Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_A23
(897 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g27595.1 68417.m03964 protein transport protein-related low s... 36 0.048
At5g13340.1 68418.m01535 expressed protein 34 0.15
At3g53110.1 68416.m05853 DEAD/DEAH box helicase, putative RNA he... 32 0.45
At3g50370.1 68416.m05508 expressed protein 31 1.4
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 31 1.4
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 31 1.4
At4g36520.1 68417.m05185 trichohyalin-related low similarity to ... 30 1.8
At2g24420.2 68415.m02918 DNA repair ATPase-related contains 2 tr... 30 1.8
At2g24420.1 68415.m02917 DNA repair ATPase-related contains 2 tr... 30 1.8
At1g65540.1 68414.m07435 calcium-binding EF hand family protein ... 30 2.4
At5g12430.1 68418.m01461 DNAJ heat shock N-terminal domain-conta... 29 3.2
At4g25160.1 68417.m03622 protein kinase family protein contains ... 29 3.2
At1g03080.1 68414.m00282 kinase interacting family protein simil... 29 4.2
At1g29570.1 68414.m03616 zinc finger protein-related contains si... 29 5.5
At5g64600.1 68418.m08118 expressed protein similar to axi 1 [Nic... 28 7.3
At3g07740.2 68416.m00935 transcriptional adaptor (ADA2a) identic... 28 7.3
At3g07740.1 68416.m00936 transcriptional adaptor (ADA2a) identic... 28 7.3
At1g04950.2 68414.m00493 TATA box-binding protein-associated fac... 28 7.3
At1g04950.1 68414.m00492 TATA box-binding protein-associated fac... 28 7.3
At4g18240.1 68417.m02709 starch synthase-related protein contain... 28 9.7
At3g61240.2 68416.m06854 DEAD/DEAH box helicase, putative (RH12)... 28 9.7
At3g61240.1 68416.m06853 DEAD/DEAH box helicase, putative (RH12)... 28 9.7
At3g21800.1 68416.m02749 UDP-glucoronosyl/UDP-glucosyl transfera... 28 9.7
At3g10980.1 68416.m01325 expressed protein 28 9.7
At1g58210.1 68414.m06610 kinase interacting family protein simil... 28 9.7
At1g24510.2 68414.m03085 T-complex protein 1 epsilon subunit, pu... 28 9.7
At1g24510.1 68414.m03086 T-complex protein 1 epsilon subunit, pu... 28 9.7
>At4g27595.1 68417.m03964 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1212
Score = 35.5 bits (78), Expect = 0.048
Identities = 43/181 (23%), Positives = 75/181 (41%), Gaps = 10/181 (5%)
Frame = +2
Query: 245 TENKMSRSKPQW-----HLQALAAQRRDNVLRRAEELQKVAQYFEANTNKSRHHEQWTTE 409
TEN+ SK +W HL + D EEL KV ++ ++ +
Sbjct: 526 TENEFFNSKTEWEQRELHLMLCVKKLEDGNFSVQEELSKVKNLLHLKEVEACAAKEEDAK 585
Query: 410 GYYERANKEAELLRQQKI-RAAKLEERRQKLELMLFQENMQYQQELKNLSAQPKLYKNGS 586
R E E+ Q+I AK + + K L+ + + ELKN +A+ + +
Sbjct: 586 MQTNRKELEEEIKDLQEIVEVAKADSMKLKESLV------EKEDELKNTAAENRKLREME 639
Query: 587 YLNKVPTSTLQDINQGIIEKEEQLRK--HEA-ELRLHHAWRLRQ-PELRAANSYIANGKL 754
+ L + + +++KE +L+ EA ELR+ L++ EL AA + +
Sbjct: 640 VSSIDKIDQLSKVKESLVDKETKLQNIIQEAEELRVKEIDYLKKIEELSAAKESLVEKET 699
