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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0019
         (800 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g73250.1 68414.m08477 GDP-4-keto-6-deoxy-D-mannose-3,5-epimer...   105   5e-23
At1g17890.3 68414.m02214 GDP-4-keto-6-deoxy-D-mannose-3,5-epimer...   104   6e-23
At1g17890.2 68414.m02213 GDP-4-keto-6-deoxy-D-mannose-3,5-epimer...   104   6e-23
At1g17890.1 68414.m02215 GDP-4-keto-6-deoxy-D-mannose-3,5-epimer...   104   6e-23
At4g00110.1 68417.m00011 NAD-dependent epimerase/dehydratase fam...    46   3e-05
At2g45310.1 68415.m05639 NAD-dependent epimerase/dehydratase fam...    45   5e-05
At1g02000.1 68414.m00118 NAD-dependent epimerase/dehydratase fam...    45   5e-05
At4g30440.1 68417.m04323 NAD-dependent epimerase/dehydratase fam...    42   4e-04
At3g23820.1 68416.m02994 NAD-dependent epimerase/dehydratase fam...    41   8e-04
At5g28840.1 68418.m03547 NAD-dependent epimerase/dehydratase fam...    39   0.004
At1g12780.1 68414.m01484 UDP-glucose 4-epimerase / UDP-galactose...    39   0.004
At4g12250.1 68417.m01942 NAD-dependent epimerase/dehydratase fam...    38   0.008
At1g63180.1 68414.m07140 UDP-glucose 4-epimerase, putative / UDP...    37   0.014
At1g53500.1 68414.m06066 NAD-dependent epimerase/dehydratase fam...    34   0.13 
At1g63000.1 68414.m07114 expressed protein                             33   0.22 
At1g64440.1 68414.m07304 UDP-glucose 4-epimerase, putative / UDP...    33   0.29 
At4g23920.1 68417.m03440 UDP-glucose 4-epimerase, putative / UDP...    31   0.89 
At4g10960.1 68417.m01781 UDP-glucose 4-epimerase, putative / UDP...    31   0.89 
At1g01780.1 68414.m00097 LIM domain-containing protein similar t...    30   1.6  
At3g14790.1 68416.m01869 NAD-dependent epimerase/dehydratase fam...    30   2.1  
At1g78570.1 68414.m09157 NAD-dependent epimerase/dehydratase fam...    30   2.1  
At5g02880.1 68418.m00231 HECT-domain-containing protein / ubiqui...    29   3.6  
At4g19280.1 68417.m02842 hypothetical protein                          28   6.3  
At2g35110.1 68415.m04307 HEM protein-related weak similarity to ...    28   6.3  
At2g02400.1 68415.m00180 cinnamoyl-CoA reductase family similar ...    28   6.3  
At5g52860.1 68418.m06561 ABC transporter family protein                28   8.3  

>At1g73250.1 68414.m08477
           GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase
           (GER1) identical to
           GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase
           (GER1)GI:6016479 from [Arabidopsis thaliana]
          Length = 323

 Score =  105 bits (251), Expect = 5e-23
 Identities = 57/184 (30%), Positives = 95/184 (51%)
 Frame = +2

Query: 227 DLRDKTQTEALFAKHKPTHVIHLAAMVGGLFHNMAHNLDFFRENMSINDNILQACHKYNV 406
           DL  +   E+ F++ KP +VI  AA VGG+  N  +  DF   N+ I  N++ + +++ V
Sbjct: 53  DLTRQADVESFFSQEKPVYVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYEHGV 112

Query: 407 KKVVSCLSTCIFPDKTTYPIDETMVHNGPPHSSNFGYSYAKRMIDVLNRGYNESYGCMFT 586
           KK++   S+CI+P     PI E+ +       +N  Y+ AK       + Y   +G    
Sbjct: 113 KKLLFLGSSCIYPKFAPQPIPESALLTASLEPTNEWYAIAKIAGIKTCQAYRIQHGWDAI 172

Query: 587 SVIPCNVFGPHDNFSLKSSHVIPALIRRMDDAMQKGDPTFXSDGEAXNHSDSLFIHXISA 766
           S +P N++GP+DNF  ++SHV+PAL+RR  +A   G       G      + L +  ++ 
Sbjct: 173 SGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAEEVVVWGTGSPLREFLHVDDLAD 232

