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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0009
         (687 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro...    40   0.001
At1g16610.2 68414.m01990 arginine/serine-rich protein, putative ...    36   0.019
At1g16610.1 68414.m01989 arginine/serine-rich protein, putative ...    36   0.019
At2g05510.1 68415.m00583 glycine-rich protein                          35   0.058
At1g61255.1 68414.m06903 expressed protein                             35   0.058
At1g02840.3 68414.m00246 pre-mRNA splicing factor SF2 (SF2) / SR...    34   0.077
At1g02840.2 68414.m00244 pre-mRNA splicing factor SF2 (SF2) / SR...    34   0.077
At1g02840.1 68414.m00245 pre-mRNA splicing factor SF2 (SF2) / SR...    34   0.077
At1g27710.1 68414.m03387 glycine-rich protein                          33   0.13 
At2g15780.1 68415.m01809 glycine-rich protein similar to Blue co...    33   0.23 
At5g61660.1 68418.m07736 glycine-rich protein                          32   0.31 
At5g46730.1 68418.m05757 glycine-rich protein                          32   0.41 
At5g40490.1 68418.m04910 RNA recognition motif (RRM)-containing ...    32   0.41 
At2g05440.2 68415.m00575 glycine-rich protein                          32   0.41 
At5g58470.2 68418.m07323 zinc finger (Ran-binding) family protei...    31   0.54 
At5g58470.1 68418.m07322 zinc finger (Ran-binding) family protei...    31   0.54 
At2g05530.1 68415.m00585 glycine-rich protein                          31   0.54 
At5g59170.1 68418.m07416 proline-rich family protein contains pr...    31   0.72 
At4g39260.1 68417.m05557 glycine-rich RNA-binding protein 8 (GRP...    31   0.72 
At1g11070.1 68414.m01268 hydroxyproline-rich glycoprotein family...    31   0.72 
At3g49430.1 68416.m05403 pre-mRNA splicing factor, putative stro...    31   0.95 
At3g13570.1 68416.m01707 SC35-like splicing factor, 30a kD (SCL3...    31   0.95 
At1g11850.2 68414.m01364 expressed protein                             31   0.95 
At5g66400.1 68418.m08374 dehydrin (RAB18) nearly identical to SP...    30   1.3  
At4g29240.1 68417.m04182 leucine-rich repeat family protein / ex...    30   1.3  
At1g76460.1 68414.m08893 RNA recognition motif (RRM)-containing ...    30   1.3  
At1g20790.1 68414.m02603 F-box family protein contains Pfam:PF00...    30   1.3  
At1g11850.1 68414.m01363 expressed protein                             30   1.3  
At1g10830.1 68414.m01244 sodium symporter-related contains five ...    30   1.3  
At3g15400.1 68416.m01954 anther development protein, putative si...    29   2.2  
At2g05520.1 68415.m00584 glycine-rich protein (GRP) identical to...    29   2.2  
At4g38770.1 68417.m05490 proline-rich family protein (PRP4) simi...    29   2.9  
At4g30460.1 68417.m04325 glycine-rich protein                          29   2.9  
At4g29030.1 68417.m04151 glycine-rich protein glycine-rich prote...    29   2.9  
At3g13224.2 68416.m01658 RNA recognition motif (RRM)-containing ...    29   2.9  
At2g05440.1 68415.m00574 glycine-rich protein                          29   2.9  
At1g74230.1 68414.m08597 glycine-rich RNA-binding protein simila...    29   2.9  
At5g58040.1 68418.m07263 fip1 motif-containing protein contains ...    29   3.8  
At4g10330.1 68417.m01698 glycine-rich protein                          29   3.8  
At3g16380.1 68416.m02074 polyadenylate-binding protein, putative...    29   3.8  
At3g07810.2 68416.m00956 heterogeneous nuclear ribonucleoprotein...    29   3.8  
At3g07810.1 68416.m00955 heterogeneous nuclear ribonucleoprotein...    29   3.8  
At2g42520.1 68415.m05262 DEAD box RNA helicase, putative similar...    29   3.8  
At2g07698.1 68415.m00949 ATP synthase alpha chain, mitochondrial...    29   3.8  
At5g61030.1 68418.m07659 RNA-binding protein, putative similar t...    28   5.0  
At4g39260.4 68417.m05560 glycine-rich RNA-binding protein 8 (GRP...    28   5.0  
At4g35785.2 68417.m05083 transformer serine/arginine-rich ribonu...    28   5.0  
At4g21620.1 68417.m03134 glycine-rich protein                          28   5.0  
At1g76930.2 68414.m08956 proline-rich extensin-like family prote...    28   5.0  
At1g76930.1 68414.m08955 proline-rich extensin-like family prote...    28   5.0  
At1g66820.1 68414.m07595 glycine-rich protein                          28   5.0  
At1g47655.1 68414.m05294 Dof-type zinc finger domain-containing ...    28   5.0  
At1g04800.1 68414.m00476 glycine-rich protein                          28   5.0  
At5g51680.1 68418.m06407 hydroxyproline-rich glycoprotein family...    28   6.7  
At4g38680.1 68417.m05477 cold-shock DNA-binding family protein c...    28   6.7  
At4g35785.1 68417.m05082 transformer serine/arginine-rich ribonu...    28   6.7  
At3g54800.1 68416.m06064 pleckstrin homology (PH) domain-contain...    28   6.7  
At1g60890.1 68414.m06855 phosphatidylinositol-4-phosphate 5-kina...    28   6.7  
At1g21310.1 68414.m02662 proline-rich extensin-like family prote...    28   6.7  
At4g28100.1 68417.m04031 expressed protein                             27   8.8  
At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid t...    27   8.8  
At3g24760.1 68416.m03108 F-box family protein   ; similar to SKP...    27   8.8  
At3g07560.1 68416.m00903 glycine-rich protein                          27   8.8  
At2g04190.1 68415.m00404 meprin and TRAF homology domain-contain...    27   8.8  
At1g17640.1 68414.m02183 RNA recognition motif (RRM)-containing ...    27   8.8  
At1g16210.1 68414.m01941 expressed protein ESTs gb|T04357 and gb...    27   8.8  
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex...    24   9.2  

>At5g53870.1 68418.m06701 plastocyanin-like domain-containing
           protein contains similarity to SP|Q02917 Early nodulin
           55-2 precursor {Glycine max}; PF02298: Plastocyanin-like
           domain
          Length = 370

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 24/69 (34%), Positives = 30/69 (43%)
 Frame = +3

Query: 276 PTSPRPSPSSKASLYLTPSTDPFHTQLRSTCLIPSR*PCPNPTRSSNTCHIT*RSTLRFP 455
           P +P PSP S + +  +PS  P HT   S    PS  P   P+ S    H    S    P
Sbjct: 204 PATPSPSPKSPSPVSHSPSHSPAHTPSHSPAHTPSHSPAHAPSHS--PAHAPSHSPAHAP 261

Query: 456 STFPRHTQS 482
           S  P H+ S
Sbjct: 262 SHSPAHSPS 270



 Score = 32.3 bits (70), Expect = 0.31
 Identities = 21/67 (31%), Positives = 25/67 (37%)
 Frame = +3

Query: 282 SPRPSPSSKASLYLTPSTDPFHTQLRSTCLIPSR*PCPNPTRSSNTCHIT*RSTLRFPST 461
           SP   P S + +  TP+  P H    S        P P+P   S   H    S    PS 
Sbjct: 177 SPAQPPKSSSPISHTPALSPSHATSHSPAT-----PSPSPKSPSPVSHSPSHSPAHTPSH 231