Query: 755 K 757
K
Sbjct: 700 K 700
>At5g13340.1 68418.m01535 expressed protein
Length = 242
Score = 33.9 bits (74), Expect = 0.15
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = +2
Query: 296 AAQRRDNVLRRAEELQKVAQYFEANTNKSRHHEQWTTEGYYERANKEAELLRQQKIRAAK 475
A ++ + R EEL K+ + +S+ E + E +E ELL++QK AA
Sbjct: 151 ARRKEEQARREREELDKMLEENSRRVEESQRREAMELQRKEEERYRELELLQRQKEEAA- 209
Query: 476 LEERRQKLE 502
RR+KLE
Sbjct: 210 ---RRKKLE 215
>At3g53110.1 68416.m05853 DEAD/DEAH box helicase, putative RNA
helicase, Mus musculus, PIR:I49731
Length = 496
Score = 32.3 bits (70), Expect = 0.45
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 332 EELQKVAQYFEANTNKSRHHEQWTTEGYYERANKEAELL 448
E ++K+ +YFEAN + + W +E Y+ A KEA LL
Sbjct: 459 EVMEKIEKYFEANVKEIK---SWNSEEEYKSALKEAGLL 494
>At3g50370.1 68416.m05508 expressed protein
Length = 2179
Score = 30.7 bits (66), Expect = 1.4
Identities = 23/114 (20%), Positives = 49/114 (42%)
Frame = +2
Query: 335 ELQKVAQYFEANTNKSRHHEQWTTEGYYERANKEAELLRQQKIRAAKLEERRQKLELMLF 514
EL++V + E + ++ E + L R+Q R +LEE ++
Sbjct: 472 ELERVQKMQEEERRRIIEEQERVIELARTEEEERLRLAREQDERQRRLEEEAREAAFRNE 531
Query: 515 QENMQYQQELKNLSAQPKLYKNGSYLNKVPTSTLQDINQGIIEKEEQLRKHEAE 676
QE ++ + + L + K+ ++ + Q Q ++E EE++ + +AE
Sbjct: 532 QERLEATRRAEELRKSKEEEKHRLFMEE--ERRKQAAKQKLLELEEKISRRQAE 583
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 401 TTEGYYE-RANKEAELLRQQKIRAAKLEERRQKLELMLFQENMQYQQELKNLSAQPKLYK 577
T EG R + E L ++K + E RR+ E L + QY++ L+ + + +L
Sbjct: 413 TAEGRLRARQKRNEEELEKEKRNQLEEERRRENPESYLEELQAQYKEVLERVEQKKRLKT 472
Query: 578 NGS 586
NGS
Sbjct: 473 NGS 475
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/82 (29%), Positives = 37/82 (45%)
Frame = +2
Query: 302 QRRDNVLRRAEELQKVAQYFEANTNKSRHHEQWTTEGYYERANKEAELLRQQKIRAAKLE 481
+R + R+ EE +K E K R E+ E E+A K E +++ A K E
Sbjct: 479 KREEEEARKREEERKR----EEEEAKRREEERKKREEEAEQARKREEEREKEEEMAKKRE 534
Query: 482 ERRQKLELMLFQENMQYQQELK 547
E RQ+ E + + +QE K
Sbjct: 535 EERQRKEREEVERKRREEQERK 556
>At4g36520.1 68417.m05185 trichohyalin-related low similarity to
SP|Q07283 Trichohyalin {Homo sapiens}
Length = 1400
Score = 30.3 bits (65), Expect = 1.8
Identities = 38/174 (21%), Positives = 70/174 (40%), Gaps = 2/174 (1%)
Frame = +2
Query: 206 NNRLCDHCIKRG*TENKMSRSKPQWHLQALAAQRRDNVLRRAEELQKVAQYFEANTNKSR 385
N R ++ E KM + + + LQ A ++ RR E + Q E ++R
Sbjct: 686 NERRAVEAREKAEQERKM-KEQQELELQLKEAFEKEEENRRMREAFALEQEKERRIKEAR 744
Query: 386 HHEQWTTEGYYERANKEAELLRQQKIRAAKLEERRQKLELMLFQENMQYQQELKNLSAQP 565
E+ E + A ++AEL ++ K + E+ RQ E +EN + +E+ +
Sbjct: 745 EKEE--NERRIKEAREKAELEQRLKATLEQEEKERQIKERQEREENERRAKEVLEQAENE 802
Query: 566 KLYKNG--SYLNKVPTSTLQDINQGIIEKEEQLRKHEAELRLHHAWRLRQPELR 721
+ K N+ ++ + + E + E E RL A+ + E R
Sbjct: 803 RKLKEALEQKENERRLKETREKEENKKKLREAIELEEKEKRLIEAFERAEIERR 856
