Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060091.seq
(626 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 111 3e-25
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 72 3e-13
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 65 3e-11
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 65 3e-11
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 64 1e-10
At5g25230.1 68418.m02991 elongation factor Tu family protein tra... 62 2e-10
At5g13650.2 68418.m01585 elongation factor family protein contai... 58 5e-09
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 58 6e-09
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 57 1e-08
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 57 1e-08
At5g13650.1 68418.m01584 elongation factor family protein contai... 56 2e-08
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 53 1e-07
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 49 2e-06
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 33 0.12
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 33 0.21
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 32 0.27
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 32 0.27
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 32 0.27
At3g06620.1 68416.m00769 protein kinase family protein contains ... 32 0.27
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 32 0.27
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 32 0.27
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 32 0.27
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 29 1.9
At4g16155.1 68417.m02451 dihydrolipoamide dehydrogenase 2, plast... 29 3.3
At3g20280.2 68416.m02570 PHD finger family protein contains Pfam... 29 3.3
At3g20280.1 68416.m02569 PHD finger family protein contains Pfam... 29 3.3
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 29 3.3
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 29 3.3
At1g33910.1 68414.m04203 avirulence-responsive family protein / ... 29 3.3
At5g23160.1 68418.m02708 expressed protein ; expression supporte... 28 4.4
At5g17810.1 68418.m02088 homeobox-leucine zipper transcription f... 28 4.4
At3g16950.1 68416.m02166 dihydrolipoamide dehydrogenase 1, plast... 28 5.8
At1g12080.1 68414.m01396 expressed protein 28 5.8
At3g03660.1 68416.m00369 homeobox-leucine zipper transcription f... 27 7.7
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 27 7.7
At1g12080.2 68414.m01397 expressed protein 27 7.7
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 111 bits (268), Expect = 3e-25
Identities = 56/85 (65%), Positives = 68/85 (80%)
Frame = +2
Query: 254 LKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGA 433
+KST IS+++E+ ++ L T R+ +E +LINLIDSPGHVDFSSEVTAALR+TDGA
Sbjct: 70 IKSTGISLYYEMTDESLKSFTGA--RDGNE--YLINLIDSPGHVDFSSEVTAALRITDGA 125
Query: 434 LXVVDCVSGVCVQTETVLRQAXAER 508
L VVDC+ GVCVQTETVLRQA ER
Sbjct: 126 LVVVDCIEGVCVQTETVLRQALGER 150
Score = 102 bits (244), Expect = 2e-22
Identities = 50/70 (71%), Positives = 56/70 (80%)
Frame = +3
Query: 48 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 227
MV FT DE+R +MD K NIRNMSVIAHVDHGKSTLTDSLV+ AGIIA AG+ R TDTR
Sbjct: 1 MVKFTADELRRIMDYKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 228 KDEQDRCITL 257
DE +R IT+
Sbjct: 61 ADEAERGITI 70
Score = 41.5 bits (93), Expect = 4e-04
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 451 CVWXVCTN*NSTA-SGXCRALKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVII 624
C+ VC + ++P+L +NKMDR YQTF R++EN NVI+
Sbjct: 131 CIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFSRVIENANVIM 189
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 72.1 bits (169), Expect = 3e-13
Identities = 33/55 (60%), Positives = 42/55 (76%)
Frame = +2
Query: 344 KGFLINLIDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQTETVLRQAXAER 508
K + +NLIDSPGH+DF SEV+ A R++DGAL +VD V GV +QT VLRQA E+
Sbjct: 72 KDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLRQAWIEK 126
Score = 55.2 bits (127), Expect = 3e-08
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Frame = +3
Query: 96 RNIRNMSVIAHVDHGKSTLTDSLV--SKAGIIAGARAGETRFTDTRKDEQDRCITL 257
R +RN+ ++AHVDHGK+TL D L+ S G++ AG+ RF D +EQ R IT+