Query: 462 FPRHTQS 482
            P HT S
Sbjct: 232 SPAHTPS 238


>At1g16610.2 68414.m01990 arginine/serine-rich protein, putative
           (SR45) similar to arginine/serine-rich protein
           GI:6601502 from [Arabidopsis thaliana]
          Length = 407

 Score = 36.3 bits (80), Expect = 0.019
 Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
 Frame = +1

Query: 379 QGSRAPTLRGRQTRAISREGV-----R*GSRPRSRAIPSRKEGALSRTRTS*QALPRQGA 543
           +G R+P++ G  +R+ SR        R  SR RSR+       + SR+ +S    P +  
Sbjct: 6   RGRRSPSVSGSSSRSSSRSRSGSSPSRSISRSRSRSRSLSSSSSPSRSVSSGSRSPPRRG 65

Query: 544 RAPALPSREAR---PLPRQGSSAPT 609
           ++PA P+R  R   P P +G+S+P+
Sbjct: 66  KSPAGPARRGRSPPPPPSKGASSPS 90


>At1g16610.1 68414.m01989 arginine/serine-rich protein, putative
           (SR45) similar to arginine/serine-rich protein
           GI:6601502 from [Arabidopsis thaliana]
          Length = 414

 Score = 36.3 bits (80), Expect = 0.019
 Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
 Frame = +1

Query: 379 QGSRAPTLRGRQTRAISREGV-----R*GSRPRSRAIPSRKEGALSRTRTS*QALPRQGA 543
           +G R+P++ G  +R+ SR        R  SR RSR+       + SR+ +S    P +  
Sbjct: 6   RGRRSPSVSGSSSRSSSRSRSGSSPSRSISRSRSRSRSLSSSSSPSRSVSSGSRSPPRRG 65

Query: 544 RAPALPSREAR---PLPRQGSSAPT 609
           ++PA P+R  R   P P +G+S+P+
Sbjct: 66  KSPAGPARRGRSPPPPPSKGASSPS 90


>At2g05510.1 68415.m00583 glycine-rich protein 
          Length = 127

 Score = 34.7 bits (76), Expect = 0.058
 Identities = 19/44 (43%), Positives = 23/44 (52%)
 Frame = +2

Query: 143 NLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGGH 274
           N G G+G+DG   G+ GH  G GG Y    GG+  G     GGH
Sbjct: 67  NGGGGHGLDGYGGGHGGHYGGGGGHYG-GGGGHGGGGHYGGGGH 109



 Score = 29.9 bits (64), Expect = 1.7
 Identities = 17/42 (40%), Positives = 19/42 (45%)
 Frame = +2

Query: 149 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGGH 274
           G+G    G   G  G+G G GG Y    G Y  G G   GGH
Sbjct: 62  GHGGHNGGGGHGLDGYGGGHGGHYGGGGGHYGGGGGHGGGGH 103


>At1g61255.1 68414.m06903 expressed protein
          Length = 143

 Score = 34.7 bits (76), Expect = 0.058
 Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
 Frame = +2

Query: 143 NLGYGYG-IDGLDV----GYIGHGQGLGGAYNYVDGGYSSGYGL 259
           N GYG G   GL      G+I  G G GG+Y+ + GGYS G G+
Sbjct: 48  NKGYGSGGYPGLTTEPATGFILPGSGPGGSYSELSGGYSKGRGV 91


>At1g02840.3 68414.m00246 pre-mRNA splicing factor SF2 (SF2) / SR1
           protein identical to SP|O22315 Pre-mRNA splicing factor
           SF2 (SR1 protein) {Arabidopsis thaliana}
          Length = 303

 Score = 34.3 bits (75), Expect = 0.077
 Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
 Frame = +1

Query: 373 SRQGSRAPTLRGRQ-TRAISREGVR*GSRPRSRAIPSRKEGALSRTRTS*QALPRQGARA 549
           SR+ SR+P+ RGR  +++ SR   R  SR RSR   SR      + ++S ++  +  +R+
Sbjct: 197 SRKDSRSPS-RGRSYSKSRSRSRGRSVSRSRSR---SRSRSRSPKAKSSRRSPAKSTSRS 252

Query: 550 PALPSREARPLPRQGSSAPTLP 615
           P   S+   P PR+  S    P
Sbjct: 253 PGPRSKSRSPSPRRSRSRSRSP 274


>At1g02840.2 68414.m00244 pre-mRNA splicing factor SF2 (SF2) / SR1
           protein identical to SP|O22315 Pre-mRNA splicing factor
           SF2 (SR1 protein) {Arabidopsis thaliana}
          Length = 285

 Score = 34.3 bits (75), Expect = 0.077
 Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
 Frame = +1

Query: 373 SRQGSRAPTLRGRQ-TRAISREGVR*GSRPRSRAIPSRKEGALSRTRTS*QALPRQGARA 549
           SR+ SR+P+ RGR  +++ SR   R  SR RSR   SR      + ++S ++  +  +R+
Sbjct: 197 SRKDSRSPS-RGRSYSKSRSRSRGRSVSRSRSR---SRSRSRSPKAKSSRRSPAKSTSRS 252

Query: 550 PALPSREARPLPRQGSSAPTL 612
           P   S+   P PR+  +  TL
Sbjct: 253 PGPRSKSRSPSPRRWITVETL 273


>At1g02840.1 68414.m00245 pre-mRNA splicing factor SF2 (SF2) / SR1
           protein identical to SP|O22315 Pre-mRNA splicing factor
           SF2 (SR1 protein) {Arabidopsis thaliana}
          Length = 303

 Score = 34.3 bits (75), Expect = 0.077
 Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
 Frame = +1

Query: 373 SRQGSRAPTLRGRQ-TRAISREGVR*GSRPRSRAIPSRKEGALSRTRTS*QALPRQGARA 549
           SR+ SR+P+ RGR  +++ SR   R  SR RSR   SR      + ++S ++  +  +R+
Sbjct: 197 SRKDSRSPS-RGRSYSKSRSRSRGRSVSRSRSR---SRSRSRSPKAKSSRRSPAKSTSRS 252

Query: 550 PALPSREARPLPRQGSSAPTLP 615
           P   S+   P PR+  S    P
Sbjct: 253 PGPRSKSRSPSPRRSRSRSRSP 274


>At1g27710.1 68414.m03387 glycine-rich protein 
          Length = 212

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 19/47 (40%), Positives = 23/47 (48%)
 Frame = +2

Query: 131 RGLLNLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 271
           +G L  G GYG  G   G  G+G G GG    + GG+  G G   GG
Sbjct: 99  KGELTAG-GYGGGGPGYGGGGYGPGGGGGGVVIGGGFGGGAGYGSGG 144


>At2g15780.1 68415.m01809 glycine-rich protein similar to Blue
           copper protein precursor (SP:Q41001) {Pisum sativum};
           contains a Pfam PF02298: Plastocyanin-like domain
           related to blue copper-binding protein; contains a
           domain related to blue copper-binding protein
          Length = 257

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
 Frame = +2

Query: 149 GYGYGIDGL-----DVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGGHT 277
           G+G+G  G+       G  G G G+G   NY  G   SG G  +GGH+
Sbjct: 84  GWGWGWGGVPNNTHSSGSGGSGWGMGPNNNYSSGSGGSGSGWGYGGHS 131


