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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021021
         (795 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g33320.1 68415.m04084 C2 domain-containing protein low simila...    33   0.22 
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex...    31   0.88 
At2g11005.1 68415.m01177 glycine-rich protein                          29   3.6  
At4g29780.1 68417.m04241 expressed protein                             29   4.7  
At1g43850.1 68414.m05052 SEUSS transcriptional co-regulator iden...    29   4.7  
At5g10900.1 68418.m01265 calcineurin-like phosphoesterase family...    28   6.2  
At4g08180.3 68417.m01353 oxysterol-binding family protein simila...    28   6.2  
At4g08180.2 68417.m01352 oxysterol-binding family protein simila...    28   6.2  
At4g08180.1 68417.m01351 oxysterol-binding family protein simila...    28   6.2  
At2g35920.1 68415.m04409 helicase domain-containing protein simi...    28   6.2  
At5g07580.1 68418.m00868 ethylene-responsive element-binding fam...    28   8.2  
At5g04290.1 68418.m00422 KOW domain-containing transcription fac...    28   8.2  
At2g47060.2 68415.m05880 serine/threonine protein kinase, putati...    28   8.2  
At2g47060.1 68415.m05879 serine/threonine protein kinase, putati...    28   8.2  
At1g72110.1 68414.m08335 expressed protein                             28   8.2  

>At2g33320.1 68415.m04084 C2 domain-containing protein low
           similarity to splicing coactivator subunit SRm300 [Homo
           sapiens] GI:6649242; contains Pfam profile PF00168: C2
           domain
          Length = 602

 Score = 33.1 bits (72), Expect = 0.22
 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
 Frame = +3

Query: 570 LIRRCRLTTS--IFTDVAESV-KSRKRSKQSTSERYSTESSVDPTTTAAGAKSNYSTATK 740
           ++RR R  TS  + +D+   V +SR  +++  S   S ES   PTTT   + ++ S  TK
Sbjct: 211 MLRRTRSDTSSMVVSDLLSRVERSRVANRKPASALMSAESETVPTTTGHDSVTSDSELTK 270

Query: 741 SITTAV 758
           SI  A+
Sbjct: 271 SIEYAL 276


>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
           extensin family protein similar to extensin-like protein
           [Lycopersicon esculentum] gi|5917664|gb|AAD55979;
           contains leucine-rich repeats, Pfam:PF00560; contains
           proline rich extensin domains, INTERPRO:IPR002965
          Length = 839

 Score = 31.1 bits (67), Expect = 0.88
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = -1

Query: 381 SPALLGHHEASSRAPQAPPVAPRSPILQPLP 289
           SP   G    SS +P  PPV P  PI+ P P
Sbjct: 583 SPPFTGPSPPSSPSPPLPPVIPSPPIVGPTP 613


>At2g11005.1 68415.m01177 glycine-rich protein 
          Length = 170

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 18/85 (21%), Positives = 31/85 (36%)
 Frame = +2

Query: 287 TGSGCRMGERGATGGAWGARDDASWWPSSAGELQHQQQLNEEIGTSTATTSQQMYSYKMS 466
           +G G   G+ G +G   G+RD      SS G         +    ++ ++       +  
Sbjct: 24  SGDGSGSGDGGGSGDGGGSRDSDGSGDSSGGGSGDSGGFGDNSDNNSVSSDSSGGGSRDG 83

Query: 467 GGFTSNGNNTTPSYNIELCLILTQG 541
           GG   NGN       + +  +L  G
Sbjct: 84  GGSGDNGNTDDGVVALVMSFVLVTG 108


>At4g29780.1 68417.m04241 expressed protein
          Length = 540

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +3

Query: 243 KRPRKDKIHKGTG*PQAAVVGWVNGARRGALG-VRATM 353
           KRPRKD    G G     V+G VNG  + A G + AT+
Sbjct: 49  KRPRKDDEGGGGGGGGTEVLGAVNGNNKAAFGDILATL 86


>At1g43850.1 68414.m05052 SEUSS transcriptional co-regulator
           identical to SEUSS transcriptional co-regulator
           [Arabidopsis thaliana] gi|18033922|gb|AAL57277
          Length = 877

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = +2

Query: 338 GARDDASWWPSSA--GELQHQQQLNEEIGTSTATTSQQMYSYKMSGGFTSNGNNTTPSYN 511
           G   +A++ P ++  G    Q Q     GT   ++SQQ ++       TS+ NN  PS N
Sbjct: 666 GRHQNAAYNPPNSPYGGNSVQMQSPSSSGTMVPSSSQQQHNLPTFQSPTSSSNNNNPSQN 725


>At5g10900.1 68418.m01265 calcineurin-like phosphoesterase family
           protein contains Pfam profile: PF00149 calcineurin-like
           phosphoesterase
          Length = 600

