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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10b07
         (720 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g19900.1 68417.m02916 glycosyl transferase-related contains P...    33   0.19 
At3g06435.1 68416.m00743 Expressed protein                             30   1.3  
At1g11430.1 68414.m01313 plastid developmental protein DAG, puta...    30   1.3  
At2g24450.1 68415.m02922 fasciclin-like arabinogalactan family p...    29   3.1  
At4g09500.2 68417.m01562 glycosyltransferase family protein cont...    28   5.4  
At4g09500.1 68417.m01561 glycosyltransferase family protein cont...    28   5.4  
At2g23410.1 68415.m02795 dehydrodolichyl diphosphate synthase / ...    28   5.4  
At4g02020.1 68417.m00272 zeste-like protein 1 (EZA1) identical t...    28   7.2  
At2g22930.1 68415.m02723 glycosyltransferase family protein cont...    28   7.2  
At1g72520.1 68414.m08386 lipoxygenase, putative similar to lipox...    28   7.2  
At3g62550.1 68416.m07027 universal stress protein (USP) family p...    27   9.5  
At3g29630.1 68416.m03726 glycosyltransferase family protein cont...    27   9.5  
At2g40040.1 68415.m04920 defective chloroplasts and leaves prote...    27   9.5  
At2g17210.1 68415.m01987 pentatricopeptide (PPR) repeat-containi...    27   9.5  
At1g30710.1 68414.m03754 FAD-binding domain-containing protein s...    27   9.5  

>At4g19900.1 68417.m02916 glycosyl transferase-related contains Pfam
           profiles PF01535: PPR repeat, PF04572: Alpha
           1,4-glycosyltransferase conserved region, PF04488:
           Glycosyltransferase sugar-binding region containing DXD
           motif; several hypothetical proteins - Arabidopsis
           thaliana
          Length = 1302

 Score = 33.1 bits (72), Expect = 0.19
 Identities = 13/36 (36%), Positives = 25/36 (69%)
 Frame = +2

Query: 368 LGLIEMFKDQFDNINVRNLIANNQTFDLVVVEAFAD 475
           LGLIE  ++ FD ++VR ++ ++ ++ L+V+  F D
Sbjct: 796 LGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRD 831


>At3g06435.1 68416.m00743 Expressed protein
          Length = 200

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
 Frame = +2

Query: 5   TKLP--VQLFGLKQKMTILCW--LALLSTLTAVNAVNILAVFPTPAYSHHIVYKVYI 163
           TK+P  V++FG+   +T   W  +A L    AV AVN L +    +Y    V  +Y+
Sbjct: 15  TKIPQRVEVFGVNDPVTRFGWTIMAFLCVFGAVGAVNALEIQMDVSYLVMFVVAIYV 71


>At1g11430.1 68414.m01313 plastid developmental protein DAG,
           putative similar to DAG protein, chloroplast precursor
           [Garden snapdragon] SWISS-PROT:Q38732
          Length = 232

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +2

Query: 104 ILAVFPT-PAYSHHIVYKVYIEALAEKCHNVTVVKPKLFAYSTKTYCGNITEVNSDMSVK 280
           I+  FP  PA S   +   Y+  LA    ++   K  ++A+ST TY G    ++ + S K
Sbjct: 92  IVMEFPKDPAPSRDQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTIDEETSEK 151


>At2g24450.1 68415.m02922 fasciclin-like arabinogalactan family
           protein similar to fasciclin-like
           arabinogalactan-protein 1 [Arabidopsis thaliana]
           gi|13377776|gb|AAK20857
          Length = 280

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
 Frame = +2

Query: 29  GLKQKMTILCWLALLSTLTAVNAVNILAV---FPTPAYSHHIVYKVYIEALAEKCHNVTV 199
           GLK   ++LC   LL+  + V+AVNI  V   +P  +    ++ K  +  +  K   +TV
Sbjct: 2   GLKVSSSLLCLTILLAVSSIVSAVNITRVLEKYPEFSTMTELLAKTELTPIINKRQTITV 61

Query: 200 V 202
           +
Sbjct: 62  L 62


>At4g09500.2 68417.m01562 glycosyltransferase family protein
           contains Pfam profile: PF00201 UDP-glucoronosyl and
           UDP-glucosyl transferase
          Length = 442

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +2

Query: 113 VFPTPAYSHHIVYKVYIEALAEKCHNVTVVKPK 211
           +FP  A+ H I +      LAEK H VT + PK
Sbjct: 9   MFPWFAFGHMIPFLHLANKLAEKGHRVTFLLPK 41


>At4g09500.1 68417.m01561 glycosyltransferase family protein
           contains Pfam profile: PF00201 UDP-glucoronosyl and
           UDP-glucosyl transferase
          Length = 417

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +2

Query: 113 VFPTPAYSHHIVYKVYIEALAEKCHNVTVVKPK 211
           +FP  A+ H I +      LAEK H VT + PK
Sbjct: 9   MFPWFAFGHMIPFLHLANKLAEKGHRVTFLLPK 41


>At2g23410.1 68415.m02795 dehydrodolichyl diphosphate synthase /
           DEDOL-PP synthase (DPS) identical to dehydrodolichyl
           diphosphate synthase [Arabidopsis thaliana] GI:7960765
          Length = 303

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 19/70 (27%), Positives = 35/70 (50%)
 Frame = +2

Query: 122 TPAYSHHIVYKVYIEALAEKCHNVTVVKPKLFAYSTKTYCGNITEVNSDMSVKQYKKLVT 301
           T +  H    K  I+ +AE C  + V     FA+ST+ +  +  E+++ MS+ Q+ +  +
Sbjct: 91  TTSQGHEAGAKRLID-IAELCFELGVHTVSAFAFSTENWGRDKIEIDNLMSLIQHYRNKS 149

Query: 302 NSAMFRKRGV 331
           N   F +  V
Sbjct: 150 NIKFFHRSEV 159


>At4g02020.1 68417.m00272 zeste-like protein 1 (EZA1) identical to
           enhancer of zeste-like protein 1(EZA1) (GI:4185507)
           [Arabidopsis thaliana]; similar to polycomb group
           [Arabidopsis thaliana] GI:1903019 (curly leaf); contains
           Pfam profile PF00856: SET domain
          Length = 856

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = -2

Query: 620 RNCCAKC*DGERGAAPRR 567
           RNC   C DG  G APRR
Sbjct: 674 RNCWVSCGDGSLGEAPRR 691


>At2g22930.1 68415.m02723 glycosyltransferase family protein
           contains Pfam profile: PF00201 UDP-glucoronosyl and
           UDP-glucosyl transferase
          Length = 442

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 113 VFPTPAYSHHIVYKVYIEALAEKCHNVTVVKPK 211
           +FP  A+ H I +      LAEK H +T + PK
Sbjct: 9   MFPWFAFGHMIPFLHLANKLAEKGHQITFLLPK 41


>At1g72520.1 68414.m08386 lipoxygenase, putative similar to
           lipoxygenase gi:1495804 [Solanum tuberosum], gi:1654140
           [Lycopersicon esculentum], GB:CAB56692 [Arabidopsis
           thaliana]
          Length = 926

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 14/26 (53%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = +3

Query: 168 PLPKNVTTLRSSSPNCLRI-RPKLIA 242
           PLPK VTTL+ SS   LR   PK+++
Sbjct: 393 PLPKIVTTLQKSSEGLLRYDTPKIVS 418


>At3g62550.1 68416.m07027 universal stress protein (USP) family
           protein similar to ER6 protein [Lycopersicon esculentum]
           GI:5669654; contains Pfam profile PF00582: universal
           stress protein family
          Length = 162

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +2

Query: 200 VKPKLFAYSTKTYCGNITEVNSDMSVKQYKKLVTNSAMFRKRGVVSDTDT 349
           VKP L  YS+    G I   +   ++K+Y+  +  S M R R V  D ++
Sbjct: 44  VKPPLPVYSSLDAAGFIVTGDPVAALKKYEYELVESVMARSRTVYQDYES 93


>At3g29630.1 68416.m03726 glycosyltransferase family protein
           contains Pfam profile: PF00201 UDP-glucoronosyl and
           UDP-glucosyl transferase
          Length = 448

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 113 VFPTPAYSHHIVYKVYIEALAEKCHNVTVVKPK 211
           ++P   + H I Y      LAEK H VT + PK
Sbjct: 9   LYPWFGFGHMIPYLHLANKLAEKGHRVTFLAPK 41


>At2g40040.1 68415.m04920 defective chloroplasts and leaves
           protein-related / DCL protein-related similar to DCL
           protein, chloroplast precursor (Defective chloroplasts
           and leaves protein) (Swiss-Prot:Q42463) [Lycopersicon
           esculentum]
          Length = 839

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = -2

Query: 557 QSFPPNRSQARFGLRAQDRTGGQTPTHNRQTLPRQLNQTS 438
           QS PPN+S    G   Q +T  Q+P+  R   P Q    S
Sbjct: 733 QSQPPNQSIGNGGDDFQTQTQSQSPSQTRAQSPSQAQAQS 772


>At2g17210.1 68415.m01987 pentatricopeptide (PPR) repeat-containing
           protein contains Pfam profile PF01535: PPR repeat
          Length = 715

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 18/80 (22%), Positives = 30/80 (37%)
 Frame = +2

Query: 245 NITEVNSDMSVKQYKKLVTNSAMFRKRGVVSDTDTVTAANYLGLIEMFKDQFDNINVRNL 424
           N   V++D+   ++   +          +   T  V A    G IEM +  FD I  +N+
Sbjct: 434 NACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNI 493

Query: 425 IANNQTFDLVVVEAFADYAL 484
           I+         +    D AL
Sbjct: 494 ISWTVIISAYAINGLPDKAL 513


>At1g30710.1 68414.m03754 FAD-binding domain-containing protein
           similar to SP|P30986 reticuline oxidase precursor
           (Berberine-bridge-forming enzyme) (BBE)
           (Tetrahydroprotoberberine synthase) [Eschscholzia
           californica]; contains PF01565 FAD binding domain
          Length = 531

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = -1

Query: 705 LSNALDMLAKILNSLYKRISVIKFAFVSSKLLRQMLGW*TGCRATAPTVSKFSAKP 538
           L N+ ++L +I+N+ +  + +IK   +  K +  +L W      TAPT S  +  P
Sbjct: 312 LGNSSNLL-EIMNAKFPELGLIKRECIEMKWIESVLFWLGIPPGTAPTTSMLNRIP 366


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,162,058
Number of Sequences: 28952
Number of extensions: 345288
Number of successful extensions: 862
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 861
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1565336320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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