>At2g24420.2 68415.m02918 DNA repair ATPase-related contains 2
transmembrane domains; similar to DNA double-strand
break repair rad50 ATPase. (Swiss-Prot:O33600)
[Sulfolobus acidocaldarius]
Length = 440
Score = 30.3 bits (65), Expect = 1.8
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Frame = +2
Query: 425 ANKEAELLRQQKIRAAKLEERRQKLELMLFQENMQYQQ-ELKNLSAQPKLYKNGSYLNKV 601
++ ELL + + RA +LE++ + L+ L Q+N + + E + + KL + S + K+
Sbjct: 103 SSDSVELLSKAQARATELEKQVEVLKKFLEQKNKEKELIEAQTSETEKKLNELNSRVEKL 162
Query: 602 PTSTLQDINQGIIEKEEQLRKHEAE-LRLHHAWRLRQPEL 718
+ + N+ I + E L+ E E LR H + EL
Sbjct: 163 HKTNEEQKNK-IRKLERALKISEEEMLRTKHEATTKAKEL 201
>At2g24420.1 68415.m02917 DNA repair ATPase-related contains 2
transmembrane domains; similar to DNA double-strand
break repair rad50 ATPase. (Swiss-Prot:O33600)
[Sulfolobus acidocaldarius]
Length = 440
Score = 30.3 bits (65), Expect = 1.8
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Frame = +2
Query: 425 ANKEAELLRQQKIRAAKLEERRQKLELMLFQENMQYQQ-ELKNLSAQPKLYKNGSYLNKV 601
++ ELL + + RA +LE++ + L+ L Q+N + + E + + KL + S + K+
Sbjct: 103 SSDSVELLSKAQARATELEKQVEVLKKFLEQKNKEKELIEAQTSETEKKLNELNSRVEKL 162
Query: 602 PTSTLQDINQGIIEKEEQLRKHEAE-LRLHHAWRLRQPEL 718
+ + N+ I + E L+ E E LR H + EL
Sbjct: 163 HKTNEEQKNK-IRKLERALKISEEEMLRTKHEATTKAKEL 201
>At1g65540.1 68414.m07435 calcium-binding EF hand family protein
similar to leucine zipper-EF-hand containing
transmembrane protein 1 [Homo sapiens] GI:4235226;
contains Pfam profile PF00036: EF hand
Length = 736
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Frame = +2
Query: 476 LEERRQKLELMLFQENMQYQQELKNLSAQPKLYKNGS-----YLNKVPTSTLQDINQGII 640
+ ER++KLE + QE + ++E + K+ ++ S L+++ ST +D N+
Sbjct: 491 VSERKRKLEYLEMQEELIKEEEEEEEEEMAKMKESASSQKDVALDEMMASTAKDANEQ-- 548
Query: 641 EKEEQLRKHEAELRLHHA 694
K + L KHE L A
Sbjct: 549 AKAKTLEKHEQLCELSRA 566
>At5g12430.1 68418.m01461 DNAJ heat shock N-terminal domain-containing
protein similarity to TETRATRICOPEPTIDE REPEAT PROTEIN 2
, human, SWISSPROT:TTC2_HUMAN; contains Pfam profiles
PF00226: DnaJ domain, PF00515: TPR Domain
Length = 1165
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/67 (25%), Positives = 30/67 (44%)
Frame = +2
Query: 296 AAQRRDNVLRRAEELQKVAQYFEANTNKSRHHEQWTTEGYYERANKEAELLRQQKIRAAK 475
A RR + + + A E N + T G +R+ + +RQ +IR ++
Sbjct: 953 AISRRATLFEMIRDYGQAASDMERYVNILTKQMEEKTSGTLDRSTSMSNDIRQARIRLSE 1012
Query: 476 LEERRQK 496
LEE+ +K
Sbjct: 1013 LEEKSRK 1019
>At4g25160.1 68417.m03622 protein kinase family protein contains
Pfam profile: PF00069 Eukaryotic protein kinase domain
Length = 835
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +2
Query: 335 ELQKVAQYFEANTNKSRHHEQWTTEGYYERANKEAELLRQQKIRAAKLEERRQKLELMLF 514
E +++A+ + N K+R E ERA +E R+ + ++A+ + ++KLE L
Sbjct: 404 EARELAEKEKQNFEKARRD----AESMRERAEREIAQRREAERKSARDTKEKEKLEGTLG 459