Query: 767 SCSF 778
           +C F
Sbjct: 233 ACVF 236


>At1g17890.3 68414.m02214
           GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase,
           putative similar to
           GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase
           (GER1)GI:6016479 from [Arabidopsis thaliana]
          Length = 320

 Score =  104 bits (250), Expect = 6e-23
 Identities = 57/184 (30%), Positives = 94/184 (51%)
 Frame = +2

Query: 227 DLRDKTQTEALFAKHKPTHVIHLAAMVGGLFHNMAHNLDFFRENMSINDNILQACHKYNV 406
           DL  ++  E+ FA  KP +VI  AA VGG+  N  +  DF   N+ I  N++ + + + V
Sbjct: 48  DLTSQSDVESFFATEKPVYVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYTHGV 107

Query: 407 KKVVSCLSTCIFPDKTTYPIDETMVHNGPPHSSNFGYSYAKRMIDVLNRGYNESYGCMFT 586
           KK++   S+CI+P     PI E+ +  GP   +N  Y+ AK     + + Y   +     
Sbjct: 108 KKLLFLGSSCIYPKFAPQPIPESALLTGPLEPTNEWYAIAKIAGIKMCQAYRLQHQWDAI 167

Query: 587 SVIPCNVFGPHDNFSLKSSHVIPALIRRMDDAMQKGDPTFXSDGEAXNHSDSLFIHXISA 766
           S +P N++G +DNF  ++SHV+PAL+RR  +A           G      + L +  ++ 
Sbjct: 168 SGMPTNLYGQNDNFHPENSHVLPALMRRFHEAKANNADEVVVWGSGSPLREFLHVDDLAD 227

Query: 767 SCSF 778
           +C F
Sbjct: 228 ACVF 231


>At1g17890.2 68414.m02213
           GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase,
           putative similar to
           GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase
           (GER1)GI:6016479 from [Arabidopsis thaliana]
          Length = 320

 Score =  104 bits (250), Expect = 6e-23
 Identities = 57/184 (30%), Positives = 94/184 (51%)
 Frame = +2

Query: 227 DLRDKTQTEALFAKHKPTHVIHLAAMVGGLFHNMAHNLDFFRENMSINDNILQACHKYNV 406
           DL  ++  E+ FA  KP +VI  AA VGG+  N  +  DF   N+ I  N++ + + + V
Sbjct: 48  DLTSQSDVESFFATEKPVYVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYTHGV 107

Query: 407 KKVVSCLSTCIFPDKTTYPIDETMVHNGPPHSSNFGYSYAKRMIDVLNRGYNESYGCMFT 586
           KK++   S+CI+P     PI E+ +  GP   +N  Y+ AK     + + Y   +     
Sbjct: 108 KKLLFLGSSCIYPKFAPQPIPESALLTGPLEPTNEWYAIAKIAGIKMCQAYRLQHQWDAI 167

Query: 587 SVIPCNVFGPHDNFSLKSSHVIPALIRRMDDAMQKGDPTFXSDGEAXNHSDSLFIHXISA 766
           S +P N++G +DNF  ++SHV+PAL+RR  +A           G      + L +  ++ 
Sbjct: 168 SGMPTNLYGQNDNFHPENSHVLPALMRRFHEAKANNADEVVVWGSGSPLREFLHVDDLAD 227

Query: 767 SCSF 778
           +C F
Sbjct: 228 ACVF 231


>At1g17890.1 68414.m02215
           GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase,
           putative similar to
           GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase
           (GER1)GI:6016479 from [Arabidopsis thaliana]
          Length = 328

 Score =  104 bits (250), Expect = 6e-23
 Identities = 57/184 (30%), Positives = 94/184 (51%)
 Frame = +2

Query: 227 DLRDKTQTEALFAKHKPTHVIHLAAMVGGLFHNMAHNLDFFRENMSINDNILQACHKYNV 406
           DL  ++  E+ FA  KP +VI  AA VGG+  N  +  DF   N+ I  N++ + + + V
Sbjct: 56  DLTSQSDVESFFATEKPVYVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYTHGV 115

