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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_A12
         (525 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ...   231   2e-61
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ...   231   2e-61
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER...   151   3e-37
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER...   151   3e-37
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677   149   1e-36
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92...   149   1e-36
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92...   149   1e-36
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence...   149   1e-36
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence...   149   1e-36
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence...   149   1e-36
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence...   149   1e-36
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence...   149   1e-36
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3...   149   1e-36
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1...   149   1e-36
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1...   149   1e-36
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1...   149   1e-36
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ...   149   1e-36
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ...   149   1e-36
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly...   149   1e-36
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /...   149   1e-36
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly...   147   3e-36
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu...   147   5e-36
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu...   138   2e-33
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ...   115   2e-26
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha...    92   2e-19
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER...    68   3e-12
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER...    68   4e-12
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi...    66   1e-11
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa...    57   8e-09
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa...    57   8e-09
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi...    52   2e-07
At4g01000.1 68417.m00135 ubiquitin family protein low similarity...    52   3e-07
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit...    51   4e-07
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER...    51   5e-07
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER...    50   1e-06
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER...    49   2e-06
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER...    49   2e-06
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER...    48   3e-06
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti...    47   7e-06
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER...    47   9e-06
At3g06455.1 68416.m00747 splicing factor-related contains weak s...    47   9e-06
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER...    46   2e-05
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ...    46   2e-05
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ...    46   2e-05
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa...    45   4e-05
At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi...    45   4e-05
At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi...    45   4e-05
At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi...    45   4e-05
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi...    45   4e-05
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1...    44   5e-05
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER...    43   1e-04
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ...    43   1e-04
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER...    42   2e-04
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER...    41   6e-04
At2g30100.1 68415.m03663 ubiquitin family protein low similarity...    39   0.002
At1g53980.1 68414.m06149 polyubiquitin-related contains similari...    39   0.002
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER...    38   0.005
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER...    36   0.013
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER...    36   0.017
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER...    36   0.017
At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase fa...    35   0.029
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER...    35   0.039
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-...    33   0.12 
At1g22050.1 68414.m02758 ubiquitin family protein contains INTER...    30   0.83 
At1g47680.1 68414.m05297 hypothetical protein                          29   2.5  
At3g46530.1 68416.m05051 disease resistance protein, RPP13-like ...    27   5.8  
At1g51480.1 68414.m05794 disease resistance protein (CC-NBS-LRR ...    27   5.8  
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-...    27   7.7  
At4g38340.1 68417.m05420 RWP-RK domain-containing protein simila...    27   7.7  
At3g47160.1 68416.m05120 expressed protein similar to MTD2 [Medi...    27   7.7  

>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
           ribosomal protein L40 (RPL40B) identical to GI:166929,
           GI:166930
          Length = 128

 Score =  231 bits (565), Expect = 2e-61
 Identities = 108/123 (87%), Positives = 114/123 (92%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 221 IQKESTLHLVLRLXGGTIEPSLRILAMKYNCXKMICRKCYARLHPRATNCRKTKCGHTNN 400
           IQKESTLHLVLRL GG IEPSL +LA KYN  KMICRKCYARLHPRA NCRK KCGH+N 
Sbjct: 61  IQKESTLHLVLRLRGGIIEPSLMMLARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 120

Query: 401 LRP 409
           LRP
Sbjct: 121 LRP 123


>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
           ribosomal protein L40 (RPL40A) identical to GI:166930,
           GI:166931
          Length = 128

 Score =  231 bits (565), Expect = 2e-61
 Identities = 108/123 (87%), Positives = 114/123 (92%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 221 IQKESTLHLVLRLXGGTIEPSLRILAMKYNCXKMICRKCYARLHPRATNCRKTKCGHTNN 400
           IQKESTLHLVLRL GG IEPSL +LA KYN  KMICRKCYARLHPRA NCRK KCGH+N 
Sbjct: 61  IQKESTLHLVLRLRGGIIEPSLMMLARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 120

Query: 401 LRP 409
           LRP
Sbjct: 121 LRP 123


>At2g35635.1 68415.m04370 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 154

 Score =  151 bits (366), Expect = 3e-37
 Identities = 72/78 (92%), Positives = 77/78 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 221 IQKESTLHLVLRLXGGTI 274
           IQKESTLHLVLRL GGT+
Sbjct: 61  IQKESTLHLVLRLRGGTM 78



 Score = 96.3 bits (229), Expect = 1e-20
 Identities = 44/76 (57%), Positives = 58/76 (76%)
 Frame = +2

Query: 47  IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 226
           I VKTLTGK I +++E +DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T  DY I+
Sbjct: 79  IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIE 138

Query: 227 KESTLHLVLRLXGGTI 274
             S LHLVL L GG +
Sbjct: 139 GGSVLHLVLALRGGLL 154


>At1g31340.1 68414.m03835 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 156

 Score =  151 bits (366), Expect = 3e-37
 Identities = 72/78 (92%), Positives = 77/78 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 221 IQKESTLHLVLRLXGGTI 274
           IQKESTLHLVLRL GGT+
Sbjct: 61  IQKESTLHLVLRLRGGTM 78



 Score = 99.1 bits (236), Expect = 2e-21
 Identities = 45/74 (60%), Positives = 58/74 (78%)
 Frame = +2

Query: 47  IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 226
           I VKTLTGK I +++E +DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+
Sbjct: 79  IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIE 138

Query: 227 KESTLHLVLRLXGG 268
             S LHLVL L GG
Sbjct: 139 GGSVLHLVLALRGG 152


>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
          Length = 382

 Score =  149 bits (361), Expect = 1e-36
 Identities = 71/77 (92%), Positives = 76/77 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364

Query: 221 IQKESTLHLVLRLXGGT 271
           IQKESTLHLVLRL GG+
Sbjct: 365 IQKESTLHLVLRLRGGS 381



 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 61  IQKESTLHLVLRLRGG 76



 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 137 IQKESTLHLVLRLRGG 152



 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 213 IQKESTLHLVLRLRGG 228



 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 289 IQKESTLHLVLRLRGG 304


>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
           GI:928809
          Length = 306