Sbjct: 7 RKVRNICILAHVDHGKTTLADHLIASSGGGVLHPRLAGKLRFMDYLDEEQRRAITM 62
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 65.3 bits (152), Expect = 3e-11
Identities = 27/55 (49%), Positives = 39/55 (70%)
Frame = +2
Query: 332 EKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQTETVLRQA 496
+ K +L N++D+PGHV+FS E+TA+LR+ DGA+ +VD GV V TE +R A
Sbjct: 203 DSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEGVMVNTERAIRHA 257
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Frame = +3
Query: 78 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARA---GETRFTDTRKDEQDRC 248
G+M +RN++++ H+ HGK+ D LV + ++ A ++TDTR DEQ+R
Sbjct: 130 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQERN 189
Query: 249 ITLNLRP 269
I++ P
Sbjct: 190 ISIKAVP 196
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 65.3 bits (152), Expect = 3e-11
Identities = 27/55 (49%), Positives = 39/55 (70%)
Frame = +2
Query: 332 EKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQTETVLRQA 496
+ K +L N++D+PGHV+FS E+TA+LR+ DGA+ +VD GV V TE +R A
Sbjct: 203 DSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEGVMVNTERAIRHA 257
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Frame = +3
Query: 78 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARA---GETRFTDTRKDEQDRC 248
G+M +RN++++ H+ HGK+ D LV + ++ A ++TDTR DEQ+R
Sbjct: 130 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQERN 189
Query: 249 ITLNLRP 269
I++ P
Sbjct: 190 ISIKAVP 196
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 63.7 bits (148), Expect = 1e-10
Identities = 37/80 (46%), Positives = 51/80 (63%)
Frame = +2
Query: 257 KSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 436
+ TA + E E++ + IT+ +K IN+ID+PGHVDF+ EV ALRV DGA+
Sbjct: 131 EGTATMDWMEQEQERGITITSAATTTFWDK-HRINIIDTPGHVDFTLEVERALRVLDGAI 189
Query: 437 XVVDCVSGVCVQTETVLRQA 496
+ D V+GV Q+ETV RQA
Sbjct: 190 CLFDSVAGVEPQSETVWRQA 209
Score = 33.5 bits (73), Expect = 0.12
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Frame = +3
Query: 96 RNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGE----TRFTDTRKDEQDRCITL 257
++ RN+ ++AH+D GK+T T+ ++ G + GE T D + EQ+R IT+
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG--RNYKIGEVHEGTATMDWMEQEQERGITI 149
>At5g25230.1 68418.m02991 elongation factor Tu family protein
translation Elongation Factor 2, Schizosaccharomyces
pombe, PIR:T39902
Length = 973
Score = 62.5 bits (145), Expect = 2e-10
Identities = 26/55 (47%), Positives = 39/55 (70%)
Frame = +2
Query: 332 EKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQTETVLRQA 496
+ K +L N++D+PG+V+FS E+TA+LR+ DGA+ +VD GV V TE +R A
Sbjct: 189 DSRSKSYLCNIMDTPGNVNFSDEMTASLRLADGAVFIVDAAQGVMVNTERAIRHA 243
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Frame = +3
Query: 78 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARA---GETRFTDTRKDEQDRC 248
G+M +RN++++ H+ HGK+ D LV + ++ A R+TDTR DEQ+R
Sbjct: 116 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHRMSTFNAENDKHMRYTDTRVDEQERN 175
Query: 249 ITLNLRP 269
I++ P
Sbjct: 176 ISIKAVP 182
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 58.0 bits (134), Expect = 5e-09
Identities = 25/73 (34%), Positives = 47/73 (64%)
Frame = +3
Query: 39 PSKMVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFT 218
PS +V+ + +D++ N+RN++++AHVDHGK+TL DS++ +A + + + R
Sbjct: 62 PSTAEPASVEVKKKQLDRRDNVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQERIM 121
Query: 219 DTRKDEQDRCITL 257
D+ E++R IT+
Sbjct: 122 DSNDLERERGITI 134
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/51 (49%), Positives = 31/51 (60%)
Frame = +2
Query: 344 KGFLINLIDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQTETVLRQA 496
K +N+ID+PGH DF EV L + DG L VVD V G QT VL++A
Sbjct: 144 KNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMPQTRFVLKKA 194
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 57.6 bits (133), Expect = 6e-09
Identities = 26/48 (54%), Positives = 33/48 (68%)
Frame = +2
Query: 332 EKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQT 475
++ G+L+NLID+PGHVDFS EV+ +L GAL VVD GV QT
Sbjct: 129 DQEASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQGVQAQT 176
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/52 (46%), Positives = 34/52 (65%)
Frame = +3
Query: 102 IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITL 257
IRN S+IAH+DHGKSTL D L+ G I G+ ++ D K +++R IT+
Sbjct: 66 IRNFSIIAHIDHGKSTLADRLMELTGTIKKGH-GQPQYLD--KLQRERGITV 114
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 56.8 bits (131), Expect = 1e-08
Identities = 28/50 (56%), Positives = 36/50 (72%)
Frame = +2
Query: 344 KGFLINLIDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQTETVLRQ 493
K + +N+ID+PGHVDF+ EV ALRV DGA+ V+ V GV Q+ TV RQ
Sbjct: 131 KDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQ 180
Score = 33.1 bits (72), Expect = 0.16
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Frame = +3
Query: 84 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII-----AGARAGETRFTDTRKDEQDRC 248
MDK +RN+ + AH+D GK+TLT+ ++ G I R G D+ E+++
Sbjct: 62 MDK---LRNIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKG 118
Query: 249 ITLNLRPSLCS 281
IT+ + C+
Sbjct: 119 ITIQSAATYCT 129
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 56.8 bits (131), Expect = 1e-08
Identities = 28/50 (56%), Positives = 36/50 (72%)
Frame = +2
Query: 344 KGFLINLIDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQTETVLRQ 493
K + +N+ID+PGHVDF+ EV ALRV DGA+ V+ V GV Q+ TV RQ
Sbjct: 131 KDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQ 180
Score = 33.1 bits (72), Expect = 0.16
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Frame = +3
Query: 84 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII-----AGARAGETRFTDTRKDEQDRC 248
MDK +RN+ + AH+D GK+TLT+ ++ G I R G D+ E+++
Sbjct: 62 MDK---LRNIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKG 118
Query: 249 ITLNLRPSLCS 281
IT+ + C+
Sbjct: 119 ITIQSAATYCT 129
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 56.0 bits (129), Expect = 2e-08
Identities = 22/58 (37%), Positives = 41/58 (70%)
Frame = +3
Query: 84 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITL 257
+D++ N+RN++++AHVDHGK+TL DS++ +A + + + R D+ E++R IT+
Sbjct: 76 LDRRDNVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQERIMDSNDLERERGITI 133
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/51 (49%), Positives = 31/51 (60%)
Frame = +2
Query: 344 KGFLINLIDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQTETVLRQA 496
K +N+ID+PGH DF EV L + DG L VVD V G QT VL++A
Sbjct: 143 KNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMPQTRFVLKKA 193
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/56 (46%), Positives = 36/56 (64%)
Frame = +3
Query: 99 NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITLNLR 266
NIRN S+IAH+DHGKSTL D L+ G + R + +F D E++R IT+ L+
Sbjct: 85 NIRNFSIIAHIDHGKSTLADKLLQVTGTVQN-RDMKEQFLDNMDLERERGITIKLQ 139
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/42 (59%), Positives = 30/42 (71%)
Frame = +2
Query: 350 FLINLIDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQT 475
F +NLID+PGHVDFS EV+ +L +GAL VVD GV QT
Sbjct: 152 FCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQT 193
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 49.2 bits (112), Expect = 2e-06
Identities = 26/69 (37%), Positives = 38/69 (55%)
Frame = +3
Query: 54 NFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKD 233
+FTV RG ++K+ N+ I HVDHGK+TLT +L I + A + D +
Sbjct: 63 SFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDEIDAAPE 122
Query: 234 EQDRCITLN 260
E+ R IT+N
Sbjct: 123 ERARGITIN 131
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +2
Query: 365 IDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQTE 478
+D PGH D+ + DGA+ VV G QT+
Sbjct: 147 VDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTK 184
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 33.5 bits (73), Expect = 0.12
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +3
Query: 108 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITL 257
N+ I HVDHGK+TLT ++ A+A D +E+ R IT+
Sbjct: 69 NVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITI 118
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = +2
Query: 365 IDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQT-ETVLRQAXAERSSLFC 523
+D PGH D+ + DG + VV G QT E +L SL C
Sbjct: 135 VDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMPQTKEHILLARQVGVPSLVC 188
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 32.7 bits (71), Expect = 0.21
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 365 IDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQTETVLRQAXA 502
+D+PGH F + RVTD A+ VV G+ QT + A A
Sbjct: 557 LDTPGHEAFGAMRARGARVTDIAIIVVAADDGIRPQTNEAIAHAKA 602
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 111 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR 212
++++ HVDHGK+TL D + K+ + A G T+
Sbjct: 504 ITIMGHVDHGKTTLLD-YIRKSKVAASEAGGITQ 536
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 32.3 bits (70), Expect = 0.27
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +3
Query: 84 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 179
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLG 32
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +2
Query: 350 FLINLIDSPGHVDFSSEVTAALRVTDGALXVVDCVSG 460
+ +ID+PGH DF + D A+ ++D +G
Sbjct: 85 YYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 121
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 32.3 bits (70), Expect = 0.27
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 362 LIDSPGHVDFSSEVTAALRVTDGALXVVDCVSG 460
L+DSPGH DF + A D A+ V+D G
Sbjct: 321 LLDSPGHKDFVPNMIAGATQADAAILVIDASVG 353
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 108 NMSVIAHVDHGKSTLTDSLVSKAGIIA 188
N++++ HVD GKSTL+ L+ G I+
Sbjct: 241 NLAIVGHVDSGKSTLSGRLLHLLGRIS 267
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 32.3 bits (70), Expect = 0.27
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +2
Query: 341 EKGFLINLIDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQTETVLRQA 496
+ G I +D+PGH FS VTD + VV GV QT + A
Sbjct: 265 DSGTSITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDGVMPQTLEAIAHA 316
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +3
Query: 111 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAG 203
++V+ HVDHGK++L D+L + + +A AG
Sbjct: 222 VTVMGHVDHGKTSLLDALRNTS--VAAREAG 250
>At3g06620.1 68416.m00769 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 773
Score = 32.3 bits (70), Expect = 0.27
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = -3
Query: 561 LELKKSTVHFVHEQNRLERSAXA*RSTVSVCTHTPDTQSTTXRAPSVTRSAAVTSEEKST 382
LEL++S H E +RL+ S + + SV H P ++ APS +S A + S
Sbjct: 14 LELEESQEHLKQEMSRLKVSTELRQRSHSVSPHRPARRNIGEGAPSWRKSGAASFRNASP 73
Query: 381 CPGES 367
ES
Sbjct: 74 LRKES 78
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 32.3 bits (70), Expect = 0.27
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +3
Query: 84 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 179
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLG 32
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +2
Query: 350 FLINLIDSPGHVDFSSEVTAALRVTDGALXVVDCVSG 460
+ +ID+PGH DF + D A+ ++D +G
Sbjct: 85 YYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 121
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 32.3 bits (70), Expect = 0.27
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +3
Query: 84 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 179
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLG 32
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +2
Query: 350 FLINLIDSPGHVDFSSEVTAALRVTDGALXVVDCVSG 460
+ +ID+PGH DF + D A+ ++D +G
Sbjct: 85 YYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 121
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 32.3 bits (70), Expect = 0.27
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +3
Query: 84 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 179
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLG 32
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +2
Query: 350 FLINLIDSPGHVDFSSEVTAALRVTDGALXVVDCVSG 460
+ +ID+PGH DF + D A+ ++D +G
Sbjct: 85 YYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 121
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 356 INLIDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQT 475
I +ID+PGH F++ + + D A+ VVD + G+ QT
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVVDIMRGLEPQT 597
>At4g16155.1 68417.m02451 dihydrolipoamide dehydrogenase 2,
plastidic / lipoamide dehydrogenase 2 (PTLPD2) identical
to plastidic lipoamide dehydrogenase from Arabidopsis
thaliana [gi:7159284]
Length = 567
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 230 GRTRPLHHLKSTAISMFFELEEKDLVFITNPDQREKSEK-GFLINL 364
GR L+HL A F E +V +T P REK+EK GF +++
Sbjct: 424 GRDHVLNHLSIPAAC--FTHPEISMVGLTEPQAREKAEKEGFKVSI 467
>At3g20280.2 68416.m02570 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 482
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 516 RLERSAXA*RSTVSVCTHTPDTQSTTXRAPSVTRSAAVTSEEKS 385
+++ A T S T PD ST APSVT+ + + EK+
Sbjct: 372 KVDSEACQNHPTASPATVVPDQDSTITAAPSVTQEDSAFNTEKT 415
>At3g20280.1 68416.m02569 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 743
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 516 RLERSAXA*RSTVSVCTHTPDTQSTTXRAPSVTRSAAVTSEEKS 385
+++ A T S T PD ST APSVT+ + + EK+
Sbjct: 633 KVDSEACQNHPTASPATVVPDQDSTITAAPSVTQEDSAFNTEKT 676
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 362 LIDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQT 475
+ID+PGH F++ + + D A+ VVD G+ QT
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVVDITHGLQPQT 150
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +2
Query: 362 LIDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQT 475
+ID+PGH F++ + + D A+ VVD + G+ QT
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVVDIMHGLEPQT 809
>At1g33910.1 68414.m04203 avirulence-responsive family protein /
avirulence induced gene (AIG1) family protein similar to
SP|P54120 AIG1 protein {Arabidopsis thaliana}; contains
Pfam profile PF04548: AIG1 family
Length = 301
Score = 28.7 bits (61), Expect = 3.3
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
Frame = +2
Query: 329 REKSEKGFLINLIDSPGHVDFS-------SEVTAALRVTDGALXVVDCVSGV 463
+ K+ G +IN+ID+PG D S E+ L +TDG L V V V
Sbjct: 50 KAKTLDGQIINVIDTPGLFDLSVSTDYMNKEIINCLTLTDGGLHAVVLVLSV 101
>At5g23160.1 68418.m02708 expressed protein ; expression supported
by MPSS
Length = 271
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 151 SRTRWFPRPVSLLAREPERPVSLTRVRTNK 240
+RTRWF RP ++E P S+ + K
Sbjct: 49 TRTRWFSRPTKFRSKEEITPTSIYKSEKQK 78
>At5g17810.1 68418.m02088 homeobox-leucine zipper transcription
factor family protein similar to to PRESSED FLOWER
(GP:17907768) {Arabidopsis thaliana};
Length = 268
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 121 SPTSITASQPSRTRWFPRPVSLLARE 198
SP+S T+++P R RW P+P +L E
Sbjct: 9 SPSS-TSTEPVRARWSPKPEQILILE 33
>At3g16950.1 68416.m02166 dihydrolipoamide dehydrogenase 1,
plastidic / lipoamide dehydrogenase 1 (PTLPD1) identical
to plastidic lipoamide dehydrogenase from Arabidopsis
thaliana [gi:7159282]
Length = 570
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 230 GRTRPLHHLKSTAISMFFELEEKDLVFITNPDQREKSEK-GFLINLI 367
GR L+HL A F E +V +T P +EK EK GF ++++
Sbjct: 427 GRDHVLNHLSIPAAC--FTHPEISMVGLTEPQAKEKGEKEGFKVSVV 471
>At1g12080.1 68414.m01396 expressed protein
Length = 104
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/58 (25%), Positives = 24/58 (41%)
Frame = -3
Query: 555 LKKSTVHFVHEQNRLERSAXA*RSTVSVCTHTPDTQSTTXRAPSVTRSAAVTSEEKST 382
++++ V + E+ V T TP + +A VT + AV EEK T
Sbjct: 24 VEETVVETEKKDEETEKKTEEKDEKTEVITETPVVEEEEKKAEEVTETPAVVEEEKKT 81
>At3g03660.1 68416.m00369 homeobox-leucine zipper transcription
factor family protein similar to to PRESSED FLOWER
(GP:17907768) {Arabidopsis thaliana}
Length = 199
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 121 SPTSITASQPSRTRWFPRPVSLLARE 198
S + T+++P R+RW P+P +L E
Sbjct: 20 SASGSTSAEPVRSRWSPKPEQILILE 45
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 362 LIDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQT 475
+ID+PGH F++ + + D A+ VVD G+ QT
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVVDIKHGLEPQT 742
>At1g12080.2 68414.m01397 expressed protein
Length = 138
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -3
Query: 474 VCTHTPDTQSTTXRAPSVTRSAAVTSEEKST 382
V T TP + +A VT + AV EEK T
Sbjct: 85 VITETPVVEEEEKKAEEVTETPAVVEEEKKT 115
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,690,403
Number of Sequences: 28952
Number of extensions: 244656
Number of successful extensions: 779
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1275599520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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