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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0034
         (693 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden...   364   e-101
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden...   361   e-100
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden...   361   e-100
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden...   359   e-100
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near...   359   1e-99
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near...   359   1e-99
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden...   358   2e-99
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t...   357   4e-99
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide...   356   7e-99
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne...   188   3e-48
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne...   188   3e-48
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide...   186   1e-47
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide...   186   1e-47
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide...   184   4e-47
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id...   184   7e-47
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne...   184   7e-47
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin...   145   2e-35
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin...   145   3e-35
At4g37190.1 68417.m05265 expressed protein                             33   0.18 
At2g31580.1 68415.m03858 expressed protein   contains Pfam profi...    30   1.3  
At1g09530.2 68414.m01069 phytochrome interacting factor 3 (PIF3)...    29   2.9  
At1g09530.1 68414.m01068 phytochrome interacting factor 3 (PIF3)...    29   2.9  
At5g23395.1 68418.m02738 expressed protein                             29   3.9  
At2g28400.1 68415.m03451 expressed protein contains Pfam profile...    29   3.9  
At3g19320.1 68416.m02450 leucine-rich repeat family protein cont...    28   5.1  
At3g62910.1 68416.m07067 peptide chain release factor, putative ...    28   6.8  
At3g05260.1 68416.m00574 short-chain dehydrogenase/reductase (SD...    28   6.8  
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati...    27   8.9  

>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
           identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
           thaliana}
          Length = 447

 Score =  364 bits (895), Expect = e-101
 Identities = 165/212 (77%), Positives = 183/212 (86%), Gaps = 1/212 (0%)
 Frame = +2

Query: 59  MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 235
           MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+Y
Sbjct: 1   MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60

Query: 236 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 415
           VPRA+L+DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61  VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120

Query: 416 VRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTV 595
           VRKE+E+CDCLQGFQ                   KIREEYPDR+M T+SV PSPKVSDTV
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180

Query: 596 VEPYNATLSVHQLVENTDETYCIDNEALYDIC 691
           VEPYNATLSVHQLVEN DE   +DNEALYDIC
Sbjct: 181 VEPYNATLSVHQLVENADECMVLDNEALYDIC 212


>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
           identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
           thaliana}
          Length = 449

 Score =  361 bits (887), Expect = e-100
 Identities = 163/211 (77%), Positives = 181/211 (85%)
 Frame = +2

Query: 59  MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 238
           MREI+H+Q GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YV
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60

Query: 239 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 418
           PRAIL+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVV
Sbjct: 61  PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120

Query: 419 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 598
           RKE+E+CDCLQGFQ                   KIREEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 599 EPYNATLSVHQLVENTDETYCIDNEALYDIC 691
           EPYNATLSVHQLVEN DE   +DNEALYDIC
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDIC 211


>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
           identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
           thaliana}
          Length = 449

 Score =  361 bits (887), Expect = e-100
 Identities = 165/212 (77%), Positives = 181/212 (85%), Gaps = 1/212 (0%)
 Frame = +2

Query: 59  MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 235
           MREI+H+Q GQCGNQIG+KFWE+I DEHGID TG Y GD+ DLQLERINVYYNEASGG+Y
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60

Query: 236 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 415
           VPRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61  VPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120

Query: 416 VRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTV 595
           VRKE+E+CDCLQGFQ                   KIREEYPDR+M T+SV PSPKVSDTV
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180

Query: 596 VEPYNATLSVHQLVENTDETYCIDNEALYDIC 691
           VEPYNATLSVHQLVEN DE   +DNEALYDIC
Sbjct: 181 VEPYNATLSVHQLVENADECMVLDNEALYDIC 212


>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
           identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
           thaliana}
          Length = 444

 Score =  359 bits (884), Expect = e-100
 Identities = 165/211 (78%), Positives = 179/211 (84%)
 Frame = +2

Query: 59  MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 238
           MREI+H+Q GQCGNQIGAKFWE+I  EHGID TG   GD+DLQLERINVY+NEASGGKYV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60

Query: 239 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 418
           PRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 419 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 598
           RKE+E+CDCLQGFQ                   KIREEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180

Query: 599 EPYNATLSVHQLVENTDETYCIDNEALYDIC 691
           EPYNATLSVHQLVEN DE   +DNEALYDIC
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDIC 211