 Score =  149 bits (361), Expect = 1e-36
 Identities = 71/77 (92%), Positives = 76/77 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288

Query: 221 IQKESTLHLVLRLXGGT 271
           IQKESTLHLVLRL GG+
Sbjct: 289 IQKESTLHLVLRLRGGS 305



 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 61  IQKESTLHLVLRLRGG 76



 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 137 IQKESTLHLVLRLRGG 152



 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 213 IQKESTLHLVLRLRGG 228


>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
           GI:928809
          Length = 306

 Score =  149 bits (361), Expect = 1e-36
 Identities = 71/77 (92%), Positives = 76/77 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288

Query: 221 IQKESTLHLVLRLXGGT 271
           IQKESTLHLVLRL GG+
Sbjct: 289 IQKESTLHLVLRLRGGS 305



 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 61  IQKESTLHLVLRLRGG 76



 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 137 IQKESTLHLVLRLRGG 152



 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 213 IQKESTLHLVLRLRGG 228


>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
           senescence-associated protein; identical to GI:870791
          Length = 312

 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 61  IQKESTLHLVLRLRGG 76



 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 137 IQKESTLHLVLRLRGG 152



 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 213 IQKESTLHLVLRLRGG 228



 Score = 66.1 bits (154), Expect = 1e-11
 Identities = 31/34 (91%), Positives = 34/34 (100%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 142
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 262



 Score = 32.7 bits (71), Expect = 0.16
 Identities = 16/35 (45%), Positives = 25/35 (71%)
 Frame = +3

Query: 144 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 248
           VFL+T++VSS   ++ +M  L+ T TSR++  FTW
Sbjct: 263 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 297


>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
           senescence-associated protein; identical to GI:870791
          Length = 464

 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 61  IQKESTLHLVLRLRGG 76



 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 137 IQKESTLHLVLRLRGG 152



 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 213 IQKESTLHLVLRLRGG 228



 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 289 IQKESTLHLVLRLRGG 304



 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 365 IQKESTLHLVLRLRGG 380



 Score = 66.1 bits (154), Expect = 1e-11
 Identities = 31/34 (91%), Positives = 34/34 (100%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 142
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414



 Score = 32.7 bits (71), Expect = 0.16
 Identities = 16/35 (45%), Positives = 25/35 (71%)
 Frame = +3

Query: 144 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 248
           VFL+T++VSS   ++ +M  L+ T TSR++  FTW
Sbjct: 415 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 449


>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
           senescence-associated protein; identical to GI:870791
          Length = 388

 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 61  IQKESTLHLVLRLRGG 76



 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 137 IQKESTLHLVLRLRGG 152



 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 213 IQKESTLHLVLRLRGG 228



 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 289 IQKESTLHLVLRLRGG 304



 Score = 66.1 bits (154), Expect = 1e-11
 Identities = 31/34 (91%), Positives = 34/34 (100%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 142
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338



 Score = 32.7 bits (71), Expect = 0.16
 Identities = 16/35 (45%), Positives = 25/35 (71%)
 Frame = +3

Query: 144 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 248
           VFL+T++VSS   ++ +M  L+ T TSR++  FTW
Sbjct: 339 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 373


>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
           senescence-associated protein; identical to GI:870791
          Length = 464

 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 61  IQKESTLHLVLRLRGG 76



 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 137 IQKESTLHLVLRLRGG 152



 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 213 IQKESTLHLVLRLRGG 228



 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 289 IQKESTLHLVLRLRGG 304



 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 365 IQKESTLHLVLRLRGG 380



 Score = 66.1 bits (154), Expect = 1e-11
 Identities = 31/34 (91%), Positives = 34/34 (100%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 142
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414



 Score = 32.7 bits (71), Expect = 0.16
 Identities = 16/35 (45%), Positives = 25/35 (71%)
 Frame = +3

Query: 144 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 248
           VFL+T++VSS   ++ +M  L+ T TSR++  FTW
Sbjct: 415 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 449


>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
           senescence-associated protein; identical to GI:870791
          Length = 388

 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 61  IQKESTLHLVLRLRGG 76



 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 137 IQKESTLHLVLRLRGG 152



 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 213 IQKESTLHLVLRLRGG 228



 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 289 IQKESTLHLVLRLRGG 304



 Score = 66.1 bits (154), Expect = 1e-11
 Identities = 31/34 (91%), Positives = 34/34 (100%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 142
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338



 Score = 32.7 bits (71), Expect = 0.16
 Identities = 16/35 (45%), Positives = 25/35 (71%)
 Frame = +3

Query: 144 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 248
           VFL+T++VSS   ++ +M  L+ T TSR++  FTW
Sbjct: 339 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 373


>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
           GI:304117
          Length = 229

 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 61  IQKESTLHLVLRLRGG 76



 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 137 IQKESTLHLVLRLRGG 152



 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 213 IQKESTLHLVLRLRGG 228


>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
           GI:166795; similar to N. sylvestris hexameric
           polyubiquitin, GenBank accession number M74101
          Length = 305

 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 61  IQKESTLHLVLRLRGG 76



 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 137 IQKESTLHLVLRLRGG 152



 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 213 IQKESTLHLVLRLRGG 228



 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 289 IQKESTLHLVLRLRGG 304


>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
           GI:166795; similar to N. sylvestris hexameric
           polyubiquitin, GenBank accession number M74101
          Length = 229

 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 61  IQKESTLHLVLRLRGG 76



 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 137 IQKESTLHLVLRLRGG 152



 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 213 IQKESTLHLVLRLRGG 228


>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
           GI:166795; similar to N. sylvestris hexameric
           polyubiquitin, GenBank accession number M74101
          Length = 305

