Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0016
(603 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g72270.1 68414.m08355 expressed protein 30 1.4
At1g15890.1 68414.m01906 disease resistance protein (CC-NBS-LRR ... 30 1.4
At1g77290.1 68414.m09001 tetrachloro-p-hydroquinone reductive de... 29 2.4
At2g25730.1 68415.m03084 expressed protein 29 3.1
At5g06600.2 68418.m00746 ubiquitin-specific protease 12 (UBP12) ... 28 5.5
At5g06600.1 68418.m00745 ubiquitin-specific protease 12 (UBP12) ... 28 5.5
At3g16470.1 68416.m02101 jacalin lectin family protein contains ... 28 5.5
At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase fa... 28 5.5
At4g35360.1 68417.m05024 pantothenate kinase family protein cont... 27 7.2
At3g32280.1 68416.m04116 hypothetical protein 27 7.2
At3g22750.1 68416.m02869 protein kinase, putative similar to pro... 27 7.2
At3g01880.1 68416.m00133 hypothetical protein 27 7.2
At5g23070.1 68418.m02697 thymidine kinase, putative similar to t... 27 9.6
>At1g72270.1 68414.m08355 expressed protein
Length = 2777
Score = 29.9 bits (64), Expect = 1.4
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Frame = +2
Query: 206 DPIALKNVSVTVLGLVDITLLEGQAKGVKTCKFSSI-KIDLEKEIGGYEFTCDIDIEGKY 382
DP+ + VSV +L +V I +E + G+ F+S+ DL GYE T I ++
Sbjct: 2202 DPVFILRVSVQLLSMVYIEPVEFASLGLLAVAFASMSSADLGIRKLGYE-TLGIFVD--- 2257
Query: 383 KVFSESPLIKNLLGGTTVHGEGNGKVQLEKLQISMKFPVYAQKRDDGEIYMK 538
V PL + G +TV+ + ++L + V + +D +IY++
Sbjct: 2258 -VLEGIPLFHDFFGSSTVN------FRSQRLWVLRLVFVGLESEEDAQIYIR 2302
>At1g15890.1 68414.m01906 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 851
Score = 29.9 bits (64), Expect = 1.4
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Frame = +2
Query: 20 IATKMA-LMFIFLFGLIVFGDAAFVDTLGKCSLKDEECTKSLINNALNEISSTGIPELDI 196
IAT + L + LF V D + ++ L L+ + + I +AL S G+ L +
Sbjct: 625 IATSLPNLQVLKLFSSRVCIDGSLMEEL--LLLEHLKVLTATIKDALILESIQGVDRL-V 681
Query: 197 PPVDPIALKNVSVTVLGLVDITLLEGQAKGVKTCKFSSIKIDLEKEIGGYEFTC 358
+ + L+N+S V+ L + L Q + K S IKID E++ G E C
Sbjct: 682 SSIQALCLRNMSAPVIILNTVALGGLQHLEIVGSKISEIKIDWERK-GRGELKC 734
>At1g77290.1 68414.m09001 tetrachloro-p-hydroquinone reductive
dehalogenase-related contains similarity to
tetrachloro-p-hydroquinone reductive dehalogenase
GI:148689 from [Flavobacterium sp.]
Length = 266
Score = 29.1 bits (62), Expect = 2.4
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +1
Query: 388 VFRKPSYKELVGRHDRPWRR 447
V R+PSYK+++GR+ WR+
Sbjct: 227 VRRRPSYKKVIGRYFNGWRK 246
>At2g25730.1 68415.m03084 expressed protein
Length = 2464
Score = 28.7 bits (61), Expect = 3.1
Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +2
Query: 92 DTLGKCSLKDEECTKSLINNALNEISSTGIPELDIPPVDPIALKNVSVTVLGLVDITLLE 271
++ G C +++ + + +NE + G PELD V + +NV + L + L E
Sbjct: 194 ESYGTCLVEEVQGEEQ--RKEMNEATCIGSPELDNINVFALIQRNVQLAQLDAMKTKLDE 251
Query: 272 GQAKG-VKTCKFSSIKIDLEKE 334
G +G ++ + +EKE
Sbjct: 252 GDERGAADRIRYLHLDYGVEKE 273
>At5g06600.2 68418.m00746 ubiquitin-specific protease 12 (UBP12)
almost identical to ubiquitin-specific protease 12
GI:11993471 [Arabidopsis thaliana], one amino acid
difference
Length = 1115
Score = 27.9 bits (59), Expect = 5.5
Identities = 30/136 (22%), Positives = 52/136 (38%), Gaps = 3/136 (2%)
Frame = +2
Query: 110 SLKDEECTKSLINNALNEISSTGIPELDIPPVDPIALKNVSVTVLGLVDITLLEGQAKGV 289
S+ +E TKS + + + EL+ + + K V G + L EG
Sbjct: 258 SVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQ-QLFEGHHMNY 316
Query: 290 KTCKFSSIKIDLEKEIGGYEFTCDIDIEG---KYKVFSESPLIKNLLGGTTVHGEGNGKV 460
C I +D + + +D++G Y F + ++ L G H EG+G
Sbjct: 317 IEC----INVDFKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLEGDNKYHAEGHGLQ 372
Query: 461 QLEKLQISMKFPVYAQ 508
+K + + FP Q
Sbjct: 373 DAKKGVLFIDFPPVLQ 388
>At5g06600.1 68418.m00745 ubiquitin-specific protease 12 (UBP12)
almost identical to ubiquitin-specific protease 12