Query: 515 QENMQYQ 535
+QYQ
Sbjct: 460 SPQLQYQ 466
>At1g03080.1 68414.m00282 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1744
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/74 (27%), Positives = 33/74 (44%)
Frame = +2
Query: 473 KLEERRQKLELMLFQENMQYQQELKNLSAQPKLYKNGSYLNKVPTSTLQDINQGIIEKEE 652
KL E LE LF N+ EL+ L ++ K + +L +TL + ++ +
Sbjct: 731 KLSEENMVLENSLFNANV----ELEELKSKLKSLEESCHLLNDDKTTLTSERESLLSHID 786
Query: 653 QLRKHEAELRLHHA 694
+RK +L HA
Sbjct: 787 TMRKRIEDLEKEHA 800
>At1g29570.1 68414.m03616 zinc finger protein-related contains
similarity to zinc finger proteins (CCCH type)
Length = 321
Score = 28.7 bits (61), Expect = 5.5
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Frame = +2
Query: 275 QWHLQALAAQRRDNVLRRAEELQKVAQYFEANTNKSRHHEQWTTE----GYYERANKEA- 439
+W + +R + R AEE + + ++ + R E+ E ER +EA
Sbjct: 165 EWRFERERMERIERQRREAEENLQEQRQRDSIERQRREAEENLQEQRQRDSIERQRREAQ 224
Query: 440 ELLRQQKIRAAKLEERRQKLELMLFQENMQYQQELKNLSAQPKL 571
E L+QQ+ R + +E +R++ + L Q+ +Q E N+ Q L
Sbjct: 225 ENLQQQRQRDS-IERQRREAQENLQQQRLQDMPENHNVDDQQNL 267
>At5g64600.1 68418.m08118 expressed protein similar to axi 1
[Nicotiana tabacum] GI:559921; contains Pfam profile
PF03138: Plant protein family
Length = 522
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/91 (21%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +2
Query: 323 RRAEELQKVAQYFEANTNKSRHHEQWTTEGYYERANKEAELLRQQK-IRAAKLEERRQKL 499
R + ++K+ + E+ +H W++ GYYE + L ++ K I AK + R
Sbjct: 182 RDVKVIKKLPKEVESLPRARKHFTSWSSVGYYE---EMTHLWKEYKVIHVAKSDSRLANN 238
Query: 500 ELMLFQENMQYQQELKNLSAQPKLYKNGSYL 592
+L + + ++ + + L P + G L
Sbjct: 239 DLPIDVQRLRCRVLYRGLCFSPAIESLGQKL 269
>At3g07740.2 68416.m00935 transcriptional adaptor (ADA2a) identical
to transcriptional adaptor ADA2a [Arabidopsis thaliana]
gi|13591698|gb|AAK31319
Length = 477
Score = 28.3 bits (60), Expect = 7.3
Identities = 23/99 (23%), Positives = 55/99 (55%), Gaps = 6/99 (6%)
Frame = +2
Query: 392 EQWTTEGYYERANKEAEL---LRQQKIRAAKLEERRQKLELMLFQENMQY--QQELKNLS 556
EQ + ++ ++ +AE L+ +I + +L+ER+++ E +L + N+ Y Q E+ +
Sbjct: 220 EQLLADMEFKDSDTDAEREQKLQVLRIYSKRLDERKRRKEFVL-ERNLLYPDQYEMSLSA 278
Query: 557 AQPKLYKNGSYLNKVPT-STLQDINQGIIEKEEQLRKHE 670
+ K+YK+ + + +++ + +IE+ + LR+ E
Sbjct: 279 EERKIYKSCKVFARFQSKEEHKELIKKVIEEHQILRRIE 317
>At3g07740.1 68416.m00936 transcriptional adaptor (ADA2a) identical
to transcriptional adaptor ADA2a [Arabidopsis thaliana]
gi|13591698|gb|AAK31319
Length = 548
Score = 28.3 bits (60), Expect = 7.3
Identities = 23/99 (23%), Positives = 55/99 (55%), Gaps = 6/99 (6%)
Frame = +2
Query: 392 EQWTTEGYYERANKEAEL---LRQQKIRAAKLEERRQKLELMLFQENMQY--QQELKNLS 556
EQ + ++ ++ +AE L+ +I + +L+ER+++ E +L + N+ Y Q E+ +
Sbjct: 291 EQLLADMEFKDSDTDAEREQKLQVLRIYSKRLDERKRRKEFVL-ERNLLYPDQYEMSLSA 349