 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 61  IQKESTLHLVLRLRGG 76



 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 137 IQKESTLHLVLRLRGG 152



 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 213 IQKESTLHLVLRLRGG 228



 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 289 IQKESTLHLVLRLRGG 304


>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
           ribosomal protein S27A (RPS27aC) identical to GI:166933,
           GI:166934
          Length = 157

 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 61  IQKESTLHLVLRLRGG 76


>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
           ribosomal protein S27A (RPS27aB) identical to GI:166936
          Length = 157

 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 61  IQKESTLHLVLRLRGG 76


>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
           polyubiquitin GI:248337 from [Zea mays]
          Length = 294

 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 61  IQKESTLHLVLRLRGG 76



 Score =  145 bits (352), Expect = 1e-35
 Identities = 70/76 (92%), Positives = 74/76 (97%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE IPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 152 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYN 211

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 212 IQKESTLHLVLRLRGG 227



 Score =  141 bits (342), Expect = 2e-34
 Identities = 70/76 (92%), Positives = 74/76 (97%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+D N
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-N 135

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 136 IQKESTLHLVLRLRGG 151



 Score =  100 bits (240), Expect = 5e-22
 Identities = 48/53 (90%), Positives = 51/53 (96%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 199
           +QIFVKTLTGKTITLEVE+S TI+NVKAKIQDKEGIPPDQQRLIFAGKQLE G
Sbjct: 228 MQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGG 280


>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
           40S ribosomal protein S27A (RPS27aA) strong similarity
           to ubiquitin extension protein (UBQ5) GB:AAA32906
           GI:166934 from (Arabidopsis thaliana)
          Length = 156

 Score =  149 bits (360), Expect = 1e-36
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 61  IQKESTLHLVLRLRGG 76


>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
           polyubiquitin (ubq12) gene sequence GI:304121 from
           [Arabidopsis thaliana]
          Length = 230

 Score =  147 bits (357), Expect = 3e-36
 Identities = 70/76 (92%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+N+KAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 137 IQKESTLHLVLRLRGG 152



 Score =  143 bits (346), Expect = 7e-35
 Identities = 69/77 (89%), Positives = 74/77 (96%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGI PDQQRLIFAGKQ EDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYN 212

Query: 221 IQKESTLHLVLRLXGGT 271
           IQKESTLHLVLRL GG+
Sbjct: 213 IQKESTLHLVLRLRGGS 229



 Score =  131 bits (317), Expect = 2e-31
 Identities = 61/76 (80%), Positives = 70/76 (92%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIF+KTLTGKT  LEVE+SDTI+NVKAKIQD EGIPPDQ RLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60

Query: 221 IQKESTLHLVLRLXGG 268
           +Q++STLHL+LR  GG
Sbjct: 61  VQEDSTLHLLLRFRGG 76


>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
           polyubiquitin (ubq9) gene sequence GI:304120 from
           [Arabidopsis thaliana]
          Length = 322

 Score =  147 bits (356), Expect = 5e-36
 Identities = 69/76 (90%), Positives = 75/76 (98%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEG+PPDQQRLIFAGKQL+DGRTL+DYN
Sbjct: 79  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYN 138

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 139 IQKESTLHLVLRLRGG 154



 Score =  140 bits (339), Expect = 5e-34
 Identities = 67/76 (88%), Positives = 72/76 (94%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFV+TLT KTI LEVE+SDT +NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 155 MQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 214

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 215 IQKESTLHLVLRLCGG 230



 Score =  131 bits (317), Expect = 2e-31
 Identities = 66/77 (85%), Positives = 71/77 (92%), Gaps = 1/77 (1%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG-RTLSDY 217
           +QIFV TLTGKTITLEVE+SDTI+NVKAKIQDKE I PDQQRLIFAG+QLEDG  TL+DY
Sbjct: 231 MQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADY 290

Query: 218 NIQKESTLHLVLRLXGG 268
           NIQKESTLHLVLRL GG
Sbjct: 291 NIQKESTLHLVLRLRGG 307



 Score =  116 bits (278), Expect = 1e-26
 Identities = 56/76 (73%), Positives = 65/76 (85%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QI  KTLT KTIT++V +SDTI NVKAKIQD EGIP DQQRLIF+GK L+DGRTL+DY+
Sbjct: 3   MQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYS 62

Query: 221 IQKESTLHLVLRLXGG 268
           IQK+S LHL LRL GG
Sbjct: 63  IQKDSILHLALRLRGG 78


>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
           polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
           thaliana] (Genetics 139 (2), 921-939 (1995))
          Length = 631

 Score =  138 bits (334), Expect = 2e-33
 Identities = 67/76 (88%), Positives = 73/76 (96%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFV+TLTGKTITLEV++SDTI+NVKAKIQDKEGI P QQRLIFAGKQLEDGRTL+DYN
Sbjct: 79  MQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYN 138

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 139 IQKESTLHLVLRLCGG 154



 Score =  130 bits (313), Expect = 7e-31
 Identities = 63/76 (82%), Positives = 69/76 (90%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QI+ KTLT KTITL+VE SD+I NVKAKIQ+KEGIP DQQRLIFAGKQLEDG TL+DYN
Sbjct: 3   IQIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYN 62

Query: 221 IQKESTLHLVLRLXGG 268
           IQKESTLHLVLRL GG
Sbjct: 63  IQKESTLHLVLRLRGG 78



 Score =  113 bits (273), Expect = 5e-26
 Identities = 57/79 (72%), Positives = 65/79 (82%)
 Frame = +2

Query: 23  FIGATQLQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 202
           F+    +QIF+KTLTGKTI LEVE+SDTI NVK KIQ KEGI PDQQ LIF G+QLEDG 
Sbjct: 546 FLQRGGMQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGV 605

Query: 203 TLSDYNIQKESTLHLVLRL 259
           TL DY+I K+STL+LVLRL
Sbjct: 606 TLGDYDIHKKSTLYLVLRL 624



 Score =  105 bits (252), Expect = 2e-23
 Identities = 54/73 (73%), Positives = 62/73 (84%), Gaps = 2/73 (2%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGI--PPDQQRLIFAGKQLEDGRTLSD 214
           +QIFVKTLT K I LEVE+ DTIENVKA +QDKEGI   P+ QRLIF GK+L+DG TL+D
Sbjct: 319 MQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCTLAD 378

