27.1 bits (57), Expect = 8.7
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Frame = +2
Query: 299 ETALRQHQNVIEDQAQEIEYLTKQTVALR-EVNDSRLR---IYEQL---ELSIQDLERAN 457
E ALRQ + ++D Q + ++T ALR +V ++L I QL E + L
Sbjct: 250 EAALRQREAALKDARQNRDGTNRETTALRSQVETAKLETAAIVAQLQGAESEVNGLRTMT 309
Query: 458 HRLAVDHAADKKHIKSLC 511
HR+ + ++ + C
Sbjct: 310 HRMILTQKEMEEVVLKRC 327
>At3g11590.1 68416.m01416 expressed protein
Length = 622
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/75 (20%), Positives = 38/75 (50%)
Frame = +2
Query: 242 DLQLAAELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQ 421
+L++ +L + NK+L L + ++ + +EIE + V + +V D R +
Sbjct: 317 ELEVERKLRRRFESLNKKLGKELAETKSALMKAVKEIENEKRARVMVEKVCDELARDISE 376
Query: 422 LELSIQDLERANHRL 466
+ +++L+R + ++
Sbjct: 377 DKAEVEELKRESFKV 391
>At1g62740.1 68414.m07081 stress-inducible protein, putative similar
to sti (stress inducible protein) [Glycine max]
GI:872116; contains Pfam profile PF00515 TPR Domain
Length = 571
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2
Query: 248 QLAAELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREV 391
Q ELG ++ K+ ETA++ + +E ++I Y+T + E+
Sbjct: 244 QKEKELGNAAYKK-KDFETAIQHYSTAMEIDDEDISYITNRAAVHLEM 290
>At1g12150.1 68414.m01407 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
expression supported by MPSS
Length = 548
Score = 27.1 bits (57), Expect = 8.7
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 7/80 (8%)
Frame = +2
Query: 248 QLAAELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQ----TVALREVNDSR--LR 409
+L+ L LLE E+E + + E + ++ +T + T+ L+E D LR
Sbjct: 266 ELSRTLEAKLLETTSEIEVLREEMKKAHESEMNTVKIITNELNEATMRLQEAADDECSLR 325
Query: 410 -IYEQLELSIQDLERANHRL 466
+ L + ++DL R L
Sbjct: 326 SLVNSLRMELEDLRREREEL 345
>At1g04760.1 68414.m00472 synaptobrevin family protein similar to
Vesicle-associated membrane protein 722 (AtVAMP722)
Synaptobrevin-related protein 1 (SP:P47192) {Arabidopsis
thaliana}
Length = 220
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 287 NKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQL 424
NKE + L++H D +EI L+K + EV + E++
Sbjct: 107 NKEFGSKLKEHMQYCADHPEEISKLSKVKAQVTEVKGVMMENIEKV 152
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,445,077
Number of Sequences: 28952
Number of extensions: 220457
Number of successful extensions: 793
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1092379416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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