GI:11993471 [Arabidopsis thaliana], one amino acid
difference
Length = 1116
Score = 27.9 bits (59), Expect = 5.5
Identities = 30/136 (22%), Positives = 52/136 (38%), Gaps = 3/136 (2%)
Frame = +2
Query: 110 SLKDEECTKSLINNALNEISSTGIPELDIPPVDPIALKNVSVTVLGLVDITLLEGQAKGV 289
S+ +E TKS + + + EL+ + + K V G + L EG
Sbjct: 259 SVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQ-QLFEGHHMNY 317
Query: 290 KTCKFSSIKIDLEKEIGGYEFTCDIDIEG---KYKVFSESPLIKNLLGGTTVHGEGNGKV 460
C I +D + + +D++G Y F + ++ L G H EG+G
Sbjct: 318 IEC----INVDFKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLEGDNKYHAEGHGLQ 373
Query: 461 QLEKLQISMKFPVYAQ 508
+K + + FP Q
Sbjct: 374 DAKKGVLFIDFPPVLQ 389
>At3g16470.1 68416.m02101 jacalin lectin family protein contains
Pfam profile: PF01419 jacalin-like lectin domain;
similar to myrosinase-binding protein homolog
[Arabidopsis thaliana] GI:2997767
Length = 451
Score = 27.9 bits (59), Expect = 5.5
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = +2
Query: 374 GKYKVFSESPLIKNLLGGTT---VHGEGNGKVQLEKLQISMKFPVYAQKRDDGEIYMKCD 544
G Y + S +PL + GG T G G V + VY + D G +Y+K D
Sbjct: 138 GVYIIPSTTPLTPPVSGGLTKLEAQGGRGGDVWDDGGAYDNVKKVYVGQGDSGVVYVKFD 197
Query: 545 YSK 553
Y K
Sbjct: 198 YEK 200
>At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase
family protein similar to phosphatidylinositol 4-kinase
type-II beta [Homo sapiens] GI:20159767; contains Pfam
profile PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 630
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = +2
Query: 425 GTTVHGEGNGKVQLEKLQISMKFPVYAQKRDDGEIYMKCDYSKIKYDYQIL 577
G + N KLQ+++ FP+ G++ +K D + ++ D +L
Sbjct: 54 GLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLTAVRSDSPLL 104
>At4g35360.1 68417.m05024 pantothenate kinase family protein
contains Pfam domain, PF01937: Protein of unknown
function; similar to SP|Q9NVE7 Pantothenate kinase 4 (EC
2.7.1.33) (Pantothenic acid kinase 4) (hPanK4) {Homo
sapiens}
Length = 367
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = +2
Query: 191 DIPPVDPIALKNVSVTVLGLVDITLLEGQAKGVKTCKFSSIKID 322
D+P +D + + D+ +LEG +G++T ++ K D
Sbjct: 292 DLPVIDLARVSQEVAYLSSDADLVILEGMGRGIETNLYAQFKCD 335
>At3g32280.1 68416.m04116 hypothetical protein
Length = 474
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +2
Query: 407 IKNLLGGTTVHGEGNGKVQLEKLQISMKFPVYAQKRDDGEIYMKCDYSKIKYDY 568
+K+++ G + G +GK L + + V Q R D EI M D K +D+
Sbjct: 172 LKHVIIGGSSGGSNSGKGLANDLYLDVNELVEVQVRSDKEINMMKDKGKTIFDF 225
>At3g22750.1 68416.m02869 protein kinase, putative similar to
protein kinase ATMRK1 [Arabidopsis thaliana]
gi|2351097|dbj|BAA22079
Length = 378
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +3
Query: 384 KCFPKAL--L*RTCWEARPSMAKEMEK 458
+C P AL + + CWEA P EME+
Sbjct: 318 RCCPTALATIMKRCWEANPEKRPEMEE 344
>At3g01880.1 68416.m00133 hypothetical protein
Length = 592
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -2
Query: 254 PPVQEQSRKHFSKQWGPRVEYLIQVY 177
P V E ++ ++WGPRV Y I ++
Sbjct: 518 PGVVEPPWLNYFRKWGPRVHYRIDIF 543
>At5g23070.1 68418.m02697 thymidine kinase, putative similar to
thymidine kinase [Oryza sativa] SWISS-PROT:O81263
Length = 282
Score = 27.1 bits (57), Expect = 9.6
Identities = 19/73 (26%), Positives = 34/73 (46%)
Frame = -1
Query: 402 GLSENTLYFPSISISQVNSYPPISFSKSIFIELNLQVFTPFA*PSSNVMSTSPRTVTETF 223
G+S TL PS++ ++ + P FS ++ ++ TP P S + ST T
Sbjct: 3 GVSMRTLISPSLAPFSLHLHKPSLFSTALRFSFSINNITPTNSPPSTI-STRKLQTKATR 61
Query: 222 FKAMGSTGGISNS 184
+ S+ +S+S
Sbjct: 62 VTSSSSSQPLSSS 74
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,649,116
Number of Sequences: 28952
Number of extensions: 259475
Number of successful extensions: 767
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1197101088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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