Query: 215 YNIQKESTLHLVL 253
           Y+IQKESTLHLVL
Sbjct: 379 YSIQKESTLHLVL 391



 Score =  105 bits (251), Expect = 2e-23
 Identities = 51/76 (67%), Positives = 59/76 (77%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +QIFVK   GK ITLEV +SDTI++VKAKIQDK G PPDQQ L+F G QL+DGRTL DYN
Sbjct: 393 MQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYN 452

Query: 221 IQKESTLHLVLRLXGG 268
           I+ ESTLHL   +  G
Sbjct: 453 IRNESTLHLFFHIRHG 468



 Score = 97.9 bits (233), Expect = 4e-21
 Identities = 52/82 (63%), Positives = 63/82 (76%), Gaps = 7/82 (8%)
 Frame = +2

Query: 41  LQIFVKTLTGK-----TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL--EDG 199
           +QIFV T +GK     T+TL+VE+SDTIENVKAKIQD+EG+ PD QRLIF G++L  ED 
Sbjct: 155 MQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDN 214

Query: 200 RTLSDYNIQKESTLHLVLRLXG 265
           RTL+DY I+  STL L LRL G
Sbjct: 215 RTLADYGIRNRSTLCLALRLRG 236



 Score = 96.3 bits (229), Expect = 1e-20
 Identities = 52/81 (64%), Positives = 59/81 (72%), Gaps = 5/81 (6%)
 Frame = +2

Query: 41  LQIFVKTL-----TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 205
           + IFVK L     TG+   LEVE+SDTI+NVKAK+QDKE IP D  RLIFAGK LE GRT
Sbjct: 238 MYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRT 297

Query: 206 LSDYNIQKESTLHLVLRLXGG 268
           L+ YNIQK STL+LV R   G
Sbjct: 298 LAHYNIQKGSTLYLVTRFRCG 318



 Score = 92.7 bits (220), Expect = 1e-19
 Identities = 51/83 (61%), Positives = 58/83 (69%), Gaps = 7/83 (8%)
 Frame = +2

Query: 41  LQIFVKTL-------TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 199
           +QIFVKT        T KTITLEVE+SDTI+NVK KIQ K GIP D+QRLIF G+ L   
Sbjct: 469 MQIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGS 528

Query: 200 RTLSDYNIQKESTLHLVLRLXGG 268
           RTL DYNIQK ST+H +    GG
Sbjct: 529 RTLLDYNIQKGSTIHQLFLQRGG 551


>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
           profile: PF00240 ubiquitin family
          Length = 158

 Score =  115 bits (276), Expect = 2e-26
 Identities = 54/71 (76%), Positives = 61/71 (85%)
 Frame = +2

Query: 47  IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 226
           IF+KTLTG+ I LEVE  DTIEN+KAKIQDK+GIP DQQRLIF GKQLEDG TL+DYNIQ
Sbjct: 88  IFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADYNIQ 147

Query: 227 KESTLHLVLRL 259
            +S LHL+ RL
Sbjct: 148 NDSILHLIKRL 158


>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
           A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
           from [Arabidopsis thaliana]
          Length = 78

 Score = 91.9 bits (218), Expect = 2e-19
 Identities = 41/76 (53%), Positives = 56/76 (73%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           ++I VKTLT K I +E+E +DTIE +K +I++KEGIPP  QR+++ GKQL D  T   YN
Sbjct: 1   MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60

Query: 221 IQKESTLHLVLRLXGG 268
           +++ S LHLVL L GG
Sbjct: 61  LERGSVLHLVLALRGG 76


>At1g53950.1 68414.m06145 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 216

 Score = 68.1 bits (159), Expect = 3e-12
 Identities = 40/86 (46%), Positives = 51/86 (59%), Gaps = 13/86 (15%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK------------ 184
           + IF+KTLTG+T T EV+ SDTI  +KAK ++KEGIP +QQRLIF G+            
Sbjct: 50  MMIFIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGRISIKTVKGKSIN 109

Query: 185 -QLEDGRTLSDYNIQKESTLHLVLRL 259
            ++ D     D  I  E T  LVLRL
Sbjct: 110 LEVADSSDTIDLKINGEPTRQLVLRL 135



 Score = 66.1 bits (154), Expect = 1e-11
 Identities = 32/70 (45%), Positives = 47/70 (67%)
 Frame = +2

Query: 32  ATQLQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 211
           A  ++IFV T+  KT  LEV+ SDTI+ +K+ I D+ G P DQQ L   G +L++  T+S
Sbjct: 138 AVLMRIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNATIS 197

Query: 212 DYNIQKESTL 241
           DYNI+ ++ L
Sbjct: 198 DYNIKPDANL 207



 Score = 27.9 bits (59), Expect = 4.4
 Identities = 14/26 (53%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
 Frame = +2

Query: 38  QLQIFVKTLTGKTITLEV-EASDTIE 112
           Q +I +KT+ GK+I LEV ++SDTI+
Sbjct: 95  QGRISIKTVKGKSINLEVADSSDTID 120



 Score = 27.1 bits (57), Expect = 7.7
 Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVE-ASDTIE 112
           + I +KTL GK I LEVE +S+TI+
Sbjct: 1   MHISIKTLEGKRIKLEVEDSSNTID 25


>At5g42220.1 68418.m05139 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 879

 Score = 67.7 bits (158), Expect = 4e-12
 Identities = 30/72 (41%), Positives = 48/72 (66%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           L++ +KTL  +T T +V  ++T+   K KI  + G+P  QQRLIF G+ L+D   LS+Y+
Sbjct: 24  LELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYH 83