Query: 407 KKVVSCLSTCIFPDKTTYPIDETMVHNGPPHSSNFGYSYAKRMIDVLNRGYNESYGCMFT 586
           KK++   S+CI+P     PI E+ +  GP   +N  Y+ AK     + + Y   +     
Sbjct: 116 KKLLFLGSSCIYPKFAPQPIPESALLTGPLEPTNEWYAIAKIAGIKMCQAYRLQHQWDAI 175

Query: 587 SVIPCNVFGPHDNFSLKSSHVIPALIRRMDDAMQKGDPTFXSDGEAXNHSDSLFIHXISA 766
           S +P N++G +DNF  ++SHV+PAL+RR  +A           G      + L +  ++ 
Sbjct: 176 SGMPTNLYGQNDNFHPENSHVLPALMRRFHEAKANNADEVVVWGSGSPLREFLHVDDLAD 235

Query: 767 SCSF 778
           +C F
Sbjct: 236 ACVF 239


>At4g00110.1 68417.m00011 NAD-dependent epimerase/dehydratase family
           protein similar to nucleotide sugar epimerase from
           Vibrio vulnificus GI:3093975 [PID:g3093975], WbnF
           [Escherichia coli] GI:5739472, CAPI protein
           {Staphylococcus aureus} SP|P39858; contains Pfam profile
           PF01370 NAD dependent epimerase/dehydratase family
          Length = 430

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 1/133 (0%)
 Frame = +2

Query: 221 DGDLRDKTQTEALFAKHKPTHVIHLAAMVGGLFHNMAHNLDFFRENMSINDNILQACHKY 400
           +GD+ D    + LF     THV+HLAA   G+ + M +   +   N++   N+L+ C   
Sbjct: 148 EGDINDAALLKKLFEVVPFTHVMHLAAQ-AGVRYAMENPSSYVHSNIAGFVNLLEVCKSA 206

Query: 401 NVK-KVVSCLSTCIFPDKTTYPIDETMVHNGPPHSSNFGYSYAKRMIDVLNRGYNESYGC 577
           N +  +V   S+ ++   T  P  E    + P       Y+  K+  + +   YN  YG 
Sbjct: 207 NPQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASL----YAATKKAGEEIAHTYNHIYGL 262

Query: 578 MFTSVIPCNVFGP 616
             T +    V+GP
Sbjct: 263 SLTGLRFFTVYGP 275


>At2g45310.1 68415.m05639 NAD-dependent epimerase/dehydratase family
           protein similar to nucleotide sugar epimerase from
           Vibrio vulnificus GI:3093975 [PID:g3093975], WbnF
           [Escherichia coli] GI:5739472, CAPI protein
           {Staphylococcus aureus} SP|P39858; contains Pfam profile
           PF01370 NAD dependent epimerase/dehydratase family
          Length = 437

 Score = 45.2 bits (102), Expect = 5e-05
 Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 1/133 (0%)
 Frame = +2

Query: 221 DGDLRDKTQTEALFAKHKPTHVIHLAAMVGGLFHNMAHNLDFFRENMSINDNILQACHKY 400
           +GD+ D      LF     THV+HLAA   G+ + M +   +   N++   N+L+ C   
Sbjct: 154 EGDINDVELLRKLFKIVSFTHVMHLAAQ-AGVRYAMENPSSYVHSNIAGFVNLLEICKSV 212

Query: 401 NVK-KVVSCLSTCIFPDKTTYPIDETMVHNGPPHSSNFGYSYAKRMIDVLNRGYNESYGC 577
           N +  +V   S+ ++   T  P  E    + P       Y+  K+  + +   YN  YG 
Sbjct: 213 NPQPAIVWASSSSVYGLNTKVPFSEKDKTDQPASL----YAATKKAGEEIAHTYNHIYGL 268

Query: 578 MFTSVIPCNVFGP 616
             T +    V+GP
Sbjct: 269 SLTGLRFFTVYGP 281


>At1g02000.1 68414.m00118 NAD-dependent epimerase/dehydratase family
           protein similar to nucleotide sugar epimerase from
           Vibrio vulnificus GI:3093975 [PID:g3093975], WbnF
           [Escherichia coli] GI:5739472, CAPI protein
           {Staphylococcus aureus} SP|P39858; contains Pfam profile
           PF01370 NAD dependent epimerase/dehydratase family
          Length = 434