>At5g61660.1 68418.m07736 glycine-rich protein
          Length = 134

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 22/46 (47%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
 Frame = +2

Query: 149 GYGYGI-DGLDVGYIGHGQGLGGA----YNYVDGGYSSGYGLNFGG 271
           GYGYG   G   GY G+G G GGA    Y Y  G   SG G   GG
Sbjct: 74  GYGYGSGSGSGTGY-GYGSGGGGARGGGYGYGSGNGRSGGGGGGGG 118


>At5g46730.1 68418.m05757 glycine-rich protein 
          Length = 290

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 21/42 (50%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +2

Query: 149 GYGYGIDGL-DVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 271
           GYG G +G    G  GHG G GGA +   GGY+SG G   GG
Sbjct: 72  GYG-GAEGYASGGGSGHGGGGGGAAS--SGGYASGAGEGGGG 110



 Score = 31.9 bits (69), Expect = 0.41
 Identities = 19/42 (45%), Positives = 21/42 (50%)
 Frame = +2

Query: 149 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGGH 274
           GYG G  G   G  G G+G GG+Y    GG S G     GGH
Sbjct: 242 GYGGGAAGGYGGGGGGGEGGGGSYGGEHGGGSGGGHGGGGGH 283



 Score = 30.7 bits (66), Expect = 0.95
 Identities = 20/46 (43%), Positives = 25/46 (54%)
 Frame = +2

Query: 134 GLLNLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 271
           G+ + GYG G  G   G  G G+G GG Y   + GY+SG G   GG
Sbjct: 47  GVSSGGYG-GESGGGYGG-GSGEGAGGGYGGAE-GYASGGGSGHGG 89



 Score = 30.3 bits (65), Expect = 1.3
 Identities = 18/41 (43%), Positives = 19/41 (46%)
 Frame = +2

Query: 149 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 271
           G  YG  G   G  G G G GG Y    GG + GYG   GG
Sbjct: 220 GGAYGGGGAHGGGYGSGGGEGGGYG---GGAAGGYGGGGGG 257



 Score = 28.7 bits (61), Expect = 3.8
 Identities = 19/41 (46%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +2

Query: 149 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGG-YSSGYGLNFG 268
           GYG G  G   G  G G G GG   Y  GG ++SGYG   G
Sbjct: 111 GYG-GAAGGHAGGGGGGSGGGGGSAYGAGGEHASGYGNGAG 150



 Score = 28.3 bits (60), Expect = 5.0
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = +2

Query: 149 GYGYGIDGLDVGYI-GHGQGLGGAYNYVDGGYSSGYGLNFGG 271
           G G G      GY  G G+G GG Y    GG++ G G   GG
Sbjct: 88  GGGGGGAASSGGYASGAGEGGGGGYGGAAGGHAGGGGGGSGG 129



 Score = 27.5 bits (58), Expect = 8.8
 Identities = 18/47 (38%), Positives = 18/47 (38%)
 Frame = +2

Query: 131 RGLLNLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 271
           R LLN G   G  G   G    G   GG      GGY  G G   GG
Sbjct: 25  RNLLNYGQASGGGGHGGGGGSGGVSSGGYGGESGGGYGGGSGEGAGG 71


>At5g40490.1 68418.m04910 RNA recognition motif (RRM)-containing
           protein ribonucleoprotein, Xenopus laevis, PIR:S40778;
           contains InterPro entry IPR000504: RNA-binding region
           RNP-1 (RNA recognition motif) (RRM)
          Length = 423

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
 Frame = +2

Query: 149 GYGYGIDGLD----VGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 271
           GYG G+        +GY G   G GG YN   GGYS G G  +GG
Sbjct: 279 GYGGGVGPYRGEPALGYSGRYGGGGGGYNR--GGYSMGGGGGYGG 321



 Score = 31.1 bits (67), Expect = 0.72
 Identities = 18/41 (43%), Positives = 22/41 (53%)
 Frame = +2

Query: 149 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 271
           G GYG  G+     G+G G+GGA     GGY  G G + GG
Sbjct: 346 GGGYGSSGIG----GYGGGMGGAGG---GGYRGGGGYDMGG 379



 Score = 30.7 bits (66), Expect = 0.95
 Identities = 21/46 (45%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = +2

Query: 143 NLGYGYGIDGLDVGYIGHGQGLGGAYNY---VDGGYSSGYGLNFGG 271
           N G GYG DG   G+ G   G GG Y       GG S GYG  +GG
Sbjct: 227 NFGGGYG-DGYGGGHGGGYGGPGGPYKSGGGYGGGRSGGYG-GYGG 270



 Score = 28.3 bits (60), Expect = 5.0
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = +2

Query: 149 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGGH 274
           GYG G+ G   G  G+  G G     V GG + GYG   GG+
Sbjct: 356 GYGGGMGGAGGG--GYRGGGGYDMGGVGGGGAGGYGAGGGGN 395



 Score = 27.5 bits (58), Expect = 8.8
 Identities = 19/46 (41%), Positives = 20/46 (43%), Gaps = 5/46 (10%)
 Frame = +2

Query: 149 GYGYGIDGLDVGYIGH-GQGLGGAYNYVDGGYSS----GYGLNFGG 271
           GYG G   +  G  G  G G GG      GGY S    GYG   GG
Sbjct: 318 GYGGGPGDMYGGSYGEPGGGYGGPSGSYGGGYGSSGIGGYGGGMGG 363


>At2g05440.2 68415.m00575 glycine-rich protein
          Length = 154

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 20/55 (36%), Positives = 24/55 (43%)
 Frame = +2

Query: 149 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGGHTDVTKTITLVKGV 313
           G  YG  G   G  G G G GG Y    GGY  G G + GG   + + +    GV
Sbjct: 100 GGHYGGGGGHYGGGGGGHGGGGHYGGGGGGYGGGGGHHGGGGHGLNEPVQTKPGV 154



 Score = 27.5 bits (58), Expect = 8.8
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
 Frame = +2

Query: 143 NLGYGYGIDGLDVG---YIGHG--QGLGGAYNYVDGGYSSGYGLNFGG 271
           N G G+G+DG   G   Y G G   G GG +    GG+  G G ++GG
Sbjct: 65  NGGGGHGLDGYGGGGGHYGGGGGHYGGGGGHYGGGGGHYGGGGGHYGG 112


>At5g58470.2 68418.m07323 zinc finger (Ran-binding) family protein
           weak similarity to SP|Q01844 RNA-binding protein EWS
           (EWS oncogene) (Ewing sarcoma breakpoint region 1
           protein) {Homo sapiens}; contains Pfam profiles PF00076:
           RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
           PF00641: Zn-finger in Ran binding protein and others
          Length = 422

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 20/42 (47%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +2

Query: 149 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGL-NFGG 271
           G G G  G D GY G G   GG+Y    GGY  G G  N GG
Sbjct: 24  GGGGGYGGGDAGYGGRGASGGGSYG-GRGGYGGGGGRGNRGG 64


>At5g58470.1 68418.m07322 zinc finger (Ran-binding) family protein
           weak similarity to SP|Q01844 RNA-binding protein EWS
           (EWS oncogene) (Ewing sarcoma breakpoint region 1
           protein) {Homo sapiens}; contains Pfam profiles PF00076:
           RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
           PF00641: Zn-finger in Ran binding protein and others
          Length = 422

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 20/42 (47%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +2

Query: 149 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGL-NFGG 271
           G G G  G D GY G G   GG+Y    GGY  G G  N GG
Sbjct: 24  GGGGGYGGGDAGYGGRGASGGGSYG-GRGGYGGGGGRGNRGG 64


>At2g05530.1 68415.m00585 glycine-rich protein 
          Length = 115

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 18/40 (45%), Positives = 22/40 (55%)
 Frame = +2

Query: 155 GYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGGH 274
           G+G +G   GY G G G  G   +  GGY+ G G N GGH
Sbjct: 44  GHGGNG---GYNGGG-GYNGGGGHNGGGYNGGGGYNGGGH 79


>At5g59170.1 68418.m07416 proline-rich family protein contains
           proline-rich extensin domains, INTERPRO:IPR002965
          Length = 288

 Score = 31.1 bits (67), Expect = 0.72
 Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
 Frame = +2

Query: 308 GVPVPYAVDRPVP---YPVEKHVPYPVKVAVPQPYE--VVKHVPYHVKEYVKVPV 457
           G   PY+  +P P   YP     P P+K   P PYE   VK+ P  +K Y   PV
Sbjct: 46  GPKFPYSPPKPPPIEKYPPPVQYPPPIKKYPPPPYEHPPVKYPP-PIKTYPHPPV 99


>At4g39260.1 68417.m05557 glycine-rich RNA-binding protein 8 (GRP8)
           (CCR1) SP|Q03251 Glycine-rich RNA-binding protein 8
           (CCR1 protein) (GRP8) {Arabidopsis thaliana} isoform
           contains a non-consensus CG acceptor splice site at
           intron 2
          Length = 169

 Score = 31.1 bits (67), Expect = 0.72
 Identities = 17/36 (47%), Positives = 18/36 (50%)
 Frame = +2

Query: 149 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYG 256
           GYG G  G   GY G G+  GG Y   DGG   G G
Sbjct: 131 GYGSGGGGGGRGYGGGGRREGGGYGGGDGGSYGGGG 166



 Score = 30.3 bits (65), Expect = 1.3
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = +2

Query: 149 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 271
           GY     G   G  G G+G GG      GGY  G G ++GG
Sbjct: 124 GYERRSGGYGSGGGGGGRGYGGGGRREGGGYGGGDGGSYGG 164


>At1g11070.1 68414.m01268 hydroxyproline-rich glycoprotein family
           protein contains proline-rich extensin domains,
           INTERPRO:IPR002965
          Length = 554

 Score = 31.1 bits (67), Expect = 0.72
 Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = +1

Query: 457 PRSRAIPSRKEGALSRTRTS*QALPRQGARAPALPSREARPLP-RQGSSAPTLPRGETRA 633
           P + AIP      +S  + S   LP    RA ALP     P+  R+G +AP LP   T A
Sbjct: 200 PGNAAIPVEPPLTMSAEKESYAPLPPPPGRA-ALPPPPPLPMAVRKGVAAPPLPPPGTAA 258

Query: 634 IP 639
           +P
Sbjct: 259 LP 260


>At3g49430.1 68416.m05403 pre-mRNA splicing factor, putative strong
           similarity to SP|O22315 Pre-mRNA splicing factor SF2
           (SR1 protein) {Arabidopsis thaliana}
          Length = 300

 Score = 30.7 bits (66), Expect = 0.95
 Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
 Frame = +1

Query: 373 SRQGSRAPTLRGRQTRAISREGVR*GSRPRSRAIPSRKEGALSRTRTS*QALPR--QGAR 546
           SR  SR+P+    ++R+ SR   R  S  RSR++   K      +++  ++L R    +R
Sbjct: 201 SRSRSRSPSRSRSRSRSRSRSRGRGRSHSRSRSLSRSKSPRKDLSKSPRRSLSRSISKSR 260

Query: 547 APALPSREARPLPRQGSSAPTLPRGETRAIPRRS 648
           +P+ P ++  P PR  S + +  R  +R+ P +S
Sbjct: 261 SPS-PDKKKSP-PRAMSRSKSRSRSRSRS-PSKS 291


>At3g13570.1 68416.m01707 SC35-like splicing factor, 30a kD (SCL30a)
           almost identical to SC35-like splicing factor SCL30a
           GI:9843661 from [Arabidopsis thaliana]; contains Pfam
           profile PF00076: RNA recognition motif. (a.k.a. RRM,
           RBD, or RNP domain)
          Length = 262

 Score = 30.7 bits (66), Expect = 0.95
 Identities = 24/73 (32%), Positives = 32/73 (43%)
 Frame = +1

Query: 403 RGRQTRAISREGVR*GSRPRSRAIPSRKEGALSRTRTS*QALPRQGARAPALPSREARPL 582
           R  + R+ SR     GSR RS + P R +      R S    PR+        +R   P+
Sbjct: 183 RYEKERSYSRSPPHNGSRVRSGS-PGRVKSHSRSPRRS--VSPRKNRSYTPEQARSQSPV 239

Query: 583 PRQGSSAPTLPRG 621
           PRQ  S   +PRG
Sbjct: 240 PRQSRSPTPVPRG 252


>At1g11850.2 68414.m01364 expressed protein
          Length = 108

 Score = 30.7 bits (66), Expect = 0.95
 Identities = 21/49 (42%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = +2

Query: 134 GLLNLGYGYGID---GLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 271
           GL  LG G GI    GL +G  G G G GG      GG+  G G   GG
Sbjct: 58  GLGGLGIGAGIGAGAGLGLGGGGGGLGGGGGGLLGGGGFGGGAGGGLGG 106


>At5g66400.1 68418.m08374 dehydrin (RAB18) nearly identical to
           SP|P30185 Dehydrin Rab18 {Arabidopsis thaliana}
          Length = 186

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 22/62 (35%), Positives = 28/62 (45%)
 Frame = +2

Query: 107 PLEKKLDKRGLLNLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGGHTDVT 286
           P++++ D+ G    G GYG  G      G G G GG   Y  GG   GYG    G+   T
Sbjct: 19  PIQQQYDEYGNPMGGGGYGTGGGGGATGGQGYGTGG-QGYGSGG--QGYGTGGQGYGTGT 75

Query: 287 KT 292
            T
Sbjct: 76  GT 77



 Score = 29.1 bits (62), Expect = 2.9
 Identities = 16/40 (40%), Positives = 18/40 (45%)
 Frame = +2

Query: 149 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFG 268
           G GYG  G   G  G G G GG   Y  G  + G+G   G
Sbjct: 47  GQGYGTGGQGYGSGGQGYGTGG-QGYGTGTGTEGFGTGGG 85


>At4g29240.1 68417.m04182 leucine-rich repeat family protein /
           extensin family protein contains Pfam PF00560: Leucine
           Rich Repeat domains; similar to leucine-rich
           repeat/extensin 1 (GI:13809918) [Arabidopsis thaliana]
          Length = 415

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +2

Query: 134 GLLNLGYGYGIDG-LDVGYIGHGQGLGGAYNYVDGGYSSGYGLN 262
           GL+     +G+ G + VG IG G G GG   +V GGY++G   N
Sbjct: 22  GLVQTDASFGVGGGVGVG-IGGGGGGGGGGVWVGGGYNNGGNRN 64


>At1g76460.1 68414.m08893 RNA recognition motif (RRM)-containing
           protein low similarity to RRM-containing protein SEB-4
           [Xenopus laevis] GI:8895698; contains Pfam profile:
           PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP
           domain)
          Length = 285

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +2

Query: 209 GGAYNYVDGGYSSG-YGLNFGGHTDVTKTITLVKGVPVPYAVDRPVPYPVEKHV 367
           G  Y  V G    G + L  GG T  T T + +  +  PY    P P PV+ H+
Sbjct: 212 GHGYTAVQGYSVPGSHILQLGGPTVSTMTTSSMPALQAPYPSGIPGPAPVQSHI 265


>At1g20790.1 68414.m02603 F-box family protein contains Pfam:PF00646
           F-box domain
          Length = 435

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 11/49 (22%), Positives = 26/49 (53%)
 Frame = +2

Query: 311 VPVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHVKEYVKVPV 457
           +P+P  +  P+P  +  H+  P+ +A+P P  +   +P  +   + +P+
Sbjct: 355 MPMPMPMPMPMPMHMHMHMHMPMPMAMPMPMPIAMAMPMPMPMPMPMPM 403


>At1g11850.1 68414.m01363 expressed protein
          Length = 93

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 18/44 (40%), Positives = 20/44 (45%)
 Frame = +2

Query: 140 LNLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 271
           L LG G G+ GL    IG G G G       GG+  G G   GG
Sbjct: 51  LGLGGGAGLGGLG---IGAGIGAGAGLGLGGGGFGGGAGGGLGG 91


>At1g10830.1 68414.m01244 sodium symporter-related contains five
           transmembrane domains; Interpro IPR001991
           Sodium:dicarboxylate symporter; EST gb|F13926 comes from
           this gene
          Length = 367

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = -3

Query: 487 LFDWVWRGNVDGNLNVLLHVIWHVFDDLVGLGHGYLDGIRHV 362
           L  WV+ G V G +  +L+V+W   D+  G G  ++D + ++
Sbjct: 93  LVSWVYFGVVLGVVLFILNVVW--IDNSTGFGKSFIDAVSNI 132


>At3g15400.1 68416.m01954 anther development protein, putative
           similar to anther development protein ATA20 GB:AAC50042
           GI:2708813 from [Arabidopsis thaliana]
          Length = 416

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 19/41 (46%), Positives = 22/41 (53%)
 Frame = +2

Query: 146 LGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFG 268
           +G GYG  G  VGY G G G  G   + +G  SSG G  FG
Sbjct: 207 VGRGYGSGGSGVGY-GVGIGSSGGSGFGEGIGSSG-GNGFG 245


>At2g05520.1 68415.m00584 glycine-rich protein (GRP) identical to
           glycine-rich protein; atGRP (GI:259447) [Arabidopsis
           thaliana]
          Length = 145

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 20/51 (39%), Positives = 23/51 (45%)
 Frame = +2

Query: 119 KLDKRGLLNLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 271
           K D+RG  + G  Y   G   G  G+ QG GG Y    G Y  G G   GG
Sbjct: 38  KPDQRGYGDNGGNYNNGGGYQGGGGNYQGGGGNYQGGGGNYQGGGGRYQGG 88


>At4g38770.1 68417.m05490 proline-rich family protein (PRP4) similar
           to proline-rich protein [Arabidopsis thaliana]
           gi|6782442|gb|AAF28388; contains proline-rich extensin
           domains, INTERPRO:IPR002965
          Length = 448

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 18/49 (36%), Positives = 23/49 (46%)
 Frame = +2

Query: 314 PVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHVKEYVKVPVH 460
           P P  ++ P P PV K    P K+  P P  V K  P  ++    VPVH
Sbjct: 248 PKPPKIEHPPPVPVYKP---PPKIEKPPPVPVYKPPP-KIEHPPPVPVH 292



 Score = 27.5 bits (58), Expect = 8.8
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +2

Query: 320 PYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHVKEYVKVPVH 460
           P  V+ P P P +   P P K+  P P  V K  P  +++   VPV+
Sbjct: 232 PPKVELPPPIPKKPCPPKPPKIEHPPPVPVYKPPP-KIEKPPPVPVY 277


>At4g30460.1 68417.m04325 glycine-rich protein
          Length = 162

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 18/44 (40%), Positives = 21/44 (47%)
 Frame = +2

Query: 149 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGGHTD 280
           G G+G  G   G  G G G G    Y +GG   GYG  +GG  D
Sbjct: 122 GGGHGGGGGGGGGRGGGGGSGNGEGYGEGG---GYGGGYGGGDD 162


>At4g29030.1 68417.m04151 glycine-rich protein glycine-rich protein
           - Onobrychis viciifolia,PID:g2565429
          Length = 115

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = +2

Query: 149 GYGYGIDGL--DVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGGHTDV 283
           G G G+ G   ++GY G G   GG    + GG  SG G   GG + +
Sbjct: 54  GVGGGVSGPGGNLGYGGFGGAGGGLGGGLGGGAGSGLGGGLGGGSGI 100


>At3g13224.2 68416.m01658 RNA recognition motif (RRM)-containing
           protein contains InterPro entry IPR000504: RNA-binding
           region RNP-1 (RNA recognition motif) (RRM)
          Length = 358

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 22/47 (46%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
 Frame = +2

Query: 149 GYGYGIDGLDVG--YIGHGQG-LGGAYNYVDGGYSS---GYGLNFGG 271
           GYG G  G + G  Y  +G G LGG  N    GYSS    YG  FGG
Sbjct: 247 GYGRGSVGPEFGGGYNNYGGGSLGGYRNEPPLGYSSRFGPYGSGFGG 293


>At2g05440.1 68415.m00574 glycine-rich protein
          Length = 127

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +2

Query: 155 GYGIDGLDV-GYIGHGQGLGGAYNYVDGGYSSGYGLNFGGHTDVTKTITLVKGV 313
           GYG  G    G  GH  G GG Y    GGY  G G + GG   + + +    GV
Sbjct: 74  GYGGGGGHYGGGGGHYGGGGGHYGGGGGGYGGGGGHHGGGGHGLNEPVQTKPGV 127



 Score = 28.7 bits (61), Expect = 3.8
 Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
 Frame = +2

Query: 143 NLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSG---YGLNFGGH 274
           N G G+G+DG   G  GH  G GG Y    G Y  G   YG   GGH
Sbjct: 65  NGGGGHGLDGYGGGG-GHYGGGGGHYGGGGGHYGGGGGGYGGG-GGH 109


>At1g74230.1 68414.m08597 glycine-rich RNA-binding protein similar
           to RNA-binding protein GB:S46286 from [Nicotiana
           sylvestris]
          Length = 289

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
 Frame = +2

Query: 143 NLGYGYGIDGLDVGYIGHGQGLGGAYNYVDG--GYSSGYGLNFGG 271
           N G G G  G +  Y G+  G GG   Y     G   GYG NFGG
Sbjct: 158 NAGGGGGYGG-NSSYGGNAGGYGGNPPYSGNAVGGGGGYGSNFGG 201



 Score = 28.3 bits (60), Expect = 5.0
 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
 Frame = +2

Query: 182 GYIGHG-QGLGGAYNYVDGGY---SSGYGLNFGGH 274
           G+ G G  G GG Y   DGGY   + GYG   GG+
Sbjct: 115 GFGGRGFGGPGGGYGASDGGYGAPAGGYGGGAGGY 149


>At5g58040.1 68418.m07263 fip1 motif-containing protein contains
           Pfam profile PF05182: Fip1 motif
          Length = 1192

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 16/30 (53%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = +2

Query: 167 DGLDVGYIGHGQGLGGAYNYVDGGYSS-GY 253
           DG D G  G G G GGA      GYSS GY
Sbjct: 219 DGKDGGEAGKGSGPGGATGPPKAGYSSHGY 248