Query: 221 IQKESTLHLVLR 256
           ++   TLHL++R
Sbjct: 84  LENGHTLHLIVR 95


>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
           to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
           {Saccharomyces cerevisiae}; contains Pfam profiles
           PF00240: Ubiquitin family, PF00632: HECT-domain
           (ubiquitin-transferase)
          Length = 873

 Score = 66.1 bits (154), Expect = 1e-11
 Identities = 32/77 (41%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
 Frame = +2

Query: 32  ATQLQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 208
           +T+LQIFV+ ++G KTI +  E  DT+E +  +I+ K  IP  +QR+I+ GKQL+   +L
Sbjct: 92  STRLQIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSL 151

Query: 209 SDYNIQKESTLHLVLRL 259
           + Y+I+++++L LV R+
Sbjct: 152 TYYSIEQDASLQLVARM 168


>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
           family protein / ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 566

 Score = 56.8 bits (131), Expect = 8e-09
 Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
 Frame = +2

Query: 59  TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKES 235
           TL G  I + V  SD+IE+VK +IQ   G     Q+L+F G++L      + DY + + +
Sbjct: 40  TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGN 99

Query: 236 TLHLVLRLXGGTIEPSLRILAMKYNCXKMICR 331
            LHLVL+L        L++L +K  C K  CR
Sbjct: 100 ILHLVLKL------SDLQVLDVKTTCGKH-CR 124



 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
 Frame = +2

Query: 35  TQLQIF-VKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRT 205
           + LQ+  VKT  GK     VE    I  VK +I  K G  + PD+Q +++ G++LED   
Sbjct: 108 SDLQVLDVKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSL 167

Query: 206 LSDYNIQKESTLHLVLR 256
           ++D     +S LHL++R
Sbjct: 168 INDICRNDDSVLHLLVR 184


>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
           family protein / ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 566

 Score = 56.8 bits (131), Expect = 8e-09
 Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
 Frame = +2

Query: 59  TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKES 235
           TL G  I + V  SD+IE+VK +IQ   G     Q+L+F G++L      + DY + + +
Sbjct: 40  TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGN 99

Query: 236 TLHLVLRLXGGTIEPSLRILAMKYNCXKMICR 331
            LHLVL+L        L++L +K  C K  CR
Sbjct: 100 ILHLVLKL------SDLQVLDVKTTCGKH-CR 124



 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
 Frame = +2

Query: 35  TQLQIF-VKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRT 205
           + LQ+  VKT  GK     VE    I  VK +I  K G  + PD+Q +++ G++LED   
Sbjct: 108 SDLQVLDVKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSL 167

Query: 206 LSDYNIQKESTLHLVLR 256
           ++D     +S LHL++R
Sbjct: 168 INDICRNDDSVLHLLVR 184


>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
           to DNA repair by nucleotide excision (NER) RAD23
           protein, isoform I GI:1914683 from [Daucus carota]
          Length = 378

 Score = 52.0 bits (119), Expect = 2e-07
 Identities = 27/73 (36%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 214
           ++IFVKTL+G    +EV+ +D + +VK  I+  +G   P  +Q LI  GK L+D  TL +
Sbjct: 1   MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEE 60

Query: 215 YNIQKESTLHLVL 253
            N+ + S + ++L
Sbjct: 61  NNVVENSFIVIML 73


>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
           SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
           profile PF00240: Ubiquitin family
          Length = 415

 Score = 51.6 bits (118), Expect = 3e-07
 Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 217
           LQ FV+ L GK++TL   +     E +K +I ++  IP   QRLI  G Q+ DG  +S  
Sbjct: 9   LQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAIS-- 66

Query: 218 NIQKESTLHLVLRLXGG 268
             Q ++T++LVL L GG
Sbjct: 67  --QPDATVNLVLSLRGG 81


>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
           to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
           GI:9937505; contains Pfam profiles PF00240: Ubiquitin
           family, PF00627: UBA/TS-N domain
          Length = 551

 Score = 51.2 bits (117), Expect = 4e-07
 Identities = 20/66 (30%), Positives = 38/66 (57%)
 Frame = +2

Query: 53  VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 232
           ++   G   +++     T+E+ K  +     +P +QQRLI+ G+ L+D +TL  Y +Q +
Sbjct: 22  IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81

Query: 233 STLHLV 250
            T+H+V
Sbjct: 82  HTIHMV 87


>At2g17190.1 68415.m01985 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 538

 Score = 50.8 bits (116), Expect = 5e-07
 Identities = 22/66 (33%), Positives = 37/66 (56%)
 Frame = +2

Query: 53  VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 232
           V+   G   ++      T+E+ K  I     +P +QQRLI+ G+ L+D +TL  Y +Q +
Sbjct: 22  VRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81

Query: 233 STLHLV 250
            T+H+V
Sbjct: 82  HTVHMV 87


>At4g02970.1 68417.m00404 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 270

 Score = 49.6 bits (113), Expect = 1e-06
 Identities = 24/69 (34%), Positives = 39/69 (56%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           + +++ T TG + ++ ++  +T+  +K KI+  +GIP  +Q L   GK LED     DY 
Sbjct: 1   MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60

Query: 221 IQKESTLHL 247
           I  ES L L
Sbjct: 61  ILFESRLLL 69


>At5g11080.1 68418.m01294 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 352

 Score = 48.8 bits (111), Expect = 2e-06
 Identities = 26/71 (36%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSDY 217
           ++I +K L   T TL VE +  + ++K  I    G+ P++Q RL+F G+ L++ + LSDY
Sbjct: 11  IRIKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSDY 70

Query: 218 NIQKESTLHLV 250
           ++++  TL+LV
Sbjct: 71  HVEEGHTLYLV 81


>At1g64470.1 68414.m07309 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 213

 Score = 48.8 bits (111), Expect = 2e-06
 Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
 Frame = +2

Query: 59  TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKES 235
           +++G T+ + +  SD+I  VK +IQ   G    +Q+L+F+G++L  +   + DY +   S
Sbjct: 40  SVSGSTMPMLILESDSIAEVKLRIQTCNGFRVRRQKLVFSGRELARNASRVKDYGVTGGS 99