 Score = 45.2 bits (102), Expect = 5e-05
 Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 1/133 (0%)
 Frame = +2

Query: 221 DGDLRDKTQTEALFAKHKPTHVIHLAAMVGGLFHNMAHNLDFFRENMSINDNILQACHKY 400
           +GD+ D +  + LF     THV+HLAA   G+ + M +   +   N++   N+L+ C   
Sbjct: 149 EGDINDLSLLKKLFEVVPFTHVMHLAAQ-AGVRYAMENPGSYVHSNIAGFVNLLEVCKSA 207

Query: 401 NVK-KVVSCLSTCIFPDKTTYPIDETMVHNGPPHSSNFGYSYAKRMIDVLNRGYNESYGC 577
           N +  +V   S+ ++   T  P  E    + P       Y+  K+  + +   YN  YG 
Sbjct: 208 NPQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASL----YAATKKAGEEIAHTYNHIYGL 263

Query: 578 MFTSVIPCNVFGP 616
             T +    V+GP
Sbjct: 264 SLTGLRFFTVYGP 276


>At4g30440.1 68417.m04323 NAD-dependent epimerase/dehydratase family
           protein similar to nucleotide sugar epimerase from
           Vibrio vulnificus GI:3093975 [PID:g3093975], WbnF
           [Escherichia coli] GI:5739472, CAPI protein
           {Staphylococcus aureus} SP|P39858; contains Pfam profile
           PF01370 NAD dependent epimerase/dehydratase family
          Length = 429

 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 1/133 (0%)
 Frame = +2

Query: 221 DGDLRDKTQTEALFAKHKPTHVIHLAAMVGGLFHNMAHNLDFFRENMSINDNILQACHKY 400
           +GDL D      LF     THV+HLAA   G+ + + +   +   N++   N+L+ C   
Sbjct: 145 EGDLNDAKLLAKLFDVVAFTHVMHLAAQ-AGVRYALENPQSYVHSNIAGLVNLLEICKAA 203

Query: 401 NVK-KVVSCLSTCIFPDKTTYPIDETMVHNGPPHSSNFGYSYAKRMIDVLNRGYNESYGC 577
           N +  +V   S+ ++      P  E+   + P       Y+  K+  + +   YN  YG 
Sbjct: 204 NPQPAIVWASSSSVYGLNEKVPFSESDRTDQPASL----YAATKKAGEEITHTYNHIYGL 259

Query: 578 MFTSVIPCNVFGP 616
             T +    V+GP
Sbjct: 260 AITGLRFFTVYGP 272


>At3g23820.1 68416.m02994 NAD-dependent epimerase/dehydratase family
           protein similar to nucleotide sugar epimerase from
           Vibrio vulnificus GI:3093975 [PID:g3093975], WbnF
           [Escherichia coli] GI:5739472, CAPI protein
           {Staphylococcus aureus} SP|P39858; contains Pfam
           profile: PF01370 NAD dependent epimerase/dehydratase
           family
          Length = 460

 Score = 41.1 bits (92), Expect = 8e-04
 Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 1/133 (0%)
 Frame = +2

Query: 221 DGDLRDKTQTEALFAKHKPTHVIHLAAMVGGLFHNMAHNLDFFRENMSINDNILQACHKY 400
           +GDL D      LF     TH++HLAA   G+ + M +   +   N++   N+L+     
Sbjct: 169 EGDLNDGPLLRKLFDVVPFTHILHLAAQ-AGVRYAMKNPQSYIASNIAGFVNLLEVAKAA 227

Query: 401 NVK-KVVSCLSTCIFPDKTTYPIDETMVHNGPPHSSNFGYSYAKRMIDVLNRGYNESYGC 577
           N +  +V   S+ ++   T  P  E    + P       Y+  K+  + +   YN  YG 
Sbjct: 228 NPQPAIVWASSSSVYGLNTENPFSEEHRTDQPASL----YAATKKAGEEIAHTYNHIYGL 283

Query: 578 MFTSVIPCNVFGP 616
             T +    V+GP
Sbjct: 284 SLTGLRFFTVYGP 296


>At5g28840.1 68418.m03547 NAD-dependent epimerase/dehydratase family
           protein similar to sugar epimerase BlmG from
           Streptomyces verticillus GI:9937230; contains Pfam
           profile PF01370 NAD dependent epimerase/dehydratase
           family
          Length = 377