>At4g10330.1 68417.m01698 glycine-rich protein
          Length = 130

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +2

Query: 140 LNLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFG 268
           L +G G+G     +G +G G G+ G    +  G   G G+ FG
Sbjct: 35  LGVGCGFGFGAGLIGGVGFGPGVPGLQFGLGFGAGCGIGVGFG 77



 Score = 28.7 bits (61), Expect = 3.8
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +2

Query: 146 LGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSG 250
           LG+G G  G+ VG+ G+G G G AY++    Y+ G
Sbjct: 64  LGFGAGC-GIGVGF-GYGVGRGAAYDHSRSYYNVG 96


>At3g16380.1 68416.m02074 polyadenylate-binding protein, putative /
           PABP, putative similar to polyadenylate-binding protein
           (poly(A)-binding protein) from {Arabidopsis thaliana}
           SP|P42731, [Cucumis sativus] GI:7528270, {Homo sapiens}
           SP|Q13310, {Arabidopsis thaliana} SP|Q05196; contains
           InterPro entry IPR000504: RNA-binding region RNP-1 (RNA
           recognition motif) (RRM)
          Length = 537

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = +1

Query: 472 IPSRKEGALSRTRTS*QALPRQGARAPALPSREARPLPRQGSSA 603
           +  RKE  + R +   QA PRQ  +AP+ PS  A+P+    SS+
Sbjct: 378 VAERKEDRIKRLQQYFQAQPRQYTQAPSAPS-PAQPVLSYVSSS 420


>At3g07810.2 68416.m00956 heterogeneous nuclear ribonucleoprotein,
           putative / hnRNP, putative contains Pfam profile:
           PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP
           domain)
          Length = 495

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
 Frame = +2

Query: 137 LLNLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGG------YSSGYGLN 262
           LLN GY  G +   VG  G+G  + G ++ V  G      YSSGYG+N
Sbjct: 211 LLN-GYAQGFNPAAVG--GYGLRMDGRFSPVGAGRSGFANYSSGYGMN 255


>At3g07810.1 68416.m00955 heterogeneous nuclear ribonucleoprotein,
           putative / hnRNP, putative contains Pfam profile:
           PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP
           domain)
          Length = 494

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
 Frame = +2

Query: 137 LLNLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGG------YSSGYGLN 262
           LLN GY  G +   VG  G+G  + G ++ V  G      YSSGYG+N
Sbjct: 211 LLN-GYAQGFNPAAVG--GYGLRMDGRFSPVGAGRSGFANYSSGYGMN 255


>At2g42520.1 68415.m05262 DEAD box RNA helicase, putative similar to
           SP|O00571 DEAD-box protein 3 (Helicase-like protein 2)
           {Homo sapiens}, DEAD box RNA helicase DDX3 [Homo
           sapiens] GI:3523150; contains Pfam profiles PF00270:
           DEAD/DEAH box helicase, PF00271: Helicase conserved
           C-terminal domain
          Length = 633

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = +2

Query: 143 NLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGG-YSSGY-GLNFGGH 274
           + G G G  G   G  G G G GG   Y  GG Y  GY G + GG+
Sbjct: 579 SFGSGRGGYGGGGGGYGGGGGYGGGGGYGGGGGYGGGYGGASSGGY 624


>At2g07698.1 68415.m00949 ATP synthase alpha chain, mitochondrial,
           putative very strong similarity to SP|P23413 ATP
           synthase alpha chain, mitochondrial (EC 3.6.3.14)
           {Brassica campestris}; contains Pfam profiles PF00006:
           ATP synthase alpha/beta family nucleotide-binding
           domain, PF00306: ATP synthase ab C terminal, PF02874:
           ATP synthase alpha/beta family beta-barrel domain
          Length = 777

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 16/51 (31%), Positives = 21/51 (41%)
 Frame = +2

Query: 242 SSGYGLNFGGHTDVTKTITLVKGVPVPYAVDRPVPYPVEKHVPYPVKVAVP 394
           S G G       D  + ++L    P P  +  PVP+P E   P PV    P
Sbjct: 128 SGGNGWTESAANDPAREVSLA---PFPLQLTHPVPFPAEPGSPDPVSPPPP 175


>At5g61030.1 68418.m07659 RNA-binding protein, putative similar to
           RNA-binding protein from [Solanum tuberosum]
           GI:15822705, [Nicotiana tabacum] GI:15822703, [Nicotiana
           sylvestris] GI:624925; contains InterPro entry
           IPR000504: RNA-binding region RNP-1 (RNA recognition
           motif) (RRM)
          Length = 309

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 18/42 (42%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
 Frame = +2

Query: 155 GYGIDGLDVGYIGHGQGLGGAYNYVDGGY--SSGYGLNFGGH 274
           G G  G   G  G G G  G Y    GGY  S GYG   GG+
Sbjct: 122 GGGFGGGGYGGGGGGYGGSGGYGGGAGGYGGSGGYGGGAGGY 163



 Score = 28.3 bits (60), Expect = 5.0
 Identities = 22/45 (48%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
 Frame = +2

Query: 149 GYGYGIDGLDVGYIGHGQGLGGAYNY-VDGGY---SSGYGLNFGG 271
           G GYG  G   GY G G   GGA  Y   GGY   + GYG N GG
Sbjct: 127 GGGYGGGG--GGYGGSGGYGGGAGGYGGSGGYGGGAGGYGGNSGG 169



 Score = 28.3 bits (60), Expect = 5.0
 Identities = 16/41 (39%), Positives = 18/41 (43%)
 Frame = +2

Query: 149 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 271
           GYG G  G   G  G+G G GG      GGY       +GG
Sbjct: 142 GYGGGAGGYG-GSGGYGGGAGGYGGNSGGGYGGNAAGGYGG 181



 Score = 27.9 bits (59), Expect = 6.7
 Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
 Frame = +2

Query: 149 GYGYGIDGLDVGYIGHGQGLGGAYNY--VDGGYSSGYGLNFGGH 274
           G GYG  G   GY G   G GG+  Y    GGY    G  +GG+
Sbjct: 134 GGGYGGSG---GYGGGAGGYGGSGGYGGGAGGYGGNSGGGYGGN 174


>At4g39260.4 68417.m05560 glycine-rich RNA-binding protein 8 (GRP8)
           (CCR1) SP|Q03251 Glycine-rich RNA-binding protein 8
           (CCR1 protein) (GRP8) {Arabidopsis thaliana} isoform
           contains a non-consensus CG acceptor splice site at
           intron 2
          Length = 105

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +2

Query: 191 GHGQGLGGAYNYVDGGYSSGYGLNFGG 271
           G G+G GG      GGY  G G ++GG
Sbjct: 74  GGGRGYGGGGRREGGGYGGGDGGSYGG 100


>At4g35785.2 68417.m05083 transformer serine/arginine-rich
           ribonucleoprotein, putative similar to transformer-SR
           ribonucleoprotein [Nicotiana tabacum]
           gi|1781299|emb|CAA70700
          Length = 141

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
 Frame = +1

Query: 376 RQGSRAPTLRGRQTRAISREGVR*GSRP----RSRAIPSRKEGALSRTRTS*QALPRQGA 543
           R+ SR+P+ R  + R+ SR   R  SRP    RSR++P     + SR R+  ++  R   
Sbjct: 8   RRDSRSPSPRKERARSRSRSRSRSRSRPRLRSRSRSLPRPVSPSRSRGRSRSRSRGRSEV 67