Query: 236 TLHLVLRL 259
            LHLVL+L
Sbjct: 100 VLHLVLKL 107



 Score = 35.9 bits (79), Expect = 0.017
 Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKI-QDKEGIPP-DQQRLIFAGKQLEDGRTLSD 214
           L + V T  GK     V+    +  +K +I ++ +G P  D Q ++F G++L+D R +  
Sbjct: 111 LLVTVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDG 170

Query: 215 YNIQKESTLHLVLR 256
                 S +HL+++
Sbjct: 171 ICKDGNSVIHLLVK 184


>At3g13235.1 68416.m01666 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 414

 Score = 48.4 bits (110), Expect = 3e-06
 Identities = 21/71 (29%), Positives = 45/71 (63%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           ++I V T   + ITL+V++ +T+ENVKA ++ +  +P  QQ+L++ G ++ +   LS   
Sbjct: 1   MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60

Query: 221 IQKESTLHLVL 253
           ++ +  L +++
Sbjct: 61  VKDDDLLMMMV 71


>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
           SP:P42740 from [Aglaothamnion neglectum]
          Length = 79

 Score = 47.2 bits (107), Expect = 7e-06
 Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK---QLEDGRTLS 211
           +Q+F+    GK   +EVE + TI ++K KI D  G+    Q L   GK   ++  G T+ 
Sbjct: 1   MQVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMD 60

Query: 212 DYNIQKESTLHLVLRLXGG 268
           DY I+     H+  R+ GG
Sbjct: 61  DYKIKACDIFHMSDRMRGG 79


>At4g03350.1 68417.m00457 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 263

 Score = 46.8 bits (106), Expect = 9e-06
 Identities = 23/67 (34%), Positives = 37/67 (55%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           + + + T TG + ++ ++  +T+  +K KI+  +GIP  +Q L   GK LED     DY 
Sbjct: 1   MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60

Query: 221 IQKESTL 241
           I  ES L
Sbjct: 61  ILFESLL 67


>At3g06455.1 68416.m00747 splicing factor-related contains weak
           similarity to Swiss-Prot:Q12874 splicing factor 3A
           subunit 3 (Spliceosome associated protein 61, SAP 61,
           SF3a60) [Homo sapiens]
          Length = 366

 Score = 46.8 bits (106), Expect = 9e-06
 Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 217
           LQ FV+ L GK++TL   +     E +K +I ++  IP   QRLI  G Q+     +S  
Sbjct: 9   LQFFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQIPGASAIS-- 66

Query: 218 NIQKESTLHLVLRLXGG 268
             Q ++T++LVL L GG
Sbjct: 67  --QSDTTMNLVLSLRGG 81


>At4g03370.1 68417.m00459 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 295

 Score = 46.0 bits (104), Expect = 2e-05
 Identities = 21/69 (30%), Positives = 40/69 (57%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +++ V+  +G T ++++   DT+   K KI+  + IP  +Q + F GK LED   + +++
Sbjct: 1   MKMTVENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWD 60

Query: 221 IQKESTLHL 247
           I +   LHL
Sbjct: 61  ILQNPLLHL 69


>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
           profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
           domain;
          Length = 299

 Score = 46.0 bits (104), Expect = 2e-05
 Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 211
           ++IFVKTL G    +EV+  D++ +VK  I+  +G    P  +Q LI  GK L+D  T+ 
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60

Query: 212 DYNIQKESTLHLVL 253
           +  + + S + +++
Sbjct: 61  ENKVAENSFIVIMM 74


>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
           profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
           domain;
          Length = 419

 Score = 46.0 bits (104), Expect = 2e-05
 Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 211
           ++IFVKTL G    +EV+  D++ +VK  I+  +G    P  +Q LI  GK L+D  T+ 
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60

Query: 212 DYNIQKESTLHLVL 253
           +  + + S + +++
Sbjct: 61  ENKVAENSFIVIMM 74


>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
           family protein / ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain, Pfam profile
           PF00454:  Phosphatidylinositol 3- and 4-kinase
          Length = 574

 Score = 44.8 bits (101), Expect = 4e-05
 Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
 Frame = +2

Query: 59  TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE-DGRTLSDYNIQKES 235
           T+ G  I   V  SD+I +VK +IQ  +G    +Q+L++ G+++  +   + DY +    
Sbjct: 38  TIAGSVIPKRVMESDSIASVKLRIQSIKGFFVKKQKLLYDGREVSRNDSQIRDYGLADGK 97

Query: 236 TLHLVLRL 259
            LHLV+RL
Sbjct: 98  LLHLVIRL 105



 Score = 42.7 bits (96), Expect = 1e-04
 Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
 Frame = +2

Query: 47  IFVKTLTGKTITLEVEASDTIENVKAKIQDKE---GIPPDQQRLIFAGKQLEDGRTLSDY 217
           I V+T+ GK   L VE S  +  VK +I  KE   GIP D + L   G++L+D R ++D 
Sbjct: 111 ISVRTVDGKEFELVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLDGEELDDQRLITDL 169

Query: 218 NIQKESTLHLVL 253
               ++ +HL++
Sbjct: 170 CQNGDNVIHLLI 181


>At1g79650.3 68414.m09289 DNA repair protein RAD23, putative similar
           to DNA repair by nucleotide excision (NER) RAD23
           protein, isoform II GI:1914685 from [Daucus carota];
           contains Pfam profiles PF00240: Ubiquitin family,
           PF00627: UBA/TS-N domain
          Length = 351

 Score = 44.8 bits (101), Expect = 4e-05
 Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 211
           +++ VKTL G    + V  SDTI  VK  I+D +G    P  QQ LI  GK L+D  +L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 212 DYNIQKESTLHLVL 253
           +  + +E  L ++L
Sbjct: 61  ENKVTEEGFLVVML 74