Query: 557 AQPKLYKNGSYLNKVPT-STLQDINQGIIEKEEQLRKHE 670
+ K+YK+ + + +++ + +IE+ + LR+ E
Sbjct: 350 EERKIYKSCKVFARFQSKEEHKELIKKVIEEHQILRRIE 388
>At1g04950.2 68414.m00493 TATA box-binding protein-associated factor
(TAF) family protein contains Pfam profile: PF02969 TATA
box binding protein associated factor
Length = 549
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +2
Query: 635 IIEKEEQLRKHEAELRLHHAWRLRQPELRAANSYIANGKLK 757
++E E K + +++++ AWR+ LRAA I +G+LK
Sbjct: 354 LLEPELNAEKQKNQMKIYEAWRVYGALLRAAGLCI-HGRLK 393
>At1g04950.1 68414.m00492 TATA box-binding protein-associated factor
(TAF) family protein contains Pfam profile: PF02969 TATA
box binding protein associated factor
Length = 549
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +2
Query: 635 IIEKEEQLRKHEAELRLHHAWRLRQPELRAANSYIANGKLK 757
++E E K + +++++ AWR+ LRAA I +G+LK
Sbjct: 354 LLEPELNAEKQKNQMKIYEAWRVYGALLRAAGLCI-HGRLK 393
>At4g18240.1 68417.m02709 starch synthase-related protein contains
similarity to starch synthase GI:4582783 from [Vigna
unguiculata]
Length = 1040
Score = 27.9 bits (59), Expect = 9.7
Identities = 31/143 (21%), Positives = 66/143 (46%), Gaps = 13/143 (9%)
Frame = +2
Query: 311 DNVLRRAEELQKVAQYFEANTNKSRHHEQWTTEG--YYERANKEAELLRQQKIRAAKLEE 484
D ++AE+ V Q + NK E+ E Y E + K + + + LEE
Sbjct: 366 DRATKQAEQAVIVLQQNQDLRNKVDKIEESLKEANVYKESSEKIQQYNELMQHKVTLLEE 425
Query: 485 RRQKLE------LMLFQENM-QYQQELKNLSAQPKLYKNGSYLNKVP----TSTLQDINQ 631
R +K + + L+QE++ ++Q+ L++L + K ++ +P + L ++
Sbjct: 426 RLEKSDAEIFSYVQLYQESIKEFQETLESLKEESKKKSRDEPVDDMPWDYWSRLLLTVDG 485
Query: 632 GIIEKEEQLRKHEAELRLHHAWR 700
++EK ++ ++A+L W+
Sbjct: 486 WLLEK--KIASNDADLLRDMVWK 506
>At3g61240.2 68416.m06854 DEAD/DEAH box helicase, putative (RH12)
identical to cDNA DEAD box RNA helicase, RH12 GI:3776000
Length = 498
Score = 27.9 bits (59), Expect = 9.7
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Frame = +2
Query: 368 NTNKSRHHEQ-WTTEGYYERANKEAELLRQQKIRAAKLEER--RQKLELMLFQENMQYQQ 538
NTN+ R+ T G + +QQ + + +R Q + M Q+ Q QQ
Sbjct: 2 NTNRGRYPPGVGTGRGAPPNPDYHQSYRQQQPPQDQQYVQRGYSQNPQQMQLQQQHQQQQ 61
Query: 539 ELKNLSAQPKLYKNGSYLNKVPTSTLQ 619
+ + S +P+L N S N+V T Q
Sbjct: 62 QQQQWSRRPQLPGNASNANEVVQQTTQ 88
>At3g61240.1 68416.m06853 DEAD/DEAH box helicase, putative (RH12)
identical to cDNA DEAD box RNA helicase, RH12 GI:3776000
Length = 498
Score = 27.9 bits (59), Expect = 9.7
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Frame = +2
Query: 368 NTNKSRHHEQ-WTTEGYYERANKEAELLRQQKIRAAKLEER--RQKLELMLFQENMQYQQ 538
NTN+ R+ T G + +QQ + + +R Q + M Q+ Q QQ
Sbjct: 2 NTNRGRYPPGVGTGRGAPPNPDYHQSYRQQQPPQDQQYVQRGYSQNPQQMQLQQQHQQQQ 61
Query: 539 ELKNLSAQPKLYKNGSYLNKVPTSTLQ 619
+ + S +P+L N S N+V T Q
Sbjct: 62 QQQQWSRRPQLPGNASNANEVVQQTTQ 88
>At3g21800.1 68416.m02749 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 480