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 2/114 (1%)
 Frame = +2

Query: 281 HVIHLAAMVGGLFHNMAHNLDFFRENMSINDNILQACHKYNVKKVVSCLSTCIFPDKTTY 460
           HV +LAA +GG+    +++      N  I+ N+++A     +K+     S CI+P+    
Sbjct: 94  HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQL 153

Query: 461 PIDETMVHNGP--PHSSNFGYSYAKRMIDVLNRGYNESYGCMFTSVIPCNVFGP 616
                 +      P      Y   K   + L + YN+ +G         N++GP
Sbjct: 154 ETTNVSLKESDAWPAEPQDAYGLEKLATEELCKHYNKDFGIECRIGRFHNIYGP 207


>At1g12780.1 68414.m01484 UDP-glucose 4-epimerase / UDP-galactose
           4-epimerase / Galactowaldenase identical to SP|Q42605
           [GB:CAA90941] from [Arabidopsis thaliana] (Arch.
           Biochem. Biophys. 327 (1), 27-34 (1996))
          Length = 351

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 24/83 (28%), Positives = 39/83 (46%)
 Frame = +2

Query: 224 GDLRDKTQTEALFAKHKPTHVIHLAAMVGGLFHNMAHNLDFFRENMSINDNILQACHKYN 403
           GDLR+K   E LF+K +   VIH A +   +  ++ +   +F  N+    N+ +   KYN
Sbjct: 67  GDLRNKGDIEKLFSKQRFDAVIHFAGL-KAVGESVENPRRYFDNNLVGTINLYETMAKYN 125

Query: 404 VKKVVSCLSTCIFPDKTTYPIDE 472
            K +V   S  ++      P  E
Sbjct: 126 CKMMVFSSSATVYGQPEKIPCME 148


>At4g12250.1 68417.m01942 NAD-dependent epimerase/dehydratase family
           protein similar to nucleotide sugar epimerase from
           Vibrio vulnificus GI:3093975 [PID:g3093975], WbnF
           [Escherichia coli] GI:5739472, CAPI protein
           {Staphylococcus aureus} SP|P39858; contains Pfam profile
           PF01370 NAD dependent epimerase/dehydratase family
          Length = 436

 Score = 37.9 bits (84), Expect = 0.008
 Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 1/133 (0%)
 Frame = +2

Query: 221 DGDLRDKTQTEALFAKHKPTHVIHLAAMVGGLFHNMAHNLDFFRENMSINDNILQACHKY 400
           +GD+ D      LF     THV+HLAA   G+ + M +   +   N++   N+L+     
Sbjct: 153 EGDINDAVLLRKLFDVVLFTHVMHLAAQ-AGVRYAMQNPGSYVNSNIAGFVNLLEVSKSA 211

Query: 401 NVK-KVVSCLSTCIFPDKTTYPIDETMVHNGPPHSSNFGYSYAKRMIDVLNRGYNESYGC 577
           N +  +V   S+ ++   +  P  E    + P       Y+  K+  + +   YN  YG 
Sbjct: 212 NPQPAIVWASSSSVYGLNSKVPFSEKDRTDQPASL----YAATKKAGEGIAHTYNHIYGL 267

Query: 578 MFTSVIPCNVFGP 616
             T +    V+GP
Sbjct: 268 SLTGLRFFTVYGP 280


>At1g63180.1 68414.m07140 UDP-glucose 4-epimerase, putative /
           UDP-galactose 4-epimerase, putative / Galactowaldenase,
           putative strong similarity to SP|Q42605 [GI:1143392]
           from [Arabidopsis thaliana] (Arch. Biochem. Biophys. 327
           (1), 27-34 (1996))
          Length = 351

 Score = 37.1 bits (82), Expect = 0.014
 Identities = 23/83 (27%), Positives = 38/83 (45%)
 Frame = +2

Query: 224 GDLRDKTQTEALFAKHKPTHVIHLAAMVGGLFHNMAHNLDFFRENMSINDNILQACHKYN 403
           GDLR+K   E LF+  +   VIH A +   +  ++ +   +F  N+    N+ +   KYN
Sbjct: 67  GDLRNKGDIEKLFSNQRFDAVIHFAGL-KAVGESVGNPRRYFDNNLVGTINLYETMAKYN 125