>At1g79650.2 68414.m09288 DNA repair protein RAD23, putative similar
           to DNA repair by nucleotide excision (NER) RAD23
           protein, isoform II GI:1914685 from [Daucus carota];
           contains Pfam profiles PF00240: Ubiquitin family,
           PF00627: UBA/TS-N domain
          Length = 365

 Score = 44.8 bits (101), Expect = 4e-05
 Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 211
           +++ VKTL G    + V  SDTI  VK  I+D +G    P  QQ LI  GK L+D  +L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 212 DYNIQKESTLHLVL 253
           +  + +E  L ++L
Sbjct: 61  ENKVTEEGFLVVML 74


>At1g79650.1 68414.m09287 DNA repair protein RAD23, putative similar
           to DNA repair by nucleotide excision (NER) RAD23
           protein, isoform II GI:1914685 from [Daucus carota];
           contains Pfam profiles PF00240: Ubiquitin family,
           PF00627: UBA/TS-N domain
          Length = 371

 Score = 44.8 bits (101), Expect = 4e-05
 Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 211
           +++ VKTL G    + V  SDTI  VK  I+D +G    P  QQ LI  GK L+D  +L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 212 DYNIQKESTLHLVL 253
           +  + +E  L ++L
Sbjct: 61  ENKVTEEGFLVVML 74


>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
           to DNA repair by nucleotide excision (NER) RAD23
           protein, isoform II GI:1914685 from [Daucus carota]
          Length = 368

 Score = 44.8 bits (101), Expect = 4e-05
 Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 211
           +++ VKTL G    + V  +DTI  VK  I+D   K+  P  QQ LI  GK L+D  TL 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60

Query: 212 DYNIQKESTLHLVL 253
           +  + +E  L ++L
Sbjct: 61  ENKVTEEGFLVVML 74


>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
           [Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
           Pfam domains, PF00439: Bromodomain and PF00240:
           Ubiquitin family
          Length = 1919

 Score = 44.4 bits (100), Expect = 5e-05
 Identities = 21/71 (29%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSDY 217
           ++I VK+L GK   L V   +++ +++AK   K      +  ++ + GK+L+D ++L+  
Sbjct: 661 MKIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSLAAQ 720

Query: 218 NIQKESTLHLV 250
           N+Q  S +HL+
Sbjct: 721 NVQPNSLVHLI 731


>At4g05230.1 68417.m00789 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 206

 Score = 42.7 bits (96), Expect = 1e-04
 Identities = 21/69 (30%), Positives = 36/69 (52%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           + +F +T +G T  +E+   DT+  +K KI+  + IP  +Q L+F G  L+D   +    
Sbjct: 1   MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCV 60

Query: 221 IQKESTLHL 247
           I   S + L
Sbjct: 61  ILNHSRIQL 69


>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
           bromodomain-containing protein low similarity to
           SP|P51123 Transcription initiation factor TFIID 230 kDa
           subunit {Drosophila melanogaster}; contains Pfam
           profiles: PF00439 bromodomain, PF00240: Ubiquitin family
          Length = 1700

 Score = 42.7 bits (96), Expect = 1e-04
 Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
 Frame = +2

Query: 8   FPSTFFIGATQLQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGK 184
           F S   I    ++I +  L GK   L V   +++ ++KAK   K      +  ++ + GK
Sbjct: 489 FHSAPAIKLQTMKIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGK 548

Query: 185 QLEDGRTLSDYNIQKESTLHLV 250
           +LED ++L++ N+Q  S +HL+
Sbjct: 549 ELEDEKSLAEQNVQPNSLVHLL 570


>At4g02950.1 68417.m00402 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 318

 Score = 42.3 bits (95), Expect = 2e-04
 Identities = 21/71 (29%), Positives = 38/71 (53%)
 Frame = +2

Query: 35  TQLQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 214
           T + + ++  +G + T++V   DT+  +K KI+  +G P  +Q LIF  K L+D   +  
Sbjct: 34  TMISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFG 93

Query: 215 YNIQKESTLHL 247
             I+  S + L
Sbjct: 94  CQIRHNSRILL 104


>At4g03360.1 68417.m00458 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 284

 Score = 40.7 bits (91), Expect = 6e-04
 Identities = 20/69 (28%), Positives = 38/69 (55%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
           +++ ++  +G + T++V   DT+  +K KI+  +G P  +Q LIF  K L+D   +    
Sbjct: 2   IKVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 61

Query: 221 IQKESTLHL 247
           I+  S + L
Sbjct: 62  IRHNSRILL 70


>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
           SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
           (Ras-binding protein Sur-8) {Homo sapiens}; contains
           Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
           repeat, PF00560: Leucine Rich Repeat
          Length = 897

 Score = 38.7 bits (86), Expect = 0.002
 Identities = 20/61 (32%), Positives = 35/61 (57%)
 Frame = +2

Query: 68  GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 247
           GK+I L V    T++++K+++Q    + P  Q+LIF GK L +  TL   ++   + L L
Sbjct: 544 GKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDVGSGAKLML 603

Query: 248 V 250
           +
Sbjct: 604 M 604


>At1g53980.1 68414.m06149 polyubiquitin-related contains similarity
           to polyubiquitin GI:166336 from (Aglaothamnion
           neglectum)
          Length = 91

 Score = 38.7 bits (86), Expect = 0.002
 Identities = 19/38 (50%), Positives = 25/38 (65%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 154
           + IFV TL GKT  LEV+ S+ I+ VK  I D+  +PP
Sbjct: 49  MSIFVSTLKGKTFNLEVKGSEIIQQVKNMIHDQ--VPP 84



 Score = 27.5 bits (58), Expect = 5.8
 Identities = 13/25 (52%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVE-ASDTIE 112
           ++I +KT  GKTI LE+E +S+TI+
Sbjct: 1   MKILIKTEKGKTINLELEDSSETID 25


>At4g05250.1 68417.m00793 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 318

 Score = 37.5 bits (83), Expect = 0.005
 Identities = 18/52 (34%), Positives = 30/52 (57%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 196
           + +F +T +G    +E+   DT+  +K KI+  + IP  +Q LIF G  L+D
Sbjct: 1   MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52