>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
           identical to SP|P29512 Tubulin beta-2/beta-3 chain
           {Arabidopsis thaliana}
          Length = 450

 Score =  359 bits (882), Expect = 1e-99
 Identities = 163/211 (77%), Positives = 179/211 (84%)
 Frame = +2

Query: 59  MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 238
           MREI+H+Q GQCGNQIGAKFWE++  EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60

Query: 239 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 418
           PRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 419 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 598
           RKE+E+CDCLQGFQ                   KIREEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 599 EPYNATLSVHQLVENTDETYCIDNEALYDIC 691
           EPYNATLSVHQLVEN DE   +DNEALYDIC
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDIC 211


>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
           identical to SP|P29512 Tubulin beta-2/beta-3 chain
           {Arabidopsis thaliana}
          Length = 450

 Score =  359 bits (882), Expect = 1e-99
 Identities = 163/211 (77%), Positives = 179/211 (84%)
 Frame = +2

Query: 59  MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 238
           MREI+H+Q GQCGNQIGAKFWE++  EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60

Query: 239 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 418
           PRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 419 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 598
           RKE+E+CDCLQGFQ                   KIREEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 599 EPYNATLSVHQLVENTDETYCIDNEALYDIC 691
           EPYNATLSVHQLVEN DE   +DNEALYDIC
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDIC 211


>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
           identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
           thaliana}
          Length = 444

 Score =  358 bits (880), Expect = 2e-99
 Identities = 165/211 (78%), Positives = 179/211 (84%)
 Frame = +2

Query: 59  MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 238
           MREI+H+Q GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60

Query: 239 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 418
           PRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 419 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 598
           RKE+E+ DCLQGFQ                   KIREEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180

Query: 599 EPYNATLSVHQLVENTDETYCIDNEALYDIC 691
           EPYNATLSVHQLVEN DE   +DNEALYDIC
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDIC 211


>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
           GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
           thaliana}
          Length = 449

 Score =  357 bits (878), Expect = 4e-99
 Identities = 162/211 (76%), Positives = 180/211 (85%)
 Frame = +2

Query: 59  MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 238
           MREI+H+Q GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YV
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60

Query: 239 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 418
           PRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 419 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 598
           RKE+E+CDCLQGFQ                   KIREEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180

Query: 599 EPYNATLSVHQLVENTDETYCIDNEALYDIC 691
           EPYNATLSVHQLVEN DE   +DNEALYDIC
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDIC 211


>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
           identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
           thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
          Length = 449

 Score =  356 bits (876), Expect = 7e-99
 Identities = 161/211 (76%), Positives = 179/211 (84%)
 Frame = +2

Query: 59  MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 238
           MREI+H+Q GQCGNQIGAKFWE++  EHGID TG Y G++DLQLER+NVYYNEAS G++V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60

Query: 239 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 418
           PRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 419 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 598
           RKE+E+CDCLQGFQ                   KIREEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 599 EPYNATLSVHQLVENTDETYCIDNEALYDIC 691
           EPYNATLSVHQLVEN DE   +DNEALYDIC
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDIC 211


>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
           nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
           chain {Arabidopsis thaliana}
          Length = 450

 Score =  188 bits (458), Expect = 3e-48
 Identities = 88/213 (41%), Positives = 127/213 (59%), Gaps = 2/213 (0%)
 Frame = +2

Query: 59  MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 232
           MREI+ +  GQ G Q+G   WE+   EHGI P G    D+ + +  +  N +++E   GK
Sbjct: 1   MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60

Query: 233 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 412
           +VPRA+ VDLEP  +D VR+G + Q+F P+  + G+  A NN+A+GHYT G E+VD  LD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120

Query: 413 VVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDT 592
            VRK +++C  LQGF                    ++  +Y  +    +++ PSP+VS  
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180

Query: 593 VVEPYNATLSVHQLVENTDETYCIDNEALYDIC 691
           VVEPYN+ LS H L+E+TD    +DNEA+YDIC
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDIC 213


>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
           nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
           chain {Arabidopsis thaliana}
          Length = 450

 Score =  188 bits (458), Expect = 3e-48
 Identities = 88/213 (41%), Positives = 127/213 (59%), Gaps = 2/213 (0%)
 Frame = +2