Score = 27.9 bits (59), Expect = 9.7
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 4/94 (4%)
Frame = +3
Query: 123 IYCEEVILTIRMTSHTPITVRCRR----PHYAITVYAIIASKEVERRTRCPAPNHNGIYR 290
+Y E+ M + V+ R+ T I+ ++E+ER RC + + R
Sbjct: 386 LYAEQKFNAFVMVEELGLAVKIRKYWRGDQLVGTATVIVTAEEIERGIRCLMEQDSDV-R 444
Query: 291 HWLHNVETMCSVALKSFKKWLSTLKPILINQDTT 392
+ + + C +ALK S LK L QD T
Sbjct: 445 NRVKEMSKKCHMALKDGGSSQSALK--LFIQDVT 476
>At3g10980.1 68416.m01325 expressed protein
Length = 557
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -1
Query: 537 CWYCIFSWNNISSSFWRLSSNFAALIFCCL 448
C +C+F WN F + + A I CL
Sbjct: 350 CTFCVFGWNMERVGFGNMYVHIATFILFCL 379
>At1g58210.1 68414.m06610 kinase interacting family protein similar to
kinase interacting protein 1 (GI:13936326) {Petunia
integrifolia}
Length = 1246
Score = 27.9 bits (59), Expect = 9.7
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +2
Query: 272 PQW-HLQALAAQRRDNVLRRAEELQKVAQYFEANTNKSRHHEQWTTEGYYERANKEAELL 448
P W HL + R+ VL +E V + + K E+ EG++E A + EL
Sbjct: 843 PNWRHLLPDGMEDREKVL--LDEYTSVLRDYREVKRKLGDVEKKNREGFFELALQLRELK 900
Query: 449 RQQKIRAAKLEERRQKLE 502
+ +++ RQKL+
Sbjct: 901 NAVAYKDVEIQSLRQKLD 918
>At1g24510.2 68414.m03085 T-complex protein 1 epsilon subunit,
putative / TCP-1-epsilon, putative / chaperonin,
putative identical to SWISS-PROT:O04450- T-complex
protein 1, epsilon subunit (TCP-1-epsilon) [Arabidopsis
thaliana]; strong similarity to SP|P54411 T-complex
protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon)
(TCP-K36) {Avena sativa}; contains Pfam:PF00118 domain,
TCP-1/cpn60 chaperonin family
Length = 459
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 132 EEVILTIRMTSHTPITVRCRRPHYAITVYAIIASKEVERR 251
E ++ T T + I RC+R I V A++A ++ERR
Sbjct: 83 EPLVQTCMTTLSSKIVNRCKRSLAEIAVKAVLAVADLERR 122
>At1g24510.1 68414.m03086 T-complex protein 1 epsilon subunit,
putative / TCP-1-epsilon, putative / chaperonin,
putative identical to SWISS-PROT:O04450- T-complex
protein 1, epsilon subunit (TCP-1-epsilon) [Arabidopsis
thaliana]; strong similarity to SP|P54411 T-complex
protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon)
(TCP-K36) {Avena sativa}; contains Pfam:PF00118 domain,
TCP-1/cpn60 chaperonin family
Length = 535
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 132 EEVILTIRMTSHTPITVRCRRPHYAITVYAIIASKEVERR 251
E ++ T T + I RC+R I V A++A ++ERR
Sbjct: 159 EPLVQTCMTTLSSKIVNRCKRSLAEIAVKAVLAVADLERR 198
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,195,441
Number of Sequences: 28952
Number of extensions: 313225
Number of successful extensions: 1058
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1057
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2110422216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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