Query: 544 RAP 552
             P
Sbjct: 68  ENP 70


>At4g21620.1 68417.m03134 glycine-rich protein
          Length = 131

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +2

Query: 113 EKKLDKRGLLNLGYGYGIDGLDVGYI-GHGQGLGGAYNYVDGGYSSGYGLNFGG 271
           E    K G   LG+G G+ G   G+I G G G  G    V GGY  G+G   GG
Sbjct: 21  ESARQKSGNDGLGFG-GVPGS--GFIPGFGNGFPGTG--VGGGYGGGFGGPSGG 69


>At1g76930.2 68414.m08956 proline-rich extensin-like family protein
           contains extensin-like region, Pfam:PF04554
          Length = 256

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 20/47 (42%), Positives = 21/47 (44%)
 Frame = +2

Query: 320 PYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHVKEYVKVPVH 460
           P  V    P PV K  P PVK   P P  V K  P  VK Y   PV+
Sbjct: 31  PPPVKHYSPPPVYKSPPPPVKHYSPPP--VYKSPPPPVKHYSPPPVY 75



 Score = 28.3 bits (60), Expect = 5.0
 Identities = 20/47 (42%), Positives = 21/47 (44%)
 Frame = +2

Query: 320 PYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHVKEYVKVPVH 460
           P  V    P PV K  P PVK   P P  V K  P  VK Y   PV+
Sbjct: 103 PPPVKHYSPPPVYKSPPPPVKHYSPPP--VYKSPPPPVKHYSPPPVY 147


>At1g76930.1 68414.m08955 proline-rich extensin-like family protein
           contains extensin-like region, Pfam:PF04554
          Length = 293

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 20/47 (42%), Positives = 21/47 (44%)
 Frame = +2

Query: 320 PYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHVKEYVKVPVH 460
           P  V    P PV K  P PVK   P P  V K  P  VK Y   PV+
Sbjct: 31  PPPVKHYSPPPVYKSPPPPVKHYSPPP--VYKSPPPPVKHYSPPPVY 75



 Score = 28.3 bits (60), Expect = 5.0
 Identities = 20/47 (42%), Positives = 21/47 (44%)
 Frame = +2

Query: 320 PYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHVKEYVKVPVH 460
           P  V    P PV K  P PVK   P P  V K  P  VK Y   PV+
Sbjct: 103 PPPVKHYSPPPVYKSPPPPVKHYSPPP--VYKSPPPPVKHYSPPPVY 147


>At1g66820.1 68414.m07595 glycine-rich protein
          Length = 109

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +2

Query: 146 LGYGYGIDGLDVGYIGHGQGLGGAYNYVD 232
           LG+G G  G+  G+ G+G G+GG Y++ D
Sbjct: 76  LGFGIGC-GIGFGF-GYGFGVGGGYSFDD 102


>At1g47655.1 68414.m05294 Dof-type zinc finger domain-containing
           protein
          Length = 209

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +2

Query: 149 GYGYGIDGLDVGYIG 193
           GYGYG++ + +GY+G
Sbjct: 148 GYGYGLEEMSIGYLG 162


>At1g04800.1 68414.m00476 glycine-rich protein 
          Length = 200

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 17/34 (50%), Positives = 20/34 (58%)
 Frame = +2

Query: 149 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSG 250
           G+G GI G   G+ G G G GGA   VDGG+  G
Sbjct: 81  GFGGGIGG---GFGGGGFG-GGAGKGVDGGFGKG 110


>At5g51680.1 68418.m06407 hydroxyproline-rich glycoprotein family
           protein contains proline-rich extensin domains,
           INTERPRO:IPR002965; similar to hydroxyproline-rich
           Glycoprotein (HRGP) [Zea mays] gi|4007865|emb|CAA10387
          Length = 343

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
 Frame = +2

Query: 308 GVPVPYAVDRP--VPYP-VEKHVPYPVKVAVPQPYEVVKHVPYHVKE 439
           G P+P + + P  +P+P +E   P P+   VP P + V  VP+  +E
Sbjct: 74  GKPLPASSNDPPQLPHPPLETATPTPLPPPVPVPVKQVTSVPFDWEE 120


>At4g38680.1 68417.m05477 cold-shock DNA-binding family protein
           contains Pfam domains PF00313: 'Cold-shock' DNA-binding
           domain and PF00098: Zinc knuckle
          Length = 203

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 18/42 (42%), Positives = 18/42 (42%)
 Frame = +2

Query: 149 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGGH 274
           G GYG  G   GY G G G GG      GG  S Y     GH
Sbjct: 155 GGGYGGGG---GYGGGGGGYGGGGRGGGGGGGSCYSCGESGH 193


>At4g35785.1 68417.m05082 transformer serine/arginine-rich
           ribonucleoprotein, putative similar to transformer-SR
           ribonucleoprotein [Nicotiana tabacum]
           gi|1781299|emb|CAA70700
          Length = 140

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
 Frame = +1

Query: 376 RQGSRAPTLRGRQTRAISREGVR*GSRP----RSRAIPSRKEGALSRTRT 513
           R+ SR+P+ R  + R+ SR   R  SRP    RSR++P     + SR R+
Sbjct: 8   RRDSRSPSPRKERARSRSRSRSRSRSRPRLRSRSRSLPRPVSPSRSRGRS 57


>At3g54800.1 68416.m06064 pleckstrin homology (PH) domain-containing
           protein / lipid-binding START domain-containing protein
           contains Pfam profiles PF00169: Pleckstring homology
           (PH) domain, PF01852: Lipid-binding START domain
          Length = 733

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 9/51 (17%)
 Frame = -3

Query: 544 EHLDGVRPV-------NWYVYGI--RHLLFDWVWRGNVDGNLNVLLHVIWH 419
           EHLDG   +       +W  +G+  R LL    WR   DG   +L H ++H
Sbjct: 249 EHLDGHTDIIHLQLYSDWLPWGMNRRDLLLRRYWRREDDGTYVILCHSVYH 299


>At1g60890.1 68414.m06855 phosphatidylinositol-4-phosphate 5-kinase
           family protein similar to
           phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
           [Arabidopsis thaliana] GI:3702691; contains Pfam
           profiles PF01504: Phosphatidylinositol-4-phosphate
           5-Kinase, PF02493: MORN repeat
          Length = 769

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +2

Query: 119 KLDKRGLLNLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSG 250
           K+  RG+++   G   +G  +  + HG G+   Y Y DGG+  G
Sbjct: 139 KMSGRGVMSWANGDLFNGFWLNGLRHGSGV---YKYADGGFYFG 179


>At1g21310.1 68414.m02662 proline-rich extensin-like family protein
           contains extensin-like region, Pfam:PF04554
          Length = 431

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +2

Query: 314 PVPYAVDRPVPYPVEKHVPYPVKVAVPQP--YEVVKHVPYHVKEYVKVPVH 460
           P  + V +  P PV+ + P PV  + P P  + V K  P  VK Y   PV+
Sbjct: 88  PKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVY 138



 Score = 27.9 bits (59), Expect = 6.7
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +2

Query: 314 PVPYAVDRPVPYPVEKHVPYPVKVAVPQP--YEVVKHVPYHVKEYVKVPVH 460
           P  + V +  P PV+ + P PV  + P P  + V K  P  VK Y   PV+
Sbjct: 116 PKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVY 166



 Score = 27.9 bits (59), Expect = 6.7
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +2