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = +2

Query: 356 SWWPSSAGELQHQQQLNEEIGTSTATTSQQMYSYKMSGGFTSNGNNTTPSYNIEL 520
           S+   +   LQHQ      I   ++T  QQM+  +   GF S G +  PS+ + L
Sbjct: 499 SYTVENVPRLQHQI-----ISDGSSTQQQQMWENRTGHGFASMGISNPPSWTVPL 548


>At4g08180.3 68417.m01353 oxysterol-binding family protein similar
           to SP|Q969R2 Oxysterol-binding protein 2 {Homo sapiens};
           contains Pfam profiles PF00169: PH domain, PF01237:
           Oxysterol-binding protein
          Length = 813

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
 Frame = +2

Query: 326 GGAWGARDDASW--WPSSAGELQHQQQLNE 409
           GG W AR+D SW   P   G +   QQ+ E
Sbjct: 784 GGYWEAREDGSWVDCPDIFGHIDSDQQMIE 813


>At4g08180.2 68417.m01352 oxysterol-binding family protein similar
           to SP|Q969R2 Oxysterol-binding protein 2 {Homo sapiens};
           contains Pfam profiles PF00169: PH domain, PF01237:
           Oxysterol-binding protein
          Length = 813

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
 Frame = +2

Query: 326 GGAWGARDDASW--WPSSAGELQHQQQLNE 409
           GG W AR+D SW   P   G +   QQ+ E
Sbjct: 784 GGYWEAREDGSWVDCPDIFGHIDSDQQMIE 813


>At4g08180.1 68417.m01351 oxysterol-binding family protein similar
           to SP|Q969R2 Oxysterol-binding protein 2 {Homo sapiens};
           contains Pfam profiles PF00169: PH domain, PF01237:
           Oxysterol-binding protein
          Length = 814

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
 Frame = +2

Query: 326 GGAWGARDDASW--WPSSAGELQHQQQLNE 409
           GG W AR+D SW   P   G +   QQ+ E
Sbjct: 785 GGYWEAREDGSWVDCPDIFGHIDSDQQMIE 814


>At2g35920.1 68415.m04409 helicase domain-containing protein similar
           to DEIH-box RNA/DNA helicase [Arabidopsis thaliana]
           GI:5881579; contains Pfam profiles PF04408: Helicase
           associated domain (HA2), PF00271: Helicase conserved
           C-terminal domain
          Length = 995

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
 Frame = +2

Query: 293 SGCRMGERGA-TGGAWGARDDASWW-PSSAGELQHQQQLNEEI 415
           SG R G  G   GG  G R +  WW P    E   QQQ   E+
Sbjct: 19  SGRRGGRGGGGRGGGGGGRGEQRWWDPVWRAERLRQQQAEMEV 61


>At5g07580.1 68418.m00868 ethylene-responsive element-binding family
           protein contains similarity to ethylene responsive
           element binding factor 5 (AtERF5) (Swiss-Prot:O80341)
           [Arabidopsis thaliana]; contains Pfam PF00847: AP2
           domain
          Length = 207

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -1

Query: 339 PQAPPVAPRSPILQPLPVVNQFLYV 265
           P  P   P SP+L P   VN+FL V
Sbjct: 46  PHVPKQEPDSPVLDPDSFVNEFLQV 70


>At5g04290.1 68418.m00422 KOW domain-containing transcription factor
            family protein
          Length = 1493

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +2

Query: 275  NWLTTGSGCRMGERGATGGAWGARDDASWW 364
            +W     G   G++G    +WG +DD   W
Sbjct: 934  DWGQPNDGSSWGKKGDGAASWGKKDDGGSW 963


>At2g47060.2 68415.m05880 serine/threonine protein kinase, putative
           similar to Pto kinase interactor 1 (Pti1)[Lycopersicon
           esculentum] gi|3668069|gb|AAC61805
          Length = 397

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -1

Query: 363 HHEASSRAPQAPPVAPRSPILQPL 292
           HH+AS  A + PPV    PI  P+
Sbjct: 37  HHQASETAQKGPPVVKLQPIEVPI 60


>At2g47060.1 68415.m05879 serine/threonine protein kinase, putative
           similar to Pto kinase interactor 1 (Pti1)[Lycopersicon
           esculentum] gi|3668069|gb|AAC61805
          Length = 365

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -1

Query: 363 HHEASSRAPQAPPVAPRSPILQPL 292
           HH+AS  A + PPV    PI  P+
Sbjct: 37  HHQASETAQKGPPVVKLQPIEVPI 60


>At1g72110.1 68414.m08335 expressed protein
          Length = 479

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -1

Query: 504 LGVVLFPLDVKPPDILYEYI 445
           +G VL PL +KP D ++EY+
Sbjct: 326 IGYVLIPLGMKPQDDVFEYV 345


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,854,621
Number of Sequences: 28952
Number of extensions: 301526
Number of successful extensions: 1032
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1028
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1794809600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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