Query: 404 VKKVVSCLSTCIFPDKTTYPIDE 472
            K +V   S  ++      P  E
Sbjct: 126 CKMMVFSSSATVYGQPEIVPCVE 148


>At1g53500.1 68414.m06066 NAD-dependent epimerase/dehydratase family
           protein low similarity to dTDP-D-glucose-4,6-dehydratase
           from Aneurinibacillus thermoaerophilus GI:16357461,
           Sphingomonas sp. GI:1314581; contains Pfam profile
           PF01370: NAD dependent epimerase/dehydratase family;
           putative NDP-rhamnose synthase (rhm2 gene) GI:31559258
          Length = 667

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 4/117 (3%)
 Frame = +2

Query: 224 GDLRDKTQTEALFAKHKPTHVIHLAAMVG--GLFHNMAHNLDFFRENMSINDNILQACHK 397
           G L D+    A     KPTHV + A + G   +    +H  +  R N++    +   C +
Sbjct: 414 GRLEDRASLVADIRSIKPTHVFNAAGLTGRPNVDWCESHKPETIRVNVAGTLTLADVCRE 473

Query: 398 YNVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHSSNFG--YSYAKRMIDVLNRGYN 562
            N   +++  + CIF    T+P    +        + FG  YS  K M++ L R ++
Sbjct: 474 -NDLLMMNFATGCIFEYDATHPEGSGIGFKEEDKPNFFGSFYSKTKAMVEELLREFD 529


>At1g63000.1 68414.m07114 expressed protein
          Length = 301

 Score = 33.1 bits (72), Expect = 0.22
 Identities = 25/116 (21%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
 Frame = +2

Query: 224 GDLRDKTQTEALFAKHKPTHVIHLAAMVG--GLFHNMAHNLDFFRENMSINDNILQACHK 397
           G L+D+    A     KP+HV + A + G   +    +H ++  R N++    +   C +
Sbjct: 44  GRLQDRQSIVADIESVKPSHVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICRE 103

Query: 398 YNVKKVVSCLSTCIFPDKTTYPIDETM--VHNGPPHSSNFGYSYAKRMIDVLNRGY 559
             +  +++  + CIF   + +P+   +       P+ +   YS  K M++ L + Y
Sbjct: 104 KGL-VLINYATGCIFEYDSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNY 158


>At1g64440.1 68414.m07304 UDP-glucose 4-epimerase, putative /
           UDP-galactose 4-epimerase, putative / Galactowaldenase,
           putative similar to UDP-galactose 4-epimerase from
           Arabidopsis thaliana SP|Q42605, Cyamopsis tetragonoloba
           GI:3021357 [AJ005082] (Plant Sci. 142, 147-154 (1999))
          Length = 348

 Score = 32.7 bits (71), Expect = 0.29
 Identities = 19/72 (26%), Positives = 36/72 (50%)
 Frame = +2

Query: 227 DLRDKTQTEALFAKHKPTHVIHLAAMVGGLFHNMAHNLDFFRENMSINDNILQACHKYNV 406
           DLRDK   E +F++ K   V+H A +   +  ++A  L ++  N+     +L+    +  
Sbjct: 63  DLRDKPALEKVFSETKFDAVMHFAGL-KAVGESVAKPLLYYNNNLIATITLLEVMAAHGC 121

Query: 407 KKVVSCLSTCIF 442
           KK+V   S  ++
Sbjct: 122 KKLVFSSSATVY 133


>At4g23920.1 68417.m03440 UDP-glucose 4-epimerase, putative /
           UDP-galactose 4-epimerase, putative / Galactowaldenase,
           putative similar to UDP-galactose 4-epimerase from
           Arabidopsis thaliana SP|Q42605, Cyamopsis tetragonoloba
           GI:3021357 [AJ005082]
          Length = 350

 Score = 31.1 bits (67), Expect = 0.89
 Identities = 27/114 (23%), Positives = 48/114 (42%)
 Frame = +2

Query: 227 DLRDKTQTEALFAKHKPTHVIHLAAMVGGLFHNMAHNLDFFRENMSINDNILQACHKYNV 406
           DLRD+   E +F++ K   VIH A +   +  ++   L ++  N+     +L+   +Y  
Sbjct: 63  DLRDRPALEKIFSETKFDAVIHFAGL-KAVGESVEKPLLYYNNNIVGTVTLLEVMAQYGC 121