Query: 59  MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 232
           MREI+ +  GQ G Q+G   WE+   EHGI P G    D+ + +  +  N +++E   GK
Sbjct: 1   MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60

Query: 233 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 412
           +VPRA+ VDLEP  +D VR+G + Q+F P+  + G+  A NN+A+GHYT G E+VD  LD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120

Query: 413 VVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDT 592
            VRK +++C  LQGF                    ++  +Y  +    +++ PSP+VS  
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180

Query: 593 VVEPYNATLSVHQLVENTDETYCIDNEALYDIC 691
           VVEPYN+ LS H L+E+TD    +DNEA+YDIC
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDIC 213


>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
           identical to SP|P29511 Tubulin alpha-6 chain
           {Arabidopsis thaliana}
          Length = 450

 Score =  186 bits (453), Expect = 1e-47
 Identities = 88/213 (41%), Positives = 127/213 (59%), Gaps = 2/213 (0%)
 Frame = +2

Query: 59  MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 232
           MRE + +  GQ G Q+G   WE+   EHGI P G   GD  +    +  N +++E   GK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60

Query: 233 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 412
           +VPRA+ VDLEP  +D VR+G + Q+F P+  + G+  A NN+A+GHYT G E+VD  LD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 413 VVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDT 592
            +RK +++C  LQGF                    ++  +Y  +    ++V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 593 VVEPYNATLSVHQLVENTDETYCIDNEALYDIC 691
           VVEPYN+ LS H L+E+TD +  +DNEA+YDIC
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDIC 213


>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
           identical to SP|P29511 Tubulin alpha-6 chain
           {Arabidopsis thaliana}
          Length = 427

 Score =  186 bits (453), Expect = 1e-47
 Identities = 88/213 (41%), Positives = 127/213 (59%), Gaps = 2/213 (0%)
 Frame = +2

Query: 59  MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 232
           MRE + +  GQ G Q+G   WE+   EHGI P G   GD  +    +  N +++E   GK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60

Query: 233 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 412
           +VPRA+ VDLEP  +D VR+G + Q+F P+  + G+  A NN+A+GHYT G E+VD  LD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 413 VVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDT 592
            +RK +++C  LQGF                    ++  +Y  +    ++V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 593 VVEPYNATLSVHQLVENTDETYCIDNEALYDIC 691
           VVEPYN+ LS H L+E+TD +  +DNEA+YDIC
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDIC 213


>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
           identical to SP|P11139 Tubulin alpha-1 chain
           {Arabidopsis thaliana}
          Length = 450

 Score =  184 bits (449), Expect = 4e-47
 Identities = 85/213 (39%), Positives = 128/213 (60%), Gaps = 2/213 (0%)
 Frame = +2

Query: 59  MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 232
           MREI+ +  GQ G Q+G   WE+   EHGI P G    DS +    +  N +++E S G+
Sbjct: 1   MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60

Query: 233 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 412
           +VPRA+ +DLEP  +D VR+G + Q+F P+  + G+  A NN+A+GHYT G E+VD+ L+
Sbjct: 61  HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120

Query: 413 VVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDT 592
            +RK +++C  LQGF                    ++  ++  +    +++ PSP+VS  
Sbjct: 121 RLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTA 180

Query: 593 VVEPYNATLSVHQLVENTDETYCIDNEALYDIC 691
           VVEPYN+ LS H L+E+TD    +DNEA+YDIC
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDIC 213


>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
           identical to tubulin alpha-2/alpha-4 chain SP|P29510
           GB:P29510 from [Arabidopsis thaliana]
          Length = 450

 Score =  184 bits (447), Expect = 7e-47
 Identities = 87/213 (40%), Positives = 126/213 (59%), Gaps = 2/213 (0%)
 Frame = +2

Query: 59  MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 232
           MRE + +  GQ G Q+G   WE+   EHGI P G    D  +    +  N +++E   GK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 233 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 412
           +VPRA+ VDLEP  +D VR+G + Q+F P+  + G+  A NN+A+GHYT G E+VD  LD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 413 VVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDT 592
            +RK +++C  LQGF                    ++  +Y  +    ++V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 593 VVEPYNATLSVHQLVENTDETYCIDNEALYDIC 691
           VVEPYN+ LS H L+E+TD +  +DNEA+YDIC
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDIC 213


>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
           nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
           chain from [Arabidopsis thaliana]
          Length = 450

 Score =  184 bits (447), Expect = 7e-47
 Identities = 87/213 (40%), Positives = 126/213 (59%), Gaps = 2/213 (0%)
 Frame = +2

Query: 59  MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 232
           MRE + +  GQ G Q+G   WE+   EHGI P G    D  +    +  N +++E   GK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 233 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 412
           +VPRA+ VDLEP  +D VR+G + Q+F P+  + G+  A NN+A+GHYT G E+VD  LD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 413 VVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDT 592
            +RK +++C  LQGF                    ++  +Y  +    ++V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 593 VVEPYNATLSVHQLVENTDETYCIDNEALYDIC 691
           VVEPYN+ LS H L+E+TD +  +DNEA+YDIC
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDIC 213


>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
           (TUBG2) identical to  SP|P38558 Tubulin gamma-2 chain
           (Gamma-2 tubulin) {Arabidopsis thaliana}
          Length = 474

 Score =  145 bits (352), Expect = 2e-35
 Identities = 71/209 (33%), Positives = 117/209 (55%), Gaps = 3/209 (1%)
 Frame = +2

Query: 62  REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 241
           REI+ LQ GQCGNQIG +FW+ +  EHGI   G     +    +R +V++ +A    Y+P
Sbjct: 3   REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62

Query: 242 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 415
           RA+L+DLEP  ++ +++G +  ++  +N        GAGNNWA G Y +G  + + ++D+
Sbjct: 63  RALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDM 121

Query: 416 VRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP-KVSDT 592
           + +E++  D L+GF                     + + Y  +++ TYSV P+  + SD 
Sbjct: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDV 181

Query: 593 VVEPYNATLSVHQLVENTDETYCIDNEAL 679
           VV+PYN+ L++ +L  N D    +DN AL
Sbjct: 182 VVQPYNSLLTLKRLTLNADCVVVLDNTAL 210


>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
           (TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
           (Gamma-1 tubulin) {Arabidopsis thaliana}
          Length = 474

 Score =  145 bits (351), Expect = 3e-35
 Identities = 71/209 (33%), Positives = 117/209 (55%), Gaps = 3/209 (1%)
 Frame = +2

Query: 62  REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 241
           REI+ LQ GQCGNQIG +FW+ +  EHGI   G     +    +R +V++ +A    Y+P
Sbjct: 3   REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62

Query: 242 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 415
           RA+L+DLEP  ++ +++G +  ++  +N        GAGNNWA G Y +G  + + ++D+
Sbjct: 63  RALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDM 121

Query: 416 VRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP-KVSDT 592
           + +E++  D L+GF                     + + Y  +++ TYSV P+  + SD 
Sbjct: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDV 181

Query: 593 VVEPYNATLSVHQLVENTDETYCIDNEAL 679
           VV+PYN+ L++ +L  N D    +DN AL
Sbjct: 182 VVQPYNSLLTLKRLTLNADCVVVLDNTAL 210


>At4g37190.1 68417.m05265 expressed protein
          Length = 562

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
 Frame = +2

Query: 59  MREIVHLQAGQCGNQIGAKFWEIISDEHGI--DP-TGAYHGDSDLQLERINVYYNEASG- 226
           MREIV +Q G+  N +G+ FW    +  G+  DP +     + +L ++ +        G 
Sbjct: 1   MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGV 60

Query: 227 GKYVPRAILVDLEP--GTMDS 283
             Y PR + V+L+   GTM S
Sbjct: 61  ATYTPRLVSVNLKGALGTMSS 81


>At2g31580.1 68415.m03858 expressed protein   contains Pfam profile:
           PF04446 family of unknown function (DUF549)
          Length = 567

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 22/71 (30%), Positives = 32/71 (45%)
 Frame = +2

Query: 392 LVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVP 571
           +++SV  VVRKE+E+C+CLQ F                      RE   D   + Y  V 
Sbjct: 1   MINSV-GVVRKEAENCNCLQVF--FVSGSFKVDSVEAKKKEENFRETLRDMANSKYEYVK 57

Query: 572 SPKVSDTVVEP 604
           S ++ D V+ P
Sbjct: 58  SFELEDEVMLP 68


>At1g09530.2 68414.m01069 phytochrome interacting factor 3 (PIF3)
           identical to phytochrome interacting factor 3 (PIF3)
           GI:3929585 from [Arabidopsis thaliana]
          Length = 524