>At5g14360.1 68418.m01678 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 163

 Score = 36.3 bits (80), Expect = 0.013
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = +2

Query: 83  LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 196
           L +EA+ T   +K  +    G+ P QQRL+F GK+ ED
Sbjct: 83  LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120


>At4g05310.1 68417.m00809 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 415

 Score = 35.9 bits (79), Expect = 0.017
 Identities = 17/47 (36%), Positives = 28/47 (59%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 181
           ++  V+ L G +  +EVE +DT+  VK KI+  + +P  +Q LI  G
Sbjct: 1   MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47


>At4g05270.1 68417.m00797 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 129

 Score = 35.9 bits (79), Expect = 0.017
 Identities = 18/47 (38%), Positives = 27/47 (57%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 181
           ++  V+ L G +  LEV+  DT+  VK KI+  + IP  +Q LI  G
Sbjct: 1   MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47


>At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase
           family protein similar to phosphatidylinositol 4-kinase
           type-II beta [Homo sapiens] GI:20159767; contains Pfam
           profile PF00454: Phosphatidylinositol 3- and 4-kinase
          Length = 630

 Score = 35.1 bits (77), Expect = 0.029
 Identities = 18/54 (33%), Positives = 29/54 (53%)
 Frame = +2

Query: 44  QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 205
           ++FV+T TG  + LE++ SD    VK K+Q     P ++  L F    L++  T
Sbjct: 42  RVFVQTETGCVLGLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLT 95


>At5g40630.1 68418.m04932 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 165

 Score = 34.7 bits (76), Expect = 0.039
 Identities = 16/52 (30%), Positives = 29/52 (55%)
 Frame = +2

Query: 41  LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 196
           + + V T++  +  + ++A+ T   +K  I    GI   +QRL+F GK+ ED
Sbjct: 79  ISLRVSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130


>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
           domain-containing protein low similarity to NUB1
           (NEDD8-interacting protein) [Homo sapiens] GI:13383476;
           contains Pfam profile PF00627: UBA/TS-N domain
          Length = 562

 Score = 33.1 bits (72), Expect = 0.12
 Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
 Frame = +2

Query: 83  LEVEASD-TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG----RTLSDYNIQKESTL 241
           LEVE  + T+  ++ ++  + G+ P+  +LIFAGK L+D      TLS   I++ S +
Sbjct: 14  LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGIKENSKI 71


>At1g22050.1 68414.m02758 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 119

 Score = 30.3 bits (65), Expect = 0.83
 Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 13/67 (19%)
 Frame = +2

Query: 98  SDTIENVKAKI-----QDKEGIPP--DQQRLIFAGKQLEDGRTLSDYNIQ------KEST 238
           S T+ ++K K+     +DKE  P   +  +LI AGK LE+ RTL++  +          T
Sbjct: 28  SMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAESRLPVCELPGMIIT 87

Query: 239 LHLVLRL 259
           +H+VLRL
Sbjct: 88  MHIVLRL 94


>At1g47680.1 68414.m05297 hypothetical protein
          Length = 104

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +2

Query: 92  EASDTIENVKAKIQDKEG-IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 247
           E  D +E++  K  ++ G +     +L  +G+Q+   R L DY +Q E+T  L
Sbjct: 31  EEDDGMEDITKKYHNEVGEVVQGVPQLRRSGRQISQSRYLEDYVMQSETTYGL 83


>At3g46530.1 68416.m05051 disease resistance protein, RPP13-like
           (CC-NBS class), putative domain signature CC-NBS exists,
           suggestive of a disease resistance protein. Closest
           homolog in Col-0 to RPP13.
          Length = 835

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -3

Query: 175 KDETLLVWRNTFLVLDFSFDIFDSVGSFHLQ 83
           +DE    W    LVLDF++D+ D + ++HL+
Sbjct: 54  EDEVSKEWSK--LVLDFAYDVEDVLDTYHLK 82


>At1g51480.1 68414.m05794 disease resistance protein (CC-NBS-LRR
           class), putative domain signature CC-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 941

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 175 CRETIRRWPHSFRL*HPERIHTSPGFE 255
           C+ETI+ W H+  + +    H  PG E
Sbjct: 447 CKETIQEWHHAINVLNSPAGHKFPGME 473


>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
           GTP-binding protein GUF1 - Saccharomyces cerevisiae,
           PIR:S50374
          Length = 661

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = +2

Query: 62  LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 199
           +TG   T E    DTI   K  ++   G  P  + ++F+G    DG
Sbjct: 323 VTGMRTTKEARIGDTIYRTKTTVEPLPGFKP-VRHMVFSGVYPADG 367


>At4g38340.1 68417.m05420 RWP-RK domain-containing protein similar
           to nodule inception protein GI:6448579 from (Lotus
           japonicus); contains Pfam profile: PF02042 RWP-RK domain
          Length = 767

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 20/85 (23%), Positives = 40/85 (47%)
 Frame = +2

Query: 68  GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 247
           GK ++    ++ ++EN K K + ++ I  D  R  FAG   +  + +        +TL  
Sbjct: 473 GKQVSFSFSSASSLENRKRKTKAEKDITLDTLRQHFAGSLKDAAKNIG----VCPTTLKR 528

Query: 248 VLRLXGGTIEPSLRILAMKYNCXKM 322
           + R  G +  PS +I  + ++  K+
Sbjct: 529 ICRQNGISRWPSRKIKKVGHSLRKL 553


>At3g47160.1 68416.m05120 expressed protein similar to MTD2
           [Medicago truncatula] GI:9294812; supporting cDNA
           gi|25083983|gb|BT002136.1|
          Length = 245

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 308 NCXKMICRKCYARLHPRATNC 370
           NC   +C KCY   H R+ +C
Sbjct: 161 NCTHSLCIKCYRDWHGRSESC 181


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,099,319
Number of Sequences: 28952
Number of extensions: 229165
Number of successful extensions: 792
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 786
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 967280384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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