Query: 407 KKVVSCLSTCIFPDKTTYPIDETMVHNGPPHSSNFGYSYAKRMIDVLNRGYNES 568
           K +V   S  ++      P  E       P S+   Y   K  I+ + R  + S
Sbjct: 122 KNLVFSSSATVYGWPKEVPCTEE-----SPISATNPYGRTKLFIEEICRDVHRS 170


>At4g10960.1 68417.m01781 UDP-glucose 4-epimerase, putative /
           UDP-galactose 4-epimerase, putative / Galactowaldenase,
           putative similar to UDP-galactose 4-epimerase from
           Arabidopsis thaliana SP|Q42605, Cyamopsis tetragonoloba
           GI:3021357 [AJ005082]
          Length = 351

 Score = 31.1 bits (67), Expect = 0.89
 Identities = 19/82 (23%), Positives = 38/82 (46%)
 Frame = +2

Query: 227 DLRDKTQTEALFAKHKPTHVIHLAAMVGGLFHNMAHNLDFFRENMSINDNILQACHKYNV 406
           DLRD++  E +F++ K   VIH A +   +  ++   L ++  N+     +L+   ++  
Sbjct: 64  DLRDRSALEKIFSETKFDAVIHFAGL-KAVGESVEKPLLYYNNNLVGTITLLEVMAQHGC 122

Query: 407 KKVVSCLSTCIFPDKTTYPIDE 472
           K +V   S  ++      P  E
Sbjct: 123 KNLVFSSSATVYGSPKEVPCTE 144


>At1g01780.1 68414.m00097 LIM domain-containing protein similar to
           PGPS/D1 [Petunia x hybrida] GI:4105772, LIM domain
           protein PLIM1 [Nicotiana tabacum] GI:5932418; contains
           Pfam profile PF00412: LIM domain
          Length = 205

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 19/69 (27%), Positives = 29/69 (42%)
 Frame = +2

Query: 425 LSTCIFPDKTTYPIDETMVHNGPPHSSNFGYSYAKRMIDVLNRGYNESYGCMFTSVIPCN 604
           L  C   DKT Y +D   +   P H S F  ++ K  + + N  Y+   G ++       
Sbjct: 7   LDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSN--YSSMDGVLYCKTHFEQ 64

Query: 605 VFGPHDNFS 631
           +F    NFS
Sbjct: 65  LFKESGNFS 73


>At3g14790.1 68416.m01869 NAD-dependent epimerase/dehydratase family
           protein similar to dTDP-glucose 4,6-dehydratase from
           Aneurinibacillus thermoaerophilus GI:16357461,
           Saccharopolyspora spinosa GI:15077647, RmlB from
           Leptospira borgpetersenii GI:4234803; contains Pfam
           profile PF01370 NAD dependent epimerase/dehydratase
           family
          Length = 664

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 26/117 (22%), Positives = 49/117 (41%), Gaps = 4/117 (3%)
 Frame = +2

Query: 224 GDLRDKTQTEALFAKHKPTHVIHLAAMVG--GLFHNMAHNLDFFRENMSINDNILQACHK 397
           G L D+    A     KP+HV + A + G   +    +H  +  R N++    +   C +
Sbjct: 411 GRLEDRASLIADIRSIKPSHVFNAAGLTGRPNVDWCESHKTETIRVNVAGTLTLADVCRE 470

Query: 398 YNVKKVVSCLSTCIFPDKTTYPIDETM--VHNGPPHSSNFGYSYAKRMIDVLNRGYN 562
            N   +++  + CIF     +P    +       P+ +   YS  K M++ L R ++
Sbjct: 471 -NDLLMMNFATGCIFEYDAAHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREFD 526


>At1g78570.1 68414.m09157 NAD-dependent epimerase/dehydratase family
           protein similar to dTDP-glucose 4,6-dehydratase from
           Aneurinibacillus thermoaerophilus GI:16357461, RmlB from
           Leptospira borgpetersenii GI:4234803; contains Pfam
           profile PF01370 NAD dependent epimerase/dehydratase
           family
          Length = 669