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
 Frame = -3

Query: 364 GPVVAGAGLSENEVVRTEDLSERSRADRVHG--AGLQVDEDGAGHVLAAGGF--IVVYID 197
           GP   G G   +      +LSER R DR++     LQ        V  A      + Y+ 
Sbjct: 331 GPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 390

Query: 196 ALQLQVRVPMVGTG 155
           +LQLQV++  + +G
Sbjct: 391 SLQLQVQIMSMASG 404


>At1g09530.1 68414.m01068 phytochrome interacting factor 3 (PIF3)
           identical to phytochrome interacting factor 3 (PIF3)
           GI:3929585 from [Arabidopsis thaliana]
          Length = 524

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
 Frame = -3

Query: 364 GPVVAGAGLSENEVVRTEDLSERSRADRVHG--AGLQVDEDGAGHVLAAGGF--IVVYID 197
           GP   G G   +      +LSER R DR++     LQ        V  A      + Y+ 
Sbjct: 331 GPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 390

Query: 196 ALQLQVRVPMVGTG 155
           +LQLQV++  + +G
Sbjct: 391 SLQLQVQIMSMASG 404


>At5g23395.1 68418.m02738 expressed protein
          Length = 162

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +3

Query: 300 SDRSSVRTTSFSDSPAPATTGPRDT 374
           SD +S+ TT+ +++P P+   PRD+
Sbjct: 6   SDENSIPTTTTTNTPPPSANSPRDS 30


>At2g28400.1 68415.m03451 expressed protein contains Pfam profile
           PF04520: Protein of unknown function, DUF584
          Length = 162

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +1

Query: 58  NEGNRSSTGRPMW*PDWS*VLGDHLRRAR 144
           ++  ++++  P+  PDWS +LGD  RR R
Sbjct: 68  SDSGKAASSLPVNVPDWSKILGDESRRQR 96


>At3g19320.1 68416.m02450 leucine-rich repeat family protein
           contains leucine-rich repeats, Pfam:PF00560;
          Length = 493

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -2

Query: 368 PWPSCCRRRTVRKRSCPDGRSVRKVPSGQSP 276
           PW   C +  +RK+SCP+ +S   +P G+ P
Sbjct: 434 PWE--CAKFFLRKQSCPNFKSFFYLPCGKDP 462


>At3g62910.1 68416.m07067 peptide chain release factor, putative
           similar to peptide chain release factor 1 [Escherichia
           coli] GI:147567; contains Pfam profiles PF00472:
           Peptidyl-tRNA hydrolase domain, PF03462: PCRF domain
          Length = 422

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
 Frame = -2

Query: 416 LHRGP----SQRAQHPLCSVPWPSCCRRRTVRKRSCPDGRSVRKVPSGQSPW 273
           LH  P    S+++   +C V WP    RRT R     +   +RK+ S +  W
Sbjct: 17  LHSSPFTLRSRKSPSGVCLVSWPPSRSRRTRRLVCMAEPYLIRKMESVEKTW 68


>At3g05260.1 68416.m00574 short-chain dehydrogenase/reductase (SDR)
           family protein contains INTERPRO family IPR002198
           short-chain dehydrogenase/reductase (SDR) superfamily
          Length = 289

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
 Frame = +3

Query: 429 QNLAIAYRASNLHIPSVAAPGPVWAP----SSSQRSVKSTPTES*THTQ*SP---RPKYQ 587
           + LA+      + +  VA PGPVW P    S S+ ++K   +E+       P    P Y 
Sbjct: 205 RGLALQLAPKGIRVNGVA-PGPVWTPLIPASFSEEAIKQFGSETPMKRAAQPVEVAPSYV 263

Query: 588 TLSSNH 605
            L+ NH
Sbjct: 264 FLACNH 269


>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
           similar to (1-4)-beta-mannan endohydrolase [Coffea
           arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
           GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
           profile PF00150: Cellulase (glycosyl hydrolase family 5)
          Length = 408

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +2

Query: 65  EIVHLQAGQCGNQIGAKFWEIISD 136
           +I++  A + G+  GA FWE+IS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,985,456
Number of Sequences: 28952
Number of extensions: 335210
Number of successful extensions: 1081
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1477286152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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