Query: 314 PVPYAVDRPVPYPVEKHVPYPVKVAVPQP--YEVVKHVPYHVKEYVKVPVH 460
           P  + V +  P PV+ + P PV  + P P  + V K  P  VK Y   PV+
Sbjct: 144 PKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVY 194



 Score = 27.9 bits (59), Expect = 6.7
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +2

Query: 314 PVPYAVDRPVPYPVEKHVPYPVKVAVPQP--YEVVKHVPYHVKEYVKVPVH 460
           P  + V +  P PV+ + P PV  + P P  + V K  P  VK Y   PV+
Sbjct: 172 PKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVY 222



 Score = 27.9 bits (59), Expect = 6.7
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +2

Query: 314 PVPYAVDRPVPYPVEKHVPYPVKVAVPQP--YEVVKHVPYHVKEYVKVPVH 460
           P  + V +  P PV+ + P PV  + P P  + V K  P  VK Y   PV+
Sbjct: 200 PKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVY 250



 Score = 27.9 bits (59), Expect = 6.7
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +2

Query: 314 PVPYAVDRPVPYPVEKHVPYPVKVAVPQP--YEVVKHVPYHVKEYVKVPVH 460
           P  + V +  P PV+ + P PV  + P P  + V K  P  VK Y   PV+
Sbjct: 228 PKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVY 278



 Score = 27.9 bits (59), Expect = 6.7
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +2

Query: 314 PVPYAVDRPVPYPVEKHVPYPVKVAVPQP--YEVVKHVPYHVKEYVKVPVH 460
           P  + V +  P PV+ + P PV  + P P  + V K  P  VK Y   PV+
Sbjct: 256 PKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVY 306



 Score = 27.9 bits (59), Expect = 6.7
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +2

Query: 314 PVPYAVDRPVPYPVEKHVPYPVKVAVPQP--YEVVKHVPYHVKEYVKVPVH 460
           P  + V +  P PV+ + P PV  + P P  + V K  P  VK Y   PV+
Sbjct: 284 PKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVY 334



 Score = 27.9 bits (59), Expect = 6.7
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +2

Query: 314 PVPYAVDRPVPYPVEKHVPYPVKVAVPQP--YEVVKHVPYHVKEYVKVPVH 460
           P  + V +  P PV+ + P PV  + P P  + V K  P  VK Y   PV+
Sbjct: 312 PKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVY 362



 Score = 27.9 bits (59), Expect = 6.7
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +2

Query: 314 PVPYAVDRPVPYPVEKHVPYPVKVAVPQP--YEVVKHVPYHVKEYVKVPVH 460
           P  + V +  P PV+ + P PV  + P P  + V K  P  VK Y   PV+
Sbjct: 340 PKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVY 390


>At4g28100.1 68417.m04031 expressed protein
          Length = 304

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +3

Query: 600 CPNLTPWRNTCHTPSKLRCPYRSPTP 677
           CP L  W    H  S L+ P  +PTP
Sbjct: 72  CPVLAAWLFAAHARSALQLPAPAPTP 97


>At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid
           transfer protein (LTP) family protein identical to
           pEARLI 1 (Accession No. L43080): an Arabidopsis member
           of a conserved gene family (PGF95-099), Plant Physiol.
           109 (4), 1497 (1995); contains Pfam protease
           inhibitor/seed storage/LTP family domain PF00234
          Length = 168

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 15/32 (46%), Positives = 17/32 (53%)
 Frame = +2

Query: 305 KGVPVPYAVDRPVPYPVEKHVPYPVKVAVPQP 400
           K  PVP    +PVP P  K VP P   +VP P
Sbjct: 35  KHKPVPSPKPKPVPSPKPKPVPSP---SVPSP 63


>At3g24760.1 68416.m03108 F-box family protein   ; similar to SKP1
           interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250
          Length = 383

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = +3

Query: 273 IPTSPRPSPSSKASLYL--TPSTDPFHTQ 353
           +P SP PSPSS   L+L    +T  FH Q
Sbjct: 50  LPPSPSPSPSSPPWLFLFGIHNTSSFHNQ 78


>At3g07560.1 68416.m00903 glycine-rich protein
          Length = 304

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 15/38 (39%), Positives = 16/38 (42%)
 Frame = +2

Query: 155 GYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFG 268
           GYG  GL      +G G  G Y    GGY  G G   G
Sbjct: 128 GYGGGGLYGSSGMYGGGAMGGYGGTMGGYGMGMGTGMG 165


>At2g04190.1 68415.m00404 meprin and TRAF homology domain-containing
           protein / MATH domain-containing protein similar to
           ubiquitin-specific protease 12 [Arabidopsis thaliana]
           GI:11993471; contains Pfam profile PF00917: MATH domain
          Length = 411

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = +2

Query: 149 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG--H-TDVTKTI 295
           G G+   G   G  G+G G G    Y  GG   GYG   GG  H  +VT+T+
Sbjct: 64  GPGFFFGGAGPGP-GYGGGGGHGPGYGGGGDGRGYGSETGGGNHGPEVTRTL 114


>At1g17640.1 68414.m02183 RNA recognition motif (RRM)-containing
           protein similar to GB:L02953 from [Xenopus laevis]
           (Nucleic Acids Res. 21, 999-1006 (1993)); contains
           InterPro entry IPR000504: RNA-binding region RNP-1 (RNA
           recognition motif) (RRM)
          Length = 369

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +2

Query: 149 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 271
           GYGYG    ++GY     G GG Y+++  GY       +GG
Sbjct: 303 GYGYGGQMFNMGY-----GAGG-YSHMGSGYGVAAAAAYGG 337


>At1g16210.1 68414.m01941 expressed protein ESTs gb|T04357 and
           gb|AA595092 come from this gene
          Length = 234

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = +1

Query: 367 ALSRQGSRAPTLRGRQTRAISREGVR*GSRPRSRAIPSRKEGALSRTRTS 516
           A SR+ +     + RQTR    +  R    P+S+A+  R+E A  +  T+
Sbjct: 14  AKSRKNAAEAEQKDRQTREKEEQYWREAEGPKSKAVKKREEEAEKKAETA 63


>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
           extensin family protein contains similarity to disease
           resistance protein GI:3894383 from [Lycopersicon
           esculentum]; contains leucine-rich repeats,
           Pfam:PF00560; contains proline rich extensin domains,
           INTERPRO:IPR002965
          Length = 847

 Score = 24.2 bits (50), Expect(2) = 9.2
 Identities = 18/73 (24%), Positives = 30/73 (41%)
 Frame = +3

Query: 285 PRPSPSSKASLYLTPSTDPFHTQLRSTCLIPSR*PCPNPTRSSNTCHIT*RSTLRFPSTF 464
           P PS  S  S  L+P   P   Q  +    P++ P P+ + S    ++   S ++ P+  
Sbjct: 669 PTPSSESDQSQILSPVQAPTPVQSSTPSSEPTQVPTPSSSESYQAPNL---SPVQAPTPV 725

Query: 465 PRHTQSKRRCLIP 503
              T S     +P
Sbjct: 726 QAPTTSSETSQVP 738



 Score = 21.4 bits (43), Expect(2) = 9.2
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +3

Query: 612 TPWRNTCHTPSKLRCPYRSPTP 677
           TP     H P+    P +SPTP
Sbjct: 753 TPILEPVHAPTPNSKPVQSPTP 774


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,416,605
Number of Sequences: 28952
Number of extensions: 290973
Number of successful extensions: 1437
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 1030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1343
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1457719448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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