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 25/117 (21%), Positives = 50/117 (42%), Gaps = 4/117 (3%)
 Frame = +2

Query: 224 GDLRDKTQTEALFAKHKPTHVIHLAAMVG--GLFHNMAHNLDFFRENMSINDNILQACHK 397
           G L D++         KPTHV + A + G   +    +H  +  R N++    +   C +
Sbjct: 416 GRLEDRSSLLQDIQSVKPTHVFNSAGVTGRPNVDWCESHKTETIRANVAGTLTLADVCRE 475

Query: 398 YNVKKVVSCLSTCIFPDKTTYPIDETM--VHNGPPHSSNFGYSYAKRMIDVLNRGYN 562
           + +  +++  + CIF     +P    +       P+ +   YS  K M++ L + Y+
Sbjct: 476 HGL-LMMNFATGCIFEYDDKHPEGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKEYD 531


>At5g02880.1 68418.m00231 HECT-domain-containing protein /
           ubiquitin-transferase family protein /
           armadillo/beta-catenin-like repeat-containing protein
           similar to SP|Q14669 Thyroid receptor interacting
           protein 12 (TRIP12) {Homo sapiens}; contains Pfam
           profiles PF00632: HECT-domain (ubiquitin-transferase),
           PF00514: Armadillo/beta-catenin-like repeat
          Length = 1502

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
 Frame = +2

Query: 404 VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHSSNFGYSYAKRMIDVLNRGYN--ESYGC 577
           +K V+  L      D       E+ + N P     FG      MI VLN G N   SYGC
Sbjct: 404 LKLVIELLPASPVEDNQLASEKESFLVNQPDLLQQFGRDMLPVMIQVLNSGANVYVSYGC 463

Query: 578 M 580
           +
Sbjct: 464 L 464


>At4g19280.1 68417.m02842 hypothetical protein 
          Length = 254

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
 Frame = +2

Query: 365 INDNILQACHKYNVKKVVSCLSTCIFPDKTTYPIDETM---VHNGPPHS 502
           I  NI + C    V  ++ CLSTC +  KT + + + +   + N PP S
Sbjct: 29  IVQNIERQCFN-TVLSIIICLSTCFYFSKTCFSVFKLLLVCLFNPPPFS 76


>At2g35110.1 68415.m04307 HEM protein-related weak similarity to
           Membrane-associated protein Hem (Dhem-2)
           (Swiss-Prot:P55162) [Drosophila melanogaster]; weak
           similarity to Nck-associated protein 1 (NAP 1)
           (p125Nap1) (Membrane-associated protein HEM-2)
           (Swiss-Prot:P55161) [Rattus norvegicus]
          Length = 1339

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 469 INRICCLIRKYACRETRYNLLYI 401
           ++R+CCL+RKY      Y L Y+
Sbjct: 478 MDRLCCLVRKYISAARGYALSYL 500


>At2g02400.1 68415.m00180 cinnamoyl-CoA reductase family similar to
           cinnamoyl-CoA reductase from Pinus taeda [GI:17978649],
           Eucalyptus gunnii [GI:2058311]
          Length = 318

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
 Frame = +2

Query: 374 NILQACHKYNVKKVV--SCLSTCI----FPDKTTYPIDETMVHN-GPPHSSNFGYSYAKR 532
           N+L+A  ++NV++VV  S +S  +    +P+K   P+DE+   +     S    Y  +K 
Sbjct: 106 NVLEAAKRFNVRRVVITSSISALVPNPNWPEKV--PVDESSWSDLDFCKSRQKWYPISKT 163

Query: 533 MIDVLNRGYNESYGCMFTSVIPCNVFGP 616
           + +     ++E +G    ++ P    GP
Sbjct: 164 LAEKAAWEFSEKHGTNIVTIHPSTCLGP 191


>At5g52860.1 68418.m06561 ABC transporter family protein 
          Length = 589

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -3

Query: 369 FIDIFSLKKSKLCAIL*NSPPTIAAKCITWV 277
           F+  FS+ K  L A+L N    +A+KC+ W+
Sbjct: 502 FMYFFSMYKYALDALLINEYSCLASKCLVWL 532


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,742,888
Number of Sequences: 28952
Number of extensions: 376165
Number of successful extensions: 874
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 860
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1814318400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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