Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0026
(630 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 192 1e-49
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 192 2e-49
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 192 2e-49
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 190 5e-49
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 190 9e-49
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 190 9e-49
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 187 5e-48
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 187 5e-48
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 187 5e-48
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 173 8e-44
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 164 5e-41
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 163 9e-41
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 116 2e-26
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 97 1e-20
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 87 9e-18
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 70 1e-12
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 64 1e-10
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 62 2e-10
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 49 3e-06
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.089
At3g51940.1 68416.m05697 expressed protein 30 1.5
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 29 2.5
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 29 2.5
At5g50400.1 68418.m06242 calcineurin-like phosphoesterase family... 29 2.5
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 3.4
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 3.4
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 28 4.4
At5g40350.1 68418.m04895 myb family transcription factor (MYB24)... 28 5.9
At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 28 5.9
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 7.8
At4g30070.1 68417.m04277 plant defensin-fusion protein, putative... 27 7.8
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 192 bits (469), Expect = 1e-49
Identities = 92/112 (82%), Positives = 95/112 (84%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 431
+RGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 432 QIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTSATVSSTPCPFTKGYALP 587
QIMFETFNTPAMYVAIQAVLSLYASG S S P +GYALP
Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALP 174
Score = 110 bits (265), Expect = 6e-25
Identities = 50/59 (84%), Positives = 54/59 (91%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 192 bits (468), Expect = 2e-49
Identities = 92/112 (82%), Positives = 94/112 (83%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 431
+RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 432 QIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTSATVSSTPCPFTKGYALP 587
QIMFETFNTPAMYVAIQAVLSLYASG S S P +GYALP
Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALP 174
Score = 110 bits (265), Expect = 6e-25
Identities = 50/59 (84%), Positives = 54/59 (91%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 192 bits (468), Expect = 2e-49
Identities = 92/112 (82%), Positives = 94/112 (83%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 431
+RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 432 QIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTSATVSSTPCPFTKGYALP 587
QIMFETFNTPAMYVAIQAVLSLYASG S S P +GYALP
Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALP 174
Score = 110 bits (265), Expect = 6e-25
Identities = 50/59 (84%), Positives = 54/59 (91%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 190 bits (464), Expect = 5e-49
Identities = 91/112 (81%), Positives = 94/112 (83%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 431
+RGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 432 QIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTSATVSSTPCPFTKGYALP 587
QIMFETFN PAMYVAIQAVLSLYASG S S P +GYALP
Sbjct: 123 QIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALP 174
Score = 110 bits (265), Expect = 6e-25
Identities = 50/59 (84%), Positives = 54/59 (91%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 190 bits (462), Expect = 9e-49
Identities = 90/112 (80%), Positives = 93/112 (83%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 431
+RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
Query: 432 QIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTSATVSSTPCPFTKGYALP 587
QIMFETFN PAMYVAIQAVLSLYASG S S P +GYALP
Sbjct: 123 QIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALP 174
Score = 110 bits (265), Expect = 6e-25
Identities = 50/59 (84%), Positives = 54/59 (91%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 190 bits (462), Expect = 9e-49
Identities = 90/112 (80%), Positives = 93/112 (83%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 431
+RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
Query: 432 QIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTSATVSSTPCPFTKGYALP 587
QIMFETFN PAMYVAIQAVLSLYASG S S P +GYALP
Sbjct: 123 QIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALP 174
Score = 110 bits (265), Expect = 6e-25
Identities = 50/59 (84%), Positives = 54/59 (91%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 187 bits (456), Expect = 5e-48
Identities = 87/112 (77%), Positives = 95/112 (84%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 431
+RGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 432 QIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTSATVSSTPCPFTKGYALP 587
QIMFETFN+PAMYVAIQAVLSLYASG S S P +G++LP
Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLP 174
Score = 106 bits (254), Expect = 1e-23
Identities = 46/59 (77%), Positives = 53/59 (89%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSK
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 187 bits (456), Expect = 5e-48
Identities = 87/112 (77%), Positives = 95/112 (84%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 431
+RGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 432 QIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTSATVSSTPCPFTKGYALP 587
QIMFETFN+PAMYVAIQAVLSLYASG S S P +G++LP
Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLP 174
Score = 106 bits (254), Expect = 1e-23
Identities = 46/59 (77%), Positives = 53/59 (89%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSK
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 187 bits (456), Expect = 5e-48
Identities = 87/112 (77%), Positives = 95/112 (84%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 431
+RGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 432 QIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTSATVSSTPCPFTKGYALP 587
QIMFETFN+PAMYVAIQAVLSLYASG S S P +G++LP
Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLP 174
Score = 106 bits (254), Expect = 1e-23
Identities = 46/59 (77%), Positives = 53/59 (89%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSK
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 173 bits (421), Expect = 8e-44
Identities = 79/112 (70%), Positives = 90/112 (80%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 431
+RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMT
Sbjct: 64 RRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMT 123
Query: 432 QIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTSATVSSTPCPFTKGYALP 587
QIMFE+F P+MY+ IQAVLSLY+SG S S P +GYALP
Sbjct: 124 QIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHTVPIYEGYALP 175
Score = 102 bits (245), Expect = 2e-22
Identities = 44/59 (74%), Positives = 54/59 (91%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQAR 64
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 164 bits (398), Expect = 5e-41
Identities = 85/131 (64%), Positives = 95/131 (72%), Gaps = 1/131 (0%)
Frame = +3
Query: 198 RDGRYGTEGLLCRR*GTEQRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 377
RDG E + G R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYVGEE-GHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 378 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG-VPPVSCWTSATVSST 554
VLLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL LY+SG V VS T
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHT 153
Query: 555 PCPFTKGYALP 587
P +GYALP
Sbjct: 154 -VPVYEGYALP 163
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/53 (50%), Positives = 36/53 (67%)
Frame = +1
Query: 94 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 252
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E +
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHA 51
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 163 bits (396), Expect = 9e-41
Identities = 76/110 (69%), Positives = 88/110 (80%)
Frame = +3
Query: 258 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 437
GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+REKMTQI
Sbjct: 20 GILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREKMTQI 79
Query: 438 MFETFNTPAMYVAIQAVLSLYASGVPPVSCWTSATVSSTPCPFTKGYALP 587
MFETF P+MY+ +QA LSL+ASG + S S P +G ALP
Sbjct: 80 MFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIVPIYEGSALP 129
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 116 bits (278), Expect = 2e-26
Identities = 52/114 (45%), Positives = 71/114 (62%)
Frame = +3
Query: 246 TEQRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 425
+E R L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREK
Sbjct: 60 SELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREK 119
Query: 426 MTQIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTSATVSSTPCPFTKGYALP 587
M + MFE +N +++ IQAVL+LYA G+ S + P GY+ P
Sbjct: 120 MIETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFP 173
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +1
Query: 94 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGD 240
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGE 57
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 96.7 bits (230), Expect = 1e-20
Identities = 44/92 (47%), Positives = 59/92 (64%)
Frame = +3
Query: 270 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 449
L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL P +RE +I+FET
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFET 145
Query: 450 FNTPAMYVAIQAVLSLYASGVPPVSCWTSATV 545
FN P +Y+A+ +VL+L A+G C + V
Sbjct: 146 FNVPGLYIAVNSVLAL-AAGYTTSKCEMTGVV 176
Score = 35.9 bits (79), Expect = 0.022
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 91 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 177
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 515 TGIVLDFGDGVFHTVPIYE 571
TG+V+D GDG H VP+ E
Sbjct: 173 TGVVVDVGDGATHVVPVAE 191
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 87.0 bits (206), Expect = 9e-18
Identities = 41/102 (40%), Positives = 60/102 (58%)
Frame = +3
Query: 279 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 458
PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK ++MFE +
Sbjct: 94 PIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAAELMFEKYKV 153
Query: 459 PAMYVAIQAVLSLYASGVPPVSCWTSATVSSTPCPFTKGYAL 584
PA+++A VL+ +A+G S+T P GY L
Sbjct: 154 PALFMAKNPVLTSFATGRATSLVVDCGGGSTTISPVHDGYVL 195
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 180
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 69.7 bits (163), Expect = 1e-12
Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +3
Query: 279 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 455
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 456 TPAMYVAIQAVLSLYASG 509
Y + QAVLSLYA G
Sbjct: 117 VSGFYASEQAVLSLYAVG 134
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 91 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 183
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 63.7 bits (148), Expect = 1e-10
Identities = 35/112 (31%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Frame = +3
Query: 270 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 449
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 450 FNTPAMYVA-IQAVLSLYASGVPPVSCWTSATVS-STPCPFTKGYALPPRHS 599
F ++Y+A Q+++ LY + P S + S C F+ +A+P H+
Sbjct: 121 FGFSSLYIAHPQSLVHLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPVLHN 172
Score = 32.7 bits (71), Expect = 0.21
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 94 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 186
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 62.5 bits (145), Expect = 2e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 425
+R + + P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 8e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 180
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 279 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 455
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 456 TPAMYVAIQAVLS 494
PA+ + A S
Sbjct: 145 VPAVAFGVDAAFS 157
Score = 44.0 bits (99), Expect = 8e-05
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +1
Query: 94 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 240
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.089
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -2
Query: 215 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 78
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At3g51940.1 68416.m05697 expressed protein
Length = 453
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -2
Query: 566 KWARCGRH-RRRSPARYRWYAGRVQREHGLDG 474
KW RH RRRSP RWY+GR DG
Sbjct: 3 KWNHRSRHHRRRSPE--RWYSGRQSSSSSDDG 32
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 10/67 (14%)
Frame = +3
Query: 336 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 485
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 486 VLSLYAS 506
VL+LYA+
Sbjct: 241 VLALYAA 247
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 10/67 (14%)
Frame = +3
Query: 336 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 485
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 486 VLSLYAS 506
VL+LYA+
Sbjct: 241 VLALYAA 247
>At5g50400.1 68418.m06242 calcineurin-like phosphoesterase family
protein contains Pfam profile: PF00149 calcineurin-like
phosphoesterase
Length = 611
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -2
Query: 605 TQGMAWGKCVSFRKWARCGRHRRRSPA 525
T G G+ V F +W+R G RRSPA
Sbjct: 187 TSGYNIGEAVPFVEWSRKGTRSRRSPA 213
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 264 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 425
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 264 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 425
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +2
Query: 392 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRAL 493
GSP+ +G + E+D D + NI+H + +H + A+
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAM 127
>At5g40350.1 68418.m04895 myb family transcription factor (MYB24)
similar to Myb26 GI:1841475 from [Pisum sativum]
Length = 214
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -3
Query: 589 GGSAYPFVNGHGVEDTVAEVQHDTGGTPDAYSESTAWM-ATYMAGVLNVSNMI 434
G + F+N H T + V +DT T D YS +T++ A+ + LN N +
Sbjct: 131 GSQSSEFINHHA---TTSHVMNDTQETMDMYSPTTSYQHASNINQQLNYGNYV 180
>At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein
contains Pfam PF01422: NF-X1 type zinc finger; similar
to transcriptional repressor NF-X1 (SP:Q12986) [Homo
sapiens]; similar to EST gb|T21002
Length = 1188
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = +3
Query: 513 PPVSCWTSATVSSTPCPFTKGYALPPRHSLRFGT*P 620
PP+SC T PCP + H FG P
Sbjct: 647 PPLSCGTPVPSCQLPCPIPQPCGHSDTHGCHFGDCP 682
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -2
Query: 191 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 69
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At4g30070.1 68417.m04277 plant defensin-fusion protein, putative
contains a C-terminal plant defensin domain, personal
communication, Bart Thomma
(Bart.Thomma@agr.kuleuven.ac.be)
Length = 129
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 268 VRIPLCSVPHLLHKSPSVPYRPSRPDGGA 182
V +PLC + PS P P + DGGA
Sbjct: 59 VGVPLCKCYYECESPPSPPAPPKKCDGGA 87
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,293,319
Number of Sequences: 28952
Number of extensions: 394528
Number of successful extensions: 1238
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1222
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1285411824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -